Cmc05g0126101 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0126101
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	GCV_T domain-containing protein
Location	CMiso1.1chr05: 3095755 .. 3099843 (-)
RNA-Seq Expression	Cmc05g0126101
Synteny	Cmc05g0126101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTATATGAAGTTAGTGGAGATGATCGTTGTCAGTTTCTTCATAACCAAAGCACAGCTAATTTTGAAAGTTTACGTCAAGGACAAGTAAGTTTTTACTAGACACACCATGATATCATATTCTAACCATGCTTGGTTAACTTTAAATTCTTTTAGAATGGAGTTGTACTATTAAAAGATTAATATTTTATGCCATTTTTTGTTAACTATAGGGGTGCAGTACTGTATTTGTTACACCCACTGCTCGGACAATTGATATTGCACAAGCATGGATCATGGTAATGCTACAAGCTTGTATTTCTCTTTGGTCATTGGTTTCCTGTATCCCAACTTGTTTCGATTTCGTTTTAAAATTCATTTGTTATGCATGCTGCTAACAGAAAAATGCCATCACATTAATTGTGTCACCAGTTACACGTGAAAGCATAATTCGGATGCTCAACAAGTAGGTGTTATTGTAAGTTTTAATTGTCCTCTCGTGGGTTTAGTGCTTTTTTTTGCTTTTACTTCTTGGTTCCATTATGTTATTTTGATACTATCCTTGCACAAGAGCCAACATGAGATTAGTTATAATGGAACATCGATACGAACTGAAAAAGCTGAGGGAAAGCCTCTCAATCAGATTTAATCTCAAAAGATGAGTAATTGGAAAAAGCTTATGATGCATTGAAATTGGGACAGTAATTTTCTGAATAATACTTCTGAAATTGAATCAATTAAAAATTGAGGGAGGAGGAGATTTCGTAGCTTCCTAACCAACTCCAAAGGTCAAAAGATATAGCCCGAGTACAAAAGGTTATAGCTAACCCAATTACAAACAACAATAAAGCCTAAGTATTATTGTATAGTTATTCTAATTACATCAATTTCCCTCCCTCTAAGAGAAAACTCACCCTCGAGTTCATGTTGAAATTTGTAGTTGGTCTGGAGGTAAATATTCGGAGATATCAGCTATATTGAAGATAGGATTGTCATGTAGATCGTCATGTAGTTCAATCTTGTAAGCGTTGTCACCAAATCTTTTCAAGATTCTAAAAGGACCGTTTTTGGCTGAAATTTCCTGTATTTTCCAGCTGGTAGTCTAGCTTTTCGAAGAAAGATTAGGACCAAATCCCCTTCTTTGAACTTTTTGAATCTTCGTTGCCTGTCGGCTTCATCCTTTCCTTGTATTTTGAATTCATCTTTTCAAGTTGGTTTGTTACTTCTTCACACAGTTTTGCTTTCCATTCAGCCATGGTTTTTATCTTCAAGCTAAGATCAACGCTAGACGAGTCGGTAGGTTAGCAAGATCGACAATTAGCCTAGGTAATTTAATATAAACAATCTCAGAGGTGACTTCCTTGTGGATCTATAATCTATTCTTCATATGGTTGTAGGCAAACTCCGCATGTTCTAAAAGAGATCCCATTACTTAGGTTTTCTCCTCCAATACAACGTATGAGATTAGCAAGTGTCCTATTTGTGAGGTTTGTTCTCTCCCCTCCCCTTCACCTTTCTCCCCAATACTCCTTCCTGGCAACTACTCTTACTGATAGAGCAGTTCATCCTTCACCTCTCGTCTTGCAATTTTTATCAACTTGGAGGAACCCATGAAAGTGGTAAACAACAAAGTAGTTAATTCCTACCTATTGCTTCTGGTTTGAAAACGGGTTATTCAACATTGAGGATGTAGATTTCAACAAAAGCCTCCAAGTCAACCATCATGGATTGGCCTAGTGGTAAAAAGTGAGACATTGTCTCAATATCTAACTAAGAGGTCATGAGTTCATTTTATGGTGGCCACCTACATAGGAATTAATTTTCCACGAATGTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGTCCCATGAGATTAGTCGAGGTGCACGTAAGCTGGACGGATTGAGAGAATAAATTCTTTCTTAGAAATGGCGAGGATTTGAGTGGAGTCACGTGATTGATGAAATTTCGTGCAACGTTAGGATGGGTTTTAAGGTGTGTCGTCCGACCAACCTCTGGTTACCCATCCTAAGTTCATATTTTCTCAGGGCAAGACAAGGAGGACTGGCAATCTTTTTTAAAAATGGTAAAAAGCTTCCTTATGAAACAACATTACTTGCTTGGCAATCTCCATTACCCCGGCAAGATACATAGATTCCCATACCAATTTGCCATGTTCAAGCTACGCGAAAAAGGTGAGGAACTAAAGTAAAAGGCTTACTCTATTTCTCGATCAGCAAAACGGAGCTTATCCCCTAGCATTCCCTTGAAAAAGGAGGGTGAGTTTTAACGAAAACCAAGGGAGAAATTTTTTTGATCTTGTGCGTGAATGAAATCAAAGAGTGAATGGGCGTGAACGAACAAAATCGAAGAGTGAATGTGGGGAGAAATCGATTTGAAGAGAGGATCGAATGAGGGTGGGGCGTGAAGGAATGAAAACAAAATCTAATAAAAATGAAAAGGGCCATGGGGGGGGGGGGGGAGCATATGTGGCAAACCCTAAAAATAAATTAAATTTTTCCCCCTTTCACTATTTTCCTTTTCTGCCTTTTTTCTTTCTATTCTTTATAGCTTGTTATCAGAAATGTTATGGTTGGATGCTACTAAAAGGCATATTTGTTGTAGTGGACCCATCCAAGTGAGTTCGTAGGTGTTCTCCCTCTCCCTATATATAGCTTGGAAATTGTATTGCCATGGACGATCCAACAAAACATGACACATGCCGATATCAAGCATATCACAAATAGTTTGATCTTTATAAAAGTTACCGATGGAAAGGGGAATTCTGCTAGTGAAGGAAAGTTTAAAATGTGGAAATGGATGCAAAGAAAGGTGATCTAAGTGTGGTAAGAAATGTCAGGAGCTGAATCATTGTTTTATTCAATTCAGGTCAGAAATGCCCCCTTGAAGGAAGGTCAGACTCAAACAGGAGCGGGTTGTAACTGCATGGAACTACAACTGAAATCCTGCTCCCTGAATGTTGGCCACTGCTCCCATGACATATGGATAATATTGGTCTCCATAACTTAGAAGAAATGGTTCATCCCGAACTGCAATATACTCGATTCGAACACTGCCTGTACCACCGGAGAAATACCTAGTGACATTATCATCTACCCAACTCTTGGCAGCTTTCAGGAAGAGTTTAAGAGCTTGAGCATTGGATTGGGAATGCTGATGGTGAGTTGAACATTGGAACTGGATAGTTTCCAGAGGACGAGGGGATTGGGATTTGGGATTGAGGAGCTTGATTTTGGAGATGTTGGAGTTTAAGAGTTCGACAACCTTGAGCAGCGGAAGAGGGTGGGATGCCACCGTGCTTCAGTTGAAGATGATGACTGAGACAGAGAAATGGTTAGAAGAGAACAAAGAAAGCCCTACAAGTTATCCAAACAACTATCCCTGGTTTATATATTCACAATAAGACACATTTTAACGTTCATACAAGAGCAATAACCAGAAATGTAGTAAGAAGAGAATAACATGAAAGTAACAAGATACTCCAGCAAATTATAGAGTGCTGGCTCTCTCCCGTCATCTATCATTCTTCAAATGATCAATCACAGAGTTCCAGCAATTAAATGTGATATCTTTCTTTCACCTTGAAACTTTCTGAAAAAAATGTTTCTTTATTTCATCTGGACTTAACAGAAAGTGGAAGGTAAAATTATAGTAATCTAGATGACTGACCAACACTGCTTTGCATAGAATTTTCCATCCACTACCTCTGCATAATACATACATAAACTGAATATTGATTGCATGGGAAAGGGATTACTACTTATTTTGATTTGCAGCATTATTCCTTGGAACACCAATGAGAAAAGGAATTGTTTATTTATTATTAATTTGTTATTACTTTTATTCTTTTGCTTTTAGAAGTTGATTTGATCCATTTATTAAACTCAAGATAGGAAAATAACATAAACTCAACATATGAATGCATGTTTGTTTTCTAGATATTCCATTTACGATTCATGACTTTACAAATGAATTTTAACCAGGTACATTTTTTTAGCTGACAAGGTAGAGATTCAAGATATTACCAATCAAACATCTTTGTTAGTGTTGGTGGGACCTAAAAGCAACCAAGTAAAATAG

mRNA sequence

ATGTATGTATATGAAGTTAGTGGAGATGATCGTTGTCAGTTTCTTCATAACCAAAGCACAGCTAATTTTGAAAGTTTACGTCAAGGACAAGGGTGCAGTACTGTATTTGTTACACCCACTGCTCGGACAATTGATATTGCACAAGCATGGATCATGAAAAATGCCATCACATTAATTGTGTCACCAGTTACACGTGAAAGCATAATTCGGATGCTCAACAAGTACATTTTTTTAGCTGACAAGGTAGAGATTCAAGATATTACCAATCAAACATCTTTGTTAGTGTTGGTGGGACCTAAAAGCAACCAAGTAAAATAG

Coding sequence (CDS)

ATGTATGTATATGAAGTTAGTGGAGATGATCGTTGTCAGTTTCTTCATAACCAAAGCACAGCTAATTTTGAAAGTTTACGTCAAGGACAAGGGTGCAGTACTGTATTTGTTACACCCACTGCTCGGACAATTGATATTGCACAAGCATGGATCATGAAAAATGCCATCACATTAATTGTGTCACCAGTTACACGTGAAAGCATAATTCGGATGCTCAACAAGTACATTTTTTTAGCTGACAAGGTAGAGATTCAAGATATTACCAATCAAACATCTTTGTTAGTGTTGGTGGGACCTAAAAGCAACCAAGTAAAATAG

Protein sequence

MYVYEVSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQVK

Homology

[Close]

BLAST of Cmc05g0126101 vs. NCBI nr
Match: TYK13394.1 (putative transferase [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 7.8e-46
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 131 VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 190

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 191 ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQI 229

[Close]

BLAST of Cmc05g0126101 vs. NCBI nr
Match: XP_004140110.1 (putative transferase At1g60990, chloroplastic isoform X1 [Cucumis sativus] >KGN47936.1 hypothetical protein Csa_003267 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 131 VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 190

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIF+ADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 191 ESIIRMLNKYIFVADKVEIQDITNQTSLLVLVGPKSNQI 229

[Close]

BLAST of Cmc05g0126101 vs. NCBI nr
Match: XP_031743503.1 (putative transferase At1g60990, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 131 VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 190

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIF+ADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 191 ESIIRMLNKYIFVADKVEIQDITNQTSLLVLVGPKSNQI 229

[Close]

BLAST of Cmc05g0126101 vs. NCBI nr
Match: KAA0057343.1 (putative transferase [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 8.6e-45
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 8   GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 67
           GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES
Sbjct: 18  GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 77

Query: 68  IIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           IIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 78  IIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQI 114

[Close]

BLAST of Cmc05g0126101 vs. NCBI nr
Match: XP_038887599.1 (putative transferase At1g60990, chloroplastic [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKN ITLIVSPVTR
Sbjct: 130 VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNGITLIVSPVTR 189

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIFLADKVEIQDIT QTSLLVLVGPKSNQ+
Sbjct: 190 ESIIRMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQI 228

[Close]

BLAST of Cmc05g0126101 vs. ExPASy Swiss-Prot
Match: Q681Y3 (Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g60990 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-37
Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDR  FLHNQ+TANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T 
Sbjct: 126 VSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTC 185

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           +SII MLNKYIF ADKVEI+DIT QT L  L GPKSNQ+
Sbjct: 186 QSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQI 224

[Close]

BLAST of Cmc05g0126101 vs. ExPASy TrEMBL
Match: A0A5D3CQT8 (Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00010 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.8e-46
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 131 VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 190

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 191 ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQI 229

[Close]

BLAST of Cmc05g0126101 vs. ExPASy TrEMBL
Match: A0A0A0KJI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G417880 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.4e-46
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 131 VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 190

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIF+ADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 191 ESIIRMLNKYIFVADKVEIQDITNQTSLLVLVGPKSNQI 229

[Close]

BLAST of Cmc05g0126101 vs. ExPASy TrEMBL
Match: A0A5A7UN60 (Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G001980 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 8   GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 67
           GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES
Sbjct: 18  GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 77

Query: 68  IIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           IIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQ+
Sbjct: 78  IIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQI 114

[Close]

BLAST of Cmc05g0126101 vs. ExPASy TrEMBL
Match: A0A6J1DYD6 (LOW QUALITY PROTEIN: putative transferase At1g60990, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025359 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSG+DR QFLHNQSTANFESLRQGQGCST FVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 130 VSGEDRYQFLHNQSTANFESLRQGQGCSTAFVTPTARTIDIAQAWIMKNAITLIVSPVTR 189

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESIIRMLNKYIFLADKVEIQDIT  TSLLVLVGPKSNQ+
Sbjct: 190 ESIIRMLNKYIFLADKVEIQDITKHTSLLVLVGPKSNQI 228

[Close]

BLAST of Cmc05g0126101 vs. ExPASy TrEMBL
Match: A0A6J1EI20 (putative transferase At1g60990, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434553 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSG+DR QFL NQSTANFESL QGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR
Sbjct: 119 VSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 178

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           ESII+MLNKYIFLADKVEIQDIT QTSLLVLVGPKSNQ+
Sbjct: 179 ESIIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQI 217

[Close]

BLAST of Cmc05g0126101 vs. TAIR 10
Match: AT1G60990.1 (Glycine cleavage T-protein family )

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDR  FLHNQ+TANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T 
Sbjct: 126 VSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTC 185

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           +SII MLNKYIF ADKVEI+DIT QT L  L GPKSNQ+
Sbjct: 186 QSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQI 224

[Close]

BLAST of Cmc05g0126101 vs. TAIR 10
Match: AT1G60990.2 (Glycine cleavage T-protein family )

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDR  FLHNQ+TANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T 
Sbjct: 126 VSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTC 185

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           +SII MLNKYIF ADKVEI+DIT QT L  L GPKSNQ+
Sbjct: 186 QSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQI 224

[Close]

BLAST of Cmc05g0126101 vs. TAIR 10
Match: AT1G60990.3 (Glycine cleavage T-protein family )

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 6   VSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTR 65
           VSGDDR  FLHNQ+TANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T 
Sbjct: 126 VSGDDRAHFLHNQTTANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTC 185

Query: 66  ESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQV 105
           +SII MLNKYIF ADKVEI+DIT QT L  L GPKSNQ+
Sbjct: 186 QSIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQI 224

The following BLAST results are available for this feature:

BLAST of Cmc05g0126101 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13394.1	7.8e-46	98.99	putative transferase [Cucumis melo var. makuwa]	[more]
XP_004140110.1	1.7e-45	97.98	putative transferase At1g60990, chloroplastic isoform X1 [Cucumis sativus] >KGN4...	[more]
XP_031743503.1	1.7e-45	97.98	putative transferase At1g60990, chloroplastic isoform X2 [Cucumis sativus]	[more]
KAA0057343.1	8.6e-45	98.97	putative transferase [Cucumis melo var. makuwa]	[more]
XP_038887599.1	1.1e-44	96.97	putative transferase At1g60990, chloroplastic [Benincasa hispida]	[more]

BLAST of Cmc05g0126101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681Y3	2.4e-37	78.79	Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cmc05g0126101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQT8	3.8e-46	98.99	Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496...	[more]
A0A0A0KJI9	8.4e-46	97.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G417880 PE=3 SV=1	[more]
A0A5A7UN60	4.2e-45	98.97	Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280...	[more]
A0A6J1DYD6	1.1e-42	93.94	LOW QUALITY PROTEIN: putative transferase At1g60990, chloroplastic OS=Momordica ...	[more]
A0A6J1EI20	2.1e-41	92.93	putative transferase At1g60990, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Cmc05g0126101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60990.1	1.7e-38	78.79	Glycine cleavage T-protein family	[more]
AT1G60990.2	1.7e-38	78.79	Glycine cleavage T-protein family	[more]
AT1G60990.3	1.7e-38	78.79	Glycine cleavage T-protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006222	Aminomethyltransferase, folate-binding domain	PFAM	PF01571	GCV_T	coord: 2..104 e-value: 2.3E-12 score: 46.8
IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1	GENE3D	3.30.1360.120	Probable tRNA modification gtpase trme; domain 1	coord: 1..105 e-value: 4.8E-24 score: 87.1
None	No IPR available	PANTHER	PTHR13847	SARCOSINE DEHYDROGENASE-RELATED	coord: 6..103
None	No IPR available	PANTHER	PTHR13847:SF262	MALATE:QUINONE OXIDOREDUCTASE	coord: 6..103
None	No IPR available	SUPERFAMILY	103025	Folate-binding domain	coord: 2..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0126101.1	Cmc05g0126101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding