Cmc04g0121341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0121341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr04: 36404801 .. 36422170 (-)
RNA-Seq Expression	Cmc04g0121341
Synteny	Cmc04g0121341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGAGGCAAATCAACTGCACGCCTGATCGCATTACTTATACTACTCTGCTACACGGGCTCATAAGATGGGGTAAAATTCGAATAGCCTTGAAGACATACAAGGAAATGGTTAGTTCAGGCCACAGTATAGAACCAAAAATGATGAATACCTCCATCAGAGGGTTATGCAGGACATCCTTAAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGACGACTTTCAAGTTATTGATCGGAGTACATATGCCCTGCTGATCCAAGCACTATGTTCAGCAAACATGATTTCGGAGGCACTTGCAAATTTGCATCATATGATTGAAAAAGGCTACCCTCCAACACCGATTATCATTGACGTTATTGTTCAAACACTTTGTCACAGGGGAAGCATCGACGAAACATCGTGTGTTTTGGGGCATGGAATCCCTTTCACAACGATTTCTTTTGACTTGTTAATGCATGAGCTTAATACACAGGGAATGTATATCAGTGCTTGAAATGTATATGCTTTGGCTTTGAAACAAGGTGATAACCCCACCAAGTCCCCGAGATAAGCAAACATATATCAATTGCTGTAACGCCCCGAAAATTTAAGGTAAAATTTTTCTCGTTTTATGAAAAATGCAAGTTGATATAATAATAATATAATAGTAATTATATTATTATTATTAATGATTATTTTATTGGTTATAATATTAATATTATAAATATTATTATTATTAATATTTATTTAATTGTTATAATATTAATATTATATATTATTATTATAAATTAATATTACAGAAATATTTTTATTTATAAAACAATAAAATAAATTATTTATTTATTTAATATTAATATTATTAATATATCATTATTATTACTTTATTATTATCATTATTATTTATATTTAATATATATCATTATTTAAGTTTTAAATTATTAATATTATAAATTATTAAGAATTATATTTATATATATATATATATAACAATTTTTTTTTTTAAAACCCTACCTCGCGCGCCGCCTAACCCCCCCCCCTCGAAATTTCTTTTCTCTCCCGCCGCCGCCCATCCATTTCCTTCTTCTTCTTCTCCCTTCCTCGCCCGTCACCGCCAGCCATCTCTCCTTCGTTTTCTCCTTCTCCTTCGTGCTCTTCTCCATCTCAGCCACCATCACCCATCGTCTCCATCTCCGTCGGCGTGTGTAGGTTCACCGGTCGTCGTCCGCCGCGGCTCCCCATCCATTTCCGATTTCCTTCTCGGCCTCACACAACGGCAGATCTGCCGCCGCTCATCGCCGCTCCACGAAACAGCCAGCTCCGTTCCTCGTGCTTCGTCCGCGAAGCGCCGCCGCCGTTGTTCGCCGGAAGAAAGGATCACCGAAACCGCGGCTACCATTTTCTTCGTCCAACCCGACCCGGCTCCAAGTCGGCTGTCCAAGCCGAGCCGAGATCGCTGCCAAGCCGAGCCACAATCCCTGTTCAAGCCGAGCCGCCAGCCGCTTCAAGCCGAGCCGCCAGCCGCTTCAAGCCGAGCCGCCAGCCGCCAGCCGCTTCAAGCCGAGCCGCCAGCCGCTTCAAGCCGAGCCGTGAGCCGAGTGAGCCGAGCCGCGAGCCGAGTGAGCCGAGGCGCGAGCCGAGTGAGCCGAGCCGCGAGCCGAACCAAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCGAGCCACCTAAGCCTTCTTTCCTCCACTTCGGTTCACGGTGAGTCTTCGGTAAGGATTGTTTTGATGAATTCCCTAATGTTACCTCGTCCGATTCGAGTTTGAATGTTGGATTAAGATATGGCCCTACTTTTCTCCCTTGAAGGTAGTGCAGAGTTGACGCTTAAGTTCTCGGGTTCCGCGGCAGACCTAGTTGGAGTTAGCTTCCTTTCCTTGGGTAAGTCAACGGATGTCGCTTCCGACCTTTCTTTAACGACTGCTACAAAAAAATCTTCAACTAAAACTTTCGTGTTCGCTAGGTAGATCTGTCGAGCGCGGTTTTCGATCGAGGGGTATAACCGAGTTTCAGGTAAGGGTTTTCCTACTACTGGACCCCGAGTCCAGGCTAAGACCGTAGTAATCCACAGGGGATTACACGTTAGTGACTGTACTGAATATCTGTATGCGTGTTGACTGTTAAGTACTGATATTATTTTCGGTCTGATGAAAATATACTGTGACTGCTGTTGTGGATTGAAATTATATGTTGATGGACCTTAAAGTTACGGTTAGTATGTATTAAACTCTGGTCTGGATGTGGTTCATGGAGTTTGGATGGGGAAAGACAGTGAGTCCGGTTTTGGTTGATTAGTCGATTGGGCCTAGGGTTTCCCTATTGGTGTACGAATCGGTAATGCATATAGCAACTGAGGGTGTAGATGTTTAGACCTATACTATCTGACTGACAAAGCCTATGGCGGAACTGTAATAGGAATGCCGTTGTGATGTGACTGATGTAGATAGTTTGGTAAGGGCTGAGGGGTAACGGTTAGCTTCATCTATGGGGTAGTGTACCTTACTGATGTGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACCGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCGTCCTTCGGGAGCACTAGACTGATATGTGCATCCTTCGGGAGCACTAGACTGATATGTGCGTTCTACGGAACCACTAGACTGTTATGTAGGGTACCCCGAATAGGAAGTTAACTGTTGTTCCCTAACGGGCCCAGTAGTGGGTCCCTTACTGGGTATGTTTATACTCACCCTTTCTCTTCTTTAACTTTCAGGTAGGGTTACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGATGCGTGAAGGCCATATGGACGCGTCCGTTTTTCTTTCGCTTCCGCTATGTTTTTTGTCAGAATATTTTGATTGTGATTTTTGGACTGGTGACTTGACATTTTATTTTGTGACTTTTTGAGTTATTAAAAATAGGGCCCGAAACTGTCTTTTGTAAGGTTTATAATGTTTTACTGAATCGTATCTGGTCTGTTTTAAATTTTATTTTGAATGGTCGAGTTTTGGTATTTGGTAGTGACCTCAGCTTAGTCCGGAAAAGTTGGGTCGTTACAGTTGGTATCAGAGCCTAAGTTTTAGGTTCTGTAGACTGACTTATAATGTGAGTCTGTGTTTTGTGTCCTTATGGCTGAAACGATCCTTGCCGCTCGTCAGGTACGCTCTCATGAAAGTATATGTATAACTCTACATGCATTACCTTACCTAAGTTAAACTGCAATTTCAATTACCAATTTATGACTTAAGGAATTGTTGGTGGTTATTAGGAAAATGCCACCAAGGAGAGGTGCACGAAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGTTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATATGATTATGCAAATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGTTCCTGCCCCAGCCCCGGCTCCGGTACCAGTTGCACCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGAGCTCAGATGTGGCTATCGTCCTTGGAGACCATATTTCGTTACATGAAATGCCCTGAGGATCAGAAAGTGCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCCTGGTGGGAGACTACAGAGAGGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCCAGTTTGAGAGATGCCAAGCGGCAGGAGTTTCTGAACCTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAATTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACTGAGGCGGCCAGAGCTGACAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCCAACTCGTCTAAGACCGCTGGTAGAGGTTCGACGTCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAATACCACAGCGGAATTTCAGACCAGGTGGTGAGTTTCGCAGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACCTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGACAGATGCCCGTTGAGAGTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAGGACTGAGGCAGAGAAGGCGGGCACAGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTCATCTCTTCCGCATTTGTGTCGCATGCCCGCTTAGAGGTTGAGCCCTTACACCATGTTCTGTCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAGGCATGTCAGATTGAGTTAGCAGGCCATGCGATCGAGGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCCCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTTAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGATTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCAGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGATGGGTCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAAGTAACGGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATATCATCAGCTGAGGATTAAGGAGGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCGGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGGGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACAAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTCCTCACGGTACCCGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAAGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAAGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGACTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTGTCACATTCGGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTACGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTATTTGAGGGACGCCTCTGTGTTCCGTCAGATGGTGTGATTAAGACAGAATTATTATCTGAGGCGCACAGCTCCCCATTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAGCATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGCCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCTGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCTGAAGGGATGAAAACCCTTTACAGCGGAAAATATACAGAAACTCAATTTTAATTAGAACCTTAAAAATACCAATACATTGGCATAAAATATTGATTAAACATGCTTTAAAAAATTACAGAGAATAAAACTTACGCTCGTTGACGACTCTGAATCTGCCAATCACCAAATTTTTGGGGCACCACCACTTGAAAACCTTCCTATTCTCTGATTGAGATGGTTTGTGGGAACCAAAATTGGAATAAGGGAATGGAGAGATTTTTTTTTTTAGAATGGATAGACTTCTTCGCAGAACTCTCTCCCGTTTAAGAGAAAAAAAATTTGTTACGCAAAAAATTCCCTCTTCTTCAGTCGGAAGAAGAGGGAAGTTAGAGAGAATAATTGGGAACGTGGGAAAACCACCCACGTTCCTTATTAATTTAATAAATTAATATTAAATTAATATTAATTAATTAATTAATTATATTAATTAAATAAATAATTAAATAATTAATAATTCATTTAAATCTTATTTAAATGAATATCTCTCACATAACCTATAGTTTTAATTTAATTAATTTAATTAAATCAAATTTAATTAAATCAAATTAAACAAAACTATTAATTAATTCTCCAATTAATTAATTTCTAAATTAAATATCTTATATTTAATTTAATCCATAATTTGAATCATATTCAAATATAAATTTCTCTCATAACTTATAGTTTTAATATGTATCATATACACATTAAATTTTAACTTATAGTTTTAATATGAATCTAATTCACATTAAACTGATATTTGAACTTATTCAAATATTTTATTCTCTCATAATTTAATTTTGAATCATATCCAAAATTAAATTTATATAATAAAGTCTAATTAAAATATAAACTTTATATTATAATGTATCAATATACATTATATTAATTCCCAAAGTAAATTTGAACATTTCAAATTACAACCAATATAAATAAATCTCATTACTCTTTATGAGCTAGGAAGGGGACCTAATGGACCTACAGATCAGAAGCTACAACGATATGAGATTAATTGGCTAAACTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTACACTCCACTAAAGACTCACAGCTGAACTCTTCTCACTGTAGATATATTTCTGTGTCCACGGATATAGACCAATACCAGTAAGTTAGTCCTTCACAAGTGTTCGTAACTCCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTAGTCCTTAAATACCAGTGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCACTAAACAGAAACCCCTCTCGTGCCATTGAGAGGGTAGGGCCCTTTGTTCAAGTCTCGGAGACACCATTTAAGGGAACACTTATCTACTTACCCTAAAGGTGGGAAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCTCCACTCGGTATTGTCCCCAAAATGATAAGAATATTGAGTCGGCAATCTGGCCACTCTCACTCGTATAAATCAAAGGACAATCCCTCGCAAACAGGAGTTCATAATACACTCAGGATTAAGACTAAGTTACCTAGGTCATCCTAATGAAATAGCAATCCAACTAGTTAACGGAGTTACATCTAGTGATTACTATTTCGTGGTCCAGTCTTATGCAAACTCATTGCATAGGATACCCTCACTCGCATGTCACATACATGAACGCATTTGATCAATGTGTCTGTATCAAATACAAAGTGAGCCGTATCCATAGTGTTAACAGGATAAGGTACCCAACCTTAACCCTATACTATAGACTCTTTAAGCTGATCTTGAACATTAATCCCTGTATGTCTCTACATACTGTTCAAGACTCATCAAACAGCTTAGGATGTTAGTTTATTGGATTTGGGTTATTAAGACAAAACTAATAAAATAATCAATAACACTTATTGAAATTAAATAATAAAATACTTTATTAATGACGGTCAATTGATTATATTTACTATCTACGAGTTTTAGGACATAAAACCCAACAAACTCCCACTTGGACTAAAACTCTAGTCCTTATGGGATGTACATAGTAGAGTAATCCTCAAACATTGGAAATGGTAAAATGTACAAGTATATTACATAAAACGTATATATACAAATACAATAAACTAGGGCATCATCATACCCATTACACATCTCCCACTTGCCCTAGGTTACCTAATGTACATATCTCGTAGACCTAGACTTTCTAGATGACCCTCGAACACTTTAGCCGTGAGAGTCTTCGTAAATGGATCAGCAATGTTGTGCTCCGAAGCGATCTTGGTGACGATCACATCCCCTCGTTGCACAATCTCCCGTATCAGATGATACTTCCTCTCTATGTGTTTCCCTCGTTTATGGCTGCGAGGTTCTTTAGAATTGGCTACTGCCCCACTGTTATCACAATATAGAGTGATGGGCAAGTTCATATTTGGAACAACTTCCAAATCATGTAGGAACTTCCTAAGCCAAACTGCTTCTTTTGCTGCTTCACAAGCAGCGACGTATTCAGCCTCCATTGTAGAGTCTGCAATGCATCCTTGTTTGATGCTACGCCATACTACAGCTCCCCCATTTAGGGTGAACACTGATCCCGATGTGGATTTCCTAGAATCCTTATCGGTTTGGAAATCAGAATCAGTGTATCCTGTAAGGATCAAATCCTTAGCTCCATACACAAGCATGTAGTCTCTCGTTCTCCTAAGATACTTGAGAACAATTTTAACCGCCGTCCAATGGTCTAACCCTGGGTTGGACTGATACCTACTGACTATTCCCACTGCATAACAAATGTCTGGCCTAGTGCAGAGCATAGCATACATTAAGCTGCCCACAGCTGAGGCATAGGGAATACGTCTCATATCCTCAACTTCTTGAGGTGTCTTAGGACTCTGTTCCTTAGACAAGTGAACTCCATGCCTGAAAGGTAATAAACCCTTCTTAGAGTTCTGCATCGAATATCGAACCAACAATTTGTCGATATAGGTTGCTTGAGACAGTGCTAGCGTTTTGTTCTTACGATCCCTTATGATTTGGATCCCAAGAACATATTGTGCCTCTCCTAAATCTTTCATTTGGAATTGGGCTGCTAGCCAAGCTTTAACGTCAGTAAGGTAACCCACATCATTCCCAATGAGGAGGATATCGTCCACATAAAGTACTAAGAAAGCTACTTTTCCTTTGTTGATTTTCTTATATACACAAGGTTCATCAACATTCTGGTCAAAACCATAGGATTTGATTGCAGTATCAAACCTAATGTTCCAAGATCTTGATGCTTGTTTCAACCCATAAATGGATCGATTCAGCTTGCAAACTTTTTGCTCTTGACCTTGGGTTATGAACCCTTCGGGCTGAGACATAAAGATACTCTCTTCAAGAGAGCCATTCAGAAAAGCAGTCTTGACATCCATTTGCCATATTTCATAATCATAAAATGTGGCGATGGACAAGAGAATCCTTATAGACTTTAACATAGCAACAGGAGAGAAAGTTTCCTCATAGTCAACCCCTTCCCTTTGGGTATACCCTTTTGCCACAAGTCTAGCTTTAAAGGTCTGTACCTTCCCAGCTGAATCTCTCTTTCTCTTATAGATCCATTTGCACCCTATAGGTTTTACCCCTTCAGGTAGATCTACAAGCTCCCACACTGAATTGAAGTACATAGACTCCATTTCAAGGTCCATGGCTTTGACCCATTGGTCCTTATCTACATCATTCATTGCCTGTTTATAGGACAATGGATCCTCAACACCATCATCTGGTATGACAACTTGAGTTTCAGTTAAACCCAAATAGCGGTTAGGTTGTGATACAACCCTCCCACTGCGTCGAGGCATTCTCAACGATTGAGAAGGATGAGATTGACCTGATGTGGTGGTTTCATCAACCCTTGATGAGGGACCAACTTCATCAACAACCCTTGTTGATTCATCAGTAGCTTCACTTAATACTAATTTGCTTCGTGGTTTATGATTTCTCATGTGGTCTTCTTCCAAGAAAGTAGCATTTGTCGATACAAACACTCTATTTTCTTGTGGATCAAAGAATAGACCACCTCTCGTCTCTTTAGGGTAACCAACAAATTGGCATAACCTTGAACGAGGTTCCAACTTCTTGGGATTTGTCACTAATACGTGTGCTGGACAACCCCAAATTCTGAAATGACTTAAACTAGGTTTACGTCCTCTCCATAGCTCGAAAGGTGTTTCAGAAACACTCTTCGAGGGAACATTGTTCAAGATATGAACTGCAGTCTCTACTGCATACCCCCAAAACGAGCTAGGCAATTGAGCGTAACTCATCATTGAACGAACCATGTCTAACAAGGTTCTATTTCTCCTCTCTGATACACCATTTTGTTGAGGTGTACCAGGTGCTGAGAGTTGGGATTGGATTCCATGTTCTATCATATAGTCCTGAAATCTCAAATCCATGTACTCTCCACCTCGATCAGATCGAAGTATTTTAATCTTTTTACTTAATAGATTTTCAACTTCAGTCTTATACTCCTTGAACTTTTCAAGAGCTTCAGACTTATGCTCCATTAAGTATAAATAACCATACCTAGAATAATCATCTATAAAAGAGATGAAGTATTCAAAACCCCCTCTAGCTTTTACATTCATCGGACCACAGAGGTCTGAATGTATAAGTTCTAAAGGCTCTTTGGCTCTATAACCTTTTCCAGTAAAAGGTCTCTTTGTCATTTTACCTTCAAGACAAGATTCACATGGAGGTAATGAAACATCTTTTAACTTGTTTAGAAGTCCATTCTTTACCAATCTCCCGATCCGATCGAGATTTATGTGACCTAATCTTAAATGCCAAAGATAGGTATTGTTATTTGGAGAAATTCTTTGCCTTTTATTTTGAGTATTAGCAGTTCTAAACATCTCATGATTTAAAACTGCTTTTGCTTCATTAGGTCTTAATACATACAAGTTGTTTTCAAGCTTAGCTGAACAAATATGTACACCATTCTTATAAATGAACGCTTCATTCATAGAAAAATTAATTGAGTACATATGTTCAATAAGACAAGAAACAGAAACTAAGTTCCTTTTAATTTTAGGAACTATGTACAAGTTTTCCAAAAACATGAATTTATTTCCGAAAAACAACTTAGCATCTCCCACTGCACGAGCTGAAATAACATCTCCCGTTCCAACCTTGAGTGTCATCTCACTGTCCTCAAGCTGCTTGAAGGAACTAGTTTCTTGTAAAGAAGAACAAACATGGTTAGTGGCCCCTGAATCAAGTATCCAGGCATTTTGGTCATTTTCCACTAAACATGTTTCCAAGACAAGTAAATCATATTTACCTTCCTTTTCTTTCTTCTTAACAAGGTACTTAGGGCAATTTGTTTTCCAATGCTCATCAACATTGCAGTGAAAACATTTCCTCTTGATGGCTACCTTAGCCTTCCCTTTGTCCTCAACAGCAATAGTAGGACCTTTCCCTTTCCCTTCTTTCCTCTTTTGAATTTTCTCAGATCCAGAAGGTGAAGGTACAAACCTCCTCTTAGAATGGGCAACATTTGCCTCTTGTTTGATCTGAATGGACGGTTGTCCAAACATCTCTCTAAGAGAGTCCATGATCTGACGTGCAGTGACCATGATCTCATGTTTCTTGCTTAGTATGTCAGACATACTAGCCAAGATGTGGAGGCGAGCCTTGTCATTGGCCTTTGTCCAACGGTCATATGCATCCCTAACACTTTGGGATGCATGTTTAGTGGGAAAGGAGGACATTCCTCCATTAAGACGAAGCTTAGATCAACGATAACTAAAATCATATTCAGTTTCGATTTCCACGTCGCATAATTTTCACCGGTTAATTGATCTTTTTTAAGCAATGCAATAATTGAGGAAGACATGCTGAAATAGCAAACAATTGACCATATTAGTTATCTTTGTCTTAACCCATTACATAAAACAATCCAATCAATTCAGCAAAAACAAACAATCAAAGAACCCTAATAAAACTAATGATTTAGTTTTTGCAACGATACTTCAGAAGTTTAGAACAAAAATCACCGAAGGGTGATCAATTACTCTTCTTCTGAATTGAGACAATCTCAACTAATTACTAATACCAGAATAACTCTTATTCCTATAGTTCTTAGCTATCGTTGTTCGGTCAAGGATTCATTAACTAACTTAATTCATCCCGTAAGTGTGACCCTACCATTTTCAGATCCCAGAGGTACGCTTCAACAGGCTACTGTTTAGGAAAGACAACTGTTGAAGATTAACCTAAGAAATCCTATCCATTTCTGGAGTTTGCGATGTTCCGACTTATATGATCAAGCCCTCCGAAGGGATGGTCGCTCCAGGACGACACGCAGGCGGATCATAGAAATCTCACGGTGCAACCTAATGGAGGAGACCGTAGGATACGTTGACACGCGTCCTTCTCCCACTTACTATGAACATTTCCCCTATTCACCTTGTTATTGACCCATACAAACACTTTCCGAAAGGAGGCCGCGCCCAGGGCGACACGAAGCCGAGTATGGATCTCACGTGTGAACTCTTAGGGACGTGAAAGCAAAAATAAAAATTGATATATCATATATACCATTTTTCTCCCACTAAAATGTTCTATTAATTTAGGTTTAGTTGCACTTAGCTAAATTCCGGCTAAATGAATCTAACTAAGTCTATTCTTATTATAACACTTATAATAAAACTTTACACTAAAGTTTCTAGGTGTATTAAACCATTTAATTTACCTAGTGACATCTTATGCTAATAGGAATAAGGTTAATTCAACGCCGGTTCCGGGTCAGTTCCCAGGTAGGAGGTGTTCCGTAAACCGTCAACTTAAGTACCCCCAGCCTTAGACAGAACTTTACCGGTGGAGTTCCCTTATAACCTTAAATCCTATTTGTCCTATTTAGTTTCATTAAACTAAAAATAAGACTTAATTCTAATCCTATTAGAATTAATGTGATCTTAGGTCTATTTAATTTTAAACATGTTAAAATTAAACCAAATTAATCCTAAGATCCTACGTTTGCATGCAACTCTTTATTATAGGTTGACGGTTTCTAATAATCAAATTTTATAACTATTATAAAATTAGTTAATTAGCCCTATAATCATACATACTATGGTTTAAATAATTAAAAACAAATTATAATTAAATAAAACCATATTACATGCATACATTATATTAATATAACAATTATATTAAACTATGGATGTAATATGCACAATGCAAATTAATTTTCATCTTTTATTAATATAACAATTATATTAAAAAAATATGAAAAACAATCAAGCATACACAATACATTAATTTAAATATAACAAATTATATTTAACTAAGTAATGTCATGCATCATGCTTATTCAATTTCATATATTTAAAATATCAACATATTTTAAATTACTCATGAAATTCATAATCATGCATTAAAACCATACATTATAACATTTATAATATATAAAAATGCATGAACATGCTTAACCTAAGGTGGGATTCATCTAAATGACATCCATAAAGCATTAAATAACAATTGAACCTGTAAAATTGGCCTCTAGGATAAAATAAAGCAATAATTACAATAATAAAGCCTTAAAAAATCCTAAAAGTGCTTTCAAAGCTCCAAAACCGGCCTCAAAACCTTCAAAAAACTTCAAACCGGCTAAAAAATGCTTGAACCGGCCTAAAATAGGAAGAACCGGCCCAAAACCTCTTGAACCGGCACCATATGAAAAAATCGGAGCCGAACCGAGCCGACCGCGCCGAGCCGTCCGTACAGCCGAGTGAACCGAGCCGTCCGTACATCCGAGCCGAGCCGTCCGTACACCACGAGCCGAGCCGTCCGTACACCCGAAGCCGAGTCGTCCGTACACCCCGCCGAGCCGTCCGTACACCCGAGCCGTCCGTACAATTGCCGCCGAGCCGAGCCGCGGGCTCCGTCCGTACATCCAGTGACGTCACGATGACGTCATCCCTTCTTCAACCTCCAGCCGCGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGGTTTCCGTACAGAATCGAAAAACTCTCGTTGATGGCCTTCCGGGTGTCCGTTTTGGGCAAATTTGGTGTCAAAAAACTCAGAAAAACACCCCGAATCCAAAAATTGGACTCTAAATTACAGATTTACAAATTAAAATGCCCAAAAACGCAGGGGCCTTTACATTTTGATCTTATCAAAACAGTAAATCTATGGCCAAAATTACAGAAACATTCAATTGCAAAAACCACATTCATAATGCAGAGATCCCACCTAACCAATGCAAATTTTTAAAATTCTCAATTAAAACTGAGATGGCTCTGATACCAATTGAAGGGATGAAAACCCTTTACAGCGGAAAATATACAGAAACTCAATTTTAATTAGAACCTTAAAAATACCAATACATTGGCATAAAATATTGATTAAACATGCTTTAAAAAATTACAGAGAATAAAACTTACGCTCGTTGACGACTCTGAATCTGCCAATCACCAAATTTTTGGGGCACCACCACTTGAAAACCTTCCTATTCTCTGATTGAGATGGTTTGTGGGAACCAAAATTGGAATAAGGGAATGGAGAGATTTTTTTTTTTAGAATGGATAGACTTCTTCGCAGAACTCTCTCCCGTTTAAGAGAAAAAAATTTGTTACGCAAAAAATTCCCTCTTCTTCAGTCGGAAGAAGAGGGAAGTTAGAGAGAATAATTGGGAACGTGGGAAAACCACCCACGTTCCTTATTAATTTAATAAATTAATATTAAATTAATATTAATTAATTAATTAATTATATTAATTAAATAAATAATTAAATAATTAATAATTCATTTAAATCTTATTTAAATGAATATCTCTCACATAACCTATAGTTTTAATTTAATTAATTTAATTAAATCAAATTTAATTAAATCAAATTAAACAAAACTATTAATTAATTCTCCAATTAATTAATTTCTAAATTAAATATCTTATATTTAATTTAATCCATAATTTGAATCATATTCAAATATAAATTTCTCTCATAACTTATAGTTTTAATATGTATCATATACACATTAAATTTTAACTTATAGTTTTAATATGAATCTAATTCACATTAAACTGATATTTGAACTTATTCAAATATTTTATTCTCTCATAATTTAATTTTGAATCATATCCAAAATTAAATTTATATAATAAAGTCTAATTAAAATATAAACTTTATATTATAATGTATCAATATACATTATATTAATTCCCAAAGTAAATTTGAACATTTCAAATTACAACCAATATAAATAAATCTCATTACTCTTTATGAGCTAGGAAGGGGACCTAATGGACCTACAGATCAGAAGCTACAACGATATGAGATTAATTGGCTAAACTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTACACTCCACTAAAGACTCACAGCTGAACTCTTCTCACTGTAGATATATTTCTGTGTCCACGGATATAGACCAATACCAGTAAGTTAGTCCTTCACAAGTGTTCGTAACTCCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTAGTCCTTAAATACCAGTGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCACTAAACAGAAACCCCTCTCGTGCCATTGAGAGGGTAGGGCCCTTTGTTCAAGTCTCGGAGACACCATTTAAGGGAACACTTATCTACTTACCCTAAAGGTGGGAAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCTCCACTCGGTATTGTCCCCAAAATGATAAGAATATTGAGTCGGCAATCTGGCCACTCTCACTCGTATAAATCAAAGGACAATCCCTCGCAAACAGGAGTTCATAATACACTCAGGATTAAGACTAAGTTACCTAGGTCATCCTAATGAAATAGCAATCCAACTAGTTAACGGAGTTACATCTAGTGATTACTATTTCGTGGTCCAGTCTTATGCAAACTCATTGCATAGGATACCCTCACTCGCATGTCACATACATGAACGCATTTGATCAATGTGTCTGTATCAAATACAAAGTGAGCCGTATCCATAGTGTTAACAGGATAAGGTACCCAACCTTAACCCTATACTATAGACTCTTTAAGCTGATCTTGAACATTAATCCCTGTATGTCTCTACATACTGTTCAAGACTCATCAAACAGCTTAGGATGTTAGTTTATTGGATTTGGGTTATTAAGACAAAACTAATAAAATAATCAATAACACTTATTGAAATTAAATAATAAAATACTTTATTAATGACGGTCAATTGATTATATTTACTATCTACGAGTTTTAGGACATAAAACCCAACAATTTCATTACAGGGCTACCGAGAACTCTGAAGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAGTCAGCGCACTTTGTTCCGGGTAAATC

mRNA sequence

AATGAGGCAAATCAACTGCACGCCTGATCGCATTACTTATACTACTCTGCTACACGGGCTCATAAGATGGGGTAAAATTCGAATAGCCTTGAAGACATACAAGGAAATGGTTAGTTCAGGCCACAGTATAGAACCAAAAATGATGAATACCTCCATCAGAGGGTTATGCAGGACATCCTTAAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGACGACTTTCAAGTTATTGATCGGAGTACATATGCCCTGCTGATCCAAGCACTATGTTCAGCAAACATGATTTCGGAGGCACTTGCAAATTTGCATCATATGATTGAAAAAGGCTACCCTCCAACACCGATTATCATTGACGTTATTGTTCAAACACTTTGTCACAGGGGAAGCATCGACGAAACATCGTGTGTTTTGGGGCATGGAATCCCTTTCACAACGATTTCTTTTGACTTGTTAATGCATGAGCTTAATACACAGGGAATGTATATCAGTGCTTGAAATGTATATGCTTTGGCTTTGAAACAAGGTGATAACCCCACCAAGTCCCCGAGATAAGCAAACATATATCAATTGCTGTAACGCCCCGAAAATTTAAGGGCTACCGAGAACTCTGAAGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAGTCAGCGCACTTTGTTCCGGGTAAATC

Coding sequence (CDS)

ATGAGGCAAATCAACTGCACGCCTGATCGCATTACTTATACTACTCTGCTACACGGGCTCATAAGATGGGGTAAAATTCGAATAGCCTTGAAGACATACAAGGAAATGGTTAGTTCAGGCCACAGTATAGAACCAAAAATGATGAATACCTCCATCAGAGGGTTATGCAGGACATCCTTAAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGACGACTTTCAAGTTATTGATCGGAGTACATATGCCCTGCTGATCCAAGCACTATGTTCAGCAAACATGATTTCGGAGGCACTTGCAAATTTGCATCATATGATTGAAAAAGGCTACCCTCCAACACCGATTATCATTGACGTTATTGTTCAAACACTTTGTCACAGGGGAAGCATCGACGAAACATCGTGTGTTTTGGGGCATGGAATCCCTTTCACAACGATTTCTTTTGACTTGTTAATGCATGAGCTTAATACACAGGGAATGTATATCAGTGCTTGA

Protein sequence

MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA

Homology

[Close]

BLAST of Cmc04g0121341 vs. NCBI nr
Match: XP_038904608.1 (pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 6.6e-71
Identity = 134/170 (78.82%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+QINCTPDRITYTTLLHGLI+WGKIRIAL TYKEMVSSGH+IE KMMNT +R LCR S 
Sbjct: 298 MKQINCTPDRITYTTLLHGLIKWGKIRIALSTYKEMVSSGHTIEAKMMNTFMRALCRRSW 357

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
            EKD+LEDAHQ+F+KMKDD+QVID+STY LLIQALCS NMISEALANLHHMIEKGY P  
Sbjct: 358 NEKDLLEDAHQVFEKMKDDYQVIDQSTYGLLIQALCSGNMISEALANLHHMIEKGYSPRA 417

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           IIIDV+VQTLCHRGS+DE   VLGHGIPF   SFDL++ ELN Q M  SA
Sbjct: 418 IIIDVVVQTLCHRGSVDEALLVLGHGIPFRRFSFDLIIDELNKQEMRFSA 467

[Close]

BLAST of Cmc04g0121341 vs. NCBI nr
Match: XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66
Identity = 125/170 (73.53%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NCTPDRI+Y+TLLHGLI+WGKIR AL+TYKEMVSSGHSIE KMMNT +R LCR + 
Sbjct: 304 MKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTW 363

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++FQVIDRSTY LLIQALCS N  SEALANLHHMI KGY P  
Sbjct: 364 KEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPWA 423

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           I IDV+VQ LCH GS  E  CVLGHGI F+ ISFDL++ ELN +GM++SA
Sbjct: 424 ITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSA 473

[Close]

BLAST of Cmc04g0121341 vs. NCBI nr
Match: KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 123/170 (72.35%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NCTPDRI+Y+TLL GLI+WGKIR AL+TYKEMVSSGHSIE KMMNT +R LCR S 
Sbjct: 304 MKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSW 363

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++ QVIDRSTY LLIQALCS N  SEALANLHHMI KGY P  
Sbjct: 364 KEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRA 423

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           I IDV+VQ LCH G   E  CVLGHGI F+ ISFDL++ ELN +GM+ SA
Sbjct: 424 ITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSA 473

[Close]

BLAST of Cmc04g0121341 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.4 bits (651), Expect = 3.5e-64
Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NCTPDRI+Y+TLL GLI+WGKIR AL+TYKEMVSSGHSIE KMMNT +R LCR + 
Sbjct: 304 MKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTW 363

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++ QVIDRSTY LLIQALCS N  SEALANLHHMI KGY P  
Sbjct: 364 KEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRA 423

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           I IDV+VQ LCH G   E  CVLGHGI F+ ISFDL++ ELN +GM+ SA
Sbjct: 424 ITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSA 473

[Close]

BLAST of Cmc04g0121341 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 255.0 bits (650), Expect = 4.6e-64
Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NCTPDRI+Y+TLL GLI+WGKIR AL+TYKEMVSSGHSIE KMMNT +R LCR + 
Sbjct: 304 MKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTW 363

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++ QVIDRSTY LLIQALCS N  SEALANLHHMI KGY P  
Sbjct: 364 KEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRA 423

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           I IDV+VQ LCH G   E  CVLGHGI F+ ISFDL++ ELN +GM+ SA
Sbjct: 424 ITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSA 473

[Close]

BLAST of Cmc04g0121341 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14
Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 11  ITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKEKDVLEDAH 70
           +TY TL++  +R G+I+ A K   EMV  G  ++    N+ I+GLCR    +K     A 
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK-----AR 589

Query: 71  QLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPIIIDVIVQTL 130
            LF+KM  D       +  +LI  LC + M+ EA+     M+ +G  P  +  + ++  L
Sbjct: 590 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 649

Query: 131 CHRGSIDETSCVL----GHGIPFTTISFDLLMHELNTQGMYISA 171
           C  G I++   +       GIP  T++F+ LM  L   G    A
Sbjct: 650 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688

[Close]

BLAST of Cmc04g0121341 vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-13
Identity = 47/173 (27.17%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           MR++ CTP+ +TYT L+H  ++  K+  A + ++ M+S G        +  I G C+   
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 61  KEKDV-----------LEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLH 120
            EK             + D    FK+  D+ +  +  TY  L+   C ++ + EA   L 
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 121 HMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCV----LGHGIPFTTISFDLLM 159
            M  +G  P  I+ D ++  LC  G +DE   V      HG P T  ++  L+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

[Close]

BLAST of Cmc04g0121341 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-11
Identity = 40/165 (24.24%), Postives = 79/165 (47.88%), Query Frame = 0


Query: 5   NCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKEKD 64
           N  PD +T++ L+   ++ GK+  A + Y EM++ G + +    N+ I G C+     ++
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-----EN 369

Query: 65  VLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPIIID 124
            L +A+Q+F  M       D  TY++LI + C A  + + +     +  KG  P  I  +
Sbjct: 370 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 429

Query: 125 VIVQTLCHRGSIDET----SCVLGHGIPFTTISFDLLMHELNTQG 166
            +V   C  G ++        ++  G+P + +++ +L+  L   G
Sbjct: 430 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

[Close]

BLAST of Cmc04g0121341 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-10
Identity = 43/138 (31.16%), Postives = 65/138 (47.10%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M Q  C PD +TY T+++GL + G I +AL   K+M       +  + NT I GLC+   
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK- 273

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
                ++DA  LF +M +     D  TY+ LI  LC+    S+A   L  MIE+   P  
Sbjct: 274 ----HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 333

Query: 121 IIIDVIVQTLCHRGSIDE 139
           +    ++      G + E
Sbjct: 334 VTFSALIDAFVKEGKLVE 346

[Close]

BLAST of Cmc04g0121341 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-10
Identity = 48/163 (29.45%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 8   PDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKEKDVLE 67
           PD  TYT+L+ G  +   +  A K + EM   G           I GLC         ++
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR-----ID 310

Query: 68  DAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPIIIDVIV 127
           +A  LF KMKDD       TY +LI++LC +   SEAL  +  M E G  P      V++
Sbjct: 311 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 370

Query: 128 QTLCHRGSIDETSCVLGH----GIPFTTISFDLLMHELNTQGM 167
            +LC +   ++   +LG     G+    I+++ L++    +GM
Sbjct: 371 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

[Close]

BLAST of Cmc04g0121341 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.1e-66
Identity = 125/170 (73.53%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NCTPDRI+Y+TLLHGLI+WGKIR AL+TYKEMVSSGHSIE KMMNT +R LCR + 
Sbjct: 304 MKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTW 363

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++FQVIDRSTY LLIQALCS N  SEALANLHHMI KGY P  
Sbjct: 364 KEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPWA 423

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           I IDV+VQ LCH GS  E  CVLGHGI F+ ISFDL++ ELN +GM++SA
Sbjct: 424 ITIDVMVQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSA 473

[Close]

BLAST of Cmc04g0121341 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-64
Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NCTPDRI+Y+TLL GLI+WGKIR AL+TYKEMVSSGHSIE KMMNT +R LCR + 
Sbjct: 304 MKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTW 363

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++ QVIDRSTY LLIQALCS N  SEALANLHHMI KGY P  
Sbjct: 364 KEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRA 423

Query: 121 IIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGMYISA 171
           I IDV+VQ LCH G   E  CVLGHGI F+ ISFDL++ ELN +GM+ SA
Sbjct: 424 ITIDVMVQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSA 473

[Close]

BLAST of Cmc04g0121341 vs. ExPASy TrEMBL
Match: A0A5D3DMQ7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00200 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 47  MMNTSIRGLCRTSLKEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALA 106
           MMNTSIRGLCRTSLKEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALA
Sbjct: 1   MMNTSIRGLCRTSLKEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALA 60

Query: 107 NLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGM 166
           NLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGM
Sbjct: 61  NLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGM 120

Query: 167 YISA 171
           YISA
Sbjct: 121 YISA 124

[Close]

BLAST of Cmc04g0121341 vs. ExPASy TrEMBL
Match: A0A5A7TQU3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005880 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.2e-63
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 47  MMNTSIRGLCRTSLKEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALA 106
           MMNTSIRGLCRTSLKEKDVLEDAHQLFKKMK DFQVIDRSTYALLIQALCSANMISEALA
Sbjct: 1   MMNTSIRGLCRTSLKEKDVLEDAHQLFKKMKGDFQVIDRSTYALLIQALCSANMISEALA 60

Query: 107 NLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGM 166
           NLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGM
Sbjct: 61  NLHHMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCVLGHGIPFTTISFDLLMHELNTQGM 120

Query: 167 YISA 171
           YISA
Sbjct: 121 YISA 124

[Close]

BLAST of Cmc04g0121341 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59
Identity = 115/179 (64.25%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M+Q+NC PDRI+YTTLLHGLI+WGKIR AL+TYKEMVSSGHS+E KMMNT +R LCR S 
Sbjct: 297 MKQMNCMPDRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSW 356

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
           KEKD+LEDAHQ+F+KMK++FQVI RSTY ++I ALCS N ISEA+ANLHHMI KGY P  
Sbjct: 357 KEKDLLEDAHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRA 416

Query: 121 IIIDVIVQTLCHRGSIDETSCVLG---------HGIPFTTISFDLLMHELNTQGMYISA 171
           I I+V+V+ LC RGS +E   V+G         H IPF+ +S+DL++ ELN QGM+  A
Sbjct: 417 ITINVVVEALCRRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDA 475

[Close]

BLAST of Cmc04g0121341 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 11  ITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKEKDVLEDAH 70
           +TY TL++  +R G+I+ A K   EMV  G  ++    N+ I+GLCR    +K     A 
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK-----AR 589

Query: 71  QLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPIIIDVIVQTL 130
            LF+KM  D       +  +LI  LC + M+ EA+     M+ +G  P  +  + ++  L
Sbjct: 590 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 649

Query: 131 CHRGSIDETSCVL----GHGIPFTTISFDLLMHELNTQGMYISA 171
           C  G I++   +       GIP  T++F+ LM  L   G    A
Sbjct: 650 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688

[Close]

BLAST of Cmc04g0121341 vs. TAIR 10
Match: AT1G77340.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 9.4e-15
Identity = 48/143 (33.57%), Postives = 68/143 (47.55%), Query Frame = 0


Query: 3   QINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKE 62
           Q  C PD  TYT+ + G  R  ++  A K +KEM  +G           I GL      E
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF-----E 242

Query: 63  KDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPII 122
              +++A  L  KMKDD    +  TY +LI ALC +   SEA+     M E G  P   +
Sbjct: 243 AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCM 302

Query: 123 IDVIVQTLCHRGSIDETSCVLGH 146
             V++Q+ C   ++DE S +L H
Sbjct: 303 YTVLIQSFCSGDTLDEASGLLEH 320

[Close]

BLAST of Cmc04g0121341 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-14
Identity = 47/173 (27.17%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           MR++ CTP+ +TYT L+H  ++  K+  A + ++ M+S G        +  I G C+   
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 61  KEKDV-----------LEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLH 120
            EK             + D    FK+  D+ +  +  TY  L+   C ++ + EA   L 
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 121 HMIEKGYPPTPIIIDVIVQTLCHRGSIDETSCV----LGHGIPFTTISFDLLM 159
            M  +G  P  I+ D ++  LC  G +DE   V      HG P T  ++  L+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

[Close]

BLAST of Cmc04g0121341 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 40/165 (24.24%), Postives = 79/165 (47.88%), Query Frame = 0


Query: 5   NCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSLKEKD 64
           N  PD +T++ L+   ++ GK+  A + Y EM++ G + +    N+ I G C+     ++
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-----EN 369

Query: 65  VLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTPIIID 124
            L +A+Q+F  M       D  TY++LI + C A  + + +     +  KG  P  I  +
Sbjct: 370 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 429

Query: 125 VIVQTLCHRGSIDET----SCVLGHGIPFTTISFDLLMHELNTQG 166
            +V   C  G ++        ++  G+P + +++ +L+  L   G
Sbjct: 430 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

[Close]

BLAST of Cmc04g0121341 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 43/138 (31.16%), Postives = 65/138 (47.10%), Query Frame = 0


Query: 1   MRQINCTPDRITYTTLLHGLIRWGKIRIALKTYKEMVSSGHSIEPKMMNTSIRGLCRTSL 60
           M Q  C PD +TY T+++GL + G I +AL   K+M       +  + NT I GLC+   
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK- 273

Query: 61  KEKDVLEDAHQLFKKMKDDFQVIDRSTYALLIQALCSANMISEALANLHHMIEKGYPPTP 120
                ++DA  LF +M +     D  TY+ LI  LC+    S+A   L  MIE+   P  
Sbjct: 274 ----HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 333

Query: 121 IIIDVIVQTLCHRGSIDE 139
           +    ++      G + E
Sbjct: 334 VTFSALIDAFVKEGKLVE 346

The following BLAST results are available for this feature:

BLAST of Cmc04g0121341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904608.1	6.6e-71	78.82	pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida]	[more]
XP_022982589.1	2.2e-66	73.53	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucur...	[more]
KAG7017186.1	1.6e-64	72.35	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6580429.1	3.5e-64	71.76	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022935128.1	4.6e-64	71.76	pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata]	[more]

BLAST of Cmc04g0121341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMF6	3.5e-14	30.49	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q9M9X9	5.0e-13	27.17	Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop...	[more]
Q6NQ83	4.7e-11	24.24	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9LQ16	3.0e-10	31.16	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	5.2e-10	29.45	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc04g0121341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J506	1.1e-66	73.53	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]
A0A6J1F9P1	2.2e-64	71.76	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A5D3DMQ7	1.1e-63	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7TQU3	7.2e-63	99.19	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DW66	2.8e-59	64.25	pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti...	[more]

BLAST of Cmc04g0121341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64320.1	2.5e-15	30.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G77340.1	9.4e-15	33.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G06710.1	3.6e-14	27.17	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22470.1	3.3e-12	24.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62910.1	2.2e-11	31.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 87..119 e-value: 4.6E-5 score: 21.3 coord: 11..42 e-value: 1.9E-7 score: 28.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 86..115 e-value: 0.016 score: 15.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 8..57 e-value: 1.6E-7 score: 31.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 84..118 score: 11.070971
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 9..43 score: 10.64348
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..61 e-value: 4.6E-11 score: 44.4 coord: 62..168 e-value: 3.6E-13 score: 51.2
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..170
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0121341.1	Cmc04g0121341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding