Cmc04g0120631 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0120631
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 36097999 .. 36098898 (+)
RNA-Seq ExpressionCmc04g0120631
SyntenyCmc04g0120631
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTGAAGAATATAGATAATCCAAAATCTATAGCCTTGAGAGGGGAATTCTCCTTCTTGTTAGCGAACAAGAAATTTTCAGGCTTCAAGTCTCTGTGAATTACCCCATGCTTATGGCATAGTTGCACAACCTCAACGATTGTTCTCATAACAGCCGCAGCTGCTCGTTCCGTGTAATGTCCTCTTGCAACAATTCGATCAAAAAGCTCGCCACCCTCACACAATTCCATCACCAAATGCACAGCATTCTCATCCTCACAAGCTTCCTTCAAGCTCACAATACTCGAATTCTTAGGCAAATGCTTCATAATTGCAACTTCACGCCTCACATCCTCAATATCCACAGCCGTCCTCAACTTCCGCTTCGAAATACTCTTACAAGCCAATAAATCCCTCGTTTGACGGTCTATACAAAGATAAGTAACACCAAACTCACCTCGACCAAGCTCCCGATCCACCATATACTTCTCCTCAATATTCTCCTTTGGCACACCATTCAACACCGTAACCGGTACCTTCTTTCCCGCATTCGAGTCCCGACGGCTATGATCCTGTCCCGAAAAACTCGATTTCACATCCTCCCTAGCAACAGCCGCCGGAGATCTACAACAATTCCCCATCAGAGTAGAAAAACCTCAAATCTCCACCGTTGGATCTCCGAAAACCCTCAACCAAAAGCAGTCAGTAAACAGAGAAGCTTTTGAACATTCAGACCATAATGGCGAAACCCTAACCCTAAGAAGAAGAGAAAGAGAGAGAGAGAGAGAGAGAAAAGAAGAAGGTCCCCGTGAAGTGAAATCAAAGAGTAATGTCAGGGAAATGGAACCGTAGAAGGGAAATTGGGAGAGAGAGAGAGAGAGAAAGTGAGTGTTGTTGAAGTAGAGAGAGTGAGTAGAGAGTG

mRNA sequence

GCTTGAAGAATATAGATAATCCAAAATCTATAGCCTTGAGAGGGGAATTCTCCTTCTTGTTAGCGAACAAGAAATTTTCAGGCTTCAAGTCTCTGTGAATTACCCCATGCTTATGGCATAGTTGCACAACCTCAACGATTGTTCTCATAACAGCCGCAGCTGCTCGTTCCGTGTAATGTCCTCTTGCAACAATTCGATCAAAAAGCTCGCCACCCTCACACAATTCCATCACCAAATGCACAGCATTCTCATCCTCACAAGCTTCCTTCAAGCTCACAATACTCGAATTCTTAGGCAAATGCTTCATAATTGCAACTTCACGCCTCACATCCTCAATATCCACAGCCGTCCTCAACTTCCGCTTCGAAATACTCTTACAAGCCAATAAATCCCTCGTTTGACGGTCTATACAAAGATAAGTAACACCAAACTCACCTCGACCAAGCTCCCGATCCACCATATACTTCTCCTCAATATTCTCCTTTGGCACACCATTCAACACCGTAACCGGTACCTTCTTTCCCGCATTCGAGTCCCGACGGCTATGATCCTGTCCCGAAAAACTCGATTTCACATCCTCCCTAGCAACAGCCGCCGGAGATCTACAACAATTCCCCATCAGAGTAGAAAAACCTCAAATCTCCACCGTTGGATCTCCGAAAACCCTCAACCAAAAGCAGTCAGTAAACAGAGAAGCTTTTGAACATTCAGACCATAATGGCGAAACCCTAACCCTAAGAAGAAGAGAAAGAGAGAGAGAGAGAGAGAGAAAAGAAGAAGGTCCCCGTGAAGTGAAATCAAAGAGTAATGTCAGGGAAATGGAACCGTAGAAGGGAAATTGGGAGAGAGAGAGAGAGAGAAAGTGAGTGTTGTTGAAGTAGAGAGAGTGAGTAGAGAGTG

Coding sequence (CDS)

ATGTCCTCTTGCAACAATTCGATCAAAAAGCTCGCCACCCTCACACAATTCCATCACCAAATGCACAGCATTCTCATCCTCACAAGCTTCCTTCAAGCTCACAATACTCGAATTCTTAGGCAAATGCTTCATAATTGCAACTTCACGCCTCACATCCTCAATATCCACAGCCGTCCTCAACTTCCGCTTCGAAATACTCTTACAAGCCAATAA

Protein sequence

MSSCNNSIKKLATLTQFHHQMHSILILTSFLQAHNTRILRQMLHNCNFTPHILNIHSRPQLPLRNTLTSQ
Homology
[Close]
BLAST of Cmc04g0120631 vs. NCBI nr
Match: RWW16963.1 (hypothetical protein GW17_00019124, partial [Ensete ventricosum])

HSP 1 Score: 63.9 bits (154), Expect = 6.2e-07
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 4   CNNSIKKLATLTQFHHQMHSILILTSFLQAHNTRILRQMLHNCNFTPHILNIHSRPQLPL 63
           CN+ I++L  LT+ HHQ+H  ++L   +Q HN    RQ+ H+ +  PH+L++H RP+L L
Sbjct: 160 CNDPIEELPALTELHHQVHGAVVLPRLVQGHNAGAPRQVAHDGHLPPHVLDVHRRPELAL 219

Query: 64  RNTLTSQ 71
           R+ L  +
Sbjct: 220 RDRLARE 226

[Close]
BLAST of Cmc04g0120631 vs. ExPASy TrEMBL
Match: A0A444F2X8 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00019124 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.0e-07
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 4   CNNSIKKLATLTQFHHQMHSILILTSFLQAHNTRILRQMLHNCNFTPHILNIHSRPQLPL 63
           CN+ I++L  LT+ HHQ+H  ++L   +Q HN    RQ+ H+ +  PH+L++H RP+L L
Sbjct: 160 CNDPIEELPALTELHHQVHGAVVLPRLVQGHNAGAPRQVAHDGHLPPHVLDVHRRPELAL 219

Query: 64  RNTLTSQ 71
           R+ L  +
Sbjct: 220 RDRLARE 226

[Close]
BLAST of Cmc04g0120631 vs. ExPASy TrEMBL
Match: A0A2I0VE34 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca028645 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-04
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 1  MSSCNNSIKKLATLTQFHHQMHSILILTSFLQAHNTRILRQMLHNCNFTPHILNIHSRPQ 60
          MS  NN IK+L + T+ HH MHS  +L S    ++  +  QM+H  N  PHI++I  R +
Sbjct: 28 MSPLNNPIKQLPSNTEVHHNMHSYRVLISINNRNHIGMPGQMMHYLNLPPHIIDILLRDK 87

Query: 61 LPLRNTLTSQ 71
          LPL + L S+
Sbjct: 88 LPLGDRLASE 97

The following BLAST results are available for this feature:
BLAST of Cmc04g0120631 vs. NCBI nr
Match NameE-valueIdentityDescription
RWW16963.16.2e-0740.30hypothetical protein GW17_00019124, partial [Ensete ventricosum][more]
BLAST of Cmc04g0120631 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0120631 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A444F2X83.0e-0740.30Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_0001912... [more]
A0A2I0VE345.3e-0441.43Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca028645 PE=4... [more]
BLAST of Cmc04g0120631 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0120631.1Cmc04g0120631.1mRNA