Cmc04g0120281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0120281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr04: 35911044 .. 35913074 (+)
RNA-Seq Expression	Cmc04g0120281
Synteny	Cmc04g0120281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTGGCGCTGCAGGAGACTCCAAACTATGGAGTAATCCTGGGCTCAGGAACGGCCGTGAAGGGTAAGGGGATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACGGATAGCTTCTTACCATTGCAGTTGGGGGGAGTTGACATGATCCTAGGGATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCATCAAGGGAAGAAGGTTGTGATACGAGGGGATCCAAGCCTAATTAAGACAAGGGTGAGTTTGAAGAATCTAATGAAAACGTGGGGGGCTGACGACCAAGGATTCCTAGTGGAATGCCGAACCTTAGAGTGCGGGAAGATGGAAGATGAACAGGAACAGGGGCGGGGAAAGGTCGAAGCAGAGCCCATAGCGGCACTGCTCAAGCGATTCGCCCGCGTGTTTGAATGGCCTGCTACCCTTCCACCCCAGCGCACAATTGAACATCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATATCGATACGCGCACCATCAGAAGGAGGAAATGGAGAGGTTGGTAGATGAGATGTTATCTTCAGGGATCATACGACCTAGTAAAAGCCCGTACTCCAGCCCTGTGCTGTTAGTGAGGAAGAAGGACGGAAGTTGGAGGTTCTGCGTAGATTACCGAGCCTTGAACAATGTCACGATACCAGACAAGTTCCCCATACCTGTGATAGAAGAATTATTTGATGAACTCAAAGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCGGAAGATATTGAGAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTGATGCCGTTTGGCTTAACGAATGCCCCCTCCACATTCCAGGCCCTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATATTAATCTACAGCCAAGGGATGGACGAACATGTTCAACACTTAGAAGTGGTTTTAGGGCTGCTGCAGGACCGGGAATTATTTGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGTTTGGAAGCCGATCCCGAAAAGATAAGGGCAGTGAGTGAATGGCCAACCCCAACCAATGTGAGGGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTACAGGCGTTTCGTTAAGAACTACGGGGCCATAGCCGCACCACTCACCCAACTACTCAAGAAAGGAACATACAAATGGGATGCAGAAGCCGAGGACGCTTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTCCCTTTCGAAATTGAATCGGATGCTTCGGGAGTGGGAGTGGGGGCTGTCCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACTTTAAGTATGCGGGACAGAGCACGACCGGTATATGAAAGAGAATTACTTGCGGTAGTGCTGGCCGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACGGACCAACGGTCGCTTAAGTTCTTATTGGAACAGCGGGTGGTGCAGCCTCAGTATCAGAAATGGGTAGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCGTTATCCAGGGTACCCCCAGCAGTACACTTAAGTCAGATCACGGCTCCCCCGATGATAGACATGGAAATTATTAAGGAAGAAACAAAGCTTGACCCTGCACTGCAAGAAATCACCCGAATATTAGAAGAAGGGATGGAAATACCCCATTACACCCTGCAGCAAGGGGTGTTGAAGTTTAAGGGCCGGTTGGTGATTCCAAACAAGTCTACGTTGATTCCTACGATATTACACACATACCACGACTCTGTGTTTGGGGGGGCACTCGGGATTCTTAAGAACCTATAA

mRNA sequence

ATGGGATTGGCGCTGCAGGAGACTCCAAACTATGGAGTAATCCTGGGCTCAGGAACGGCCGTGAAGGGTAAGGGGATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACGGATAGCTTCTTACCATTGCAGTTGGGGGGAGTTGACATGATCCTAGGGATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCATCAAGGGAAGAAGGTTGTGATACGAGGGGATCCAAGCCTAATTAAGACAAGGGTGAGTTTGAAGAATCTAATGAAAACGTGGGGGGCTGACGACCAAGGATTCCTAGTGGAATGCCGAACCTTAGAGTGCGGGAAGATGGAAGATGAACAGGAACAGGGGCGGGGAAAGGTCGAAGCAGAGCCCATAGCGGCACTGCTCAAGCGATTCGCCCGCGTGTTTGAATGGCCTGCTACCCTTCCACCCCAGCGCACAATTGAACATCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATATCGATACGCGCACCATCAGAAGGAGGAAATGGAGAGGTTGGTAGATGAGATGTTATCTTCAGGGATCATACGACCTAGTAAAAGCCCGTACTCCAGCCCTGTGCTGTTAGTGAGGAAGAAGGACGGAAGTTGGAGGTTCTGCGTAGATTACCGAGCCTTGAACAATGTCACGATACCAGACAAGTTCCCCATACCTGTGATAGAAGAATTATTTGATGAACTCAAAGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCGGAAGATATTGAGAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTGATGCCGTTTGGCTTAACGAATGCCCCCTCCACATTCCAGGCCCTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATATTAATCTACAGCCAAGGGATGGACGAACATGTTCAACACTTAGAAGTGGTTTTAGGGCTGCTGCAGGACCGGGAATTATTTGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGTTTGGAAGCCGATCCCGAAAAGATAAGGGCAGTGAGTGAATGGCCAACCCCAACCAATGTGAGGGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTACAGGCGTTTCGTTAAGAACTACGGGGCCATAGCCGCACCACTCACCCAACTACTCAAGAAAGGAACATACAAATGGGATGCAGAAGCCGAGGACGCTTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTCCCTTTCGAAATTGAATCGGATGCTTCGGGAGTGGGAGTGGGGGCTGTCCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACTTTAAGTATGCGGGACAGAGCACGACCGGTATATGAAAGAGAATTACTTGCGGTAGTGCTGGCCGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACGGACCAACGGTCGCTTAAGTTCTTATTGGAACAGCGGGTGGTGCAGCCTCAGTATCAGAAATGGGTAGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCGTTATCCAGGGTACCCCCAGCAGTACACTTAAGTCAGATCACGGCTCCCCCGATGATAGACATGGAAATTATTAAGGAAGAAACAAAGCTTGACCCTGCACTGCAAGAAATCACCCGAATATTAGAAGAAGGGATGGAAATACCCCATTACACCCTGCAGCAAGGGGTGTTGAAGTTTAAGGGCCGGTTGGTGATTCCAAACAAGTCTACGTTGATTCCTACGATATTACACACATACCACGACTCTGTGTTTGGGGGGGCACTCGGGATTCTTAAGAACCTATAA

Coding sequence (CDS)

ATGGGATTGGCGCTGCAGGAGACTCCAAACTATGGAGTAATCCTGGGCTCAGGAACGGCCGTGAAGGGTAAGGGGATGTGCCGAAGTGTTGAAGTGCAATTGGACGGCTGGAAGGTAACGGATAGCTTCTTACCATTGCAGTTGGGGGGAGTTGACATGATCCTAGGGATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTACTTACTTTTCATCATCAAGGGAAGAAGGTTGTGATACGAGGGGATCCAAGCCTAATTAAGACAAGGGTGAGTTTGAAGAATCTAATGAAAACGTGGGGGGCTGACGACCAAGGATTCCTAGTGGAATGCCGAACCTTAGAGTGCGGGAAGATGGAAGATGAACAGGAACAGGGGCGGGGAAAGGTCGAAGCAGAGCCCATAGCGGCACTGCTCAAGCGATTCGCCCGCGTGTTTGAATGGCCTGCTACCCTTCCACCCCAGCGCACAATTGAACATCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTTCGGCCATATCGATACGCGCACCATCAGAAGGAGGAAATGGAGAGGTTGGTAGATGAGATGTTATCTTCAGGGATCATACGACCTAGTAAAAGCCCGTACTCCAGCCCTGTGCTGTTAGTGAGGAAGAAGGACGGAAGTTGGAGGTTCTGCGTAGATTACCGAGCCTTGAACAATGTCACGATACCAGACAAGTTCCCCATACCTGTGATAGAAGAATTATTTGATGAACTCAAAGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCGGAAGATATTGAGAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTGATGCCGTTTGGCTTAACGAATGCCCCCTCCACATTCCAGGCCCTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATATTAATCTACAGCCAAGGGATGGACGAACATGTTCAACACTTAGAAGTGGTTTTAGGGCTGCTGCAGGACCGGGAATTATTTGTGAATATGGAAAAGTGCAGTTTCGCCAAACCACGGATTAGTTACTTGGGACACTTCATCTCGGAACAGGGTTTGGAAGCCGATCCCGAAAAGATAAGGGCAGTGAGTGAATGGCCAACCCCAACCAATGTGAGGGAGGTTAGAGGCTTCCTTGGCCTGACTGGCTATTACAGGCGTTTCGTTAAGAACTACGGGGCCATAGCCGCACCACTCACCCAACTACTCAAGAAAGGAACATACAAATGGGATGCAGAAGCCGAGGACGCTTTTAACAAACTGAAAAAGGCTATGATGACTCTCCCTGTGCTCACCATGCCGGATTTCAACCTCCCTTTCGAAATTGAATCGGATGCTTCGGGAGTGGGAGTGGGGGCTGTCCTGACTCAATGCCGGAAACCAGTGGCTTATTTCAGCAAGACTTTAAGTATGCGGGACAGAGCACGACCGGTATATGAAAGAGAATTACTTGCGGTAGTGCTGGCCGTCCAAAGATGGAGACCTTACCTACTAGGGAGGAAATTCACGGTGAAAACGGACCAACGGTCGCTTAAGTTCTTATTGGAACAGCGGGTGGTGCAGCCTCAGTATCAGAAATGGGTAGCGAAGCTCCTGGGGTACTCATTTGAAGTGGTTTACCAACCAGGACTGGAGAATAAGGCGGCTGACGCGTTATCCAGGGTACCCCCAGCAGTACACTTAAGTCAGATCACGGCTCCCCCGATGATAGACATGGAAATTATTAAGGAAGAAACAAAGCTTGACCCTGCACTGCAAGAAATCACCCGAATATTAGAAGAAGGGATGGAAATACCCCATTACACCCTGCAGCAAGGGGTGTTGAAGTTTAAGGGCCGGTTGGTGATTCCAAACAAGTCTACGTTGATTCCTACGATATTACACACATACCACGACTCTGTGTTTGGGGGGGCACTCGGGATTCTTAAGAACCTATAA

Protein sequence

MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTLECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGALGILKNL

Homology

[Close]

BLAST of Cmc04g0120281 vs. NCBI nr
Match: KAA0055700.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 667/674 (98.96%), Postives = 670/674 (99.41%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 448  IGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 507

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 508  HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 567

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGKMEDEQEQGRGKVEAEPIAALLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 568  ECGKMEDEQEQGRGKVEAEPIAALLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 627

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 628  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 687

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 688  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 747

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 748  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 807

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 808  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 867

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 868  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 927

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 928  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 987

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSR PPAVHLSQITAPPM
Sbjct: 988  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRAPPAVHLSQITAPPM 1047

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1048 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1107

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1108 YHDSVFGGHSGFLR 1121

[Close]

BLAST of Cmc04g0120281 vs. NCBI nr
Match: KAA0038753.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 974  LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 1033

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 1034 HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 1093

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 1094 ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 1153

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 1154 PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 1213

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 1214 PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 1273

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 1274 GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 1333

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 1334 NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 1393

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 1394 KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1453

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1454 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1513

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1514 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1573

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1574 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1633

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1634 YHDSVFGGHSGFLR 1647

[Close]

BLAST of Cmc04g0120281 vs. NCBI nr
Match: TYK08591.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 1053 LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 1112

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 1113 HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 1172

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 1173 ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 1232

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 1233 PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 1292

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 1293 PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 1352

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 1353 GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 1412

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 1413 NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 1472

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 1473 KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1532

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1533 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1592

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1593 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1652

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1653 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1712

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1713 YHDSVFGGHSGFLR 1726

[Close]

BLAST of Cmc04g0120281 vs. NCBI nr
Match: KAA0033982.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 531  LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 590

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 591  HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 650

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 651  ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 710

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 711  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 770

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 771  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 830

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 831  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 890

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 891  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 950

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 951  KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1010

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1011 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1070

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1071 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1130

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1131 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1190

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1191 YHDSVFGGHSGFLR 1204

[Close]

BLAST of Cmc04g0120281 vs. NCBI nr
Match: TYK24981.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 531  LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 590

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 591  HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 650

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 651  ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 710

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 711  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 770

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 771  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 830

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 831  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 890

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 891  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 950

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 951  KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1010

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1011 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1070

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1071 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1130

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1131 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1190

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1191 YHDSVFGGHSGFLR 1204

[Close]

BLAST of Cmc04g0120281 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.1e-98
Identity = 178/428 (41.59%), Postives = 266/428 (62.15%), Query Frame = 0


Query: 167 HIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKD--- 226
           H+   +   P+  + Y  A   + E+E  V EML+ G+IR S SPY+SP  +V KK    
Sbjct: 197 HVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDAS 256

Query: 227 --GSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDI 286
               +R  +DYR LN +TIPD++PIP ++E+  +L     F+ +DL  G+HQI M  E I
Sbjct: 257 GANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESI 316

Query: 287 EKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDE 346
            KTAF T  GHYE+L MPFGL NAP+TFQ  MN + +P L +  LV+ DDI+I+S  + E
Sbjct: 317 SKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTE 376

Query: 347 HVQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPT 406
           H+  +++V   L D  L + ++KC F K   ++LGH ++  G++ +P K++A+  +P PT
Sbjct: 377 HLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPT 436

Query: 407 NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGTYKWDA---EAEDAFNKLKKAMMT 466
             +E+R FLGLTGYYR+F+ NY  IA P+T  LKK T K D    E  +AF KLK  ++ 
Sbjct: 437 KDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRT-KIDTQKLEYIEAFEKLKALIIR 496

Query: 467 LPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVV 526
            P+L +PDF   F + +DAS + +GAVL+Q   P+++ S+TL+  +      E+ELLA+V
Sbjct: 497 DPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIV 556

Query: 527 LAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENK 586
            A + +R YLLGR+F + +D + L++L   +    + ++W  +L  Y F++ Y  G EN 
Sbjct: 557 WATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENS 616

[Close]

BLAST of Cmc04g0120281 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.4e-97
Identity = 173/412 (41.99%), Postives = 259/412 (62.86%), Query Frame = 0


Query: 182 YRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGS-----WRFCVDYRALN 241
           Y Y    ++E+E  + +ML+ GIIR S SPY+SP+ +V KK  +     +R  +DYR LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 242 NVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFL 301
            +T+ D+ PIP ++E+  +L   + F+ +DL  G+HQI M PE + KTAF T  GHYE+L
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 302 VMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDR 361
            MPFGL NAP+TFQ  MN + +P L +  LV+ DDI+++S  +DEH+Q L +V   L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 362 ELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYY 421
            L + ++KC F K   ++LGH ++  G++ +PEKI A+ ++P PT  +E++ FLGLTGYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 422 RRFVKNYGAIAAPLTQLLKKGTY--KWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIE 481
           R+F+ N+  IA P+T+ LKK       + E + AF KLK  +   P+L +PDF   F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 482 SDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFT 541
           +DAS V +GAVL+Q   P++Y S+TL+  +      E+ELLA+V A + +R YLLGR F 
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 542 VKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRV 587
           + +D + L +L   +    +  +W  KL  + F++ Y  G EN  ADALSR+
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRI 624

[Close]

BLAST of Cmc04g0120281 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.0e-96
Identity = 195/532 (36.65%), Postives = 304/532 (57.14%), Query Frame = 0


Query: 139 EPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDE 198
           E + +LL  F R+FE P +     T        +  DP+  + Y Y  + + E+ER +DE
Sbjct: 86  EILNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDE 145

Query: 199 MLSSGIIRPSKSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTIPDKFPIPVIEELF 258
           +L  GIIRPS SPY+SP+ +V KK     +  +R  VD++ LN VTIPD +PIP I    
Sbjct: 146 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 205

Query: 259 DELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALM 318
             L  A  F+ LDL +G+HQI M   DI KTAF T  G YEFL +PFGL NAP+ FQ ++
Sbjct: 206 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 265

Query: 319 NQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFVNMEKCSFAKPRIS 378
           + + + ++ +   V+ DDI+++S+  D H ++L +VL  L    L VN+EK  F   ++ 
Sbjct: 266 DDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVE 325

Query: 379 YLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQL 438
           +LG+ ++  G++ADP+K+RA+SE P PT+V+E++ FLG+T YYR+F+++Y  +A PLT L
Sbjct: 326 FLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNL 385

Query: 439 LK------------KGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGVG 498
            +            K     D  A  +FN LK  + +  +L  P F  PF + +DAS   
Sbjct: 386 TRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWA 445

Query: 499 VGAVLTQ----CRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGR-KFTVK 558
           +GAVL+Q      +P+AY S++L+  +      E+E+LA++ ++   R YL G     V 
Sbjct: 446 IGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVY 505

Query: 559 TDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVH--LSQ 618
           TD + L F L  R    + ++W A++  Y+ E++Y+PG  N  ADALSR+PP ++   + 
Sbjct: 506 TDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRIPPQLNQLSTD 565

Query: 619 ITAPPMIDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLV 647
           + A P  DM+ +        AL + +R+      IPH  ++  +  FK +L+
Sbjct: 566 LDANPEDDMQSL---ATAHSALHDSSRL------IPH--VESPINVFKNQLI 606

[Close]

BLAST of Cmc04g0120281 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-92
Identity = 203/544 (37.32%), Postives = 297/544 (54.60%), Query Frame = 0


Query: 164  IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKD 223
            ++H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP SSPV+LV KKD
Sbjct: 584  VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD 643

Query: 224  GSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEK 283
            G++R CVDYR LN  TI D FP+P I+ L   +  A +F+ LDL +GYHQI M P+D  K
Sbjct: 644  GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 703

Query: 284  TAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHV 343
            TAF T  G YE+ VMPFGL NAPSTF   M   F+    RFV V+ DDILI+S+  +EH 
Sbjct: 704  TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHW 763

Query: 344  QHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNV 403
            +HL+ VL  L++  L V  +KC FA     +LG+ I  Q +     K  A+ ++PTP  V
Sbjct: 764  KHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTV 823

Query: 404  REVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLT 463
            ++ + FLG+  YYRRF+ N   IA P+ QL      +W  + + A +KLK A+   PVL 
Sbjct: 824  KQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIDKLKDALCNSPVLV 883

Query: 464  MPDFNLPFEIESDASGVGVGAVLTQCRKP------VAYFSKTLSMRDRARPVYERELLAV 523
              +    + + +DAS  G+GAVL +          V YFSK+L    +  P  E ELL +
Sbjct: 884  PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGI 943

Query: 524  VLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLEN 583
            + A+  +R  L G+ FT++TD  SL  L  +     + Q+W+  L  Y F + Y  G +N
Sbjct: 944  IKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKN 1003

Query: 584  KAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPA-------LQEIT---------- 643
              ADA+SR   AV+         ID E  K   K DP        ++E+T          
Sbjct: 1004 VVADAISR---AVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMS 1063

Query: 644  --RILEEGMEI-----PHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHD-SVFGGALGI 677
              R  ++ +E+      +Y+L+  ++ ++ RLV+P K      ++  YHD ++FGG  G+
Sbjct: 1064 AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQ--NAVMRLYHDHTLFGGHFGV 1119

[Close]

BLAST of Cmc04g0120281 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-92
Identity = 202/544 (37.13%), Postives = 296/544 (54.41%), Query Frame = 0


Query: 164  IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKD 223
            ++H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP SSPV+LV KKD
Sbjct: 610  VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD 669

Query: 224  GSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEK 283
            G++R CVDYR LN  TI D FP+P I+ L   +  A +F+ LDL +GYHQI M P+D  K
Sbjct: 670  GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 729

Query: 284  TAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHV 343
            TAF T  G YE+ VMPFGL NAPSTF   M   F+    RFV V+ DDILI+S+  +EH 
Sbjct: 730  TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHW 789

Query: 344  QHLEVVLGLLQDRELFVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNV 403
            +HL+ VL  L++  L V  +KC FA     +LG+ I  Q +     K  A+ ++PTP  V
Sbjct: 790  KHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTV 849

Query: 404  REVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLT 463
            ++ + FLG+  YYRRF+ N   IA P+ QL      +W  + + A  KLK A+   PVL 
Sbjct: 850  KQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIEKLKAALCNSPVLV 909

Query: 464  MPDFNLPFEIESDASGVGVGAVLTQCRKP------VAYFSKTLSMRDRARPVYERELLAV 523
              +    + + +DAS  G+GAVL +          V YFSK+L    +  P  E ELL +
Sbjct: 910  PFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGI 969

Query: 524  VLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLEN 583
            + A+  +R  L G+ FT++TD  SL  L  +     + Q+W+  L  Y F + Y  G +N
Sbjct: 970  IKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKN 1029

Query: 584  KAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPA-------LQEIT---------- 643
              ADA+SR   A++         ID E  K   K DP        ++E+T          
Sbjct: 1030 VVADAISR---AIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMS 1089

Query: 644  --RILEEGMEI-----PHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHD-SVFGGALGI 677
              R  ++ +E+      +Y+L+  ++ ++ RLV+P K      ++  YHD ++FGG  G+
Sbjct: 1090 AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQ--NAVMRLYHDHTLFGGHFGV 1145

[Close]

BLAST of Cmc04g0120281 vs. ExPASy TrEMBL
Match: A0A5A7UKN8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00820 PE=4 SV=1)

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 667/674 (98.96%), Postives = 670/674 (99.41%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 448  IGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 507

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 508  HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 567

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGKMEDEQEQGRGKVEAEPIAALLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 568  ECGKMEDEQEQGRGKVEAEPIAALLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 627

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 628  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 687

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 688  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 747

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 748  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 807

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 808  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 867

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 868  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 927

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 928  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 987

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSR PPAVHLSQITAPPM
Sbjct: 988  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRAPPAVHLSQITAPPM 1047

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1048 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1107

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1108 YHDSVFGGHSGFLR 1121

[Close]

BLAST of Cmc04g0120281 vs. ExPASy TrEMBL
Match: A0A5A7SS61 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00430 PE=4 SV=1)

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 531  LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 590

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 591  HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 650

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 651  ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 710

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 711  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 770

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 771  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 830

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 831  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 890

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 891  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 950

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 951  KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1010

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1011 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1070

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1071 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1130

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1131 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1190

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1191 YHDSVFGGHSGFLR 1204

[Close]

BLAST of Cmc04g0120281 vs. ExPASy TrEMBL
Match: A0A5D3DMY9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00980 PE=4 SV=1)

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 531  LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 590

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 591  HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 650

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 651  ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 710

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 711  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 770

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 771  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 830

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 831  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 890

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 891  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 950

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 951  KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1010

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1011 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1070

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1071 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1130

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1131 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1190

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1191 YHDSVFGGHSGFLR 1204

[Close]

BLAST of Cmc04g0120281 vs. ExPASy TrEMBL
Match: A0A5A7T725 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003050 PE=4 SV=1)

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 974  LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 1033

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 1034 HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 1093

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 1094 ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 1153

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 1154 PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 1213

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 1214 PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 1273

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 1274 GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 1333

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 1334 NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 1393

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 1394 KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1453

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1454 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1513

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1514 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1573

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1574 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1633

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1634 YHDSVFGGHSGFLR 1647

[Close]

BLAST of Cmc04g0120281 vs. ExPASy TrEMBL
Match: A0A5D3C9P5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00120 PE=4 SV=1)

HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 663/674 (98.37%), Postives = 668/674 (99.11%), Query Frame = 0


Query: 1    MGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 60
            +GLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL
Sbjct: 1053 LGLALQETPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWL 1112

Query: 61   HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 120
            HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL
Sbjct: 1113 HSLGVTEVDWKRLVLTFHHQGKKVVIRGDPSLIKTRVSLKNLMKTWGADDQGFLVECRTL 1172

Query: 121  ECGKMEDEQEQGRGKVEAEPIAALLKRFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 180
            ECGK+EDEQ+QGRGKVEAEPIA LLK+FARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR
Sbjct: 1173 ECGKLEDEQDQGRGKVEAEPIATLLKQFARVFEWPATLPPQRTIEHHIYLKSGTDPVNVR 1232

Query: 181  PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 240
            PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI
Sbjct: 1233 PYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTI 1292

Query: 241  PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 300
            PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF
Sbjct: 1293 PDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPF 1352

Query: 301  GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 360
            GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV
Sbjct: 1353 GLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSQGMDEHVQHLEVVLGLLQDRELFV 1412

Query: 361  NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 420
            NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV
Sbjct: 1413 NMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVSEWPTPTNVREVRGFLGLTGYYRRFV 1472

Query: 421  KNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 480
            KNYG IAAPLTQLLKKGTYKWDAEAE AFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV
Sbjct: 1473 KNYGTIAAPLTQLLKKGTYKWDAEAEGAFNKLKKAMMTLPVLTMPDFNLPFEIESDASGV 1532

Query: 481  GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 540
            GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR
Sbjct: 1533 GVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQR 1592

Query: 541  SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 600
            SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM
Sbjct: 1593 SLKFLLEQRVVQPQYQKWVAKLLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPM 1652

Query: 601  IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 660
            IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT
Sbjct: 1653 IDMEIIKEETKLDPALQEITRILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHT 1712

Query: 661  YHDSVFGGALGILK 675
            YHDSVFGG  G L+
Sbjct: 1713 YHDSVFGGHSGFLR 1726

[Close]

BLAST of Cmc04g0120281 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-36
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 343 VQHLEVVLGLLQDRELFVNMEKCSFAKPRISYLG--HFISEQGLEADPEKIRAVSEWPTP 402
           + HL +VL + +  + + N +KC+F +P+I+YLG  H IS +G+ ADP K+ A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 403 TNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGTYKWDAEAEDAFNKLKKAMMTLP 462
            N  E+RGFLGLTGYYRRFVKNYG I  PLT+LLKK + KW   A  AF  LK A+ TLP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 463 VLTMPDFNLPF 472
           VL +PD  LPF
Sbjct: 121 VLALPDLKLPF 131

[Close]

BLAST of Cmc04g0120281 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 53.1 bits (126), Expect = 9.8e-07
Identity = 28/99 (28.28%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 8   TPNYGVILGSGTAVKGKGMCRSVEVQLDGWKVTDSFLPLQLG--GVDMILGMQWLHSLGV 67
           T    V+LG    ++  G C  + + +   ++T++FL L L    VD+ILG +WL  LG 
Sbjct: 163 TNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGE 222

Query: 68  TEVDWKRLVLTFHHQGKKVVI---RGDPSLIKTRVSLKN 102
           T V+W+    +F H  + + +     +   + T+V +K+
Sbjct: 223 TMVNWQNQDFSFSHNQQWITLCAEHEELEQVTTKVKMKS 261

[Close]

BLAST of Cmc04g0120281 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 8.3e-06
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 188 QKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSW 227
           ++  ++  + EML + II+PS SPYSSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc04g0120281 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055700.1	0.0e+00	98.96	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038753.1	0.0e+00	98.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK08591.1	0.0e+00	98.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0033982.1	0.0e+00	98.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK24981.1	0.0e+00	98.37	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0120281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	4.1e-98	41.59	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	3.4e-97	41.99	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	5.0e-96	36.65	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	1.5e-92	37.32	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.5e-92	37.13	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc04g0120281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKN8	0.0e+00	98.96	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SS61	0.0e+00	98.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DMY9	0.0e+00	98.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T725	0.0e+00	98.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C9P5	0.0e+00	98.37	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc04g0120281 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.2e-36	54.20	DNA/RNA polymerases superfamily protein	[more]
AT3G29750.1	9.8e-07	28.28	Eukaryotic aspartyl protease family protein	[more]
ATMG00850.1	8.3e-06	56.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 388..469 e-value: 1.0E-29 score: 104.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 244..379 e-value: 1.4E-92 score: 310.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 219..377 e-value: 7.3E-31 score: 107.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 200..379 score: 16.19376
None	No IPR available	PFAM	PF08284	RVP_2	coord: 20..65 e-value: 2.9E-5 score: 23.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 164..304 e-value: 1.4E-92 score: 310.8
None	No IPR available	GENE3D	3.10.20.370		coord: 470..537 e-value: 3.1E-11 score: 45.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 17..330
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 417..646 coord: 17..330
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 417..646
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 472..587 e-value: 1.23023E-47 score: 161.892
None	No IPR available	CDD	cd01647	RT_LTR	coord: 203..379 e-value: 3.53722E-97 score: 294.503
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 1..61 e-value: 1.85723E-8 score: 50.4128
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 441..535 e-value: 3.9E-32 score: 110.2
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..88 e-value: 1.7E-8 score: 36.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 145..571

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0120281.1	Cmc04g0120281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006488	dolichol-linked oligosaccharide biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding