Cmc04g0117321 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0117321
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	golgin subfamily A member 6-like protein 22
Location	CMiso1.1chr04: 34534890 .. 34538027 (+)
RNA-Seq Expression	Cmc04g0117321
Synteny	Cmc04g0117321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGTTCTTTTGATATCATCTATCTTATCTATCTTCGGCTACGCCACAGTTTTAGCCTGTTGGAAGGAAACGTCTGAAAAAAAAAAAAGGATCATAGTTTCTATGGAACTGTTAGTCCCTATAAATAATTTTACTTGTTTTTGTTTTTCTTGAGCCATTCTTGACAGCTTTTGTAGGAGCATAAGATCAGATTCATCCATCACAATCTTCAGGTGATAATTTTTTTTATTACCATCCTGTCAGCATAGTTTAATTAGTTAACACATATATCTCCTTGTTTTATGTGTTGTAAAGGCATAACCCCCTCTGCTAATTGGTTATTACATATTTTTGAACTTTCAATTCAGTGGGAATGAATGAATGTTTTTAATTGTTCGAGTAATGTTTATGTTAGATATAACTTCAACTTTGGTAGTCATAATTATGTTGGAGAATAGATAATTTGTTTTTAGGAGATATGGATAAAGAATAAGGACTTTGTTTTTTTAGTACAACAAAGGTTTCATGAAAGGTAATAGATTCCTTGATCAATGAGCACAATATATTCGTCCATCAAGCCAAGCAACTGATGTAGAAAAGCCAAGCAGTTAACTTAAAAGGAAGAATTTCTTTTATAATAATAAATCATAATTGTTAAAGTCGAGGAAGTAATATCGACTTTTTTTTTTTATTGGTGTAAACAGTCTATGAAAAAATGGTTGGTTTTATGTCGTTTTAAAGAGATGTAAGAATTCCATTCTGAGGATCATTTGGGAAGTGTAGGAGGATAAAGTGTATAAAAAGTTTAATAAAGGGTGTTTAGTATGTCCTTTGAAAGAAGTGTTTTAGGGCAAAAATGCTTCTACATAATCATTTTTAAAGAGAAATCACCTTTAATTAGTGGAAACACATTTTCTCTACAATTTTAAACAAATACAATTCCCTAAAAAGAAAAACTTTTGTTCAATCTTAATCTTTTGGCACTATTTAATTATGTCTCTACTTGTAGAATCTACAATCGTTGGTGATCGAAACAATTTCCTTAAAGGTTATGCTAAGTTTGAAATATAAGAATAGAATAACAGGAAACTTCTTTAATCCATAGAAACCAATATATTAATTCAGCTCAAAGAAATTCCCCGAGCCTTAAAAAGAAAGTTTTGTAGCCATGGAATTGTTAAAAGCGAAGGACAATCTGATTTAACAGATTGCTAAAGAATCTTCTACATCGTTTTGATCAAGAGAAGTTCAACACTCTCTCTTTTCTTCTTTCATTTTGAAACAACAATTCATCAGAGACGGGGTGCATGCTACGGTCCAAGAAATTGAGCTACAGTGTCGACCATTCAAAAATCGACTGGACGTTGGAGACGACCAAGCAAATTGATTATCCTATGGCAAATACATCCTCGAAGACGGGTAATTTTGAGCCAATGTTTTTGAAAGTTGGCATTCCCTTAGCTTTATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAGGGTTCCTTTCCATCTTCCTTAAATCCCTTCAAACCCAGATCAAAGATCATGAAAAATGAGAACTTTCACTCATCTTCAATCTCTTTAGAGGAAGAAAAAACTTCACAGCTCAATGTTGAAGAAGTGATTCTAAGCTTAAAAGGCAGAGTTGAAGATCTTGAAAGGAAAGAATTGGACATAGAGAGGCAATTCGTTTGGTACCAAAATTTAAAAGAAAGAGAAGCTCTATTAGTGGAGCTTAGAAACACTTTGGTTTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGAAGAAGAAAACAAGAGGTTTGAGAATTTGGTAACAGAATATTTGGGAGTTTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAAGAGACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATAATTGAGAGATTGGGAAATGAAGTAAATGAGCTGAAAATGCAAATGGGTCGTCAATTGGAAGAGGAGAAGAACCAAGATTCATCCACACCAAAGGTTTCATCTTTTTTGCCTTTTTGCACTCAATTTTCATCTACTCTATGAGTTTCTATTATGAGAAATCACACAGGGAAACAAAACCAATTTCTAAAATTTATGAGTTTTTCTATTAGGAAGAAGATTCATAAAACTGTTTTTAAAATATTAATTCATAATAAGTTGAATCCGGTTTTGTTCATTTTGAAATATCTATTCATTTTTTGTACTTAATTTGAAACATTTGTTCTTGTATTTTAAAAAAAGTTTATTTTGATCATTGTATTGTTAGCTTTGGTTCATTTTTATCTTATTATTTTAAAAAAGTGACCATTTTGATATTTTAAAATAAAAAAACATAAACCGATTAAAATGGTTATCTTTTAGAAGTATATGAATTAATCAACACTTCAAAAGTATATAAACTCAAATGAACAAAAGTTGAAAATAAAAAAACAAACATCCGTCTTGTATAATTTAGTATTTCATGAATATGAATATTTTTTCTTCTAACCAATGTAGAACTTTGACTGTACATTCATCAATTCGATAATAGCGTATTTGGCTAATTCACGAGGCTTCTTGTTCTTTCTAGATTGAAACAGAAAAACCAGTAACAATGGATGATTTAAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACTGCAAGGCCAGAAAGAAAATCCCAAGAAAGAAGAAAGAAATAACAAAGCGTTGGATCAAAATGAATTATCATCTGATGAAACTAATTCCACAAGGCCAAAGCTTCTTCAAAGGATAAGTTGTGTTAGGGGAAATGAAAAGATGAAAAGAAAAACAAGACCAGAATAAGATGAATTTTACTTATTTTATTTTACTTTTTCCTGTTCTGCTGCTTATTTATATTTGGGCAAAAAAGTGACATTTTAATCCATTTTATGTGAATTACTTTCAAAATTATGACATTCTGTTTGAGCCATTGTTCTTATGTAACAAGATTGGTTTATCCACAGTCTTTGTTATTTTTGTTTCTTG

mRNA sequence

GCTGTTCTTTTGATATCATCTATCTTATCTATCTTCGGCTACGCCACAGTTTTAGCCTGTTGGAAGGAAACGTCTGAAAAAAAAAAAAGGATCATAGTTTCTATGGAACTGTTAGTCCCTATAAATAATTTTACTTGTTTTTGTTTTTCTTGAGCCATTCTTGACAGCTTTTGTAGGAGCATAAGATCAGATTCATCCATCACAATCTTCAGACGGGGTGCATGCTACGGTCCAAGAAATTGAGCTACAGTGTCGACCATTCAAAAATCGACTGGACGTTGGAGACGACCAAGCAAATTGATTATCCTATGGCAAATACATCCTCGAAGACGGGTAATTTTGAGCCAATGTTTTTGAAAGTTGGCATTCCCTTAGCTTTATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAGGGTTCCTTTCCATCTTCCTTAAATCCCTTCAAACCCAGATCAAAGATCATGAAAAATGAGAACTTTCACTCATCTTCAATCTCTTTAGAGGAAGAAAAAACTTCACAGCTCAATGTTGAAGAAGTGATTCTAAGCTTAAAAGGCAGAGTTGAAGATCTTGAAAGGAAAGAATTGGACATAGAGAGGCAATTCGTTTGGTACCAAAATTTAAAAGAAAGAGAAGCTCTATTAGTGGAGCTTAGAAACACTTTGGTTTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGAAGAAGAAAACAAGAGGTTTGAGAATTTGGTAACAGAATATTTGGGAGTTTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAAGAGACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATAATTGAGAGATTGGGAAATGAAGTAAATGAGCTGAAAATGCAAATGGGTCGTCAATTGGAAGAGGAGAAGAACCAAGATTCATCCACACCAAAGATTGAAACAGAAAAACCAGTAACAATGGATGATTTAAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACTGCAAGGCCAGAAAGAAAATCCCAAGAAAGAAGAAAGAAATAACAAAGCGTTGGATCAAAATGAATTATCATCTGATGAAACTAATTCCACAAGGCCAAAGCTTCTTCAAAGGATAAGTTGTGTTAGGGGAAATGAAAAGATGAAAAGAAAAACAAGACCAGAATAAGATGAATTTTACTTATTTTATTTTACTTTTTCCTGTTCTGCTGCTTATTTATATTTGGGCAAAAAAGTGACATTTTAATCCATTTTATGTGAATTACTTTCAAAATTATGACATTCTGTTTGAGCCATTGTTCTTATGTAACAAGATTGGTTTATCCACAGTCTTTGTTATTTTTGTTTCTTG

Coding sequence (CDS)

ATGCTACGGTCCAAGAAATTGAGCTACAGTGTCGACCATTCAAAAATCGACTGGACGTTGGAGACGACCAAGCAAATTGATTATCCTATGGCAAATACATCCTCGAAGACGGGTAATTTTGAGCCAATGTTTTTGAAAGTTGGCATTCCCTTAGCTTTATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAGGGTTCCTTTCCATCTTCCTTAAATCCCTTCAAACCCAGATCAAAGATCATGAAAAATGAGAACTTTCACTCATCTTCAATCTCTTTAGAGGAAGAAAAAACTTCACAGCTCAATGTTGAAGAAGTGATTCTAAGCTTAAAAGGCAGAGTTGAAGATCTTGAAAGGAAAGAATTGGACATAGAGAGGCAATTCGTTTGGTACCAAAATTTAAAAGAAAGAGAAGCTCTATTAGTGGAGCTTAGAAACACTTTGGTTTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGAAGAAGAAAACAAGAGGTTTGAGAATTTGGTAACAGAATATTTGGGAGTTTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAAGAGACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATAATTGAGAGATTGGGAAATGAAGTAAATGAGCTGAAAATGCAAATGGGTCGTCAATTGGAAGAGGAGAAGAACCAAGATTCATCCACACCAAAGATTGAAACAGAAAAACCAGTAACAATGGATGATTTAAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACTGCAAGGCCAGAAAGAAAATCCCAAGAAAGAAGAAAGAAATAACAAAGCGTTGGATCAAAATGAATTATCATCTGATGAAACTAATTCCACAAGGCCAAAGCTTCTTCAAAGGATAAGTTGTGTTAGGGGAAATGAAAAGATGAAAAGAAAAACAAGACCAGAATAA

Protein sequence

MLRSKKLSYSVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGRQLEEEKNQDSSTPKIETEKPVTMDDLNKLSNEFNQLKDEFEVFRKQEQELQGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE

Homology

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BLAST of Cmc04g0117321 vs. NCBI nr
Match: XP_008442774.1 (PREDICTED: trichohyalin [Cucumis melo])

HSP 1 Score: 655.6 bits (1690), Expect = 2.5e-184
Identity = 360/366 (98.36%), Postives = 360/366 (98.36%), Query Frame = 0


Query: 1   MLRSKKLSYSVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60
           MLRSKKLSY VDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC
Sbjct: 1   MLRSKKLSYGVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60

Query: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120
           GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE
Sbjct: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120

Query: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180
           RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE
Sbjct: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180

Query: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240
           YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK
Sbjct: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240

Query: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDSSTPKIETEKPVTMDDLNKLSNEFNQLKDEF 300
           KKIIERLGNEVNELKMQMGRQLEEEKNQD STPKIETEK VTMDDLNKLSNEFNQLKDEF
Sbjct: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDLSTPKIETEKLVTMDDLNKLSNEFNQLKDEF 300

Query: 301 EVFRK--QEQELQGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMK 360
           EVFRK  QEQE QGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMK
Sbjct: 301 EVFRKQEQEQEQQGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMK 360

Query: 361 RKTRPE 365
           RKTRPE
Sbjct: 361 RKTRPE 366

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BLAST of Cmc04g0117321 vs. NCBI nr
Match: XP_004138000.1 (interaptin [Cucumis sativus] >KGN59038.1 hypothetical protein Csa_002657 [Cucumis sativus])

HSP 1 Score: 525.0 bits (1351), Expect = 5.1e-145
Identity = 293/337 (86.94%), Postives = 311/337 (92.28%), Query Frame = 0


Query: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENFH 89
           MANTSSKTGNFEPMF KVGIPLA+SAAGGICGIMMAKGSFPSSLN FKP+SK+M+NENF 
Sbjct: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60

Query: 90  SSSISLEEEKTSQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNLKEREALLVELRNT 149
            SSI+ EEEKTSQ N EEVILSLK RVEDLE KELDIERQF+WYQNLKEREALLVELRNT
Sbjct: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120

Query: 150 LVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLEREVKRLKKRL 209
           LVLDMAHINFLEREILLM EEN+RFENLVTEYLGVSEQLEGQKTENKLLEREV++LKKRL
Sbjct: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180

Query: 210 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGRQLEEEKNQD 269
           KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKK+IERLGNEV ELK+QM  QLEEE NQ+
Sbjct: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDHQLEEENNQN 240

Query: 270 SSTPKIETEKPVTMDDLNKLSNEFNQLKDEFEVFRK--QEQELQGQKENPKKEERNNKAL 329
             T K  TEK VTM+DLNKLSNEFNQLKDEFEVFRK  QEQE +GQKENPKKEER+NKAL
Sbjct: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300

Query: 330 DQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE 365
           +QNE SSDETN TRPKLL+R+ CVRGNEKMKRKTRPE
Sbjct: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 337

[Close]

BLAST of Cmc04g0117321 vs. NCBI nr
Match: KAA0043939.1 (trichohyalin [Cucumis melo var. makuwa] >TYK25201.1 trichohyalin [Cucumis melo var. makuwa])

HSP 1 Score: 505.4 bits (1300), Expect = 4.2e-139
Identity = 273/280 (97.50%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 1   MLRSKKLSYSVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60
           MLRSKKLSY VDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC
Sbjct: 1   MLRSKKLSYGVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60

Query: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120
           GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE
Sbjct: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120

Query: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180
           RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE
Sbjct: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180

Query: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240
           YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK
Sbjct: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240

Query: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDSSTPKIETEKP 281
           KKIIERLGNEVNELKMQMGRQLEEEKNQD STPK+ +  P
Sbjct: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDLSTPKVSSFLP 280

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BLAST of Cmc04g0117321 vs. NCBI nr
Match: XP_038904867.1 (myosin-10 [Benincasa hispida])

HSP 1 Score: 495.4 bits (1274), Expect = 4.3e-136
Identity = 280/344 (81.40%), Postives = 308/344 (89.53%), Query Frame = 0


Query: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENF- 89
           MANTSSKT N  PMFLKVGIPLA+SAAGGIC IMMAKGSFP+SLN FKP+SK+MKNENF 
Sbjct: 1   MANTSSKTDNLGPMFLKVGIPLAISAAGGICAIMMAKGSFPTSLNLFKPKSKLMKNENFH 60

Query: 90  ---HSSSISLEEEKTSQL-----NVEEVILSLKGRVEDLERKELDIERQFVWYQNLKERE 149
              HSSSIS EEE+  +      NVEEVILS+KGRVEDLERKELDIERQF+WYQNLKERE
Sbjct: 61  SHNHSSSISFEEEEILETEGEKPNVEEVILSIKGRVEDLERKELDIERQFIWYQNLKERE 120

Query: 150 ALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLER 209
           ALLVEL+NTL+LD+AHINFLE+EILLMEEENKRFE+LVTEYLGVSEQLEGQKTENKLLER
Sbjct: 121 ALLVELKNTLLLDIAHINFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180

Query: 210 EVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGR 269
           EVK+LKKRLK+QSK+IREKNLKIEDSK+QLWRNNEEMETKK++IE+LG EV ELKMQM  
Sbjct: 181 EVKKLKKRLKDQSKIIREKNLKIEDSKTQLWRNNEEMETKKRMIEKLGKEVKELKMQMD- 240

Query: 270 QLEEEKNQDSSTPKIETEKPVTMDDLNKLSNEFNQLKDEFEVFRKQEQELQGQKENPKKE 329
           QL+E+KN+  ST KIE EK VTM+D NKLS E NQLKD FEVF+KQEQE QGQKENPK+ 
Sbjct: 241 QLQEDKNKALSTSKIEEEKSVTMEDFNKLSTELNQLKDAFEVFKKQEQEQQGQKENPKEG 300

Query: 330 ERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE 365
           ERN+KALDQNE SSD+TNSTRPKLLQRISCV GNEKMKRK RPE
Sbjct: 301 ERNHKALDQNESSSDKTNSTRPKLLQRISCVGGNEKMKRKIRPE 343

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BLAST of Cmc04g0117321 vs. NCBI nr
Match: XP_022144716.1 (golgin subfamily A member 6-like protein 22 [Momordica charantia])

HSP 1 Score: 384.0 bits (985), Expect = 1.4e-102
Identity = 231/361 (63.99%), Postives = 286/361 (79.22%), Query Frame = 0


Query: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSL-----NPFKPRSKIMK 89
           M NT+SK GNFEPM  K+GIPLALSAA  +C I+M++G FP+S+     N  KP+SK+ +
Sbjct: 1   MVNTTSKLGNFEPMLYKIGIPLALSAASSVCAIIMSRGGFPASIYKSKTNLLKPKSKLKE 60

Query: 90  NENFHS----SSISLEEEKT----SQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNL 149
           NEN HS    +S+SLEEE++    S+  +EEVI  L+ RVEDLE+KE++IERQF+WYQNL
Sbjct: 61  NENLHSQNSANSLSLEEEESSSSESEDRIEEVISGLRRRVEDLEKKEVEIERQFIWYQNL 120

Query: 150 KEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENK 209
           KERE+LLVELRNTLVLDMAHI+FLEREILLMEEENK+FE+LV+EYLGVSEQLEGQK+ENK
Sbjct: 121 KERESLLVELRNTLVLDMAHISFLEREILLMEEENKKFESLVSEYLGVSEQLEGQKSENK 180

Query: 210 LLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKM 269
           LL+REVK+L+K+LKEQSK+IREKNLKIE+ K+++WRN EEMETKKK+IE+LGNEV ELKM
Sbjct: 181 LLDREVKKLRKKLKEQSKIIREKNLKIEEIKAEVWRNGEEMETKKKVIEKLGNEVRELKM 240

Query: 270 QMGRQLEEEKNQDSSTPKIET-EKPVTMDDLNKLSNEFNQLKDEFE---VFRKQEQELQG 329
           Q+  +L+EE+N+ S+  K+E  E+ VT++D NKLSNEF QLKD F    + R  +QE Q 
Sbjct: 241 QL-EELQEEENRASAKFKVEADERSVTVEDFNKLSNEFKQLKDAFSKQGLSRNHDQEEQN 300

Query: 330 QKE--------NPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRG-NEKMKRKTRP 365
            KE           K+E   K LD+NE SS +TNSTRPKLL RISCV G NEKM+RK RP
Sbjct: 301 HKEIHEEVEGNEGVKQEIKGKNLDKNEFSSVKTNSTRPKLLPRISCVGGSNEKMERKIRP 360

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BLAST of Cmc04g0117321 vs. ExPASy TrEMBL
Match: A0A1S3B6H9 (trichohyalin OS=Cucumis melo OX=3656 GN=LOC103486552 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184
Identity = 360/366 (98.36%), Postives = 360/366 (98.36%), Query Frame = 0


Query: 1   MLRSKKLSYSVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60
           MLRSKKLSY VDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC
Sbjct: 1   MLRSKKLSYGVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60

Query: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120
           GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE
Sbjct: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120

Query: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180
           RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE
Sbjct: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180

Query: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240
           YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK
Sbjct: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240

Query: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDSSTPKIETEKPVTMDDLNKLSNEFNQLKDEF 300
           KKIIERLGNEVNELKMQMGRQLEEEKNQD STPKIETEK VTMDDLNKLSNEFNQLKDEF
Sbjct: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDLSTPKIETEKLVTMDDLNKLSNEFNQLKDEF 300

Query: 301 EVFRK--QEQELQGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMK 360
           EVFRK  QEQE QGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMK
Sbjct: 301 EVFRKQEQEQEQQGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMK 360

Query: 361 RKTRPE 365
           RKTRPE
Sbjct: 361 RKTRPE 366

[Close]

BLAST of Cmc04g0117321 vs. ExPASy TrEMBL
Match: A0A0A0LB83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748180 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.5e-145
Identity = 293/337 (86.94%), Postives = 311/337 (92.28%), Query Frame = 0


Query: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENFH 89
           MANTSSKTGNFEPMF KVGIPLA+SAAGGICGIMMAKGSFPSSLN FKP+SK+M+NENF 
Sbjct: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60

Query: 90  SSSISLEEEKTSQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNLKEREALLVELRNT 149
            SSI+ EEEKTSQ N EEVILSLK RVEDLE KELDIERQF+WYQNLKEREALLVELRNT
Sbjct: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120

Query: 150 LVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLEREVKRLKKRL 209
           LVLDMAHINFLEREILLM EEN+RFENLVTEYLGVSEQLEGQKTENKLLEREV++LKKRL
Sbjct: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180

Query: 210 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGRQLEEEKNQD 269
           KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKK+IERLGNEV ELK+QM  QLEEE NQ+
Sbjct: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDHQLEEENNQN 240

Query: 270 SSTPKIETEKPVTMDDLNKLSNEFNQLKDEFEVFRK--QEQELQGQKENPKKEERNNKAL 329
             T K  TEK VTM+DLNKLSNEFNQLKDEFEVFRK  QEQE +GQKENPKKEER+NKAL
Sbjct: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300

Query: 330 DQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE 365
           +QNE SSDETN TRPKLL+R+ CVRGNEKMKRKTRPE
Sbjct: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 337

[Close]

BLAST of Cmc04g0117321 vs. ExPASy TrEMBL
Match: A0A5D3DNL6 (Trichohyalin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003300 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 2.0e-139
Identity = 273/280 (97.50%), Postives = 275/280 (98.21%), Query Frame = 0


Query: 1   MLRSKKLSYSVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60
           MLRSKKLSY VDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC
Sbjct: 1   MLRSKKLSYGVDHSKIDWTLETTKQIDYPMANTSSKTGNFEPMFLKVGIPLALSAAGGIC 60

Query: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120
           GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE
Sbjct: 61  GIMMAKGSFPSSLNPFKPRSKIMKNENFHSSSISLEEEKTSQLNVEEVILSLKGRVEDLE 120

Query: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180
           RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE
Sbjct: 121 RKELDIERQFVWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTE 180

Query: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240
           YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK
Sbjct: 181 YLGVSEQLEGQKTENKLLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETK 240

Query: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDSSTPKIETEKP 281
           KKIIERLGNEVNELKMQMGRQLEEEKNQD STPK+ +  P
Sbjct: 241 KKIIERLGNEVNELKMQMGRQLEEEKNQDLSTPKVSSFLP 280

[Close]

BLAST of Cmc04g0117321 vs. ExPASy TrEMBL
Match: A0A6J1CU83 (golgin subfamily A member 6-like protein 22 OS=Momordica charantia OX=3673 GN=LOC111014337 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 6.8e-103
Identity = 231/361 (63.99%), Postives = 286/361 (79.22%), Query Frame = 0


Query: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSL-----NPFKPRSKIMK 89
           M NT+SK GNFEPM  K+GIPLALSAA  +C I+M++G FP+S+     N  KP+SK+ +
Sbjct: 1   MVNTTSKLGNFEPMLYKIGIPLALSAASSVCAIIMSRGGFPASIYKSKTNLLKPKSKLKE 60

Query: 90  NENFHS----SSISLEEEKT----SQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNL 149
           NEN HS    +S+SLEEE++    S+  +EEVI  L+ RVEDLE+KE++IERQF+WYQNL
Sbjct: 61  NENLHSQNSANSLSLEEEESSSSESEDRIEEVISGLRRRVEDLEKKEVEIERQFIWYQNL 120

Query: 150 KEREALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENK 209
           KERE+LLVELRNTLVLDMAHI+FLEREILLMEEENK+FE+LV+EYLGVSEQLEGQK+ENK
Sbjct: 121 KERESLLVELRNTLVLDMAHISFLEREILLMEEENKKFESLVSEYLGVSEQLEGQKSENK 180

Query: 210 LLEREVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKM 269
           LL+REVK+L+K+LKEQSK+IREKNLKIE+ K+++WRN EEMETKKK+IE+LGNEV ELKM
Sbjct: 181 LLDREVKKLRKKLKEQSKIIREKNLKIEEIKAEVWRNGEEMETKKKVIEKLGNEVRELKM 240

Query: 270 QMGRQLEEEKNQDSSTPKIET-EKPVTMDDLNKLSNEFNQLKDEFE---VFRKQEQELQG 329
           Q+  +L+EE+N+ S+  K+E  E+ VT++D NKLSNEF QLKD F    + R  +QE Q 
Sbjct: 241 QL-EELQEEENRASAKFKVEADERSVTVEDFNKLSNEFKQLKDAFSKQGLSRNHDQEEQN 300

Query: 330 QKE--------NPKKEERNNKALDQNELSSDETNSTRPKLLQRISCVRG-NEKMKRKTRP 365
            KE           K+E   K LD+NE SS +TNSTRPKLL RISCV G NEKM+RK RP
Sbjct: 301 HKEIHEEVEGNEGVKQEIKGKNLDKNEFSSVKTNSTRPKLLPRISCVGGSNEKMERKIRP 360

[Close]

BLAST of Cmc04g0117321 vs. ExPASy TrEMBL
Match: A0A6J1KUK1 (coiled-coil domain-containing protein 186 OS=Cucurbita maxima OX=3661 GN=LOC111498800 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-89
Identity = 214/363 (58.95%), Postives = 271/363 (74.66%), Query Frame = 0


Query: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGI-CGIMMAKGSFPSSLNPFKPRSKIMKNENF 89
           MANT+SK  N E   LK+GIPLALSAAGG+ CGIMMA+ SFP SLNPFK  S+++KNE+F
Sbjct: 1   MANTTSKLENSEQTLLKIGIPLALSAAGGVCCGIMMARSSFP-SLNPFKRISQLVKNESF 60

Query: 90  ----HSSSISLEEEKTSQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNLKEREALLV 149
               HS+ + L++++TS  N+EEV+L LK RVEDLERKEL IE+QF+WYQNLKE+EALL+
Sbjct: 61  DSQNHSAPLPLKQKETSP-NIEEVLLGLKNRVEDLERKELGIEKQFIWYQNLKEKEALLM 120

Query: 150 ELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLEREVKR 209
           EL+NTLVLDMAHI FLE+EILLMEEENKRFE+LVTEYLGVSEQ EGQK EN+LLEREVK+
Sbjct: 121 ELKNTLVLDMAHIRFLEKEILLMEEENKRFESLVTEYLGVSEQFEGQKPENRLLEREVKK 180

Query: 210 LKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGRQLEE 269
           LKKRLK+QSKMIREKNLKIE+S+++ WRNNEEME KK++IE+L NE+ ELKMQM      
Sbjct: 181 LKKRLKDQSKMIREKNLKIEESRTEFWRNNEEMERKKRMIEKLRNELRELKMQM------ 240

Query: 270 EKNQDSSTP-KIETEKPVTMDDLNKLS---NEFNQLKDEFEVFRKQEQ------------ 329
           E N  SS+P KIE EK VTM D++KLS   +E  Q ++  ++ +K+              
Sbjct: 241 ENNASSSSPFKIEEEKEVTMKDVSKLSIGNHEQEQKENHKDLDQKESSPDKTTRPKLTED 300

Query: 330 ----ELQGQKENPKKEERNNKALDQNELSSDETNSTRPKLLQRIS---CVRGNEKMKRKT 365
                +   ++  ++++ N+K L Q E S D+T  TRP+LL+RIS       N KMK+K 
Sbjct: 301 VNKLSIGNHEQEQEEQKENHKDLAQKESSPDKTKYTRPRLLRRISDSGSSEMNTKMKKKI 355

[Close]

BLAST of Cmc04g0117321 vs. TAIR 10
Match: AT2G36650.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 9.9e-22
Identity = 81/267 (30.34%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 38  GNFEPMFLKVGIPLALSAAGGICGIMMAKGS----FPSSLNPFKPRSKIMKNENFHSSSI 97
           G  +P+ L+V + + LSA G I    +++        S+ NP    S   +N+       
Sbjct: 11  GAMKPVILRVCVAIVLSATGLILARFVSRNEDNEVTSSTSNPESSSSPSRENDE------ 70

Query: 98  SLEEEKTSQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNLKEREALLVELRNTLVLD 157
             EEE  S    ++ ILSLK R E+L+RKE ++E  F  + NLK++E +L+E ++ L L+
Sbjct: 71  --EEEAESPNQQKQEILSLKSRFEELQRKEYEMELHFERFCNLKDQEVMLIEHKSILSLE 130

Query: 158 MAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLEREVKRLKKRLKEQS 217
            A ++F  +E+L MEEE+KR + LV  YL +  +++  ++EN LLE + K+L+++ K+  
Sbjct: 131 KAQLDFFRKEVLAMEEEHKRGQALVIVYLKLVGEIQELRSENGLLEGKAKKLRRKSKQLY 190

Query: 218 KMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGRQLEEEKNQDSSTP 277
           +++ E   KI   + +  +  +E+ETK  I++ L  +V +++  +   L+EEK +     
Sbjct: 191 RVVNESR-KIIGVEKEFLKCVDELETKNNIVKELEGKVKDMEAYVD-VLQEEKEELFMKS 250

Query: 278 KIETEKPVTMDDLNKLSNEFNQLKDEF 301
              T + V+++D  ++  E+ +LK ++
Sbjct: 251 SNSTSEMVSVEDYRRIVEEYEELKKDY 267

The following BLAST results are available for this feature:

BLAST of Cmc04g0117321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442774.1	2.5e-184	98.36	PREDICTED: trichohyalin [Cucumis melo]	[more]
XP_004138000.1	5.1e-145	86.94	interaptin [Cucumis sativus] >KGN59038.1 hypothetical protein Csa_002657 [Cucumi...	[more]
KAA0043939.1	4.2e-139	97.50	trichohyalin [Cucumis melo var. makuwa] >TYK25201.1 trichohyalin [Cucumis melo v...	[more]
XP_038904867.1	4.3e-136	81.40	myosin-10 [Benincasa hispida]	[more]
XP_022144716.1	1.4e-102	63.99	golgin subfamily A member 6-like protein 22 [Momordica charantia]	[more]

BLAST of Cmc04g0117321 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0117321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6H9	1.2e-184	98.36	trichohyalin OS=Cucumis melo OX=3656 GN=LOC103486552 PE=4 SV=1	[more]
A0A0A0LB83	2.5e-145	86.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748180 PE=4 SV=1	[more]
A0A5D3DNL6	2.0e-139	97.50	Trichohyalin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003300 ...	[more]
A0A6J1CU83	6.8e-103	63.99	golgin subfamily A member 6-like protein 22 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1KUK1	7.3e-89	58.95	coiled-coil domain-containing protein 186 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Cmc04g0117321 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36650.1	9.9e-22	30.34	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	COILS	Coil	Coil	coord: 286..313
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 237..264
None	No IPR available	COILS	Coil	Coil	coord: 188..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..364
None	No IPR available	PANTHER	PTHR31342:SF10	CHUP1-LIKE PROTEIN	coord: 30..299
IPR040265	Protein CHUP1-like	PANTHER	PTHR31342	PROTEIN CHUP1, CHLOROPLASTIC	coord: 30..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0117321.1	Cmc04g0117321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0009707	chloroplast outer membrane