Cmc04g0116001 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0116001
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Early nodulin-20-like
Location	CMiso1.1chr04: 33773318 .. 33775168 (+)
RNA-Seq Expression	Cmc04g0116001
Synteny	Cmc04g0116001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTTTGTTCCTAATGCAAATACCGCGCCACCCACAATCACTTACGATGCTCGCTTTCTTCTTCTTCTTCTTCCTTTCTCTTCCATTTCCTTCCACCATTTTCCTCTCTCTAACTCTCTGTTTCCGCCGCCATGGACGAGACTTCCGCTCTAAAACCAGACCCACCGTTTTCCAATCTCCGCCGGAAAAACTCCATCACGGTGCCCGTTGCCGTCCCATCTAAGTTAAACCTTCTCGCCGCCACCAAGCCCTCCCGCGGTGCGGAAGCATCCCCGCCGTTACCGTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCTGGGTCGTCTCCTTCCCTTGCATACACTTCCCTCAGAGACATTTTGCCGTCGAACACCGCCAGCAGCTCCCCCACCGCCGCCTCTGCTGCGAATTCAGGGTACGAGATCTCGATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCTTATCTTCAGCCGATGTCTTCCTCTCCAGGCTCCTCAGGACCTCACCTCCTCCGCCGTATTTGGCTCAGATTTTCAGCTTGTCTTAGCTTCCTCAACCTGCCCATAATTTCAAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGATCAATTTTGTCTAATAATGACGAACAGGGGAAATACAAAACAGCTCTTCTTTGACTGAAATCAATCATCTCTGTTTCTGTTCTGTTCTGTGTGTATTAATTAATGATTATATACACATACACCACCCCTATAAGTACAGTTGAAGAAGAAGAGGAAGAAACAAAAGAAGAAAAAAATAAAAATAAAAAAGGGATGTAAATGTTTGAAGAAAAAATTCCAAAATGAATCTATCTTGTGTTTTTTTGAGTTGGAGAGAGGGTTTTCAGTTCCTTTTTTCTTTTTGTACAGTTTTGTTTTGCAACTTCTAATGGGTTTTTTTCGATCCTCTGAATCGAGCTTGGTTGTGGTTTTGATCTTCATAAAAATAGTTTGTTTGGTCATGGAGGGGAAATTGCACATCAAATTCCTCCGTCGTGCCTGTGGAACGCCGACTATTAGAACCGAGTAAAGGAGCACTTGGAAACCATTTCCTAGCCTTACTCCTGCTCGAATCTTTGCTTTGCCTTGGAGGTTTCCGGAAGAACGAAGGCAGCTCGTTTGGAGGTGGCGGTGGCGCTGGTGGCGCACTTGGAGTTGGATGATGCTCGTTCCTCTGCAAAATGTCAGTTTACATCTCTAATCAAATGAAACATAGATACTCTTGCCTGGGATCAATTCTTGGTGGGGTTTTTGTAAATGTCTTAAAGAGAATGGAAAAAGTAAGTGCTGTTTCCTTGTAATTTTGTTTAGCTACTAAAACTAAAAGGGCAGTTTCACTTTCACATATCCTTCAAAGAGGAGGATAATTCATAATCGAAAAATTACCCTTGTTTGTGGGGGTGCTGAAGCTGCTGGCCTAGAGGGCTGAGAAGCCAAGTAGTTAAAAACTTGGACGATTGCTGATTGGCTCAATTCAGTGCAGTTTTTCCAGTAGAACAAGGCCAAATCCCAAGCCTTGACTCTCCAATCCACCATCTTCTGTTCAATATCCACTTCGTGTTTATCTACCAAGGGCCGTAGCAAAGTTTGGAACACATACCCTGTTCCCTGCATTGTTTCAGCCCCCATTAACAAACACAACACAACTTTCCTCGGCTTCTACAATGTTGTGTTCAAATTAAAACTAACAACTTACACCATATTCATAGATTACGTGATCCCTATATTTCCTGTGATTTTACATCTTTATCTAAACCTACTCTCGGAATAACTCCACAAAAATCGAGTAGATCATTCCTTATCCCCAA

mRNA sequence

ATTGTTTGTTCCTAATGCAAATACCGCGCCACCCACAATCACTTACGATGCTCGCTTTCTTCTTCTTCTTCTTCCTTTCTCTTCCATTTCCTTCCACCATTTTCCTCTCTCTAACTCTCTGTTTCCGCCGCCATGGACGAGACTTCCGCTCTAAAACCAGACCCACCGTTTTCCAATCTCCGCCGGAAAAACTCCATCACGGTGCCCGTTGCCGTCCCATCTAAGTTAAACCTTCTCGCCGCCACCAAGCCCTCCCGCGGTGCGGAAGCATCCCCGCCGTTACCGTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCTGGGTCGTCTCCTTCCCTTGCATACACTTCCCTCAGAGACATTTTGCCGTCGAACACCGCCAGCAGCTCCCCCACCGCCGCCTCTGCTGCGAATTCAGGGTACGAGATCTCGATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCTTATCTTCAGCCGATGTCTTCCTCTCCAGGCTCCTCAGGACCTCACCTCCTCCGCCGTATTTGGCTCAGATTTTCAGCTTGTCTTAGCTTCCTCAACCTGCCCATAATTTCAAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGATCAATTTTGTCTAATAATGACGAACAGGGGAAATACAAAACAGCTCTTCTTTGACTGAAATCAATCATCTCTGTTTCTGTTCTGTTCTGTGTGTATTAATTAATGATTATATACACATACACCACCCCTATAAGTACAGTTGAAGAAGAAGAGGAAGAAACAAAAGAAGAAAAAAATAAAAATAAAAAAGGGATGTAAATGTTTGAAGAAAAAATTCCAAAATGAATCTATCTTGTGTTTTTTTGAGTTGGAGAGAGGGTTTTCAGTTCCTTTTTTCTTTTTGTACAGTTTTGTTTTGCAACTTCTAATGGGTTTTTTTCGATCCTCTGAATCGAGCTTGGTTGTGGTTTTGATCTTCATAAAAATAGTTTGTTTGGTCATGGAGGGGAAATTGCACATCAAATTCCTCCGTCGTGCCTGTGGAACGCCGACTATTAGAACCGAGTAAAGGAGCACTTGGAAACCATTTCCTAGCCTTACTCCTGCTCGAATCTTTGCTTTGCCTTGGAGGTTTCCGGAAGAACGAAGGCAGCTCGTTTGGAGGTGGCGGTGGCGCTGGTGGCGCACTTGGAGTTGGATGATGCTCGTTCCTCTGCAAAATGTCAGTTTACATCTCTAATCAAATGAAACATAGATACTCTTGCCTGGGATCAATTCTTGGTGGGGTTTTTGTAAATGTCTTAAAGAGAATGGAAAAAGTAAGTGCTGTTTCCTTGTAATTTTGTTTAGCTACTAAAACTAAAAGGGCAGTTTCACTTTCACATATCCTTCAAAGAGGAGGATAATTCATAATCGAAAAATTACCCTTGTTTGTGGGGGTGCTGAAGCTGCTGGCCTAGAGGGCTGAGAAGCCAAGTAGTTAAAAACTTGGACGATTGCTGATTGGCTCAATTCAGTGCAGTTTTTCCAGTAGAACAAGGCCAAATCCCAAGCCTTGACTCTCCAATCCACCATCTTCTGTTCAATATCCACTTCGTGTTTATCTACCAAGGGCCGTAGCAAAGTTTGGAACACATACCCTGTTCCCTGCATTGTTTCAGCCCCCATTAACAAACACAACACAACTTTCCTCGGCTTCTACAATGTTGTGTTCAAATTAAAACTAACAACTTACACCATATTCATAGATTACGTGATCCCTATATTTCCTGTGATTTTACATCTTTATCTAAACCTACTCTCGGAATAACTCCACAAAAATCGAGTAGATCATTCCTTATCCCCAA

Coding sequence (CDS)

ATGGACGAGACTTCCGCTCTAAAACCAGACCCACCGTTTTCCAATCTCCGCCGGAAAAACTCCATCACGGTGCCCGTTGCCGTCCCATCTAAGTTAAACCTTCTCGCCGCCACCAAGCCCTCCCGCGGTGCGGAAGCATCCCCGCCGTTACCGTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCTGGGTCGTCTCCTTCCCTTGCATACACTTCCCTCAGAGACATTTTGCCGTCGAACACCGCCAGCAGCTCCCCCACCGCCGCCTCTGCTGCGAATTCAGGGTACGAGATCTCGATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCTTATCTTCAGCCGATGTCTTCCTCTCCAGGCTCCTCAGGACCTCACCTCCTCCGCCGTATTTGGCTCAGATTTTCAGCTTGTCTTAGCTTCCTCAACCTGCCCATAATTTCAAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGATCAATTTTGTCTAA

Protein sequence

MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIKSSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV

Homology

[Close]

BLAST of Cmc04g0116001 vs. NCBI nr
Match: XP_008442897.1 (PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa] >TYK25301.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MDETSALKPDPPFSNLRR+NSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cmc04g0116001 vs. NCBI nr
Match: XP_011652026.1 (uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical protein Csa_001918 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MD+TSALKPD PFSNLRR+NSITVPVAVPSKLNLLAATK SRGAEASP LPLAFELVPIK
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSL+DILPS TASSSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cmc04g0116001 vs. NCBI nr
Match: XP_038904448.1 (uncharacterized protein LOC120090813 [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 6.6e-71
Identity = 150/168 (89.29%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MDETSALKPDPP SNLRR+NSIT+PVAVPSKLNLLA TK      ASPPLPLAFELVPIK
Sbjct: 1   MDETSALKPDPPLSNLRRRNSITLPVAVPSKLNLLAPTK-----AASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSLRDILPS TA SSPTAASAANSGYEI+IRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEITIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHL RRIWLRFSACLSFLNLPIIS I NAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLFRRIWLRFSACLSFLNLPIISRIANAFDRIFRVVGVNFV 163

[Close]

BLAST of Cmc04g0116001 vs. NCBI nr
Match: XP_023526406.1 (uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 3.0e-68
Identity = 145/168 (86.31%), Postives = 154/168 (91.67%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MD+TSALKPDPP  NLRR+NSITVPV VPSKLNLLAATK SRG  +SPPLPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPS TA  SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSSP-SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISS+TNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 167

[Close]

BLAST of Cmc04g0116001 vs. NCBI nr
Match: XP_022983125.1 (uncharacterized protein LOC111481768 [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MD+TSALKPDPP  NLRR+NSITVPV V SKLNLLAATK SRG  +SPPLPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVSSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPS TA  SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISSITNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSITNAFNRIFRVVGVSFV 166

[Close]

BLAST of Cmc04g0116001 vs. ExPASy TrEMBL
Match: A0A5A7TKK1 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004370 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.1e-83
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MDETSALKPDPPFSNLRR+NSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cmc04g0116001 vs. ExPASy TrEMBL
Match: A0A1S3B6B1 (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.1e-83
Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MDETSALKPDPPFSNLRR+NSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cmc04g0116001 vs. ExPASy TrEMBL
Match: A0A0A0LE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.6e-77
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MD+TSALKPD PFSNLRR+NSITVPVAVPSKLNLLAATK SRGAEASP LPLAFELVPIK
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSL+DILPS TASSSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Cmc04g0116001 vs. ExPASy TrEMBL
Match: A0A6J1J4V9 (uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.3e-68
Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MD+TSALKPDPP  NLRR+NSITVPV V SKLNLLAATK SRG  +SPPLPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVSSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPS TA  SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISSITNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSITNAFNRIFRVVGVSFV 166

[Close]

BLAST of Cmc04g0116001 vs. ExPASy TrEMBL
Match: A0A6J1F639 (uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC111442465 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.6e-67
Identity = 143/168 (85.12%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MDETSALKPDPPFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60
           MD+TSALKPDPP  NLRR+NSITVPV VPSKL+LLAATK SRG  +SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLSLLAATKSSRGVASSPQLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPS TA  SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISS+TNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 166

[Close]

BLAST of Cmc04g0116001 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 63/162 (38.89%), Postives = 81/162 (50.00%), Query Frame = 0


Query: 12  PFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIKSSSSGSSPSLA 71
           P + LRR  SI       S +  L   +      ++PP    +EL+ +K SS      +A
Sbjct: 9   PATQLRRTKSI-------SNMTTLTPPEVPFDIASTPPSSFDYELISVKPSS-----FVA 68

Query: 72  YTSLRDI----------LPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQP--MS 131
           YTSLRDI          LPS   S SP  ++AA    +ISIRNRLVKQAA +YLQP  ++
Sbjct: 69  YTSLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVLT 128

Query: 132 SSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFR 162
           SS  S+G    RR+WL  SA   FL           FD IF+
Sbjct: 129 SSDDSAGSQFFRRVWLHLSAGFQFLR--------RVFDWIFQ 147

[Close]

BLAST of Cmc04g0116001 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 63/162 (38.89%), Postives = 81/162 (50.00%), Query Frame = 0


Query: 12  PFSNLRRKNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIKSSSSGSSPSLA 71
           P + LRR  SI       S +  L   +      ++PP    +EL+ +K SS      +A
Sbjct: 9   PATQLRRTKSI-------SNMTTLTPPEVPFDIASTPPSSFDYELISVKPSS-----FVA 68

Query: 72  YTSLRDI----------LPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQP--MS 131
           YTSLRDI          LPS   S SP  ++AA    +ISIRNRLVKQAA +YLQP  ++
Sbjct: 69  YTSLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVLT 128

Query: 132 SSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFR 162
           SS  S+G    RR+WL  SA   FL           FD IF+
Sbjct: 129 SSDDSAGSQFFRRVWLHLSAGFQFLR--------RVFDWIFQ 147

[Close]

BLAST of Cmc04g0116001 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 51/113 (45.13%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 52  LAFELVPIKSSSSGSSPSLAYTSLRDILP-SNTASSSPT---AASAANSGYEISIRNRLV 111
           L  ELV +  SS    P   YTSL+DILP S+T   SP    A ++A SG  I+IRNRLV
Sbjct: 23  LDLELVSVNKSSEDPLP--CYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLV 82

Query: 112 KQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIF 161
           KQAA +YLQP + +P SS P  LRR+   F        + ++S+  +A  RIF
Sbjct: 83  KQAACSYLQPSTPTP-SSNPSFLRRVSSSF--------IRLVSAFFDALLRIF 124

The following BLAST results are available for this feature:

BLAST of Cmc04g0116001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442897.1	1.7e-82	99.40	PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 put...	[more]
XP_011652026.1	1.4e-76	94.64	uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical ...	[more]
XP_038904448.1	6.6e-71	89.29	uncharacterized protein LOC120090813 [Benincasa hispida]	[more]
XP_023526406.1	3.0e-68	86.31	uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]	[more]
XP_022983125.1	1.5e-67	86.31	uncharacterized protein LOC111481768 [Cucurbita maxima]	[more]

BLAST of Cmc04g0116001 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0116001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKK1	8.1e-83	99.40	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B6B1	8.1e-83	99.40	uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=...	[more]
A0A0A0LE45	6.6e-77	94.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1	[more]
A0A6J1J4V9	7.3e-68	86.31	uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768...	[more]
A0A6J1F639	3.6e-67	85.12	uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]

BLAST of Cmc04g0116001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	1.0e-13	38.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	1.0e-13	38.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	2.4e-10	45.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 8..159
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 8..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0116001.1	Cmc04g0116001.1	mRNA