Cmc04g0115511 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0115511
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ML domain-containing protein
Location	CMiso1.1chr04: 33474708 .. 33478476 (-)
RNA-Seq Expression	Cmc04g0115511
Synteny	Cmc04g0115511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTATAGAACTGTCAACGGTTTGCTTTGCTTCGGCTCAACTTCTCTTCATATTTTTTTGGGATTTTCTCTTCATCCCATTTGATAAACTCCGACGAAGAAGGGATTTTTCTCACTCACTTTAATGGCAATCGAATCTTTTTGTTTCTCCCATTCTACTCTACCCAAACCCCCGTTTTTATCGCAACCCCTGAGCTTCATTATTAGAAATTCTCAACTTTTTCTTTAAATTTGTTGTTACAGACCTCGAAAAGAGCATTTTCATGGAACCCACTTTTCAGATGAAGCTGATTTTTCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTCTCCTTTGCCACTCGAGTCCAACTCTGTGGTTTGTGCTTTCTGATTTCAATGCTTTTATTCCATTTCTAGACAGTTTTTGCTTTCCTTTATGAATTGTGGTCTTGTGGGTTCGATTATATAGTTTCTGATTCAGTTTTATAATCTTAGTTTTTGTTTTTTATGCTTATAATTTTACTGTTAAGCCACTTGTTAATGTCATTGTACTATTGAATACTTTTATTTGAAGCGTCGTTTCTTATTATTTTCCATTGATAGTTGCATTTCTGGTTATGTTATTTAACCCATCATAATCATACAGCTTCATTTTGTAACACTTCTTACACCCTTCAATTTATCACATCTCAGTGAGTGTTACGTGTTTGAAGGTGAATTTGAACTGATGATGGATGTGAGATAATTAATTAGATTGTAAACGAGGACTAAATATATCCTATGGAAGTCAAAGTCACCAGATTTTTTAAATAATGGGGTCAGGAACCACTTCCTACATTGTACTTATGACCCCCACCTCTAAGATCTCGTAACTCTAAATTTCTCAAATCCTTATCACTGGCATCCCTTGGGGTTCTATGGAAGTTTGATATTTTTTCTCTAATTTTGTTGAGCTTTGTTGTAAGAGAGTGGAGTTTAGTATTGTCGTGCATGTAATTGATATCTTTTCTGTAACTGATGCAGATGAGACCGCTGAGTATGATATCACGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCATCCAACAAATATGACCTTCAATCTACTTATAGGTACTTTCAGATATTCCACCTGGCCCTATTCATCATCTCTAGTATTACTGTTGCTGTTTATTTCAATGTTCTATGTTTTCTTTTTTTCACAAATTCATGCTGAAATTAACTATGAATCTCTTAAGATTTGGTGCAAATTCGTTCATCTAAAATAAATTTTGAAGGGAAAATTTAGTTGGTTTGGTGCTTAGCATAGAAAAGTACATCACTTTCTTATCCAAATAAATAAATAAATACATCACCTCATTCCATTTTAATTTGTGTGTGTGTATGTGTGCCTAGAATAAAATTTGACATGGTATCTTTATTCTTAAAACAAGGTATCTTAACCCTAGTGAGTGGGAGGTAAAAAAGAGTCAAACTTTGAAATAAGCAAAAAAAATTACCTGAAGATTCAATAATATTAAAAAAAAAAAAAAGAAATACAAGCACAACTTCTTTTCCTAGTTACAGGGCTGACATCTTCTTTTAACCATATCTATTCATCAGGACCGACTACCTTTCCTTTCTTCTATGGAGAATAATTAGTTCATGGGTCGTTAGATTGAGGTTACTTCAAACCGAAGTGTTAATTTGGACCATTTCATGCAAATTATTTGTCAAATTATGTCAAATTATTGTAAGCTCACTTTGCTTAGTACTGCTAACCTTTAGATTTGTAATCTTTTTATGGATAAGTAGGATTGGAGGATGCTACCTTATCACTTCTATTTTACTTCTAATTATCAACTGCCCTCCAGTTTAAATTTAACCCTCGAGAGAGAGAGAGGTATATCCCCTCCTGCTACCCCAAGTTGATCGAGCCTTTCTACTCATATATTGTCTTATGAAGTTTGGCCCAATCTTTAGTTAATGACAACAACCTGTACACGTCGCGCAGGTAATCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACTTGTCTGGTGATTTTGCACTCCCTCCACTGCGAACGCCTCTGGCATTCTTTTTACCTGTAAGTTACTACTATTTCCATGTTTACCACTTGTGTTTATCTTTTGCTTTTAGTTTCTGGTTTTCCACCCCTAAAATAAGTTAGAAGGAACGATGTTTTACCCTGACTTAGTTGATCTACTAAATAGTCTTAGGTCGTTCCTCATCCTGAATTGATATGAAGCATTTCTCTAATTTTCTTTCTACTTCAATTTCACCTTACAACTGGATGGACTCGCTTTATTTTAATGTTTTCTTTTAGTTTCATCTATTTCATTGGAATCTGATAGTAGTTCTAGCCCACCTTGAGGCATGAGTGTCCTCGGGTTTGAGGAGCAAAGCTCCAACTCCCTGTTAACAAAAAAACGTAGGAGTTATGTTAGCAGAGTTTTAATTATTGAAAATTAGAATATCATGTTAAGAGGTTCCTGGCAACGTTACTATCCAGAGAAACTAGGTTTTATTGAGATTAAATATCTTAGATATACGCACACAATTGATTTCTTTTTGACTTTAACTATTATCCATTCTAACTATTTCCTTTTTCTTGCAGGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGCTAAGAGATTTTATTTATTGATTATTCAGCTATTGATCTTTGTATATACGAACCCTTCTAGAGCTTTGCCATTTAGATCTTCGTTTGTTCCTTGGGCAGACAACATCTGCCTTGTGACTATTTGAAGAACTAATTCAGGAGAATGAGTAGTGAAAGTCGAGAAAAAAAATTGCATTGTGGGAGCATTGTACTAATACTTATCATCACGTGTCACACATTTCTTTGTTGTTTGTAGATACAGAGTGGAAAGTGAAACAATTAACTACTCCGATCCATTAGATTAAAATAAGATTCACTGTTTCAGGAAATATTCAAGTCTTTTCTTCATTCTTGTTTTAATGTGATCATTGATGTAAAGAAGTTTCTTACAATAGATGTTTGAATTCATGTACTTTATTTATATACACTTTAGAATTGATATTTTCTAGTCTCATATGTACATAATTACCACAAAAAGTTTCTTCATTGGACTGAGGACTGTAAGACCGTATAGTCAGAATTGATGAGAGGGGGACTTTGGTAATCCACCAAAGTCTATGAACAGTATAGGCATGCATTGTCCCCCAATGAATTATGGAGCTTGTCTATAAAGCACACGAGTTAAAGCATAGAAGGTTCGTTTTCTTCCATATAAATCATGATTGTGTGGTTTAGCCTCTGGCATTCACTCTTTTCATTTTGCTGCTTTTCTCATGAGCATACCAACTGGGTGGGGTCTGGTTCTTTCTTCTTCATCTTCATCATCGTTTATTTTTTCTTTATTTGATTAGTGTGTCATAACATGATTGATGGACCATTGTTGGTGATGGGTCAGAATAAGAGTTAGAAATAGTTGCCTCTCTAAACAATGGCAACCCAAGCCCCACTCTGCTAAAGTCATAAATTTATGCAGACTTCTGAAAGCAAACTAACAAACAGCTTTTTTTTTCCCTTCCAGCCTCCACTTTCTAGCTATTGTGGAATCCAGAAGTGAAAATGTGAGTT

mRNA sequence

TGTTTATAGAACTGTCAACGGTTTGCTTTGCTTCGGCTCAACTTCTCTTCATATTTTTTTGGGATTTTCTCTTCATCCCATTTGATAAACTCCGACGAAGAAGGGATTTTTCTCACTCACTTTAATGGCAATCGAATCTTTTTGTTTCTCCCATTCTACTCTACCCAAACCCCCGTTTTTATCGCAACCCCTGAGCTTCATTATTAGAAATTCTCAACTTTTTCTTTAAATTTGTTGTTACAGACCTCGAAAAGAGCATTTTCATGGAACCCACTTTTCAGATGAAGCTGATTTTTCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTCTCCTTTGCCACTCGAGTCCAACTCTGTGATGAGACCGCTGAGTATGATATCACGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCATCCAACAAATATGACCTTCAATCTACTTATAGGTAATCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACTTGTCTGGTGATTTTGCACTCCCTCCACTGCGAACGCCTCTGGCATTCTTTTTACCTGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGCTAAGAGATTTTATTTATTGATTATTCAGCTATTGATCTTTGTATATACGAACCCTTCTAGAGCTTTGCCATTTAGATCTTCGTTTGTTCCTTGGGCAGACAACATCTGCCTTGTGACTATTTGAAGAACTAATTCAGGAGAATGAGTAGTGAAAGTCGAGAAAAAAAATTGCATTGTGGGAGCATTGTACTAATACTTATCATCACGTGTCACACATTTCTTTGTTGTTTGTAGATACAGAGTGGAAAGTGAAACAATTAACTACTCCGATCCATTAGATTAAAATAAGATTCACTGTTTCAGGAAATATTCAAGTCTTTTCTTCATTCTTGTTTTAATGTGATCATTGATGTAAAGAAGTTTCTTACAATAGATGTTTGAATTCATGTACTTTATTTATATACACTTTAGAATTGATATTTTCTAGTCTCATATGTACATAATTACCACAAAAAGTTTCTTCATTGGACTGAGGACTGTAAGACCGTATAGTCAGAATTGATGAGAGGGGGACTTTGGTAATCCACCAAAGTCTATGAACAGTATAGGCATGCATTGTCCCCCAATGAATTATGGAGCTTGTCTATAAAGCACACGAGTTAAAGCATAGAAGCCTCCACTTTCTAGCTATTGTGGAATCCAGAAGTGAAAATGTGAGTT

Coding sequence (CDS)

ATGGAACCCACTTTTCAGATGAAGCTGATTTTTCCATTTCTTCTTTGGTTGTGCTTTTTTCCACAGTTCTCCTTTGCCACTCGAGTCCAACTCTGTGATGAGACCGCTGAGTATGATATCACGGTGAAAGGAGTAGAGATATCTCCCAGCCCCATAGTTAGGGGTCATCCAACAAATATGACCTTCAATCTACTTATAGGTAATCCAATCATTGCAGGAAAAATGGTAGTTGATATTTCATATTTCGGATGGCACATATATAGTGACAGCCATGACATTTGTGTTGAGACGTCCTGCCCTTACTTGTCTGGTGATTTTGCACTCCCTCCACTGCGAACGCCTCTGGCATTCTTTTTACCTGGTTCGTATCATATGCAGATAACCATTGTTGATGGAGATGATAATAAACTTACATGCTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTTGGAGATAGCTAA

Protein sequence

MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS

Homology

[Close]

BLAST of Cmc04g0115511 vs. NCBI nr
Match: XP_008442939.1 (PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo] >TYK25335.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 7.9e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP
Sbjct: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. NCBI nr
Match: XP_004136524.1 (MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 6.9e-83
Identity = 146/155 (94.19%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEP FQMKLIFPFLLWLCFFPQFSF+TR+QLCDETA+YDITVKGVEISP+P+VRGHPTNM
Sbjct: 1   MEPIFQMKLIFPFLLWLCFFPQFSFSTRLQLCDETAKYDITVKGVEISPNPVVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
            FNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP
Sbjct: 61  IFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. NCBI nr
Match: XP_038905833.1 (uncharacterized protein LOC120091785 [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 7.1e-80
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEPTFQMKLIFP LLWLCF PQFSFAT+VQLCDETA+YD+TVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPTFQMKLIFPILLWLCFVPQFSFATQVQLCDETAKYDVTVKGVEISPSPIVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNL+IG PIIAGKMVVDISYFGWHIYS+SHDICVETSCPY  GDFALPP RTPLAFFLP
Sbjct: 61  TFNLIIGKPIIAGKMVVDISYFGWHIYSESHDICVETSCPYSFGDFALPPSRTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKLTCF FDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLTCFRFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. NCBI nr
Match: XP_022151451.1 (uncharacterized protein LOC111019382 [Momordica charantia] >XP_022151452.1 uncharacterized protein LOC111019382 [Momordica charantia])

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74
Identity = 137/155 (88.39%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEP+FQMKLIF FL++LC   QFS AT VQLCDETA YDI VKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPSFQMKLIFAFLIYLCLVTQFSLATPVQLCDETATYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCPY  GDFAL PLRTPLAFF P
Sbjct: 61  TFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALTPLRTPLAFFFP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQIMIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. NCBI nr
Match: XP_022983145.1 (uncharacterized protein LOC111481784 [Cucurbita maxima] >XP_022983146.1 uncharacterized protein LOC111481784 [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 134/155 (86.45%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEPT  MKLIF  LLWLCF  QFSFATRVQLCDETA+YDI VKGV+ISPSPIVRG P  M
Sbjct: 1   MEPTSPMKLIFTLLLWLCFVLQFSFATRVQLCDETAKYDIMVKGVQISPSPIVRGRPITM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNL+IG PIIAGKMVVDISYFGWH+Y DSHDICVETSCPY  GDFAL PL+TPLAFFLP
Sbjct: 61  TFNLIIGKPIIAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLACFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. ExPASy Swiss-Prot
Match: Q9AST8 (MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=ROSY1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04
Identity = 35/121 (28.93%), Postives = 52/121 (42.98%), Query Frame = 0


Query: 14  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAG 73
           LL   FF       + Q CD   EY + V  VEISP P+ R     +T   +    I  G
Sbjct: 12  LLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGVTNKEISDG 71

Query: 74  KMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPPLRTPLAFFLPGSYHMQITIV 132
             V + ++   + + + S+ +C  T+CP   G     LP + TP        Y + I+I 
Sbjct: 72  VTVNLKLAVGMFPVSTKSYSLCDITACPVAPGPIVLTLPNIFTPREKRTAIGYTIIISIT 131

[Close]

BLAST of Cmc04g0115511 vs. ExPASy TrEMBL
Match: A0A5D3DP69 (Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004740 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.8e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP
Sbjct: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. ExPASy TrEMBL
Match: A0A1S3B7M8 (uncharacterized protein LOC103486693 OS=Cucumis melo OX=3656 GN=LOC103486693 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.8e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP
Sbjct: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. ExPASy TrEMBL
Match: A0A6J1DDJ6 (uncharacterized protein LOC111019382 OS=Momordica charantia OX=3673 GN=LOC111019382 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.7e-75
Identity = 137/155 (88.39%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEP+FQMKLIF FL++LC   QFS AT VQLCDETA YDI VKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPSFQMKLIFAFLIYLCLVTQFSLATPVQLCDETATYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNL+IG PIIAGKMVVDISYFGWHIYSDSHDICVETSCPY  GDFAL PLRTPLAFF P
Sbjct: 61  TFNLIIGKPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYSFGDFALTPLRTPLAFFFP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQI IVDGDDNKLTCFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQIMIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. ExPASy TrEMBL
Match: A0A6J1J1A9 (uncharacterized protein LOC111481784 OS=Cucurbita maxima OX=3661 GN=LOC111481784 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.0e-73
Identity = 134/155 (86.45%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           MEPT  MKLIF  LLWLCF  QFSFATRVQLCDETA+YDI VKGV+ISPSPIVRG P  M
Sbjct: 1   MEPTSPMKLIFTLLLWLCFVLQFSFATRVQLCDETAKYDIMVKGVQISPSPIVRGRPITM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNL+IG PIIAGKMVVDISYFGWH+Y DSHDICVETSCPY  GDFAL PL+TPLAFFLP
Sbjct: 61  TFNLIIGKPIIAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQITIVDGDDNKL CFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITIVDGDDNKLACFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. ExPASy TrEMBL
Match: A0A6J1FAL9 (uncharacterized protein LOC111442332 OS=Cucurbita moschata OX=3662 GN=LOC111442332 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 131/155 (84.52%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 1   MEPTFQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNM 60
           ME T  MKLI   LLWLCF  QFSFATRVQLCDETA+YDI VKGV+ISPSPIVRG P NM
Sbjct: 1   MELTSLMKLILTLLLWLCFVLQFSFATRVQLCDETAKYDIMVKGVQISPSPIVRGRPINM 60

Query: 61  TFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLP 120
           TFNL+IG PI+AGKMVVDISYFGWH+Y DSHDICVETSCPY  GDFAL PL+TPLAFFLP
Sbjct: 61  TFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP 120

Query: 121 GSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 156
           GSYHMQIT+VDGDDNKL CFGFDYELVIASLFGDS
Sbjct: 121 GSYHMQITVVDGDDNKLACFGFDYELVIASLFGDS 155

[Close]

BLAST of Cmc04g0115511 vs. TAIR 10
Match: AT3G11780.1 (MD-2-related lipid recognition domain-containing protein / ML domain-containing protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 52/129 (40.31%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 26  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWH 85
           AT V  CD   EY++ V+GV+I+P PI RG P     +      I +GK+V+++SYFGWH
Sbjct: 24  ATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIEVSYFGWH 83

Query: 86  IYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYE 145
           I+S++HD+C ETSCP   GDF +   +    +  PGSY +++ ++DG   +LTC  F ++
Sbjct: 84  IHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPGSYSLKMKMLDGRKKELTCIKFSFD 143

Query: 146 LVIASLFGD 155
           +   S   D
Sbjct: 144 IGFGSSVAD 152

[Close]

BLAST of Cmc04g0115511 vs. TAIR 10
Match: AT5G06480.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 51/129 (39.53%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 26  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWH 85
           A  V  C+E AEY++ VK V+ISP+PI  G P   T +   G  I  GK+V+++SYFGWH
Sbjct: 24  AIDVHYCEENAEYEVKVKEVDISPNPIAPGEPATFTISANTGREISFGKLVIEVSYFGWH 83

Query: 86  IYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHMQITIVDGDDNKLTCFGFDYE 145
           ++S++HD+C ETSCP  +GDF +   +    +  PGSY +++ ++D    +LTC  F ++
Sbjct: 84  VHSETHDLCTETSCPIQTGDFLVAHSQVLPGYTPPGSYLLKMKMLDAKKKELTCIKFSFD 143

Query: 146 LVIASLFGD 155
           + + +   D
Sbjct: 144 IGLRASVAD 152

[Close]

BLAST of Cmc04g0115511 vs. TAIR 10
Match: AT3G11780.2 (MD-2-related lipid recognition domain-containing protein / ML domain-containing protein )

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 26  ATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAGKMVVDISYFGWH 85
           AT V  CD   EY++ V+GV+I+P PI RG P     +      I +GK+V+++SYFGWH
Sbjct: 24  ATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIEVSYFGWH 83

Query: 86  IYSDSHDICVETSCPYLSGDF------ALPPLRTP------------LAFFLPGSYHMQI 145
           I+S++HD+C ETSCP   GDF       LP    P              F + GSY +++
Sbjct: 84  IHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPTEKRFNLVSIAYYEFHVEGSYSLKM 143

Query: 146 TIVDGDDNKLTCFGFDYELVIASLFGD 155
            ++DG   +LTC  F +++   S   D
Sbjct: 144 KMLDGRKKELTCIKFSFDIGFGSSVAD 170

[Close]

BLAST of Cmc04g0115511 vs. TAIR 10
Match: AT3G44100.1 (MD-2-related lipid recognition domain-containing protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 14  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAG 73
           LL   FF     AT    CD+  +  + V GV+ISP P+V G           G  I  G
Sbjct: 12  LLLSVFFLPALHATSFTYCDKRLD-PVKVTGVKISPDPVVSGAAATFKIFGSTGEDISGG 71

Query: 74  KMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFLPGSYHMQITIVDGD 133
           K+V+ + Y G  +++++HD+C ET+CP   G F L   +T  +   PG+Y +++TI D +
Sbjct: 72  KVVIRVLYVGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPSITPPGTYTLKMTINDKN 131

Query: 134 DNKLTCFGFDYELVIAS 151
             +LTC  F +++ + S
Sbjct: 132 GGRLTCISFKFKITVGS 147

[Close]

BLAST of Cmc04g0115511 vs. TAIR 10
Match: AT2G16005.1 (MD-2-related lipid recognition domain-containing protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05
Identity = 35/121 (28.93%), Postives = 52/121 (42.98%), Query Frame = 0


Query: 14  LLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTNMTFNLLIGNPIIAG 73
           LL   FF       + Q CD   EY + V  VEISP P+ R     +T   +    I  G
Sbjct: 12  LLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGVTNKEISDG 71

Query: 74  KMV-VDISYFGWHIYSDSHDICVETSCPYLSGD--FALPPLRTPLAFFLPGSYHMQITIV 132
             V + ++   + + + S+ +C  T+CP   G     LP + TP        Y + I+I 
Sbjct: 72  VTVNLKLAVGMFPVSTKSYSLCDITACPVAPGPIVLTLPNIFTPREKRTAIGYTIIISIT 131

The following BLAST results are available for this feature:

BLAST of Cmc04g0115511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442939.1	7.9e-87	100.00	PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo] >TYK25335.1 putat...	[more]
XP_004136524.1	6.9e-83	94.19	MD-2-related lipid-recognition protein ROSY1 [Cucumis sativus]	[more]
XP_038905833.1	7.1e-80	92.26	uncharacterized protein LOC120091785 [Benincasa hispida]	[more]
XP_022151451.1	2.0e-74	88.39	uncharacterized protein LOC111019382 [Momordica charantia] >XP_022151452.1 uncha...	[more]
XP_022983145.1	1.4e-72	86.45	uncharacterized protein LOC111481784 [Cucurbita maxima] >XP_022983146.1 uncharac...	[more]

BLAST of Cmc04g0115511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST8	3.0e-04	28.93	MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Cmc04g0115511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DP69	3.8e-87	100.00	Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cucumis m...	[more]
A0A1S3B7M8	3.8e-87	100.00	uncharacterized protein LOC103486693 OS=Cucumis melo OX=3656 GN=LOC103486693 PE=...	[more]
A0A6J1DDJ6	9.7e-75	88.39	uncharacterized protein LOC111019382 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1J1A9	7.0e-73	86.45	uncharacterized protein LOC111481784 OS=Cucurbita maxima OX=3661 GN=LOC111481784...	[more]
A0A6J1FAL9	2.9e-71	84.52	uncharacterized protein LOC111442332 OS=Cucurbita moschata OX=3662 GN=LOC1114423...	[more]

BLAST of Cmc04g0115511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11780.1	1.4e-28	40.31	MD-2-related lipid recognition domain-containing protein / ML domain-containing ...	[more]
AT5G06480.1	1.4e-28	39.53	Immunoglobulin E-set superfamily protein	[more]
AT3G11780.2	2.2e-26	37.41	MD-2-related lipid recognition domain-containing protein / ML domain-containing ...	[more]
AT3G44100.1	2.2e-18	33.58	MD-2-related lipid recognition domain-containing protein	[more]
AT2G16005.1	2.1e-05	28.93	MD-2-related lipid recognition domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003172	MD-2-related lipid-recognition domain	SMART	SM00737	pgtp_13	coord: 29..144 e-value: 2.1E-19 score: 80.5
IPR003172	MD-2-related lipid-recognition domain	PFAM	PF02221	E1_DerP2_DerF2	coord: 28..145 e-value: 2.8E-14 score: 53.6
None	No IPR available	GENE3D	2.60.40.770		coord: 27..149 e-value: 5.1E-8 score: 35.3
None	No IPR available	PANTHER	PTHR11306:SF0	OS07G0159800 PROTEIN	coord: 24..144
IPR039670	Sterol transport protein NPC2-like	PANTHER	PTHR11306	NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED	coord: 24..144
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 27..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0115511.1	Cmc04g0115511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015918	sterol transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding