Cmc04g0111941 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0111941
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPlant protein of unknown function (DUF247)
LocationCMiso1.1chr04: 30941777 .. 30942598 (-)
RNA-Seq ExpressionCmc04g0111941
SyntenyCmc04g0111941
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGAGAACCAGCTCCCTTTCTTCGTTATTCAAGGTCTTTTTTGCTTTATTTATCAACCAAACAATTATGACGATTGCTTCATGGTCTTAGTAAATATTGTACATAATTTTTTTCAAGTTAATTTCATAAAACATCATCGTGAGATTCCTCCAAATATCTTGTCCGCCCCTAACAAACATATAGGGCATCTGTTAGATTTCTTAGGCTTTTACTATCCCCCGGTCACTAAAGACATTAATCAAGGCAATAATAGATCGTTATTTCTTCCTCCATCTACGACTGAGCTGTATGAAGCTGGAGTCATCTTGGAGAAAGCAGTAACAACGAGTGATTACAACATTATGGGCATAAGTTTTGAAGGTGGGGTTCTTAAAATCCCACCATTTGAAATTCATGATCTCTTTGAAATCACTATGAGGAATTTGTTGGCGTTTGAGAATTTTCAAGGTGGAAGTGGGAGTGAAAGCTCTGCAATTCATTATATTTGGTTTTTAGGGGCTTTAATAAGTAAAGAGAAAGATTCAAGTTTACTTATGAAGAAGGGAATCTTAAGTAATCTTATTGGAGGAAGTGATGTAGAAGTTTCCAATATGTTCAATAATATTGGTAAAGGTGTGACATTTCGAGGACATTTTTACTATGATAGTACAAGCAGAAATTTACGTAAACACTGCGACGCAAGAAGTAACCGATGGATGGCTATATTGAAGCGTGATTATTTAAATACGCCATGGGCTATTGTTTCTTTAGTTTGTGTCACCATTGTCACTCTAATCACTTTGTTGAAAACCATAGTGTTCATGTATCATTTTATATAA

mRNA sequence

ATGCTCGAGAACCAGCTCCCTTTCTTCGTTATTCAAGGTCTTTTTTGCTTTATTTATCAACCAAACAATTATGACGATTGCTTCATGGTCTTAGTAAATATTGTACATAATTTTTTTCAAGTTAATTTCATAAAACATCATCGTGAGATTCCTCCAAATATCTTGTCCGCCCCTAACAAACATATAGGGCATCTGTTAGATTTCTTAGGCTTTTACTATCCCCCGGTCACTAAAGACATTAATCAAGGCAATAATAGATCGTTATTTCTTCCTCCATCTACGACTGAGCTGTATGAAGCTGGAGTCATCTTGGAGAAAGCAGTAACAACGAGTGATTACAACATTATGGGCATAAGTTTTGAAGGTGGGGTTCTTAAAATCCCACCATTTGAAATTCATGATCTCTTTGAAATCACTATGAGGAATTTGTTGGCGTTTGAGAATTTTCAAGGTGGAAGTGGGAGTGAAAGCTCTGCAATTCATTATATTTGGTTTTTAGGGGCTTTAATAAGTAAAGAGAAAGATTCAAGTTTACTTATGAAGAAGGGAATCTTAAGTAATCTTATTGGAGGAAGTGATGTAGAAGTTTCCAATATGTTCAATAATATTGGTAAAGGTGTGACATTTCGAGGACATTTTTACTATGATAGTACAAGCAGAAATTTACGTAAACACTGCGACGCAAGAAGTAACCGATGGATGGCTATATTGAAGCGTGATTATTTAAATACGCCATGGGCTATTGTTTCTTTAGTTTGTGTCACCATTGTCACTCTAATCACTTTGTTGAAAACCATAGTGTTCATGTATCATTTTATATAA

Coding sequence (CDS)

ATGCTCGAGAACCAGCTCCCTTTCTTCGTTATTCAAGGTCTTTTTTGCTTTATTTATCAACCAAACAATTATGACGATTGCTTCATGGTCTTAGTAAATATTGTACATAATTTTTTTCAAGTTAATTTCATAAAACATCATCGTGAGATTCCTCCAAATATCTTGTCCGCCCCTAACAAACATATAGGGCATCTGTTAGATTTCTTAGGCTTTTACTATCCCCCGGTCACTAAAGACATTAATCAAGGCAATAATAGATCGTTATTTCTTCCTCCATCTACGACTGAGCTGTATGAAGCTGGAGTCATCTTGGAGAAAGCAGTAACAACGAGTGATTACAACATTATGGGCATAAGTTTTGAAGGTGGGGTTCTTAAAATCCCACCATTTGAAATTCATGATCTCTTTGAAATCACTATGAGGAATTTGTTGGCGTTTGAGAATTTTCAAGGTGGAAGTGGGAGTGAAAGCTCTGCAATTCATTATATTTGGTTTTTAGGGGCTTTAATAAGTAAAGAGAAAGATTCAAGTTTACTTATGAAGAAGGGAATCTTAAGTAATCTTATTGGAGGAAGTGATGTAGAAGTTTCCAATATGTTCAATAATATTGGTAAAGGTGTGACATTTCGAGGACATTTTTACTATGATAGTACAAGCAGAAATTTACGTAAACACTGCGACGCAAGAAGTAACCGATGGATGGCTATATTGAAGCGTGATTATTTAAATACGCCATGGGCTATTGTTTCTTTAGTTTGTGTCACCATTGTCACTCTAATCACTTTGTTGAAAACCATAGTGTTCATGTATCATTTTATATAA

Protein sequence

MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNKHIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRDYLNTPWAIVSLVCVTIVTLITLLKTIVFMYHFI
Homology
BLAST of Cmc04g0111941 vs. NCBI nr
Match: XP_008443397.1 (PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 548.5 bits (1412), Expect = 3.2e-152
Identity = 271/273 (99.27%), Postives = 272/273 (99.63%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK
Sbjct: 172 MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 231

Query: 61  HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMGISF 120
           HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMG SF
Sbjct: 232 HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMG-SF 291

Query: 121 EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM 180
           EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM
Sbjct: 292 EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM 351

Query: 181 KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD 240
           KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD
Sbjct: 352 KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD 411

Query: 241 YLNTPWAIVSLVCVTIVTLITLLKTIVFMYHFI 274
           YLNTPWAIVSLVCVTIVTLITLLKTIVFMYHF+
Sbjct: 412 YLNTPWAIVSLVCVTIVTLITLLKTIVFMYHFV 443

BLAST of Cmc04g0111941 vs. NCBI nr
Match: KAE8651212.1 (hypothetical protein Csa_001883 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.7e-116
Identity = 220/273 (80.59%), Postives = 236/273 (86.45%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           +LENQLPFFV+QGL  FI +PNN DD F VLVNIVHNFFQ NF+KH+ +IP NI S   K
Sbjct: 131 LLENQLPFFVLQGLLYFIDEPNN-DDSFTVLVNIVHNFFQANFMKHYCKIPQNIFSPTRK 190

Query: 61  HIGHLLDFLGFYYPPVTKD-INQGNNRSLFLPPSTTELYEAGVILEKAVTTSD-YNIMGI 120
           +I HL+DFLGFYY P T D INQGN+R LFLPPSTTELYEAGVILEKA+TT+D YNIMGI
Sbjct: 191 NIRHLVDFLGFYYSPTTTDIINQGNDRLLFLPPSTTELYEAGVILEKAITTNDHYNIMGI 250

Query: 121 SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSL 180
           SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGS SESSAIHYI FLGALISKEKDSSL
Sbjct: 251 SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSASESSAIHYILFLGALISKEKDSSL 310

Query: 181 LMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILK 240
           LMKKGILSNLIGGSD EVSNMFNNIGKGV FRGHF YDSTSRNLRKHCDA+SN+WMAILK
Sbjct: 311 LMKKGILSNLIGGSDEEVSNMFNNIGKGVRFRGHFCYDSTSRNLRKHCDAKSNQWMAILK 370

Query: 241 RDYLNTPWAIVSLVCVTIVTLITLLKTIVFMYH 272
           RDY NTPW I S +   I  LITLL+T   +YH
Sbjct: 371 RDYFNTPWTITSFIFAVIFALITLLQTTFTIYH 402

BLAST of Cmc04g0111941 vs. NCBI nr
Match: XP_004147504.1 (UPF0481 protein At3g47200 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.7e-116
Identity = 220/273 (80.59%), Postives = 236/273 (86.45%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           +LENQLPFFV+QGL  FI +PNN DD F VLVNIVHNFFQ NF+KH+ +IP NI S   K
Sbjct: 53  LLENQLPFFVLQGLLYFIDEPNN-DDSFTVLVNIVHNFFQANFMKHYCKIPQNIFSPTRK 112

Query: 61  HIGHLLDFLGFYYPPVTKD-INQGNNRSLFLPPSTTELYEAGVILEKAVTTSD-YNIMGI 120
           +I HL+DFLGFYY P T D INQGN+R LFLPPSTTELYEAGVILEKA+TT+D YNIMGI
Sbjct: 113 NIRHLVDFLGFYYSPTTTDIINQGNDRLLFLPPSTTELYEAGVILEKAITTNDHYNIMGI 172

Query: 121 SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSL 180
           SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGS SESSAIHYI FLGALISKEKDSSL
Sbjct: 173 SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSASESSAIHYILFLGALISKEKDSSL 232

Query: 181 LMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILK 240
           LMKKGILSNLIGGSD EVSNMFNNIGKGV FRGHF YDSTSRNLRKHCDA+SN+WMAILK
Sbjct: 233 LMKKGILSNLIGGSDEEVSNMFNNIGKGVRFRGHFCYDSTSRNLRKHCDAKSNQWMAILK 292

Query: 241 RDYLNTPWAIVSLVCVTIVTLITLLKTIVFMYH 272
           RDY NTPW I S +   I  LITLL+T   +YH
Sbjct: 293 RDYFNTPWTITSFIFAVIFALITLLQTTFTIYH 324

BLAST of Cmc04g0111941 vs. NCBI nr
Match: XP_038904513.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 318.9 bits (816), Expect = 4.2e-83
Identity = 168/267 (62.92%), Postives = 200/267 (74.91%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           MLENQLPFFV+Q LF  I +     D    LV+I+H FF  NF+KH+ E P N    P +
Sbjct: 182 MLENQLPFFVLQDLFDLIIRGT---DNSFTLVDILHKFFGDNFMKHNCETPQN--KPPKE 241

Query: 61  HIGHLLDFLGFYYPPVTKDINQ-GNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMGIS 120
           +I HL+ FL FYY P   DI +  NN+SL LPPS TEL+EAGVILEK  T    NI+ ++
Sbjct: 242 NIRHLVYFLCFYYSPTNGDIIECNNNKSLLLPPSITELHEAGVILEKGSTD---NILNVT 301

Query: 121 FEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLL 180
           F+ GVLKIPPFEIH LFEI MRNL+AFENFQG +G++S AIHY+ FLGALIS+EKDSSLL
Sbjct: 302 FKDGVLKIPPFEIHGLFEIYMRNLMAFENFQGVNGNQSYAIHYVLFLGALISREKDSSLL 361

Query: 181 MKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKR 240
           MKKGI++NLIGGSD EVSNMFNNIGKGVTF+GHFYY+  S++L KHC  R NRWMA L+R
Sbjct: 362 MKKGIITNLIGGSDEEVSNMFNNIGKGVTFQGHFYYEDVSKDLHKHCKTRRNRWMASLRR 421

Query: 241 DYLNTPWAIVSLVCVTIVTLITLLKTI 267
           DY NTPWA +SL+    VT    L+TI
Sbjct: 422 DYCNTPWATISLLAAIFVTFFIFLQTI 440

BLAST of Cmc04g0111941 vs. NCBI nr
Match: XP_022131633.1 (UPF0481 protein At3g47200-like [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 3.0e-49
Identity = 126/272 (46.32%), Postives = 168/272 (61.76%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           MLENQLPFFV+Q LF  +      DD  +  V +  NF     I  + E+P ++ S    
Sbjct: 1   MLENQLPFFVLQALFDLLPPHTMKDD--ISFVQLTGNFLSKGLIGGY-ELPDDVSS--TG 60

Query: 61  HIGHLLDFLGFYYPPV--TKDINQGN---NRSLFLPPSTTELYEAGVILEKAVTTSDYNI 120
            + HL+D L FYY P   T++ +Q +   NR   LPP+ T+L EAGV ++K +     ++
Sbjct: 61  EVKHLVDLLSFYYVPSADTEEDSQNSEIENREFLLPPTITQLSEAGVKVKKEIGAK--SL 120

Query: 121 MGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQ-GGSGSESSAIHYIWFLGALISKEK 180
           M ISF+ GVL+IPPFEIHD FEI +RNL+AFE ++  GS  E    HYI FL  LIS EK
Sbjct: 121 MDISFKNGVLQIPPFEIHDDFEIYVRNLMAFEQYRVQGSAGERYVAHYIEFLDGLISTEK 180

Query: 181 DSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWM 240
           D +LL+K+ I+ N IGGSD EVS +FNN+ K       FYY  TS+NL  HC    +R  
Sbjct: 181 DVALLVKEEIIINHIGGSDKEVSELFNNLCKYTHIPDDFYYYGTSKNLHDHCKKWWHRSK 240

Query: 241 AILKRDYLNTPWAIVSLVCVTIVTLITLLKTI 267
           A L+RDY N+PWA +S+V  T + L+ LL+TI
Sbjct: 241 ATLRRDYFNSPWASISVVAATFLILLALLQTI 265

BLAST of Cmc04g0111941 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08
Identity = 71/300 (23.67%), Postives = 127/300 (42.33%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFF------QVNFIKHHREIPPNI 60
           +LENQ+PFFV+Q L+       + D     L  I  +FF      + ++ + HR      
Sbjct: 178 LLENQVPFFVLQTLYVGSKIGVSSD-----LNRIAFHFFKNPIDKEGSYWEKHR------ 237

Query: 61  LSAPNKHIGHLLDFLGFYYPPVTKD------------INQG--------NNRSLFLPPST 120
               N    HLLD +   + P T +            +++G        +++++ L  S 
Sbjct: 238 ----NYKAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGKSGNVPSVDSKAVPLILSA 297

Query: 121 TELYEAGVILEKAVTTSDYNIMGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSG 180
             L   G+      +  D +I+ +  +   L+IP             N +AFE F   S 
Sbjct: 298 KRLRLQGIKFRLRRSKED-SILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFEQFYTDSS 357

Query: 181 SESSAIHYIWFLGALISKEKDSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFR-GHF 240
           +E +   YI F+G L++ E+D + L    ++     GS+ EVS  F  I K V F     
Sbjct: 358 NEITT--YIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFEVDTS 417

Query: 241 YYDSTSRNLRKHCDARSNRWMAILKRDYLNTPWAIVSLVCVTIVTLITLLKTIVFMYHFI 274
           Y ++  + + ++     N   A  +  +  +PW  +S   V  V L+T+L++ V +  ++
Sbjct: 418 YLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTMLQSTVAILSYL 459

BLAST of Cmc04g0111941 vs. ExPASy TrEMBL
Match: A0A1S3B8P8 (LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103486991 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.6e-152
Identity = 271/273 (99.27%), Postives = 272/273 (99.63%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK
Sbjct: 172 MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 231

Query: 61  HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMGISF 120
           HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMG SF
Sbjct: 232 HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMG-SF 291

Query: 121 EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM 180
           EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM
Sbjct: 292 EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM 351

Query: 181 KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD 240
           KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD
Sbjct: 352 KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD 411

Query: 241 YLNTPWAIVSLVCVTIVTLITLLKTIVFMYHFI 274
           YLNTPWAIVSLVCVTIVTLITLLKTIVFMYHF+
Sbjct: 412 YLNTPWAIVSLVCVTIVTLITLLKTIVFMYHFV 443

BLAST of Cmc04g0111941 vs. ExPASy TrEMBL
Match: A0A0A0LC32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825000 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.8e-116
Identity = 220/273 (80.59%), Postives = 236/273 (86.45%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           +LENQLPFFV+QGL  FI +PNN DD F VLVNIVHNFFQ NF+KH+ +IP NI S   K
Sbjct: 157 LLENQLPFFVLQGLLYFIDEPNN-DDSFTVLVNIVHNFFQANFMKHYCKIPQNIFSPTRK 216

Query: 61  HIGHLLDFLGFYYPPVTKD-INQGNNRSLFLPPSTTELYEAGVILEKAVTTSD-YNIMGI 120
           +I HL+DFLGFYY P T D INQGN+R LFLPPSTTELYEAGVILEKA+TT+D YNIMGI
Sbjct: 217 NIRHLVDFLGFYYSPTTTDIINQGNDRLLFLPPSTTELYEAGVILEKAITTNDHYNIMGI 276

Query: 121 SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSL 180
           SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGS SESSAIHYI FLGALISKEKDSSL
Sbjct: 277 SFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSASESSAIHYILFLGALISKEKDSSL 336

Query: 181 LMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILK 240
           LMKKGILSNLIGGSD EVSNMFNNIGKGV FRGHF YDSTSRNLRKHCDA+SN+WMAILK
Sbjct: 337 LMKKGILSNLIGGSDEEVSNMFNNIGKGVRFRGHFCYDSTSRNLRKHCDAKSNQWMAILK 396

Query: 241 RDYLNTPWAIVSLVCVTIVTLITLLKTIVFMYH 272
           RDY NTPW I S +   I  LITLL+T   +YH
Sbjct: 397 RDYFNTPWTITSFIFAVIFALITLLQTTFTIYH 428

BLAST of Cmc04g0111941 vs. ExPASy TrEMBL
Match: A0A6J1BTY9 (UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111004763 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49
Identity = 126/272 (46.32%), Postives = 168/272 (61.76%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           MLENQLPFFV+Q LF  +      DD  +  V +  NF     I  + E+P ++ S    
Sbjct: 1   MLENQLPFFVLQALFDLLPPHTMKDD--ISFVQLTGNFLSKGLIGGY-ELPDDVSS--TG 60

Query: 61  HIGHLLDFLGFYYPPV--TKDINQGN---NRSLFLPPSTTELYEAGVILEKAVTTSDYNI 120
            + HL+D L FYY P   T++ +Q +   NR   LPP+ T+L EAGV ++K +     ++
Sbjct: 61  EVKHLVDLLSFYYVPSADTEEDSQNSEIENREFLLPPTITQLSEAGVKVKKEIGAK--SL 120

Query: 121 MGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQ-GGSGSESSAIHYIWFLGALISKEK 180
           M ISF+ GVL+IPPFEIHD FEI +RNL+AFE ++  GS  E    HYI FL  LIS EK
Sbjct: 121 MDISFKNGVLQIPPFEIHDDFEIYVRNLMAFEQYRVQGSAGERYVAHYIEFLDGLISTEK 180

Query: 181 DSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWM 240
           D +LL+K+ I+ N IGGSD EVS +FNN+ K       FYY  TS+NL  HC    +R  
Sbjct: 181 DVALLVKEEIIINHIGGSDKEVSELFNNLCKYTHIPDDFYYYGTSKNLHDHCKKWWHRSK 240

Query: 241 AILKRDYLNTPWAIVSLVCVTIVTLITLLKTI 267
           A L+RDY N+PWA +S+V  T + L+ LL+TI
Sbjct: 241 ATLRRDYFNSPWASISVVAATFLILLALLQTI 265

BLAST of Cmc04g0111941 vs. ExPASy TrEMBL
Match: A0A6J1BQ17 (UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111004760 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 6.3e-45
Identity = 123/276 (44.57%), Postives = 167/276 (60.51%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHH---REIPPNILSA 60
           +LENQLPFF++  LF         + C   +  +V   F  NF + +   RE+ P+ L A
Sbjct: 159 LLENQLPFFILVSLF---------EKCTNSIPFVV---FARNFCRWYMGARELIPDGLLA 218

Query: 61  PNKHIGHLLDFLGFYY--PPVTK--DINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDY 120
             +   HL+DFL FYY  P  T+  D ++  N+ L  PP+ TEL+EAGV  +KA    D 
Sbjct: 219 --RKPNHLVDFLSFYYALPIATENNDHHKNENKKLVNPPTATELWEAGVRFQKA--AEDK 278

Query: 121 NIMGISF--EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALIS 180
            IM I F  E GVL IP  EIHD FE  MRNLLA+E++  G   E   I YI FL  LIS
Sbjct: 279 LIMDIHFQEEEGVLAIPHLEIHDAFETYMRNLLAYEHYHVGD-DERCIIQYILFLDDLIS 338

Query: 181 KEKDSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVT-FRGHFYYDSTSRNLRKHCDARS 240
            E+D SLL+K GI++N IGG+D EVS MFNN+ K V+ +   +YY+  S  LRK+C+   
Sbjct: 339 TERDVSLLVKAGIITNGIGGNDEEVSKMFNNLCKDVSVYCDFYYYNQISMTLRKYCETPW 398

Query: 241 NRWMAILKRDYLNTPWAIVSLVCVTIVTLITLLKTI 267
           +RW A LKRDY N+PW  +S +  T+  L+T+++T+
Sbjct: 399 HRWRASLKRDYFNSPWTSISFLAATVAILLTVVQTV 417

BLAST of Cmc04g0111941 vs. ExPASy TrEMBL
Match: A0A6J1BVD4 (UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111005065 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 116/272 (42.65%), Postives = 164/272 (60.29%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           MLENQLPFFV+Q LF     P + +   +  + +   F     I+ +  +P  + S   +
Sbjct: 201 MLENQLPFFVLQALFDLF--PPHKNKANISFIQLTGKFLSNGLIRGY-NLPCGVSS--TE 260

Query: 61  HIGHLLDFLGFYY--PPVTKDINQG---NNRSLFLPPSTTELYEAGVILEKAVTTSDYNI 120
            + HL+D LGFYY   P T++  Q     NR   LPP+ T+L EAGV ++KA+     ++
Sbjct: 261 EVNHLVDLLGFYYVPSPDTEEYRQNKEIKNRIFLLPPTITKLCEAGVKVKKAIGAR--SL 320

Query: 121 MGISFEGGVLKIPPFEIHDLFEITMRNLLAFENF-QGGSGSESSAIHYIWFLGALISKEK 180
           + ISF+ GVL+IPPFEIHD FEI +RNL+AFE +       +   IHYI FL  LIS  +
Sbjct: 321 LDISFKRGVLQIPPFEIHDDFEIYVRNLMAFEQYCVREPDDDRYVIHYIEFLDGLISTAE 380

Query: 181 DSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWM 240
           D +LL+K+GI+ N IGGS+ EVS +FNN+ K       FY+ +TS+NL  HC     R  
Sbjct: 381 DVALLVKEGIIINHIGGSNKEVSELFNNLCKNTPIPFQFYFYATSKNLHDHCRKWWPRSK 440

Query: 241 AILKRDYLNTPWAIVSLVCVTIVTLITLLKTI 267
           A L+RDY ++PWA +S+   T + L+ LL+TI
Sbjct: 441 ATLRRDYFHSPWAYISVFAATFLILLALLQTI 465

BLAST of Cmc04g0111941 vs. TAIR 10
Match: AT5G11290.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-33
Identity = 90/266 (33.83%), Postives = 142/266 (53.38%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           +LENQLP+FV++G+F  ++   +Y      L  I+HN F+    K    IP    S  + 
Sbjct: 95  LLENQLPYFVVEGMFGLLHV--DYHRELPPLTRIIHNHFK----KFWMSIPSFSRSISDS 154

Query: 61  HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMGISF 120
            I H +D L   + P+      G+ R +    S  E+  AGV L+ A   ++   + ISF
Sbjct: 155 KICHFVDLLRSIHLPLVLSFPGGSMRMMDSVLSAKEIQNAGVKLQPA--DNNTCALDISF 214

Query: 121 EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM 180
             GVL IP  +I+D+ E   RN++ FE        ++  IHY+ FL   I    D+ L +
Sbjct: 215 ANGVLTIPKIKINDITESLYRNIILFEQCH---RLDAYFIHYMRFLSCFIRSPMDAELFI 274

Query: 181 KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD 240
             GI+ N  G ++ +VS +FN+I K  ++ G FYY +   NL+ HC+A  N+W A L+RD
Sbjct: 275 DHGIIVNRFGNAE-DVSRLFNSILKETSYSG-FYYKTVYGNLQAHCNAPWNKWKATLRRD 334

Query: 241 YLNTPWAIVSLVCVTIVTLITLLKTI 267
           Y + PW+  S+V   ++ L+T ++ I
Sbjct: 335 YFHNPWSAASVVAACVLLLLTFVQAI 347

BLAST of Cmc04g0111941 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-32
Identity = 88/266 (33.08%), Postives = 138/266 (51.88%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNFIKHHREIPPNILSAPNK 60
           ++ENQLPFFV++ +F  +   N Y      ++ +    F     +   E     ++ P  
Sbjct: 424 LIENQLPFFVVKEIFLLLL--NYYQQGTPSIIQLAQRHFSYFLSRIDDE---KFITEPE- 483

Query: 61  HIGHLLDFLGFYYPPVTKDINQGNNRSLFLPPSTTELYEAGVILEKAVTTSDYNIMGISF 120
              H +D L   Y P      +     +   P  TEL+ AGV  + A T+S   ++ ISF
Sbjct: 484 ---HFVDLLRSCYLPQFPIKLEYTTVKVDNAPEATELHTAGVRFKPAETSS--CLLDISF 543

Query: 121 EGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEKDSSLLM 180
             GVLKIP   + DL E   +N++ FE  +    S  + + YI  LG  I    D+ LL+
Sbjct: 544 ADGVLKIPTIVVDDLTESLYKNIIGFEQCR---CSNKNFLDYIMLLGCFIKSPTDADLLI 603

Query: 181 KKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWMAILKRD 240
             GI+ N +G S V+VSN+FN+I K V +   FY+   S NL+ +C+   NRW AIL+RD
Sbjct: 604 HSGIIVNYLGNS-VDVSNLFNSISKEVIYDRRFYFSMLSENLQAYCNTPWNRWKAILRRD 663

Query: 241 YLNTPWAIVSLVCVTIVTLITLLKTI 267
           Y + PWA+ S+    ++ L+T ++++
Sbjct: 664 YFHNPWAVASVFAALLLLLLTFIQSV 674

BLAST of Cmc04g0111941 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 82.0 bits (201), Expect = 8.0e-16
Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 0

Query: 95  TELYEAGVILEKAVTTSDYNIMGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSG 154
           TEL EAG+   +  T   ++   + F+ G L+IP   IHD  +    NL+AFE     S 
Sbjct: 354 TELKEAGIKFRRRKTDRFWD---MQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDSS 413

Query: 155 SESSAIHYIWFLGALISKEKDSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTF-RGHF 214
           ++ ++  YI F+  LI   +D S L   GI+ + + GSD EV+++FN + + V F     
Sbjct: 414 NDITS--YIIFMDNLIDSHEDVSYLHYCGIIEHWL-GSDSEVADLFNRLCQEVVFDTEDS 473

Query: 215 YYDSTSRNLRKHCDARSNRWMAILKRDYLNTPWAIVSLVCVTIVTLITLLKTIVFMYHF 273
           Y    S  + ++ D + N W A LK  Y N PWAIVS     I+ ++T  ++   +Y +
Sbjct: 474 YLSRLSIEVNRYYDHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVYAY 526

BLAST of Cmc04g0111941 vs. TAIR 10
Match: AT2G28580.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-15
Identity = 77/272 (28.31%), Postives = 127/272 (46.69%), Query Frame = 0

Query: 1   MLENQLPFFVIQGLFCFIYQPNNYDDCFMVLVNIVHNFFQVNF--IKHHREIPPNILSAP 60
           +LENQLP+ +++ LF          + F   VN    F  +     +   +I   +    
Sbjct: 259 LLENQLPYALLEKLF----------EPFSSNVNTKETFRDITLRAFRFEGKIKEEVRF-- 318

Query: 61  NKHIGHLLDFLGFYYPPVTKD-INQGNN---RSLFLPPSTTELYEAGVILEKAVTTSDYN 120
            +H   L   +      +T++ IN   N   +S  +  +  +L  AGV        +D +
Sbjct: 319 -QHFTDLFRCVRVSTLSLTEEQINIAKNEPPKSRKIMYNADKLDSAGVNFVNVDEENDLS 378

Query: 121 IMGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGGSGSESSAIHYIWFLGALISKEK 180
           ++ I+F+ G+LK+P F + D  E  +RNL+A E  Q      +    YI FL  LI+ ++
Sbjct: 379 LV-ITFKDGILKMPCFTVEDNTERVVRNLMALE--QCHYPRTTFVCDYISFLDFLINTDQ 438

Query: 181 DSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGHFYYDSTSRNLRKHCDARSNRWM 240
           D  LL KKGI+ N +G     V+ M N +  G+   G  Y D    NL KH D R NR +
Sbjct: 439 DVDLLAKKGIVKNWLGHQG-SVTEMVNKLCLGLVDFGSHYSDIV-ENLNKHYDNRLNRSV 498

Query: 241 AILKRDYLNTPWAIVSLVCVTIVTLITLLKTI 267
             L+R Y    W   + +   ++ ++TL++T+
Sbjct: 499 GTLRRVYFKDLWTGTATIAAVVLLVLTLIQTV 512

BLAST of Cmc04g0111941 vs. TAIR 10
Match: AT3G60470.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14
Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 0

Query: 93  STTELYEAGVILEKAVTTSDYNIMGISFEGGVLKIPPFEIHDLFEITMRNLLAFENFQGG 152
           +  +L  AGV   KAVT  D   + ++FE G LKIP   + D  EIT+RN++A E  Q  
Sbjct: 364 NAAKLQSAGVKF-KAVT--DEFSIDVTFENGCLKIPCLWVPDDAEITLRNIMALE--QCH 423

Query: 153 SGSESSAIHYIWFLGALISKEKDSSLLMKKGILSNLIGGSDVEVSNMFNNIGKGVTFRGH 212
              ++   +++ FL  LI  +KD  LLM+ GIL+N    S V V+ M N +  GV     
Sbjct: 424 YPFKAYVCNFVSFLDFLIDTDKDVDLLMENGILNNWGEKSSVAVAEMVNTLFSGVV-ESR 483

Query: 213 FYYDSTSRNLRKHCDARSNRWMAILKRDYLNTPWAIVSLVCVTIVTLITLLKTI 267
            YY   +  +  + +   NR   IL R Y    W   + V   ++ ++TL++T+
Sbjct: 484 SYYAGIASRVNAYYENPVNRSRTILGRQYFGNLWRGTATVAAALLLVMTLIQTV 531

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008443397.13.2e-15299.27PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo][more]
KAE8651212.13.7e-11680.59hypothetical protein Csa_001883 [Cucumis sativus][more]
XP_004147504.13.7e-11680.59UPF0481 protein At3g47200 [Cucumis sativus][more]
XP_038904513.14.2e-8362.92UPF0481 protein At3g47200-like [Benincasa hispida][more]
XP_022131633.13.0e-4946.32UPF0481 protein At3g47200-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q9SD532.7e-0823.67UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3B8P81.6e-15299.27LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=L... [more]
A0A0A0LC321.8e-11680.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825000 PE=4 SV=1[more]
A0A6J1BTY91.5e-4946.32UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111004763 PE... [more]
A0A6J1BQ176.3e-4544.57UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111004760 PE... [more]
A0A6J1BVD41.8e-4442.65UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111005065 PE... [more]
Match NameE-valueIdentityDescription
AT5G11290.15.5e-3333.83Plant protein of unknown function (DUF247) [more]
AT4G31980.13.6e-3233.08unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,... [more]
AT3G50120.18.0e-1632.96Plant protein of unknown function (DUF247) [more]
AT2G28580.14.0e-1528.31Plant protein of unknown function (DUF247) [more]
AT3G60470.17.5e-1433.33Plant protein of unknown function (DUF247) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 1..258
e-value: 1.0E-56
score: 192.9
NoneNo IPR availablePANTHERPTHR31170:SF13BNAC04G53230D PROTEINcoord: 1..267
NoneNo IPR availablePANTHERPTHR31170BNAC04G53230D PROTEINcoord: 1..267

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0111941.1Cmc04g0111941.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane