Cmc04g0110461 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0110461
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 29739144 .. 29741644 (+)
RNA-Seq ExpressionCmc04g0110461
SyntenyCmc04g0110461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTTCTTCATGCTACGACGTCCCATATGAACTTCTCTCGCTGCCGTCGTCGGTTTGGTTTCAGTTGGATTAACCGATTTTGATCGCACCAATGTCGTAATTTTGATCCCGTTGTATGTTTTCAATGATAATGGCTTTTATATCCGATCTTATGCTCTTCCATTTTCATCTCTTGGTCAGAAAAAGCCCTAAAACTCGTCGCCATCCTCTTCTTATCCGGTTGCTCCACTGACTCCTCCGTCGTTCCTACTCCTACTCGCCGCCCAGAAAAAGTGCCGACGTCCTCCGATATTGGTAATTTCCAAAGTTGCATTTATGTCCCTCTCTTTTTTACTTTCTTGACTGTTCCTCAACCCGATACCTCTCTCTTCCCTCTTCACTGGTTACTCCTGCGAACGTCAGCCGCCGTTTCCGCCATCATTTTGTGCCCTAAGAAGTTGCCAACATCCTTTTGCTTTGATTTCTTTATTTCAGTTTTGGTCAAATCCTCCGTATTCATAAAAATCAGTTTTGAAATCTTATTTTTCGTTACTTTGAAGAATCAAAACTGATCTAGACTTCAAGATCAGGTCCGATTATCCCCATTACATGTTGTCGAAAAGGAAAATGAAAATTAGTCTTGTTTTTTTCCTGTACCATTTATTTAAACTGCAAAATTGAATTTTTTTGTCCAAACCATGTGAAGTAGTCAGAGGAGAAAGAAAGAAACATGAAAAGTTTGAAGGTTGGTTAAGCTCTCCAACAGTAGGAAGTGTATAATACTTTTCAATCAAGATTTTAATGACAAAGAGCAAATTTGAATTGAAACTTACTACGATATGAACGGCTAGTTTTAGGGGAGTTTGGTTTGTCCCCTCTCTTGTTTCTTTTGATAAATCAAAAATCAATCGATGGTGAAACTAACATCAGCTGATATTTAATAATTAACCGAAATGGAAAGTTTTGTTCATTTTGAACTTTCAATCGAACTCTTCTCTCGTTAGCCTTAGAATTAGAGACAATGCACATTATCTACCTTTCATTTCCTACTCTCTTCTAAGATTTAGATCCACTTTAATAAGTTCTTTCGAACTCTTGTAGGGAAAATCATGAATACTCCATGTGCAGAGACGAGGTTGAGGTTGCGAATGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAGACAATAGGAAGCAAGAAGGTAATGTTGATATTAATGATCCTTATGATGTTGAATGTGAATATTGTGGTGCTTTATATGCCAATCATTCAAAGAGAAATTGAATGGAAAATATGGAAGCATATCCCGAGAACTATCCTACTGATCGTCTTTGTTGCGGTGGGGCAGAAGATGGATATAAAGAGAATCTGATATTAGAAAGTGAAGAGGAGGACGAGGAGGGTGTAGGTGAGAACTGATCAAAGTCATTTGATTCAACACTCACTGGTAGAGTTTTTTATGCAGAAGTTGCAAGCTAAGAATACCAAAGGAAAAAATGACCATTATTGATAAACTGCCTCTCAACTTTGTGAAATATATATACTGAAAATATATCAAAGTGAAGAAACGATCTCTAAAGAAGATTTTTGTAGAACAAGATCCTAGAGTTTCTCTCGCAATTCATACTTAGACGTTGGATCAAGATATGATAGTTCTTACGGGACATTTCATTGATGTCAATTGGAAAATGCAGAAGTAGCTAAGGGTTCTCAATTTTTGTTCAATCAAGAATTTTGATGGAGAGACTAATGGAAAAGGAGTAGGATGTTTGAACAAATGGTGTATGGAAAAGGAGTTGGTTTTGGACAGTAAATTTGTGCACGTTAAATGTTGTGCCCATATTTTGAATTTGATTGTATGTGATATTATGAAAGATTTTCCTGAATTGATTTCTAAGATTTGAAACATTGTTTGGTACGTGAGATCGATCTACTCTTGAACGATTTAGTTGCTTTGAGAAATGTATTGAAGAGAAAAACTTGTCTATAGCAATAATGTTTTCAAATCTAGTAGAGGCTCATGCATACTTGCACAATTGGGCTAAGCAAGGATACTGCACGATCGAGTTGATATTCGATAACATATAGAGGATGCTATTCGCATGGAGGAACTAGGAAGGTATGATAATTTTAATATATGCTCTCATGGGACCTGGTAATGTGTTTATTGTGATCTGATGTTATTTGAATGATCTTTTCTTATTTTTTTAGATTTTCAAACAAACTTAAAAGCAACATCAACCAAGGAGGTGGGGGACAATGCGTGGTGAAAATAAGGGTCATTAGGATGCTTTAAATTTGAACTCTTTAGGGTTGCTTTTTCCTGTTGAATTTCTTGGTATTGTATTGTCAAAATGATCTAGAAAAGAAAAAACTCATTATATTGGTTACTGAATTCAGCCCTTTTAGGATATGTATCTTGTGAATGATCAAACCTTGCTGCAATGTTTAACATTTTAACATTGGTGGAAAAACATAGGGACATGCAAAGATAGACATATAGACCTAACTTTTG

mRNA sequence

GGCTTCTTCATGCTACGACGTCCCATATGAACTTCTCTCGCTGCCGTCGTCGGTTTGGTTTCAGTTGGATTAACCGATTTTGATCGCACCAATGTCGTAATTTTGATCCCGTTGTATGTTTTCAATGATAATGGCTTTTATATCCGATCTTATGCTCTTCCATTTTCATCTCTTGGTCAGAAAAAGCCCTAAAACTCGTCGCCATCCTCTTCTTATCCGGTTGCTCCACTGACTCCTCCGTCGTTCCTACTCCTACTCGCCGCCCAGAAAAAGTGCCGACGTCCTCCGATATTGGGAAAATCATGAATACTCCATGTGCAGAGACGAGGTTGAGGTTGCGAATGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAGACAATAGGAAGCAAGAAGAGGCTCATGCATACTTGCACAATTGGGCTAAGCAAGGATACTGCACGATCGAGTTGATATTCGATAACATATAGAGGATGCTATTCGCATGGAGGAACTAGGAAGATTTTCAAACAAACTTAAAAGCAACATCAACCAAGGAGGTGGGGGACAATGCGTGGTGAAAATAAGGGTCATTAGGATGCTTTAAATTTGAACTCTTTAGGGTTGCTTTTTCCTGTTGAATTTCTTGGTATTGTATTGTCAAAATGATCTAGAAAAGAAAAAACTCATTATATTGGTTACTGAATTCAGCCCTTTTAGGATATGTATCTTGTGAATGATCAAACCTTGCTGCAATGTTTAACATTTTAACATTGGTGGAAAAACATAGGGACATGCAAAGATAGACATATAGACCTAACTTTTG

Coding sequence (CDS)

ATGTGCAGAGACGAGGTTGAGGTTGCGAATGAGGATGAAAATGTAGATTATGCTACTACGAGAGATCAAGACAATAGGAAGCAAGAAGAGGCTCATGCATACTTGCACAATTGGGCTAAGCAAGGATACTGCACGATCGAGTTGATATTCGATAACATATAG

Protein sequence

MCRDEVEVANEDENVDYATTRDQDNRKQEEAHAYLHNWAKQGYCTIELIFDNI
Homology
[Close]
BLAST of Cmc04g0110461 vs. NCBI nr
Match: KAA0053643.1 (hypothetical protein E6C27_scaffold135G00140 [Cucumis melo var. makuwa] >TYK00814.1 hypothetical protein E5676_scaffold1545G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 8.0e-07
Identity = 34/49 (69.39%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 1  MCRDEVEVANEDENVDYATTRDQDNRKQEE-----AHAYLHNWAKQGYC 45
          MCRDEVEVANEDENVDYATTRDQDNRKQEE       AY  N+     C
Sbjct: 1  MCRDEVEVANEDENVDYATTRDQDNRKQEEKLNGNMEAYPENYPTDRLC 49

[Close]
BLAST of Cmc04g0110461 vs. ExPASy TrEMBL
Match: A0A5A7UCL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00150 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-07
Identity = 34/49 (69.39%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 1  MCRDEVEVANEDENVDYATTRDQDNRKQEE-----AHAYLHNWAKQGYC 45
          MCRDEVEVANEDENVDYATTRDQDNRKQEE       AY  N+     C
Sbjct: 1  MCRDEVEVANEDENVDYATTRDQDNRKQEEKLNGNMEAYPENYPTDRLC 49

The following BLAST results are available for this feature:
BLAST of Cmc04g0110461 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053643.18.0e-0769.39hypothetical protein E6C27_scaffold135G00140 [Cucumis melo var. makuwa] >TYK0081... [more]
BLAST of Cmc04g0110461 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0110461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UCL33.9e-0769.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc04g0110461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0110461.1Cmc04g0110461.1mRNA