Cmc04g0108081 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0108081
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr04: 26954999 .. 26955457 (+)
RNA-Seq Expression	Cmc04g0108081
Synteny	Cmc04g0108081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGATGTTGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAACTTACTTATCCCATACTCGTTCTGATATTTTCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATATACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTATTGACAAAAAGTCTACGTTCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTAAATACAGAGCTATAAGTCTTGAGAATATGTGA

mRNA sequence

ATGTTGGGATGTTGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAACTTACTTATCCCATACTCGTTCTGATATTTTCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATATACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTATTGACAAAAAGTCTACGTTCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTAAATACAGAGCTATAAGTCTTGAGAATATGTGA

Coding sequence (CDS)

ATGTTGGGATGTTGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAACTTACTTATCCCATACTCGTTCTGATATTTTCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATATACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTATTGACAAAAAGTCTACGTTCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTAAATACAGAGCTATAAGTCTTGAGAATATGTGA

Protein sequence

MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISLENM

Homology

[Close]

BLAST of Cmc04g0108081 vs. NCBI nr
Match: TYK15048.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQ
Sbjct: 184 MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGTLTYLSHTRPDIFIAVSVVSQFMQ 243

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
           APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK IEAYTDSDWARSVID+KSTFGYCTFV
Sbjct: 244 APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKIIEAYTDSDWARSVIDRKSTFGYCTFV 303

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
           WGNLVTWRSKKQSVVARSSAEA+YRAISL
Sbjct: 304 WGNLVTWRSKKQSVVARSSAEAEYRAISL 332

[Close]

BLAST of Cmc04g0108081 vs. NCBI nr
Match: KAA0054216.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 4.7e-76
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQ
Sbjct: 617 MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGTLTYLSHTRPDIFIAVSVVSQFMQ 676

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
           APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK I+AYTDSDWARSVID+KSTFGYCTFV
Sbjct: 677 APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKIIKAYTDSDWARSVIDRKSTFGYCTFV 736

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
           WGNLVTWRSKKQSVVARSSAEA+YRAISL
Sbjct: 737 WGNLVTWRSKKQSVVARSSAEAEYRAISL 765

[Close]

BLAST of Cmc04g0108081 vs. NCBI nr
Match: TYK03082.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 2.2e-73
Identity = 139/149 (93.29%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            APYEKHMEAVNRILRYLKN PG+GLMFRKTNRKTIEAYTDSDWA SVID+KSTFGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGQGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTFGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
            WGNLVTWRSKKQSVVARSSAEA+YRA+SL
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSL 1501

[Close]

BLAST of Cmc04g0108081 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 6.3e-73
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            APYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTDSDWA SVID+KST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
            WGNLVTWRSKKQSVVARSSAEA+YRA+SL
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSL 1501

[Close]

BLAST of Cmc04g0108081 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 6.3e-73
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQ
Sbjct: 1327 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1386

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            APYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTDSDWA SVID+KST GYCTFV
Sbjct: 1387 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1446

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
            WGNLVTWRSKKQSVVARSSAEA+YRA+SL
Sbjct: 1447 WGNLVTWRSKKQSVVARSSAEAEYRAMSL 1475

[Close]

BLAST of Cmc04g0108081 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-26
Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            M+   P  TP+  + KL         D  +Y+ +VG L YL+ TR DI +AV+ +SQFM 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
             P E+H++A+ RILRYL   P  G+  +K N  ++ AY+D+DWA    D  ST GY  ++
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAIS 149
              + ++W SKKQ  V RSS EA+YR+++
Sbjct: 1335 GHHPISWSSKKQKGVVRSSTEAEYRSVA 1362

[Close]

BLAST of Cmc04g0108081 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.1e-25
Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           ML C P  TP+        S  + P D   ++ +VG L YL+ TR DI +AV++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            P     + + R+LRY+K     GL   K ++  ++A+ DSDWA     ++ST G+CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
             N+++W +K+Q  V+RSS E +YRA++L
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALAL 218

[Close]

BLAST of Cmc04g0108081 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.7e-25
Identity = 60/149 (40.27%), Postives = 92/149 (61.74%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLG-NSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFM 60
            ML   P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TR D+ +AV+ +SQ+M
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYM 1257

Query: 61   QAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTF 120
              P + H  A+ R+LRYL   P  G+  +K N  ++ AY+D+DWA    D  ST GY  +
Sbjct: 1258 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1317

Query: 121  VWGNLVTWRSKKQSVVARSSAEAKYRAIS 149
            +  + ++W SKKQ  V RSS EA+YR+++
Sbjct: 1318 LGHHPISWSSKKQKGVVRSSTEAEYRSVA 1345

[Close]

BLAST of Cmc04g0108081 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.1e-18
Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 31  YQRLVGKLTYLS-HTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRK 90
           Y   VG + YL   TR D+  AV V+SQF   P   H +A+ R+LRYL++    GL F +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 91  TNRKTIEAYTDSDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS 149
                +  Y+D+DWA  V  ++ST GY   + G  V+WRSKKQ  VA SS E +Y A+S
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALS 124

[Close]

BLAST of Cmc04g0108081 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 0


Query: 6    PADTPIEFNCKLGNS------DDQVPVDKEQYQRLVGKLTY-LSHTRSDIFFAVSVVSQF 65
            P  TP+  + KL         +++  + K  Y   VG L Y +  TR DI  AV VVS+F
Sbjct: 1080 PVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRF 1139

Query: 66   MQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCT 125
            ++ P ++H EAV  ILRYL+   G  L F  ++   ++ YTD+D A  + ++KS+ GY  
Sbjct: 1140 LENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLF 1199

Query: 126  FVWGNLVTWRSKKQSVVARSSAEAKYRA 147
               G  ++W+SK Q  VA S+ EA+Y A
Sbjct: 1200 TFSGGAISWQSKLQKCVALSTTEAEYIA 1226

[Close]

BLAST of Cmc04g0108081 vs. ExPASy TrEMBL
Match: A0A5D3CUZ4 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00960 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 7.8e-77
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQ
Sbjct: 184 MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGTLTYLSHTRPDIFIAVSVVSQFMQ 243

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
           APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK IEAYTDSDWARSVID+KSTFGYCTFV
Sbjct: 244 APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKIIEAYTDSDWARSVIDRKSTFGYCTFV 303

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
           WGNLVTWRSKKQSVVARSSAEA+YRAISL
Sbjct: 304 WGNLVTWRSKKQSVVARSSAEAEYRAISL 332

[Close]

BLAST of Cmc04g0108081 vs. ExPASy TrEMBL
Match: A0A5A7UIW7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001550 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.3e-76
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQ
Sbjct: 617 MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGTLTYLSHTRPDIFIAVSVVSQFMQ 676

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
           APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK I+AYTDSDWARSVID+KSTFGYCTFV
Sbjct: 677 APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKIIKAYTDSDWARSVIDRKSTFGYCTFV 736

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
           WGNLVTWRSKKQSVVARSSAEA+YRAISL
Sbjct: 737 WGNLVTWRSKKQSVVARSSAEAEYRAISL 765

[Close]

BLAST of Cmc04g0108081 vs. ExPASy TrEMBL
Match: A0A5D3BW68 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001890 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 139/149 (93.29%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            APYEKHMEAVNRILRYLKN PG+GLMFRKTNRKTIEAYTDSDWA SVID+KSTFGYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGQGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTFGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
            WGNLVTWRSKKQSVVARSSAEA+YRA+SL
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSL 1501

[Close]

BLAST of Cmc04g0108081 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            APYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTDSDWA SVID+KST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
            WGNLVTWRSKKQSVVARSSAEA+YRA+SL
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSL 1501

[Close]

BLAST of Cmc04g0108081 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1    MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
            MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            APYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTDSDWA SVID+KST GYCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
            WGNLVTWRSKKQSVVARSSAEA+YRA+SL
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSL 1501

[Close]

BLAST of Cmc04g0108081 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 60/148 (40.54%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           +LGC P+  P++ +           VD + Y+RL+G+L YL  TR DI FAV+ +SQF +
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
           AP   H +AV +IL Y+K   G+GL +       ++ ++D+ +      ++ST GYC F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAIS 149
             +L++W+SKKQ VV++SSAEA+YRA+S
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALS 495

[Close]

BLAST of Cmc04g0108081 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-26
Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 0


Query: 1   MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQ 60
           ML C P  TP+        S  + P D   ++ +VG L YL+ TR DI +AV++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  APYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV 120
            P     + + R+LRY+K     GL   K ++  ++A+ DSDWA     ++ST G+CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 WGNLVTWRSKKQSVVARSSAEAKYRAISL 150
             N+++W +K+Q  V+RSS E +YRA++L
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALAL 218

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BLAST of Cmc04g0108081 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 67.8 bits (164), Expect = 8.7e-12
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 40  YLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYT 99
           YL+ TR D+ FAV+ +SQF  A     M+AV ++L Y+K   G+GL +  T+   ++A+ 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 100 DSDWARSVIDKKSTFGYCTFV 121
           DSDWA     ++S  G+C+ V
Sbjct: 62  DSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc04g0108081 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15048.1	1.6e-76	95.97	Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]	[more]
KAA0054216.1	4.7e-76	95.30	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK03082.1	2.2e-73	93.29	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYJ99952.1	6.3e-73	93.29	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	6.3e-73	93.29	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0108081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.6e-26	41.22	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	5.1e-25	38.26	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	6.7e-25	40.27	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	6.1e-18	42.86	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P10978	1.9e-16	37.16	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc04g0108081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CUZ4	7.8e-77	95.97	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]
A0A5A7UIW7	2.3e-76	95.30	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G0...	[more]
A0A5D3BW68	1.1e-73	93.29	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00...	[more]
A0A5D3BJK7	3.1e-73	93.29	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	3.1e-73	93.29	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]

BLAST of Cmc04g0108081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.0e-28	40.54	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.6e-26	38.26	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	8.7e-12	39.51	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF352	SUBFAMILY NOT NAMED	coord: 27..147
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 27..147
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 96..148 e-value: 8.39966E-27 score: 95.9981
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 22..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0108081.1	Cmc04g0108081.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding