Homology
BLAST of Cmc04g0108041 vs. NCBI nr
Match:
KAA0054209.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYK15055.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 585.5 bits (1508), Expect = 2.5e-163
Identity = 283/286 (98.95%), Postives = 285/286 (99.65%), Query Frame = 0
Query: 1 MSFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQ 60
MSFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQ
Sbjct: 172 MSFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQ 231
Query: 61 VVYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVE 120
VVYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVE
Sbjct: 232 VVYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVE 291
Query: 121 YEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVF 180
YEVGDLVF+KIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVF
Sbjct: 292 YEVGDLVFEKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVF 351
Query: 181 NVSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEA 240
NVSQLKKLI ENINVQPT+QQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEA
Sbjct: 352 NVSQLKKLIGENINVQPTIQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEA 411
Query: 241 TQEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKKLHV 287
TQEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKKLHV
Sbjct: 412 TQEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKKLHV 457
BLAST of Cmc04g0108041 vs. NCBI nr
Match:
KAA0063462.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 440.7 bits (1132), Expect = 1.0e-119
Identity = 204/282 (72.34%), Postives = 247/282 (87.59%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRC C++KPKEW++W++W EYWYNTTF+RALGMTPFQV
Sbjct: 473 SSAYHPQSDGQTEVVNRGVEMYLRCLCNDKPKEWIKWIAWAEYWYNTTFQRALGMTPFQV 532
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT+NATLDEQL+ERD + +L++HL+LAQDQMK+ ADKKRR+VEY
Sbjct: 533 VYGRKPPPLLSYGTQVTSNATLDEQLRERDKMILSLREHLRLAQDQMKKQADKKRRDVEY 592
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
EVGD VF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL + + IH VF+
Sbjct: 593 EVGDHVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPEGTLIHPVFH 652
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+INVQPTVQQ++ENF W T P EV+DYR+ K + WEVM+ WE L HEAT
Sbjct: 653 VSQLKKLVGEHINVQPTVQQLDENFVWTTHPVEVLDYRQNKAKEWEVMIRWEGLSNHEAT 712
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E+Y+D+ ++YPNFHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 713 WEQYDDIANKYPNFHLEDKVSLEGRSNVRPPILFQYSRKNKR 754
BLAST of Cmc04g0108041 vs. NCBI nr
Match:
TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 439.5 bits (1129), Expect = 2.2e-119
Identity = 203/282 (71.99%), Postives = 246/282 (87.23%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRC C++KPKEW++W++W EYWYNTTF+RALGMTPFQV
Sbjct: 1274 SSAYHPQSDGQTEVVNRGVEMYLRCLCNDKPKEWIKWIAWAEYWYNTTFQRALGMTPFQV 1333
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT+NATLDEQL+ERD + +L++HL+LAQDQMK+ ADKKRR+VEY
Sbjct: 1334 VYGRKPPPLLSYGTQVTSNATLDEQLRERDKMILSLREHLRLAQDQMKKQADKKRRDVEY 1393
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
EVGD VF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL + + IH VF+
Sbjct: 1394 EVGDRVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPEGTLIHPVFH 1453
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+INVQPTVQQ++ENF W T P E +DYR+ K + WEVM+ WE L HEAT
Sbjct: 1454 VSQLKKLVGEHINVQPTVQQLDENFVWTTHPVEALDYRQNKAKEWEVMIRWEGLSNHEAT 1513
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E+Y+D+ ++YPNFHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 1514 WEQYDDIANKYPNFHLEDKVSLEGRSNVRPPILFQYSRKNKR 1555
BLAST of Cmc04g0108041 vs. NCBI nr
Match:
TYJ95763.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 439.5 bits (1129), Expect = 2.2e-119
Identity = 203/282 (71.99%), Postives = 246/282 (87.23%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRC C++KPKEW++W++W EYWYNTTF+RALGMTPFQV
Sbjct: 1265 SSAYHPQSDGQTEVVNRGVEMYLRCLCNDKPKEWIKWIAWAEYWYNTTFQRALGMTPFQV 1324
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT+NATLDEQL+ERD + +L++HL+LAQDQMK+ ADKKRR+VEY
Sbjct: 1325 VYGRKPPPLLSYGTQVTSNATLDEQLRERDKMILSLREHLRLAQDQMKKQADKKRRDVEY 1384
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
EVGD VF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL + + IH VF+
Sbjct: 1385 EVGDRVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPEGTLIHPVFH 1444
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+INVQPTVQQ++ENF W T P E +DYR+ K + WEVM+ WE L HEAT
Sbjct: 1445 VSQLKKLVGEHINVQPTVQQLDENFVWTTHPVEALDYRQNKAKEWEVMIRWEGLSNHEAT 1504
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E+Y+D+ ++YPNFHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 1505 WEQYDDIANKYPNFHLEDKVSLEGRSNVRPPILFQYSRKNKR 1546
BLAST of Cmc04g0108041 vs. NCBI nr
Match:
TYJ96875.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19540.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 428.3 bits (1100), Expect = 5.1e-116
Identity = 196/282 (69.50%), Postives = 243/282 (86.17%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRCFC++KPKEWV+W++W EYWYNTTF++ALGMTPFQV
Sbjct: 1275 SSAYHPQSDGQTEVVNRGVEVYLRCFCNDKPKEWVKWITWAEYWYNTTFQKALGMTPFQV 1334
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT N TLDEQLKERD + +L+++L+LAQ+QMK+YADK+RR++EY
Sbjct: 1335 VYGRKPPPLLSYGTQVTPNVTLDEQLKERDEMILSLRENLRLAQEQMKKYADKRRRDIEY 1394
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
+VGDLVF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL S+ IH VF+
Sbjct: 1395 KVGDLVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPKSALIHPVFH 1454
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+ ++QPT+QQ++ENF W+T P E +DYR+ K WEVM+ W+ L IHE T
Sbjct: 1455 VSQLKKLVGEHTDIQPTIQQLDENFVWKTHPVEALDYRRNKVGEWEVMIRWDGLSIHETT 1514
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E Y D+ +YP+FHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 1515 WEPYVDVADKYPDFHLEDKVSLEGRSNVRPPILFQYSRKNKR 1556
BLAST of Cmc04g0108041 vs. ExPASy Swiss-Prot
Match:
Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 3.2e-20
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S Y PQ+DGQTE N+ VE LRC CS P WV+ +S + YN A MTPF++
Sbjct: 1074 SLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEI 1133
Query: 62 VYGQQP--PPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNV 121
V+ P PL ++ + + DE +E +K+HL +MK+Y D K + +
Sbjct: 1134 VHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1193
Query: 122 -EYEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHH 181
E++ GDLV K R + ++ KL+ + P+ + ++ GP Y+L+L D SI H
Sbjct: 1194 EEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPD--SIKH 1253
Query: 182 V----FNVSQLKK 188
+ F+VS L+K
Sbjct: 1254 MFSSTFHVSHLEK 1256
BLAST of Cmc04g0108041 vs. ExPASy Swiss-Prot
Match:
P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 3.2e-20
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S Y PQ+DGQTE N+ VE LRC CS P WV+ +S + YN A MTPF++
Sbjct: 1074 SLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEI 1133
Query: 62 VYGQQP--PPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNV 121
V+ P PL ++ + + DE +E +K+HL +MK+Y D K + +
Sbjct: 1134 VHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1193
Query: 122 -EYEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHH 181
E++ GDLV K R + ++ KL+ + P+ + ++ GP Y+L+L D SI H
Sbjct: 1194 EEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPD--SIKH 1253
Query: 182 V----FNVSQLKK 188
+ F+VS L+K
Sbjct: 1254 MFSSTFHVSHLEK 1256
BLAST of Cmc04g0108041 vs. ExPASy Swiss-Prot
Match:
P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 3.2e-20
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S Y PQ+DGQTE N+ VE LRC CS P WV+ +S + YN A MTPF++
Sbjct: 1074 SLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEI 1133
Query: 62 VYGQQP--PPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNV 121
V+ P PL ++ + + DE +E +K+HL +MK+Y D K + +
Sbjct: 1134 VHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1193
Query: 122 -EYEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHH 181
E++ GDLV K R + ++ KL+ + P+ + ++ GP Y+L+L D SI H
Sbjct: 1194 EEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPD--SIKH 1253
Query: 182 V----FNVSQLKK 188
+ F+VS L+K
Sbjct: 1254 MFSSTFHVSHLEK 1256
BLAST of Cmc04g0108041 vs. ExPASy Swiss-Prot
Match:
P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 3.2e-20
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S Y PQ+DGQTE N+ VE LRC CS P WV+ +S + YN A MTPF++
Sbjct: 1074 SLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEI 1133
Query: 62 VYGQQP--PPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNV 121
V+ P PL ++ + + DE +E +K+HL +MK+Y D K + +
Sbjct: 1134 VHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1193
Query: 122 -EYEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHH 181
E++ GDLV K R + ++ KL+ + P+ + ++ GP Y+L+L D SI H
Sbjct: 1194 EEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPD--SIKH 1253
Query: 182 V----FNVSQLKK 188
+ F+VS L+K
Sbjct: 1254 MFSSTFHVSHLEK 1256
BLAST of Cmc04g0108041 vs. ExPASy Swiss-Prot
Match:
P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 3.2e-20
Identity = 67/193 (34.72%), Postives = 102/193 (52.85%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S Y PQ+DGQTE N+ VE LRC CS P WV+ +S + YN A MTPF++
Sbjct: 1074 SLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEI 1133
Query: 62 VYGQQP--PPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNV 121
V+ P PL ++ + + DE +E +K+HL +MK+Y D K + +
Sbjct: 1134 VHRYSPALSPL----ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEI 1193
Query: 122 -EYEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHH 181
E++ GDLV K R + ++ KL+ + P+ + ++ GP Y+L+L D SI H
Sbjct: 1194 EEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPD--SIKH 1253
Query: 182 V----FNVSQLKK 188
+ F+VS L+K
Sbjct: 1254 MFSSTFHVSHLEK 1256
BLAST of Cmc04g0108041 vs. ExPASy TrEMBL
Match:
A0A5A7UL30 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001050 PE=4 SV=1)
HSP 1 Score: 585.5 bits (1508), Expect = 1.2e-163
Identity = 283/286 (98.95%), Postives = 285/286 (99.65%), Query Frame = 0
Query: 1 MSFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQ 60
MSFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQ
Sbjct: 172 MSFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQ 231
Query: 61 VVYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVE 120
VVYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVE
Sbjct: 232 VVYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVE 291
Query: 121 YEVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVF 180
YEVGDLVF+KIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVF
Sbjct: 292 YEVGDLVFEKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVF 351
Query: 181 NVSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEA 240
NVSQLKKLI ENINVQPT+QQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEA
Sbjct: 352 NVSQLKKLIGENINVQPTIQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEA 411
Query: 241 TQEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKKLHV 287
TQEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKKLHV
Sbjct: 412 TQEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKKLHV 457
BLAST of Cmc04g0108041 vs. ExPASy TrEMBL
Match:
A0A5A7V5C5 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00480 PE=4 SV=1)
HSP 1 Score: 440.7 bits (1132), Expect = 4.8e-120
Identity = 204/282 (72.34%), Postives = 247/282 (87.59%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRC C++KPKEW++W++W EYWYNTTF+RALGMTPFQV
Sbjct: 473 SSAYHPQSDGQTEVVNRGVEMYLRCLCNDKPKEWIKWIAWAEYWYNTTFQRALGMTPFQV 532
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT+NATLDEQL+ERD + +L++HL+LAQDQMK+ ADKKRR+VEY
Sbjct: 533 VYGRKPPPLLSYGTQVTSNATLDEQLRERDKMILSLREHLRLAQDQMKKQADKKRRDVEY 592
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
EVGD VF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL + + IH VF+
Sbjct: 593 EVGDHVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPEGTLIHPVFH 652
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+INVQPTVQQ++ENF W T P EV+DYR+ K + WEVM+ WE L HEAT
Sbjct: 653 VSQLKKLVGEHINVQPTVQQLDENFVWTTHPVEVLDYRQNKAKEWEVMIRWEGLSNHEAT 712
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E+Y+D+ ++YPNFHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 713 WEQYDDIANKYPNFHLEDKVSLEGRSNVRPPILFQYSRKNKR 754
BLAST of Cmc04g0108041 vs. ExPASy TrEMBL
Match:
A0A5D3B8Y6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00260 PE=4 SV=1)
HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 203/282 (71.99%), Postives = 246/282 (87.23%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRC C++KPKEW++W++W EYWYNTTF+RALGMTPFQV
Sbjct: 1265 SSAYHPQSDGQTEVVNRGVEMYLRCLCNDKPKEWIKWIAWAEYWYNTTFQRALGMTPFQV 1324
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT+NATLDEQL+ERD + +L++HL+LAQDQMK+ ADKKRR+VEY
Sbjct: 1325 VYGRKPPPLLSYGTQVTSNATLDEQLRERDKMILSLREHLRLAQDQMKKQADKKRRDVEY 1384
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
EVGD VF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL + + IH VF+
Sbjct: 1385 EVGDRVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPEGTLIHPVFH 1444
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+INVQPTVQQ++ENF W T P E +DYR+ K + WEVM+ WE L HEAT
Sbjct: 1445 VSQLKKLVGEHINVQPTVQQLDENFVWTTHPVEALDYRQNKAKEWEVMIRWEGLSNHEAT 1504
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E+Y+D+ ++YPNFHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 1505 WEQYDDIANKYPNFHLEDKVSLEGRSNVRPPILFQYSRKNKR 1546
BLAST of Cmc04g0108041 vs. ExPASy TrEMBL
Match:
A0A5D3DFT1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001370 PE=4 SV=1)
HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 203/282 (71.99%), Postives = 246/282 (87.23%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRC C++KPKEW++W++W EYWYNTTF+RALGMTPFQV
Sbjct: 1274 SSAYHPQSDGQTEVVNRGVEMYLRCLCNDKPKEWIKWIAWAEYWYNTTFQRALGMTPFQV 1333
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT+NATLDEQL+ERD + +L++HL+LAQDQMK+ ADKKRR+VEY
Sbjct: 1334 VYGRKPPPLLSYGTQVTSNATLDEQLRERDKMILSLREHLRLAQDQMKKQADKKRRDVEY 1393
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
EVGD VF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL + + IH VF+
Sbjct: 1394 EVGDRVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPEGTLIHPVFH 1453
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+INVQPTVQQ++ENF W T P E +DYR+ K + WEVM+ WE L HEAT
Sbjct: 1454 VSQLKKLVGEHINVQPTVQQLDENFVWTTHPVEALDYRQNKAKEWEVMIRWEGLSNHEAT 1513
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E+Y+D+ ++YPNFHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 1514 WEQYDDIANKYPNFHLEDKVSLEGRSNVRPPILFQYSRKNKR 1555
BLAST of Cmc04g0108041 vs. ExPASy TrEMBL
Match:
A0A5D3BEL2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00340 PE=4 SV=1)
HSP 1 Score: 428.3 bits (1100), Expect = 2.5e-116
Identity = 196/282 (69.50%), Postives = 243/282 (86.17%), Query Frame = 0
Query: 2 SFAYHPQSDGQTEVVNRGVEIYLRCFCSEKPKEWVEWLSWTEYWYNTTFERALGMTPFQV 61
S AYHPQSDGQTEVVNRGVE+YLRCFC++KPKEWV+W++W EYWYNTTF++ALGMTPFQV
Sbjct: 1275 SSAYHPQSDGQTEVVNRGVEVYLRCFCNDKPKEWVKWITWAEYWYNTTFQKALGMTPFQV 1334
Query: 62 VYGQQPPPLIYYGDVVTTNATLDEQLKERDLTLAALKDHLQLAQDQMKRYADKKRRNVEY 121
VYG++PPPL+ YG VT N TLDEQLKERD + +L+++L+LAQ+QMK+YADK+RR++EY
Sbjct: 1335 VYGRKPPPLLSYGTQVTPNVTLDEQLKERDEMILSLRENLRLAQEQMKKYADKRRRDIEY 1394
Query: 122 EVGDLVFQKIRPYRQLSLRRKRNEKLSSKYFEPYKIFERIGPIAYKLELSDSSSIHHVFN 181
+VGDLVF KIRPYRQLSLRRKRNEKLS+KYF PYKI ERIGP+AYKLEL S+ IH VF+
Sbjct: 1395 KVGDLVFLKIRPYRQLSLRRKRNEKLSAKYFGPYKILERIGPVAYKLELPKSALIHPVFH 1454
Query: 182 VSQLKKLIEENINVQPTVQQINENFEWETKPTEVVDYRKTKTRNWEVMVSWERLPIHEAT 241
VSQLKKL+ E+ ++QPT+QQ++ENF W+T P E +DYR+ K WEVM+ W+ L IHE T
Sbjct: 1455 VSQLKKLVGEHTDIQPTIQQLDENFVWKTHPVEALDYRRNKVGEWEVMIRWDGLSIHETT 1514
Query: 242 QEEYEDMQHRYPNFHLEDKVNLEGRGNVKPPVIHHYSRKNKK 284
E Y D+ +YP+FHLEDKV+LEGR NV+PP++ YSRKNK+
Sbjct: 1515 WEPYVDVADKYPDFHLEDKVSLEGRSNVRPPILFQYSRKNKR 1556
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0054209.1 | 2.5e-163 | 98.95 | putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYK15055.1 put... | [more] |
| KAA0063462.1 | 1.0e-119 | 72.34 | Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | [more] |
| TYK22240.1 | 2.2e-119 | 71.99 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| TYJ95763.1 | 2.2e-119 | 71.99 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
| TYJ96875.1 | 5.1e-116 | 69.50 | Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19540.1 Ty3/gyp... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9UR07 | 3.2e-20 | 34.72 | Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
| P0CT41 | 3.2e-20 | 34.72 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
| P0CT34 | 3.2e-20 | 34.72 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| P0CT35 | 3.2e-20 | 34.72 | Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| P0CT36 | 3.2e-20 | 34.72 | Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UL30 | 1.2e-163 | 98.95 | Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| A0A5A7V5C5 | 4.8e-120 | 72.34 | Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5D3B8Y6 | 1.1e-119 | 71.99 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3DFT1 | 1.1e-119 | 71.99 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3BEL2 | 2.5e-116 | 69.50 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
