Cmc04g0107311 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0107311
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein FAR1-RELATED SEQUENCE
Location	CMiso1.1chr04: 25805063 .. 25806586 (-)
RNA-Seq Expression	Cmc04g0107311
Synteny	Cmc04g0107311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTAGGGTAAATAAAAGAAATAGTGAGAAAAGGCGTTGGATAAGAAAGTGCGCAGGAAGTATAACTAAGGCAAATTAGGGCTCTGCTCCTTTCACTTTCACGTCTTCGTGCCGCCATATACACCTTTAAATCCCGGTAAAGACAATCTCTCTCTCTCTATCCCAGTTTTCCCTACTCCCGATTCGTAATCATGAATGAATTCGAAGGAATTTGTTTGCCCGTTCGATTCTTTACGGAATACACACCTGATCCAGATTGCTAATTTTTTTTTCGGAATGAAAATTTGACGTGTAGGCCTTCTTCTTGTTTAAAATTTGTGCCAATTTGATTATGATCTCCGCAGTCGAAGGTTTTAGTTCATTTGGTCAATTCTGGCTTTTATCTGAATATGATGACATAACAGTTGCAAGGAAAGTTTTTAAGAATTCATTACCAGCTGTCTGCACTCTATTTGAGCTCTGGGAGGGCATTTCACGGGCCGTGTGATCACATTCTTGTTTCTTCTTTTCAGTTTTTAGAAACAAAAGCATTTAGTTGCAAACAGCTCTTATTTCTCATCTCGTTTGTCAGACACGTTTTAAAAATTTGTATACATTTTAGAAACGGCAATATCAAGTTTTATTTCTTGTTCCTCCATCGTTTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTTATAAAATGCACAATTGTAAATAATCATACAAATTTTGGGTATTTAATCTTTTAAAAGATAACTTTCGTATGAGTTCATAGAACGAGGGACCAGAAGTGGTCACAAAACCTCTTTCTACTTGTTTTTTAAAATAAAAAAGGAATGCAAAAAGATAAGAAACAGTTACTAAAGGTAGTTCGATTTCTCCTTTTAAAAAAAGAGTGAACAGAAACAACAGATGAGAAACATGATTTGTGAATCAAGAAACATGTTCTTCTTGGGATAAAATTGTTTGTACTTGTAATCTTTAAATTCTCATTTGGCATGGTTTTATTGCTTCCTCATTGCTTCACATTCCTAAGACAAAAAATGAAGAGTACTGGATCTTTTAAACTTTTCATTTTATTGATAAGTTTTGCCCCATACTCATGCACGTTTACTGATTTCTAAAGCTCAAGCAAGGGTATTAACTTGAACTCGAGAAGTTAAATGAGATATGATGTCTGAAGATACTGGACCGTTGTTGGTCGTGTATGATGATCCCTCTGACCAACAGTCCTTATCTTTAGACGAAACCGGCAGCACAGAGGAGTCACCTGATGAAACCAGGCTGTCCCTGGATTCAAGTAATGATGCCACTCCATATATAGGGCAAAGGTTTCCTACTCATGACTCTGCTTATGAGTTTTATAGTGAATTTGCTAAGAGATGTGGCTTCTCGATCCGAAGACACCGAACAGAGGGAAAAGATGGGATTGGGAAAGGCCTCACAAGGCGCTATTTTCTTTGCCATCGTGCTGGGAGCACACCTATTAAGACACCAAACGAAAATAAGCCTCAGAGAAATTGAAAATCCTCT

mRNA sequence

TTTATTAGGGTAAATAAAAGAAATAGTGAGAAAAGGCGTTGGATAAGAAAGTGCGCAGGAAGTATAACTAAGGCAAATTAGGGCTCTGCTCCTTTCACTTTCACGTCTTCGTGCCGCCATATACACCTTTAAATCCCGCTCAAGCAAGGGTATTAACTTGAACTCGAGAAGTTAAATGAGATATGATGTCTGAAGATACTGGACCGTTGTTGGTCGTGTATGATGATCCCTCTGACCAACAGTCCTTATCTTTAGACGAAACCGGCAGCACAGAGGAGTCACCTGATGAAACCAGGCTGTCCCTGGATTCAAGTAATGATGCCACTCCATATATAGGGCAAAGGTTTCCTACTCATGACTCTGCTTATGAGTTTTATAGTGAATTTGCTAAGAGATGTGGCTTCTCGATCCGAAGACACCGAACAGAGGGAAAAGATGGGATTGGGAAAGGCCTCACAAGGCGCTATTTTCTTTGCCATCGTGCTGGGAGCACACCTATTAAGACACCAAACGAAAATAAGCCTCAGAGAAATTGAAAATCCTCT

Coding sequence (CDS)

ATGATGTCTGAAGATACTGGACCGTTGTTGGTCGTGTATGATGATCCCTCTGACCAACAGTCCTTATCTTTAGACGAAACCGGCAGCACAGAGGAGTCACCTGATGAAACCAGGCTGTCCCTGGATTCAAGTAATGATGCCACTCCATATATAGGGCAAAGGTTTCCTACTCATGACTCTGCTTATGAGTTTTATAGTGAATTTGCTAAGAGATGTGGCTTCTCGATCCGAAGACACCGAACAGAGGGAAAAGATGGGATTGGGAAAGGCCTCACAAGGCGCTATTTTCTTTGCCATCGTGCTGGGAGCACACCTATTAAGACACCAAACGAAAATAAGCCTCAGAGAAATTGA

Protein sequence

MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDSAYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN

Homology

[Close]

BLAST of Cmc04g0107311 vs. NCBI nr
Match: KAA0032853.1 (protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo var. makuwa] >TYK30570.1 protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 6.2e-60
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. NCBI nr
Match: XP_031741847.1 (protein FAR1-RELATED SEQUENCE 11-like [Cucumis sativus] >XP_031741848.1 protein FAR1-RELATED SEQUENCE 11-like [Cucumis sativus] >XP_031741849.1 protein FAR1-RELATED SEQUENCE 11-like [Cucumis sativus] >KAE8648152.1 hypothetical protein Csa_018416 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. NCBI nr
Match: XP_016903356.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo] >KAA0065555.1 protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo var. makuwa] >TYK29264.1 protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. NCBI nr
Match: XP_031745802.1 (LOW QUALITY PROTEIN: protein FAR1-RELATED SEQUENCE 11 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. NCBI nr
Match: KAE8637286.1 (hypothetical protein CSA_004538 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. ExPASy Swiss-Prot
Match: Q9SY66 (Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana OX=3702 GN=FRS11 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.3e-46
Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   MSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDSA 61
           MS+D G +L++YDDPSDQ+SLSLD+  STEESPD+  LSL++ ++A PY+GQ F THD+A
Sbjct: 1   MSDDPGQMLLIYDDPSDQRSLSLDDASSTEESPDDNNLSLEAVHNAIPYLGQIFLTHDTA 60

Query: 62  YEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           YEFYS FAKRCGFSIRRHRTEGKDG+GKGLTRRYF+CHRAG+TPIKT +E KPQRN
Sbjct: 61  YEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQRN 116

[Close]

BLAST of Cmc04g0107311 vs. ExPASy Swiss-Prot
Match: Q9LKR4 (Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana OX=3702 GN=FRS10 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-09
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 48  TPYIGQRFPTHDSAYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAG-STPI 107
           TPY+GQ F T D A+E+YS FA++ GFSIR+ R+     +  G+ RR F+C+R+G + P 
Sbjct: 54  TPYVGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNL--GVYRRDFVCYRSGFNQPR 113

Query: 108 KTPNENKPQ 116
           K  N   P+
Sbjct: 114 KKANVEHPR 120

[Close]

BLAST of Cmc04g0107311 vs. ExPASy TrEMBL
Match: A0A5D3E4R9 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold799G00150 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.0e-60
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. ExPASy TrEMBL
Match: A0A1S4E549 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103502896 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. ExPASy TrEMBL
Match: A0A5A7VIG2 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00280 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. ExPASy TrEMBL
Match: A0A0A0KPF5 (Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_5G003630 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. ExPASy TrEMBL
Match: A0A1S4E547 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103502896 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60
           MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS
Sbjct: 1   MMSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDS 60

Query: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYF+CHRAGSTPIKTPNENKPQRN
Sbjct: 61  AYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGSTPIKTPNENKPQRN 117

[Close]

BLAST of Cmc04g0107311 vs. TAIR 10
Match: AT1G10240.1 (FAR1-related sequence 11 )

HSP 1 Score: 184.9 bits (468), Expect = 3.8e-47
Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 2   MSEDTGPLLVVYDDPSDQQSLSLDETGSTEESPDETRLSLDSSNDATPYIGQRFPTHDSA 61
           MS+D G +L++YDDPSDQ+SLSLD+  STEESPD+  LSL++ ++A PY+GQ F THD+A
Sbjct: 1   MSDDPGQMLLIYDDPSDQRSLSLDDASSTEESPDDNNLSLEAVHNAIPYLGQIFLTHDTA 60

Query: 62  YEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAGSTPIKTPNENKPQRN 118
           YEFYS FAKRCGFSIRRHRTEGKDG+GKGLTRRYF+CHRAG+TPIKT +E KPQRN
Sbjct: 61  YEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQRN 116

[Close]

BLAST of Cmc04g0107311 vs. TAIR 10
Match: AT5G28530.1 (FAR1-related sequence 10 )

HSP 1 Score: 62.0 bits (149), Expect = 3.7e-10
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 48  TPYIGQRFPTHDSAYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFLCHRAG-STPI 107
           TPY+GQ F T D A+E+YS FA++ GFSIR+ R+     +  G+ RR F+C+R+G + P 
Sbjct: 54  TPYVGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNL--GVYRRDFVCYRSGFNQPR 113

Query: 108 KTPNENKPQ 116
           K  N   P+
Sbjct: 114 KKANVEHPR 120

[Close]

BLAST of Cmc04g0107311 vs. TAIR 10
Match: AT4G15090.1 (FRS (FAR1 Related Sequences) transcription factor family )

HSP 1 Score: 41.2 bits (95), Expect = 6.7e-04
Identity = 27/74 (36.49%), Postives = 35/74 (47.30%), Query Frame = 0


Query: 46  DATPYIGQRFPTHDSAYEFYSEFAKRCGF--SIRRHRTEGKDGIGKGLTRRYFLCHRAGS 105
           D  P  G  F TH++AY FY E+AK  GF  SI+  R   K    K      F C R G 
Sbjct: 48  DLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKT---KDFIDAKFACSRYGV 107

Query: 106 TPIKTPNENKPQRN 118
           TP    + +  +R+
Sbjct: 108 TPESESSGSSSRRS 118

[Close]

BLAST of Cmc04g0107311 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 41.2 bits (95), Expect = 6.7e-04
Identity = 23/59 (38.98%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 49  PYIGQRFPTHDSAYEFYSEFAKRCGFSIR--RHRTEGKDGIGKGLTRRYFLCHRAGSTP 106
           PY+G +F + + A +FY E++KR GF +R  + R  G D  G+ L RR   C++ G  P
Sbjct: 10  PYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGID--GRTLARR-LGCNKQGFGP 65

[Close]

BLAST of Cmc04g0107311 vs. TAIR 10
Match: AT4G12850.2 (Far-red impaired responsive (FAR1) family protein )

HSP 1 Score: 41.2 bits (95), Expect = 6.7e-04
Identity = 23/59 (38.98%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 49  PYIGQRFPTHDSAYEFYSEFAKRCGFSIR--RHRTEGKDGIGKGLTRRYFLCHRAGSTP 106
           PY+G +F + + A +FY E++KR GF +R  + R  G D  G+ L RR   C++ G  P
Sbjct: 11  PYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGID--GRTLARR-LGCNKQGFGP 66

The following BLAST results are available for this feature:

BLAST of Cmc04g0107311 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032853.1	6.2e-60	100.00	protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo var. makuwa] >TYK30570...	[more]
XP_031741847.1	1.4e-59	99.15	protein FAR1-RELATED SEQUENCE 11-like [Cucumis sativus] >XP_031741848.1 protein ...	[more]
XP_016903356.1	1.4e-59	99.15	PREDICTED: protein FAR1-RELATED SEQUENCE 11 isoform X3 [Cucumis melo] >KAA006555...	[more]
XP_031745802.1	1.4e-59	99.15	LOW QUALITY PROTEIN: protein FAR1-RELATED SEQUENCE 11 [Cucumis sativus]	[more]
KAE8637286.1	1.4e-59	99.15	hypothetical protein CSA_004538 [Cucumis sativus]	[more]

BLAST of Cmc04g0107311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY66	5.3e-46	74.14	Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana OX=3702 GN=FRS11 PE=1 S...	[more]
Q9LKR4	5.2e-09	44.93	Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana OX=3702 GN=FRS...	[more]

BLAST of Cmc04g0107311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4R9	3.0e-60	100.00	Protein FAR1-RELATED SEQUENCE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S4E549	6.7e-60	99.15	Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103502896 PE=3 SV=1	[more]
A0A5A7VIG2	6.7e-60	99.15	Protein FAR1-RELATED SEQUENCE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0KPF5	6.7e-60	99.15	Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_5G003630 PE=3 SV...	[more]
A0A1S4E547	6.7e-60	99.15	Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103502896 PE=3 SV=1	[more]

BLAST of Cmc04g0107311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10240.1	3.8e-47	74.14	FAR1-related sequence 11	[more]
AT5G28530.1	3.7e-10	44.93	FAR1-related sequence 10	[more]
AT4G15090.1	6.7e-04	36.49	FRS (FAR1 Related Sequences) transcription factor family	[more]
AT4G12850.1	6.7e-04	38.98	Far-red impaired responsive (FAR1) family protein	[more]
AT4G12850.2	6.7e-04	38.98	Far-red impaired responsive (FAR1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 63..111 e-value: 1.7E-6 score: 28.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR31669:SF184	PROTEIN FAR1-RELATED SEQUENCE 11	coord: 13..112
IPR031052	FHY3/FAR1 family	PANTHER	PTHR31669	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	coord: 13..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0107311.1	Cmc04g0107311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding