Homology
BLAST of Cmc04g0106201 vs. NCBI nr
Match:
RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 940.3 bits (2429), Expect = 1.3e-269
Identity = 503/1007 (49.95%), Postives = 636/1007 (63.16%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPS--HKRLHHSDSNTKSVF-----------NTVVPK 65
+D +LLQG L+ GLY+F + K S SN K+ N+ P+
Sbjct: 454 KDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPE 513
Query: 66 ---SNTPLLDLWHRRLGHPHLPIVKAFLNHIDHSSGTINKLNFCEACALGKHHALPFSHS 125
S+ + DLWH+RLGHP IV LN T + + C AC LGK H LPF S
Sbjct: 514 KTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPIS 573
Query: 126 LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFK 185
T+YT PLQL+ DLWGPA S GF YY+SFVDAYSRYTW+YFL KS AF FK
Sbjct: 574 QTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFK 633
Query: 186 TCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEM 245
E G +K+ QTD G EF+ K + +Q+GI HR++CP+TSKQNGI+ERKHRHI+E+
Sbjct: 634 AQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVEL 693
Query: 246 GLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKC 305
GLTLL+QA+LPL +W +AFST+V+LINRLPT VL P E LF KPN+ L+VFGC C
Sbjct: 694 GLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLC 753
Query: 306 YPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA---- 365
+P+LRPY HKL RS+PCTFLGYS+ HKGYKCL GR+FISR V+FDE FP+A
Sbjct: 754 FPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQ 813
Query: 366 ---SFASHSS-----IPKSNNV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVFD 425
SHS+ IP N+ LS P S S ++ N D R
Sbjct: 814 KPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLS 873
Query: 426 NTDH------LNPTI-------------VYPLETGTQESPRDDGNSGGITQSPSP----- 485
NTD LN + PL T + E P + N+ +T P
Sbjct: 874 NTDSSSTVPILNESASIPSSSNLYALPGTIPLSTNSDE-PNESINTRPVTFPQQPHHMVT 933
Query: 486 -----------------MEPLHQTDSAFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQK 545
+E + A +HP WK+ M+EEF AL KN TWSL N+
Sbjct: 934 RSKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRT 993
Query: 546 IVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIM 605
VGC+WVFK+KRN DGS+SRYKARLVAKG+ Q P D+ ETFSPVVKP TIR+ L IA+
Sbjct: 994 SVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVS 1053
Query: 606 KGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSS--YPMVCHLKKALYGLKQAPRAWY 665
+ W IRQLDVNNAFL+G L E VYM QP GF+ K++ +VC L KALYGLKQAPRAW+
Sbjct: 1054 QSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWF 1113
Query: 666 EKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQ 725
+KL SL GF ++K+D SL + T +VL+ VDD+++ SS ++++ L+ L
Sbjct: 1114 DKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGL 1173
Query: 726 FALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSA 785
F+LKDLG+LSYFLG+EV +GGL LSQ KYI DLL++TKM AK + TPM+SG LSA
Sbjct: 1174 FSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSA 1233
Query: 786 FQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKG 845
G+P +V YRSVVGALQY T+T PEI++SVNK CQFM P THW+ VKRILRYL G
Sbjct: 1234 GMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNG 1293
Query: 846 VLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSS 905
G+ + S+ M+LVGF DADW SD DDR+STSG CV+ G +LV W SKK SRSS
Sbjct: 1294 TTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSS 1353
Query: 906 TEAEYRCLALLATELVWICSLLNDLYIDLPFPPILWCDNLSAVHLSANPILHSKTKCVEF 932
TEAEYR LA L +E++W+ SLL++L + P++WCDN+S V LSANP+LHS+TK +E
Sbjct: 1354 TEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMEL 1413
BLAST of Cmc04g0106201 vs. NCBI nr
Match:
CAN81099.1 (hypothetical protein VITISV_017741 [Vitis vinifera])
HSP 1 Score: 926.8 bits (2394), Expect = 1.5e-265
Identity = 480/992 (48.39%), Postives = 645/992 (65.02%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSDSNTK-------SVFNTVVPKSNTPLL 65
+D T VL+ G + DGLY F SH L + S +K S + V S +
Sbjct: 464 KDQVTQAVLMVGKVRDGLYAF--DSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTF 523
Query: 66 DLWHRRLGHPHLPIVKAFLNHIDHSSGTINKL--NFCEACALGKHHALPFSHSLTLYTHP 125
DLWH+RLGHP +K L+ + + INK+ NFC +C LGK H PFS S T YT P
Sbjct: 524 DLWHKRLGHPSAATIKNVLSKCNVAH--INKMDSNFCSSCCLGKIHRFPFSLSHTTYTKP 583
Query: 126 LQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEKSL 185
L+LI DLWGP + +S++G+RYYI FVDA+SR++WI+ L KS+A F FKT VE
Sbjct: 584 LELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQF 643
Query: 186 GQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLTLLSQ 245
IKSLQTD G EF+ F+ +L ++GI HR++CP+T +QNG+ ERKHR I+E GLTLL
Sbjct: 644 DLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHT 703
Query: 246 ATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPY 305
A+LPL FWDE+F T VYL NRLPT +L + P+E LF P++ L+VFGC C+P LRPY
Sbjct: 704 ASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPY 763
Query: 306 QSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS---------- 365
+HKL RS CTFLGYS HKGYKC++S+GR++IS V+F+E SFPY+
Sbjct: 764 NTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLS 823
Query: 366 ----FASHSSIPKSNNVLSP--------PLHSIIPSSLMN-----HNEDRRHTDTVFDNT 425
SH S S VLSP P+ S P S M+ H DT
Sbjct: 824 TVSPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVSTHPHAPNSADTTLTPA 883
Query: 426 DHLNPTIVYPLE---------TGTQESPRDDGNS--------GGITQSPSPMEPLHQTDS 485
++ + P++ + T+ +D N+ GI + + + + S
Sbjct: 884 QVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAIREPSS 943
Query: 486 ---AFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKA 545
A WKK M E++ALQ+N TWSL P ++ +GCKWV+K K N DG++ +YKA
Sbjct: 944 VSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKA 1003
Query: 546 RLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENV 605
RLVAKGFHQ D+ ETFSPVVKP T+R+ TIA+ + W+I+QLDVNNAFL+G+L E V
Sbjct: 1004 RLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEV 1063
Query: 606 YMKQPFGFEVKSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHV 665
+M+QP GF + + +VC L KALYGLKQAPRAW+EKL +L S GF ++K+D SL +
Sbjct: 1064 FMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRF 1123
Query: 666 TPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGL 725
TP YVL+ VDD++++ S + SL+ LNS+F+LKDLG++ YFLG++VS+ TN GL
Sbjct: 1124 TPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSH-TNNGL 1183
Query: 726 FLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLT 785
LSQ+KYI DLLQ+TKM+ KP TP+ +G L G+P D+H YRS VGALQY T+T
Sbjct: 1184 HLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTIT 1243
Query: 786 HPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWA 845
PE+S+SVNK CQFM P HW++VKRILRYL+G L HGL +KS N+ L+GF DADWA
Sbjct: 1244 RPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWA 1303
Query: 846 SDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDL 905
SD DDR+STSG CV+ G NL+ W SKK I+SRSS E EYR LA L E+ W+ SLL++L
Sbjct: 1304 SDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSEL 1363
Query: 906 YIDLPFPPILWCDNLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQI 942
+ L PP++WCDNLS V LSANP+LH++TK +E D+YFVR+ + + ++ +RH+P+ +Q+
Sbjct: 1364 QLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVPSADQL 1423
BLAST of Cmc04g0106201 vs. NCBI nr
Match:
RVX14937.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 921.4 bits (2380), Expect = 6.3e-264
Identity = 481/982 (48.98%), Postives = 640/982 (65.17%), Query Frame = 0
Query: 17 GLLNDGLYKFTIQPSHKRLHHSDSNTK-------SVFNTVVPKSNTPLLDLWHRRLGHPH 76
G + DGLY F SH L + S +K S + V S + DLWH+RLG P
Sbjct: 432 GKVRDGLYAF--DSSHLALRPTQSLSKSPSVVASSFSSKVCIASLSSTFDLWHKRLGQPS 491
Query: 77 LPIVKAFLNHIDHSSGTINKL--NFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGP 136
+K L+ + + INK+ NFC +C LGK H PFS S T YT PL+LI DLWGP
Sbjct: 492 AATIKNVLSKCNVAH--INKMDSNFCSSCCLGKIHMFPFSLSHTTYTKPLELIHSDLWGP 551
Query: 137 AVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEKSLGQSIKSLQTDG 196
A +S++G+RYYI FVDA+SR++WI+ L KS+A F FKT VE IKSLQTD
Sbjct: 552 APVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDW 611
Query: 197 GTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLTLLSQATLPLSFWDEA 256
G EF+ F+ +L ++GI HR++CP+T +QNG+ ERKHR I+E GLTLL +LPL FWDE+
Sbjct: 612 GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTVSLPLKFWDES 671
Query: 257 FSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTP 316
F T VYL NRLPT VL + P+E LF P++ L+VFGC C+P LRPY +HKL RS
Sbjct: 672 FRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEE 731
Query: 317 CTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS--------------FASHSSI 376
CTFLGYS HKGYKC++S+GR++ISR V+F+E SFPY+ SH S
Sbjct: 732 CTFLGYSLKHKGYKCMSSNGRVYISRDVIFNETSFPYSKTIQVSSCLPSTVSPSTSHLSP 791
Query: 377 PKSNNVLSP--------PLHSIIPSSLMN-----HNEDRRHTDTVFDNTDHLNPTIVYPL 436
S VLSP P+ S P S M+ H DT ++ + P+
Sbjct: 792 SASPPVLSPTMLPAPTSPISSARPISEMDNIVSTHPHAPNSADTTLTPAQVVSNPVATPV 851
Query: 437 E---------TGTQESPRD-DGNSGGITQSPSPM-----------EPLHQTDSAFNHPHW 496
+ + T+ +D D IT++ S + EP +A W
Sbjct: 852 QHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAVREP-SSVSAALQQDEW 911
Query: 497 KKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLVAKGFHQT 556
KK M E++ALQ+N TWSL P ++ +GCKWV+K K N DG++ +YKARLVAKGFHQ
Sbjct: 912 KKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQ 971
Query: 557 PNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEV 616
D+ ETFSPVVKP TIR+ TIA+ + W+I+QLDVNNAFL+G+L E V+M+QP GF
Sbjct: 972 AGFDFTETFSPVVKPSTIRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFID 1031
Query: 617 KSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLI 676
+ + +VC L KALYGLKQAPRAW+EKL +L S GF ++K+D SL + TP+ YVL+
Sbjct: 1032 EKNPNLVCRLHKALYGLKQAPRAWFEKLHQALLSFGFVSAKSDQSLFLRFTPSHITYVLV 1091
Query: 677 CVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITD 736
VDD++++ S + SL+ LNS+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI D
Sbjct: 1092 YVDDILVIGSDTTTITSLIAQLNSEFSLKDLGEVHYFLGIQVSH-TNNGLHLSQTKYIRD 1151
Query: 737 LLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNK 796
LLQ+TKM+ KP TP+ +G L A G+P D+H YRS VGALQY T+T PE+S+SVNK
Sbjct: 1152 LLQKTKMVHCKPARTPLPTGLKLRAGDGDPVDDLHGYRSTVGALQYVTITRPELSFSVNK 1211
Query: 797 ACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTS 856
CQFM P HW+ VKRILRYL+G L HGL +KS N+ L+GF DADWASD DDR+STS
Sbjct: 1212 VCQFMQNPTEEHWKAVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTS 1271
Query: 857 GFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDLYIDLPFPPIL 916
G CV+ G NL+ W SKK +SRSSTEAEYR LA L E+ W+ SLL++L + L PP++
Sbjct: 1272 GHCVFLGPNLISWQSKKQHTVSRSSTEAEYRSLAGLVAEITWLRSLLSELQLPLAKPPLV 1331
Query: 917 WCDNLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQIADILTKPLSA 942
WCDNLS V LSANP+LH++TK +E D+YFV + + + ++ +RH+P+ +Q+AD+LTK +S+
Sbjct: 1332 WCDNLSTVLLSANPVLHARTKHIELDLYFVHEKVIRKEVEVRHVPSADQLADVLTKTVSS 1391
BLAST of Cmc04g0106201 vs. NCBI nr
Match:
KAA0052371.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09417.1 putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 919.1 bits (2374), Expect = 3.1e-263
Identity = 455/499 (91.18%), Postives = 464/499 (92.99%), Query Frame = 0
Query: 443 MEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNI 502
MEEEFEALQKN TW LTPQNPNQKIVGCKWVFKIKRNS G I+RYKARLVAKGFHQTPNI
Sbjct: 1 MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPIARYKARLVAKGFHQTPNI 60
Query: 503 DYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSS 562
DYNETFSPVVK +TI M LTIAIMKGWSIRQLDVNNAFLHGNLDENVYM+Q FGFEVKSS
Sbjct: 61 DYNETFSPVVKSITICMLLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMEQIFGFEVKSS 120
Query: 563 YPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLICVD 622
YPMVCHLKKALYGLKQAPRAWYE LS LHSLGFRTSKADTSLLI VTPT CCY LI VD
Sbjct: 121 YPMVCHLKKALYGLKQAPRAWYENLSLGLHSLGFRTSKADTSLLIRVTPTSCCYALIYVD 180
Query: 623 DLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQ 682
DLIIM SS+KDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNG LFLSQSKYITDLLQ
Sbjct: 181 DLIIMGSSKKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGDLFLSQSKYITDLLQ 240
Query: 683 RTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNKACQ 742
RTKML+AKPISTPMVSGPLLSAFQGEPFHDVHL RSVVGALQYATLTHPEISYSVNKACQ
Sbjct: 241 RTKMLDAKPISTPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ 300
Query: 743 FMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFC 802
FMHTPKHTHWQLVKRILRYLKGVLYHGLW KSDN SLVGFADADWASDPDDRKSTSG C
Sbjct: 301 FMHTPKHTHWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLC 360
Query: 803 VYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDLYIDLPFPPILWCD 862
VYFGNNLV WGSKK SIISRSSTEAEYRCLALLATE+VWI SLLNDLYIDLPFPPIL CD
Sbjct: 361 VYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCD 420
Query: 863 NLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQIADILTKPLSAQSF 922
NLSAVH SANPILHSKTK VE DIYFVRDLI+K KL +RHLPATEQIADILTKPLSAQSF
Sbjct: 421 NLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSF 480
Query: 923 HTLKNKLTVIDSTTIGLQG 942
H LKN +TVIDS IGLQG
Sbjct: 481 HKLKNNITVIDSAVIGLQG 499
BLAST of Cmc04g0106201 vs. NCBI nr
Match:
RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 911.4 bits (2354), Expect = 6.6e-261
Identity = 493/1007 (48.96%), Postives = 625/1007 (62.07%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPS--HKRLHHSDSNTKSVF-----------NTVVPK 65
+D +LLQG L+ GLY+F + K S SN K+ N+ P+
Sbjct: 590 KDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPE 649
Query: 66 ---SNTPLLDLWHRRLGHPHLPIVKAFLNHIDHSSGTINKLNFCEACALGKHHALPFSHS 125
S+ + DLWH+RLGHP IV LN T + + C AC LGK H LPF S
Sbjct: 650 KTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPIS 709
Query: 126 LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFK 185
T+YT PLQL+ DLWGPA S GF YY+SFVDAYSRYTW+YFL KS AF FK
Sbjct: 710 QTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFK 769
Query: 186 TCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEM 245
E G +K+ QTD G EF+ K + +Q+GI HR++CP+TSKQNGI+ERKHRHI+E+
Sbjct: 770 AQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVEL 829
Query: 246 GLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKC 305
GLTLL+QA+LPL +W +AFST+V+LINRLPT VL P E LF KPN+ L+VFGC C
Sbjct: 830 GLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLC 889
Query: 306 YPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA---- 365
+P+LRPY HKL RS+PCTFLGYS+ HKGYKCL GR+FISR V+FDE FP+A
Sbjct: 890 FPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQ 949
Query: 366 ---SFASHSS-----IPKSNNV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVFD 425
SHS+ IP N+ LS P S S ++ N D R
Sbjct: 950 KPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLS 1009
Query: 426 NTDH------LNPTI-------------VYPLETGTQESPRDDGNSGGITQSPSP----- 485
NTD LN + PL T + E P + N+ +T P
Sbjct: 1010 NTDSSSTVPILNESASIPSSSNLYALPGTIPLSTNSDE-PNESINTRPVTFPQQPHHMVT 1069
Query: 486 -----------------MEPLHQTDSAFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQK 545
+E + A +HP WK+ M+EEF AL KN TWSL N+
Sbjct: 1070 RSKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRT 1129
Query: 546 IVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIM 605
VGC+WVFK+KRN DGS+SRYKARLVAKG+ Q P D+ ETFSPVVKP TIR+ L IA+
Sbjct: 1130 SVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVS 1189
Query: 606 KGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSS--YPMVCHLKKALYGLKQAPRAWY 665
+ W IRQLDVNNAFL+G L E VYM QP GF+ K++ +VC L KALYGLKQAPRAW+
Sbjct: 1190 QSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWF 1249
Query: 666 EKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQ 725
+KL SL GF ++K+D SL + T +VL+ VDD+++ SS ++++ L+ L
Sbjct: 1250 DKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGL 1309
Query: 726 FALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSA 785
F+LKDLG+LSYFLG+E DLL++TKM AK + TPM+SG LSA
Sbjct: 1310 FSLKDLGELSYFLGIE------------------DLLKKTKMDGAKSLPTPMLSGLKLSA 1369
Query: 786 FQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKG 845
G+P +V YRSVVGALQY T+T PEI++SVNK CQFM P THW+ VKRILRYL G
Sbjct: 1370 GMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNG 1429
Query: 846 VLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSS 905
G+ + S+ M+LVGF DADW SD DDR+STSG CV+ G +LV W SKK SRSS
Sbjct: 1430 TTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSS 1489
Query: 906 TEAEYRCLALLATELVWICSLLNDLYIDLPFPPILWCDNLSAVHLSANPILHSKTKCVEF 932
TEAEYR LA L +E++W+ SLL++L + P++WCDN+S V LSANP+LHS+TK +E
Sbjct: 1490 TEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMEL 1549
BLAST of Cmc04g0106201 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 730.3 bits (1884), Expect = 2.7e-209
Identity = 416/1054 (39.47%), Postives = 573/1054 (54.36%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSDSNTKSVFNTVVPKSNTPLLDLWHRRL 65
+DL+TG LLQG D LY++ I S + ++K+ ++ WH RL
Sbjct: 424 KDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSS------------WHARL 483
Query: 66 GHPHLPIVKAFLNHIDHSSGTIN---KLNFCEACALGKHHALPFSHSLTLYTHPLQLITC 125
GHP I+ + ++ ++S +N K C C + K + +PFS S T PL+ I
Sbjct: 484 GHPAPSILNSVIS--NYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYS 543
Query: 126 DLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEKSLGQSIKS 185
D+W + +SH+ +RYY+ FVD ++RYTW+Y L KS F FK +E I +
Sbjct: 544 DVWSSPI-LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGT 603
Query: 186 LQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLTLLSQATLPLS 245
+D G EF + QHGI H + P+T + NG+ ERKHRHI+E GLTLLS A++P +
Sbjct: 604 FYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKT 663
Query: 246 FWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLS 305
+W AF+ +VYLINRLPTP+L SP +KLF PN+ LRVFGC CYP+LRPY HKL
Sbjct: 664 YWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLD 723
Query: 306 LRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSFPYASF-------------- 365
+S C FLGYS + Y CL RL+ISRHV FDEN FP++++
Sbjct: 724 DKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRES 783
Query: 366 ----ASHSSIPKSNNVL-----SPPLHSIIPSS-----LMNHNEDRRHTDTVF------- 425
+ H+++P VL S P H+ P S N + D+ F
Sbjct: 784 SCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSS 843
Query: 426 ---------------------------DNTDHLNPTIVYPLE-----------TGTQESP 485
NT NPT P + + + SP
Sbjct: 844 PEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSP 903
Query: 486 RDDGNSGGITQSP-----SPMEPLHQ---------------------------------- 545
+S + +P P PL Q
Sbjct: 904 TTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAV 963
Query: 546 ----------TDSAFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQ-KIVGCKWVFKIKR 605
A W+ M E A N TW L P P+ IVGC+W+F K
Sbjct: 964 SLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKY 1023
Query: 606 NSDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNN 665
NSDGS++RYKARLVAKG++Q P +DY ETFSPV+K +IR+ L +A+ + W IRQLDVNN
Sbjct: 1024 NSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNN 1083
Query: 666 AFLHGNLDENVYMKQPFGFEVKSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRT 725
AFL G L ++VYM QP GF K VC L+KALYGLKQAPRAWY +L + L ++GF
Sbjct: 1084 AFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVN 1143
Query: 726 SKADTSLLIHVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLG 785
S +DTSL + Y+L+ VDD++I + +++ + +L+ +F++KD +L YFLG
Sbjct: 1144 SVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLG 1203
Query: 786 VEVS-YPTNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYR 845
+E PT GL LSQ +YI DLL RT M+ AKP++TPM P LS + G D YR
Sbjct: 1204 IEAKRVPT--GLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYR 1263
Query: 846 SVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDN 905
+VG+LQY T P+ISY+VN+ QFMH P H Q +KRILRYL G HG++ +K +
Sbjct: 1264 GIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNT 1323
Query: 906 MSLVGFADADWASDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLAT 932
+SL ++DADWA D DD ST+G+ VY G++ + W SKK + RSSTEAEYR +A ++
Sbjct: 1324 LSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSS 1383
BLAST of Cmc04g0106201 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 724.2 bits (1868), Expect = 1.9e-207
Identity = 419/1058 (39.60%), Postives = 578/1058 (54.63%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSDSNTKSVFNTVVPKSNTPLLDLWHRRL 65
+DL+TG LLQG D LY++ I + S S+F + K+ WH RL
Sbjct: 403 KDLNTGVPLLQGKTKDELYEWPI---------ASSQAVSMFASPCSKATH---SSWHSRL 462
Query: 66 GHPHLPIVKAFLNHIDHSSGTIN---KLNFCEACALGKHHALPFSHSLTLYTHPLQLITC 125
GHP L I+ + ++ +HS +N KL C C + K H +PFS+S + PL+ I
Sbjct: 463 GHPSLAILNSVIS--NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYS 522
Query: 126 DLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEKSLGQSIKS 185
D+W + +S + +RYY+ FVD ++RYTW+Y L KS F FK+ VE I +
Sbjct: 523 DVWSSPI-LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGT 582
Query: 186 LQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLTLLSQATLPLS 245
L +D G EF + +L QHGI H + P+T + NG+ ERKHRHI+EMGLTLLS A++P +
Sbjct: 583 LYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKT 642
Query: 246 FWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLS 305
+W AFS +VYLINRLPTP+L SP +KLF + PN+ L+VFGC CYP+LRPY HKL
Sbjct: 643 YWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLE 702
Query: 306 LRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSFPYA---------------- 365
+S C F+GYS + Y CL GRL+ SRHV FDE FP++
Sbjct: 703 DKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDS 762
Query: 366 --SFASHSSIPKSNNVLSPP-------------------------LHSIIPSSLM----- 425
++ SH+++P + VL P S +PSS +
Sbjct: 763 APNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSS 822
Query: 426 ------NHNEDR-----RHTDTVFDNTDHLN-----------PTIVYPLETGTQESPRDD 485
+HN + T N+ LN P PL SP
Sbjct: 823 SEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIP 882
Query: 486 GNSGGITQ--SPS-------------PMEPLHQTDS------------------------ 545
S I++ SPS P P+ Q ++
Sbjct: 883 TPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKY 942
Query: 546 -----------------AFNHPHWKKVMEEEFEALQKNGTWSLT-PQNPNQKIVGCKWVF 605
A W++ M E A N TW L P P+ IVGC+W+F
Sbjct: 943 SYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIF 1002
Query: 606 KIKRNSDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQL 665
K NSDGS++RYKARLVAKG++Q P +DY ETFSPV+K +IR+ L +A+ + W IRQL
Sbjct: 1003 TKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1062
Query: 666 DVNNAFLHGNLDENVYMKQPFGFEVKSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSL 725
DVNNAFL G L + VYM QP GF K VC L+KA+YGLKQAPRAWY +L + L ++
Sbjct: 1063 DVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTV 1122
Query: 726 GFRTSKADTSLLIHVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLS 785
GF S +DTSL + Y+L+ VDD++I + + + +L+ +F++K+ L
Sbjct: 1123 GFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLH 1182
Query: 786 YFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVH 845
YFLG+E GL LSQ +Y DLL RT ML AKP++TPM + P L+ G D
Sbjct: 1183 YFLGIEAKRVPQ-GLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1242
Query: 846 LYRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRK 905
YR +VG+LQY T P++SY+VN+ Q+MH P HW +KR+LRYL G HG++ +K
Sbjct: 1243 EYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1302
Query: 906 SDNMSLVGFADADWASDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLAL 933
+ +SL ++DADWA D DD ST+G+ VY G++ + W SKK + RSSTEAEYR +A
Sbjct: 1303 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1362
BLAST of Cmc04g0106201 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 493.4 bits (1269), Expect = 5.6e-138
Identity = 319/910 (35.05%), Postives = 470/910 (51.65%), Query Frame = 0
Query: 58 LDLWHRRLGH---PHLPIVKAFLNHIDHSSGTINKLNFCEACALGKHHALPFSHSLTLYT 117
+DLWH+R+GH L I+ A + I ++ GT K C+ C GK H + F S
Sbjct: 422 VDLWHKRMGHMSEKGLQIL-AKKSLISYAKGTTVKP--CDYCLFGKQHRVSFQTSSERKL 481
Query: 118 HPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEK 177
+ L L+ D+ GP S G +Y+++F+D SR W+Y L K F FQKF VE+
Sbjct: 482 NILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVER 541
Query: 178 SLGQSIKSLQTDGGTEF--KPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLT 237
G+ +K L++D G E+ + F+ + HGI H T P T + NG+ ER +R I+E +
Sbjct: 542 ETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRS 601
Query: 238 LLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPY 297
+L A LP SFW EA T+ YLINR P+ L P ++ ++ L+VFGC+ + +
Sbjct: 602 MLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAH 661
Query: 298 LRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFI-SRHVLFDENSFPYASFASHS 357
+ Q KL +S PC F+GY GY+ + I SR V+F E+ A+
Sbjct: 662 VPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE---VRTAADM 721
Query: 358 SIPKSNNVLSPPLHSIIPSSLMNHNEDRRHTDTVFDNTDHLNPTI---------VYPLET 417
S N ++ P IPS+ N TD V + + I V +E
Sbjct: 722 SEKVKNGII--PNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEH 781
Query: 418 GTQ-----------ESPRDDGNSGGITQ---SPSPMEPLHQTDSAFNHP---HWKKVMEE 477
TQ E PR + T+ EP +HP K M+E
Sbjct: 782 PTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREP-ESLKEVLSHPEKNQLMKAMQE 841
Query: 478 EFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNIDYN 537
E E+LQKNGT+ L ++ + CKWVFK+K++ D + RYKARLV KGF Q ID++
Sbjct: 842 EMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFD 901
Query: 538 ETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSSYPM 597
E FSPVVK +IR L++A + QLDV AFLHG+L+E +YM+QP GFEV M
Sbjct: 902 EIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHM 961
Query: 598 VCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLI-HVTPTPCCYVLICVDDL 657
VC L K+LYGLKQAPR WY K S + S + + +D + + +L+ VDD+
Sbjct: 962 VCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDM 1021
Query: 658 IIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVE-VSYPTNGGLFLSQSKYITDLLQR 717
+I+ + + L L+ F +KDLG LG++ V T+ L+LSQ KYI +L+R
Sbjct: 1022 LIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLER 1081
Query: 718 TKMLEAKPISTPMVSGPLLS------AFQGEPFHDVHLYRSVVGALQYATL-THPEISYS 777
M AKP+STP+ LS + + Y S VG+L YA + T P+I+++
Sbjct: 1082 FNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHA 1141
Query: 778 VNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDDRK 837
V +F+ P HW+ VK ILRYL+G L F SD + L G+ DAD A D D+RK
Sbjct: 1142 VGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRK 1201
Query: 838 STSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDLYIDLPFP 897
S++G+ F + W SK ++ S+TEAEY E++W+ L +L +
Sbjct: 1202 SSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK-E 1261
Query: 898 PILWCDNLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQIADILTKP 927
+++CD+ SA+ LS N + H++TK ++ +++R+++ L + + E AD+LTK
Sbjct: 1262 YVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKV 1320
BLAST of Cmc04g0106201 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-112
Identity = 291/992 (29.33%), Postives = 446/992 (44.96%), Query Frame = 0
Query: 60 LWHRRLGH-PHLPIVKAFLNHIDHSSGTINKL----NFCEACALGKHHALPFSH--SLTL 119
LWH R GH +++ ++ +N L CE C GK LPF T
Sbjct: 417 LWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTH 476
Query: 120 YTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCV 179
PL ++ D+ GP V+ + Y++ FVD ++ Y Y + +KSD F FQ F
Sbjct: 477 IKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKS 536
Query: 180 EKSLGQSIKSLQTDGGTEF--KPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMG 239
E + L D G E+ + F + GI + +T P+T + NG+ ER R I E
Sbjct: 537 EAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKA 596
Query: 240 LTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNIS--PLEKLFCRKPNFPSLRVFGCK 299
T++S A L SFW EA T+ YLINR+P+ L + S P E +KP LRVFG
Sbjct: 597 RTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGAT 656
Query: 300 CYPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCL-ASDGRLFISRHVLFDENSF----- 359
Y +++ Q K +S F+GY + G+K A + + ++R V+ DE +
Sbjct: 657 VYVHIKNKQG-KFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSRA 716
Query: 360 -PYASFASHSSIPKSNNVLSPPLHSIIPSSLMNH----------------------NEDR 419
+ + S N II + N N+ R
Sbjct: 717 VKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSR 776
Query: 420 RHTDTVFDN------------------------------TDHLN--------------PT 479
+ T F N DHLN T
Sbjct: 777 KIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESET 836
Query: 480 IVYPLETGTQESPRDDG----NSGGITQSPSPMEPLHQTDSAFN---------------- 539
+ E G ++DG N P ++ D++ N
Sbjct: 837 AEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNS 896
Query: 540 ---------HPHWKKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISR 599
W++ + E A + N TW++T + N+ IV +WVF +K N G+ R
Sbjct: 897 FDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIR 956
Query: 600 YKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLD 659
YKARLVA+GF Q IDY ETF+PV + + R L++ I + Q+DV AFL+G L
Sbjct: 957 YKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLK 1016
Query: 660 ENVYMKQPFGFEVKSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLL 719
E +YM+ P G S VC L KA+YGLKQA R W+E +L F S D +
Sbjct: 1017 EEIYMRLPQGISCNSD--NVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIY 1076
Query: 720 I--HVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYP 779
I YVL+ VDD++I +N+ L +F + DL ++ +F+G+ +
Sbjct: 1077 ILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQ 1136
Query: 780 TNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQ 839
+ ++LSQS Y+ +L + M +STP+ S + + RS++G L
Sbjct: 1137 ED-KIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC-RSLIGCLM 1196
Query: 840 YATL-THPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRK--SDNMSLV 899
Y L T P+++ +VN ++ WQ +KR+LRYLKG + L F+K + ++
Sbjct: 1197 YIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKII 1256
Query: 900 GFADADWASDPDDRKSTSGFCV-YFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELV 933
G+ D+DWA DRKST+G+ F NL+ W +K+ + ++ SSTEAEY L E +
Sbjct: 1257 GYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREAL 1316
BLAST of Cmc04g0106201 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 2.3e-54
Identity = 105/227 (46.26%), Postives = 153/227 (67.40%), Query Frame = 0
Query: 616 YVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEV-SYPTNGGLFLSQS 675
Y+L+ VDD+++ SS +N L+ L+S F++KDLG + YFLG+++ ++P+ GLFLSQ+
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQT 61
Query: 676 KYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEIS 735
KY +L ML+ KP+STP+ L S+ + D +RS+VGALQY TLT P+IS
Sbjct: 62 KYAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 121
Query: 736 YSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDD 795
Y+VN CQ MH P + L+KR+LRY+KG ++HGL+ K+ +++ F D+DWA
Sbjct: 122 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 181
Query: 796 RKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVW 842
R+ST+GFC + G N++ W +K+ +SRSSTE EYR LAL A EL W
Sbjct: 182 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc04g0106201 vs. ExPASy TrEMBL
Match:
A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)
HSP 1 Score: 940.3 bits (2429), Expect = 6.4e-270
Identity = 503/1007 (49.95%), Postives = 636/1007 (63.16%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPS--HKRLHHSDSNTKSVF-----------NTVVPK 65
+D +LLQG L+ GLY+F + K S SN K+ N+ P+
Sbjct: 454 KDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPE 513
Query: 66 ---SNTPLLDLWHRRLGHPHLPIVKAFLNHIDHSSGTINKLNFCEACALGKHHALPFSHS 125
S+ + DLWH+RLGHP IV LN T + + C AC LGK H LPF S
Sbjct: 514 KTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPIS 573
Query: 126 LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFK 185
T+YT PLQL+ DLWGPA S GF YY+SFVDAYSRYTW+YFL KS AF FK
Sbjct: 574 QTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFK 633
Query: 186 TCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEM 245
E G +K+ QTD G EF+ K + +Q+GI HR++CP+TSKQNGI+ERKHRHI+E+
Sbjct: 634 AQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVEL 693
Query: 246 GLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKC 305
GLTLL+QA+LPL +W +AFST+V+LINRLPT VL P E LF KPN+ L+VFGC C
Sbjct: 694 GLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLC 753
Query: 306 YPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA---- 365
+P+LRPY HKL RS+PCTFLGYS+ HKGYKCL GR+FISR V+FDE FP+A
Sbjct: 754 FPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQ 813
Query: 366 ---SFASHSS-----IPKSNNV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVFD 425
SHS+ IP N+ LS P S S ++ N D R
Sbjct: 814 KPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLS 873
Query: 426 NTDH------LNPTI-------------VYPLETGTQESPRDDGNSGGITQSPSP----- 485
NTD LN + PL T + E P + N+ +T P
Sbjct: 874 NTDSSSTVPILNESASIPSSSNLYALPGTIPLSTNSDE-PNESINTRPVTFPQQPHHMVT 933
Query: 486 -----------------MEPLHQTDSAFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQK 545
+E + A +HP WK+ M+EEF AL KN TWSL N+
Sbjct: 934 RSKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRT 993
Query: 546 IVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIM 605
VGC+WVFK+KRN DGS+SRYKARLVAKG+ Q P D+ ETFSPVVKP TIR+ L IA+
Sbjct: 994 SVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVS 1053
Query: 606 KGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSS--YPMVCHLKKALYGLKQAPRAWY 665
+ W IRQLDVNNAFL+G L E VYM QP GF+ K++ +VC L KALYGLKQAPRAW+
Sbjct: 1054 QSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWF 1113
Query: 666 EKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQ 725
+KL SL GF ++K+D SL + T +VL+ VDD+++ SS ++++ L+ L
Sbjct: 1114 DKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGL 1173
Query: 726 FALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSA 785
F+LKDLG+LSYFLG+EV +GGL LSQ KYI DLL++TKM AK + TPM+SG LSA
Sbjct: 1174 FSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSA 1233
Query: 786 FQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKG 845
G+P +V YRSVVGALQY T+T PEI++SVNK CQFM P THW+ VKRILRYL G
Sbjct: 1234 GMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNG 1293
Query: 846 VLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSS 905
G+ + S+ M+LVGF DADW SD DDR+STSG CV+ G +LV W SKK SRSS
Sbjct: 1294 TTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSS 1353
Query: 906 TEAEYRCLALLATELVWICSLLNDLYIDLPFPPILWCDNLSAVHLSANPILHSKTKCVEF 932
TEAEYR LA L +E++W+ SLL++L + P++WCDN+S V LSANP+LHS+TK +E
Sbjct: 1354 TEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMEL 1413
BLAST of Cmc04g0106201 vs. ExPASy TrEMBL
Match:
A5BFT3 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_017741 PE=4 SV=1)
HSP 1 Score: 926.8 bits (2394), Expect = 7.3e-266
Identity = 480/992 (48.39%), Postives = 645/992 (65.02%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPSHKRLHHSDSNTK-------SVFNTVVPKSNTPLL 65
+D T VL+ G + DGLY F SH L + S +K S + V S +
Sbjct: 464 KDQVTQAVLMVGKVRDGLYAF--DSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTF 523
Query: 66 DLWHRRLGHPHLPIVKAFLNHIDHSSGTINKL--NFCEACALGKHHALPFSHSLTLYTHP 125
DLWH+RLGHP +K L+ + + INK+ NFC +C LGK H PFS S T YT P
Sbjct: 524 DLWHKRLGHPSAATIKNVLSKCNVAH--INKMDSNFCSSCCLGKIHRFPFSLSHTTYTKP 583
Query: 126 LQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEKSL 185
L+LI DLWGP + +S++G+RYYI FVDA+SR++WI+ L KS+A F FKT VE
Sbjct: 584 LELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQF 643
Query: 186 GQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLTLLSQ 245
IKSLQTD G EF+ F+ +L ++GI HR++CP+T +QNG+ ERKHR I+E GLTLL
Sbjct: 644 DLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHT 703
Query: 246 ATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPY 305
A+LPL FWDE+F T VYL NRLPT +L + P+E LF P++ L+VFGC C+P LRPY
Sbjct: 704 ASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPY 763
Query: 306 QSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS---------- 365
+HKL RS CTFLGYS HKGYKC++S+GR++IS V+F+E SFPY+
Sbjct: 764 NTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLS 823
Query: 366 ----FASHSSIPKSNNVLSP--------PLHSIIPSSLMN-----HNEDRRHTDTVFDNT 425
SH S S VLSP P+ S P S M+ H DT
Sbjct: 824 TVSPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVSTHPHAPNSADTTLTPA 883
Query: 426 DHLNPTIVYPLE---------TGTQESPRDDGNS--------GGITQSPSPMEPLHQTDS 485
++ + P++ + T+ +D N+ GI + + + + S
Sbjct: 884 QVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAIREPSS 943
Query: 486 ---AFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKA 545
A WKK M E++ALQ+N TWSL P ++ +GCKWV+K K N DG++ +YKA
Sbjct: 944 VSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKA 1003
Query: 546 RLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENV 605
RLVAKGFHQ D+ ETFSPVVKP T+R+ TIA+ + W+I+QLDVNNAFL+G+L E V
Sbjct: 1004 RLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEV 1063
Query: 606 YMKQPFGFEVKSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHV 665
+M+QP GF + + +VC L KALYGLKQAPRAW+EKL +L S GF ++K+D SL +
Sbjct: 1064 FMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRF 1123
Query: 666 TPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGL 725
TP YVL+ VDD++++ S + SL+ LNS+F+LKDLG++ YFLG++VS+ TN GL
Sbjct: 1124 TPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSH-TNNGL 1183
Query: 726 FLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLT 785
LSQ+KYI DLLQ+TKM+ KP TP+ +G L G+P D+H YRS VGALQY T+T
Sbjct: 1184 HLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTIT 1243
Query: 786 HPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWA 845
PE+S+SVNK CQFM P HW++VKRILRYL+G L HGL +KS N+ L+GF DADWA
Sbjct: 1244 RPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWA 1303
Query: 846 SDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDL 905
SD DDR+STSG CV+ G NL+ W SKK I+SRSS E EYR LA L E+ W+ SLL++L
Sbjct: 1304 SDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSEL 1363
Query: 906 YIDLPFPPILWCDNLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQI 942
+ L PP++WCDNLS V LSANP+LH++TK +E D+YFVR+ + + ++ +RH+P+ +Q+
Sbjct: 1364 QLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVPSADQL 1423
BLAST of Cmc04g0106201 vs. ExPASy TrEMBL
Match:
A0A438K147 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2516 PE=4 SV=1)
HSP 1 Score: 921.4 bits (2380), Expect = 3.1e-264
Identity = 481/982 (48.98%), Postives = 640/982 (65.17%), Query Frame = 0
Query: 17 GLLNDGLYKFTIQPSHKRLHHSDSNTK-------SVFNTVVPKSNTPLLDLWHRRLGHPH 76
G + DGLY F SH L + S +K S + V S + DLWH+RLG P
Sbjct: 432 GKVRDGLYAF--DSSHLALRPTQSLSKSPSVVASSFSSKVCIASLSSTFDLWHKRLGQPS 491
Query: 77 LPIVKAFLNHIDHSSGTINKL--NFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGP 136
+K L+ + + INK+ NFC +C LGK H PFS S T YT PL+LI DLWGP
Sbjct: 492 AATIKNVLSKCNVAH--INKMDSNFCSSCCLGKIHMFPFSLSHTTYTKPLELIHSDLWGP 551
Query: 137 AVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFKTCVEKSLGQSIKSLQTDG 196
A +S++G+RYYI FVDA+SR++WI+ L KS+A F FKT VE IKSLQTD
Sbjct: 552 APVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDW 611
Query: 197 GTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEMGLTLLSQATLPLSFWDEA 256
G EF+ F+ +L ++GI HR++CP+T +QNG+ ERKHR I+E GLTLL +LPL FWDE+
Sbjct: 612 GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTVSLPLKFWDES 671
Query: 257 FSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKCYPYLRPYQSHKLSLRSTP 316
F T VYL NRLPT VL + P+E LF P++ L+VFGC C+P LRPY +HKL RS
Sbjct: 672 FRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEE 731
Query: 317 CTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYAS--------------FASHSSI 376
CTFLGYS HKGYKC++S+GR++ISR V+F+E SFPY+ SH S
Sbjct: 732 CTFLGYSLKHKGYKCMSSNGRVYISRDVIFNETSFPYSKTIQVSSCLPSTVSPSTSHLSP 791
Query: 377 PKSNNVLSP--------PLHSIIPSSLMN-----HNEDRRHTDTVFDNTDHLNPTIVYPL 436
S VLSP P+ S P S M+ H DT ++ + P+
Sbjct: 792 SASPPVLSPTMLPAPTSPISSARPISEMDNIVSTHPHAPNSADTTLTPAQVVSNPVATPV 851
Query: 437 E---------TGTQESPRD-DGNSGGITQSPSPM-----------EPLHQTDSAFNHPHW 496
+ + T+ +D D IT++ S + EP +A W
Sbjct: 852 QHVVSSIADASVTRTIAKDADNTHPMITRAKSGIVKPKIFIAAVREP-SSVSAALQQDEW 911
Query: 497 KKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLVAKGFHQT 556
KK M E++ALQ+N TWSL P ++ +GCKWV+K K N DG++ +YKARLVAKGFHQ
Sbjct: 912 KKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQ 971
Query: 557 PNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEV 616
D+ ETFSPVVKP TIR+ TIA+ + W+I+QLDVNNAFL+G+L E V+M+QP GF
Sbjct: 972 AGFDFTETFSPVVKPSTIRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFID 1031
Query: 617 KSSYPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLI 676
+ + +VC L KALYGLKQAPRAW+EKL +L S GF ++K+D SL + TP+ YVL+
Sbjct: 1032 EKNPNLVCRLHKALYGLKQAPRAWFEKLHQALLSFGFVSAKSDQSLFLRFTPSHITYVLV 1091
Query: 677 CVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITD 736
VDD++++ S + SL+ LNS+F+LKDLG++ YFLG++VS+ TN GL LSQ+KYI D
Sbjct: 1092 YVDDILVIGSDTTTITSLIAQLNSEFSLKDLGEVHYFLGIQVSH-TNNGLHLSQTKYIRD 1151
Query: 737 LLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNK 796
LLQ+TKM+ KP TP+ +G L A G+P D+H YRS VGALQY T+T PE+S+SVNK
Sbjct: 1152 LLQKTKMVHCKPARTPLPTGLKLRAGDGDPVDDLHGYRSTVGALQYVTITRPELSFSVNK 1211
Query: 797 ACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTS 856
CQFM P HW+ VKRILRYL+G L HGL +KS N+ L+GF DADWASD DDR+STS
Sbjct: 1212 VCQFMQNPTEEHWKAVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTS 1271
Query: 857 GFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDLYIDLPFPPIL 916
G CV+ G NL+ W SKK +SRSSTEAEYR LA L E+ W+ SLL++L + L PP++
Sbjct: 1272 GHCVFLGPNLISWQSKKQHTVSRSSTEAEYRSLAGLVAEITWLRSLLSELQLPLAKPPLV 1331
Query: 917 WCDNLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQIADILTKPLSA 942
WCDNLS V LSANP+LH++TK +E D+YFV + + + ++ +RH+P+ +Q+AD+LTK +S+
Sbjct: 1332 WCDNLSTVLLSANPVLHARTKHIELDLYFVHEKVIRKEVEVRHVPSADQLADVLTKTVSS 1391
BLAST of Cmc04g0106201 vs. ExPASy TrEMBL
Match:
A0A5A7UFS3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00520 PE=4 SV=1)
HSP 1 Score: 919.1 bits (2374), Expect = 1.5e-263
Identity = 455/499 (91.18%), Postives = 464/499 (92.99%), Query Frame = 0
Query: 443 MEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNI 502
MEEEFEALQKN TW LTPQNPNQKIVGCKWVFKIKRNS G I+RYKARLVAKGFHQTPNI
Sbjct: 1 MEEEFEALQKNDTWRLTPQNPNQKIVGCKWVFKIKRNSYGPIARYKARLVAKGFHQTPNI 60
Query: 503 DYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSS 562
DYNETFSPVVK +TI M LTIAIMKGWSIRQLDVNNAFLHGNLDENVYM+Q FGFEVKSS
Sbjct: 61 DYNETFSPVVKSITICMLLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMEQIFGFEVKSS 120
Query: 563 YPMVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLICVD 622
YPMVCHLKKALYGLKQAPRAWYE LS LHSLGFRTSKADTSLLI VTPT CCY LI VD
Sbjct: 121 YPMVCHLKKALYGLKQAPRAWYENLSLGLHSLGFRTSKADTSLLIRVTPTSCCYALIYVD 180
Query: 623 DLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQ 682
DLIIM SS+KDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNG LFLSQSKYITDLLQ
Sbjct: 181 DLIIMGSSKKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGDLFLSQSKYITDLLQ 240
Query: 683 RTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNKACQ 742
RTKML+AKPISTPMVSGPLLSAFQGEPFHDVHL RSVVGALQYATLTHPEISYSVNKACQ
Sbjct: 241 RTKMLDAKPISTPMVSGPLLSAFQGEPFHDVHLLRSVVGALQYATLTHPEISYSVNKACQ 300
Query: 743 FMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFC 802
FMHTPKHTHWQLVKRILRYLKGVLYHGLW KSDN SLVGFADADWASDPDDRKSTSG C
Sbjct: 301 FMHTPKHTHWQLVKRILRYLKGVLYHGLWLSKSDNTSLVGFADADWASDPDDRKSTSGLC 360
Query: 803 VYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDLYIDLPFPPILWCD 862
VYFGNNLV WGSKK SIISRSSTEAEYRCLALLATE+VWI SLLNDLYIDLPFPPIL CD
Sbjct: 361 VYFGNNLVSWGSKKQSIISRSSTEAEYRCLALLATEMVWIRSLLNDLYIDLPFPPILCCD 420
Query: 863 NLSAVHLSANPILHSKTKCVEFDIYFVRDLIQKGKLAIRHLPATEQIADILTKPLSAQSF 922
NLSAVH SANPILHSKTK VE DIYFVRDLI+K KL +RHLPATEQIADILTKPLSAQSF
Sbjct: 421 NLSAVHFSANPILHSKTKHVELDIYFVRDLIRKEKLFVRHLPATEQIADILTKPLSAQSF 480
Query: 923 HTLKNKLTVIDSTTIGLQG 942
H LKN +TVIDS IGLQG
Sbjct: 481 HKLKNNITVIDSAVIGLQG 499
BLAST of Cmc04g0106201 vs. ExPASy TrEMBL
Match:
A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)
HSP 1 Score: 911.4 bits (2354), Expect = 3.2e-261
Identity = 493/1007 (48.96%), Postives = 625/1007 (62.07%), Query Frame = 0
Query: 6 QDLDTGQVLLQGLLNDGLYKFTIQPS--HKRLHHSDSNTKSVF-----------NTVVPK 65
+D +LLQG L+ GLY+F + K S SN K+ N+ P+
Sbjct: 590 KDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPE 649
Query: 66 ---SNTPLLDLWHRRLGHPHLPIVKAFLNHIDHSSGTINKLNFCEACALGKHHALPFSHS 125
S+ + DLWH+RLGHP IV LN T + + C AC LGK H LPF S
Sbjct: 650 KTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKSHNLPFPIS 709
Query: 126 LTLYTHPLQLITCDLWGPAVNVSHNGFRYYISFVDAYSRYTWIYFLNFKSDAFLAFQKFK 185
T+YT PLQL+ DLWGPA S GF YY+SFVDAYSRYTW+YFL KS AF FK
Sbjct: 710 QTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQTREAFLMFK 769
Query: 186 TCVEKSLGQSIKSLQTDGGTEFKPFKPFLDQHGIEHRITCPYTSKQNGIVERKHRHIMEM 245
E G +K+ QTD G EF+ K + +Q+GI HR++CP+TSKQNGI+ERKHRHI+E+
Sbjct: 770 AQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVEL 829
Query: 246 GLTLLSQATLPLSFWDEAFSTSVYLINRLPTPVLDNISPLEKLFCRKPNFPSLRVFGCKC 305
GLTLL+QA+LPL +W +AFST+V+LINRLPT VL P E LF KPN+ L+VFGC C
Sbjct: 830 GLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLC 889
Query: 306 YPYLRPYQSHKLSLRSTPCTFLGYSTSHKGYKCLASDGRLFISRHVLFDENSFPYA---- 365
+P+LRPY HKL RS+PCTFLGYS+ HKGYKCL GR+FISR V+FDE FP+A
Sbjct: 890 FPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQ 949
Query: 366 ---SFASHSS-----IPKSNNV--------LSPPLHSIIPSSLMNHN--EDRRHTDTVFD 425
SHS+ IP N+ LS P S S ++ N D R
Sbjct: 950 KPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENLGSDIRSVQQDLS 1009
Query: 426 NTDH------LNPTI-------------VYPLETGTQESPRDDGNSGGITQSPSP----- 485
NTD LN + PL T + E P + N+ +T P
Sbjct: 1010 NTDSSSTVPILNESASIPSSSNLYALPGTIPLSTNSDE-PNESINTRPVTFPQQPHHMVT 1069
Query: 486 -----------------MEPLHQTDSAFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQK 545
+E + A +HP WK+ M+EEF AL KN TWSL N+
Sbjct: 1070 RSKNGIFKPKVYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRT 1129
Query: 546 IVGCKWVFKIKRNSDGSISRYKARLVAKGFHQTPNIDYNETFSPVVKPVTIRMHLTIAIM 605
VGC+WVFK+KRN DGS+SRYKARLVAKG+ Q P D+ ETFSPVVKP TIR+ L IA+
Sbjct: 1130 SVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVS 1189
Query: 606 KGWSIRQLDVNNAFLHGNLDENVYMKQPFGFEVKSS--YPMVCHLKKALYGLKQAPRAWY 665
+ W IRQLDVNNAFL+G L E VYM QP GF+ K++ +VC L KALYGLKQAPRAW+
Sbjct: 1190 QSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWF 1249
Query: 666 EKLSSSLHSLGFRTSKADTSLLIHVTPTPCCYVLICVDDLIIMDSSEKDVNSLVHSLNSQ 725
+KL SL GF ++K+D SL + T +VL+ VDD+++ SS ++++ L+ L
Sbjct: 1250 DKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGL 1309
Query: 726 FALKDLGKLSYFLGVEVSYPTNGGLFLSQSKYITDLLQRTKMLEAKPISTPMVSGPLLSA 785
F+LKDLG+LSYFLG+E DLL++TKM AK + TPM+SG LSA
Sbjct: 1310 FSLKDLGELSYFLGIE------------------DLLKKTKMDGAKSLPTPMLSGLKLSA 1369
Query: 786 FQGEPFHDVHLYRSVVGALQYATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKG 845
G+P +V YRSVVGALQY T+T PEI++SVNK CQFM P THW+ VKRILRYL G
Sbjct: 1370 GMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNG 1429
Query: 846 VLYHGLWFRKSDNMSLVGFADADWASDPDDRKSTSGFCVYFGNNLVPWGSKKHSIISRSS 905
G+ + S+ M+LVGF DADW SD DDR+STSG CV+ G +LV W SKK SRSS
Sbjct: 1430 TTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSS 1489
Query: 906 TEAEYRCLALLATELVWICSLLNDLYIDLPFPPILWCDNLSAVHLSANPILHSKTKCVEF 932
TEAEYR LA L +E++W+ SLL++L + P++WCDN+S V LSANP+LHS+TK +E
Sbjct: 1490 TEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMEL 1549
BLAST of Cmc04g0106201 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 392.9 bits (1008), Expect = 7.3e-109
Identity = 195/457 (42.67%), Postives = 286/457 (62.58%), Query Frame = 0
Query: 439 WKKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLVAKGFHQ 498
W M++E A++ TW + PN+K +GCKWV+KIK NSDG+I RYKARLVAKG+ Q
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 499 TPNIDYNETFSPVVKPVTIRMHLTIAIMKGWSIRQLDVNNAFLHGNLDENVYMKQPFGFE 558
ID+ ETFSPV K ++++ L I+ + +++ QLD++NAFL+G+LDE +YMK P G+
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 559 VK--SSYP--MVCHLKKALYGLKQAPRAWYEKLSSSLHSLGFRTSKADTSLLIHVTPTPC 618
+ S P VC+LKK++YGLKQA R W+ K S +L GF S +D + + +T T
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277
Query: 619 CYVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEVSYPTNGGLFLSQS 678
VL+ VDD+II +++ V+ L L S F L+DLG L YFLG+E++ + G+ + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA-RSAAGINICQR 337
Query: 679 KYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEIS 738
KY DLL T +L KP S PM SA G F D YR ++G L Y +T +IS
Sbjct: 338 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDIS 397
Query: 739 YSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDD 798
++VNK QF P+ H Q V +IL Y+KG + GL++ M L F+DA + S D
Sbjct: 398 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDT 457
Query: 799 RKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVWICSLLNDLYIDLP 858
R+ST+G+C++ G +L+ W SKK ++S+SS EAEYR L+ E++W+ +L + L
Sbjct: 458 RRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLS 517
Query: 859 FPPILWCDNLSAVHLSANPILHSKTKCVEFDIYFVRD 892
P +L+CDN +A+H++ N + H +TK +E D + VR+
Sbjct: 518 KPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
BLAST of Cmc04g0106201 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 215.7 bits (548), Expect = 1.6e-55
Identity = 105/227 (46.26%), Postives = 153/227 (67.40%), Query Frame = 0
Query: 616 YVLICVDDLIIMDSSEKDVNSLVHSLNSQFALKDLGKLSYFLGVEV-SYPTNGGLFLSQS 675
Y+L+ VDD+++ SS +N L+ L+S F++KDLG + YFLG+++ ++P+ GLFLSQ+
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQT 61
Query: 676 KYITDLLQRTKMLEAKPISTPMVSGPLLSAFQGEPFHDVHLYRSVVGALQYATLTHPEIS 735
KY +L ML+ KP+STP+ L S+ + D +RS+VGALQY TLT P+IS
Sbjct: 62 KYAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 121
Query: 736 YSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFADADWASDPDD 795
Y+VN CQ MH P + L+KR+LRY+KG ++HGL+ K+ +++ F D+DWA
Sbjct: 122 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 181
Query: 796 RKSTSGFCVYFGNNLVPWGSKKHSIISRSSTEAEYRCLALLATELVW 842
R+ST+GFC + G N++ W +K+ +SRSSTE EYR LAL A EL W
Sbjct: 182 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc04g0106201 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 108.6 bits (270), Expect = 2.8e-23
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 0
Query: 433 AFNHPHWKKVMEEEFEALQKNGTWSLTPQNPNQKIVGCKWVFKIKRNSDGSISRYKARLV 492
A P W + M+EE +AL +N TW L P NQ I+GCKWVFK K +SDG++ R KARLV
Sbjct: 34 ALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93
Query: 493 AKGFHQTPNIDYNETFSPVVKPVTIRMHLTIA 525
AKGFHQ I + ET+SPVV+ TIR L +A
Sbjct: 94 AKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of Cmc04g0106201 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 78.6 bits (192), Expect = 3.1e-14
Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 725 YATLTHPEISYSVNKACQFMHTPKHTHWQLVKRILRYLKGVLYHGLWFRKSDNMSLVGFA 784
Y T+T P+++++VN+ QF + Q V ++L Y+KG + GL++ + ++ L FA
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 785 DADWASDPDDRKSTSGFCVYFGNNLVP-W--GSKKHSIIS 822
D+DWAS PD R+S +GFC +LVP W G+ + SI+S
Sbjct: 62 DSDWASCPDTRRSVTGFC-----SLVPLWFLGALRKSILS 96
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW44519.1 | 1.3e-269 | 49.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
CAN81099.1 | 1.5e-265 | 48.39 | hypothetical protein VITISV_017741 [Vitis vinifera] | [more] |
RVX14937.1 | 6.3e-264 | 48.98 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
KAA0052371.1 | 3.1e-263 | 91.18 | putative mitochondrial protein [Cucumis melo var. makuwa] >TYK09417.1 putative m... | [more] |
RVW60229.1 | 6.6e-261 | 48.96 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 2.7e-209 | 39.47 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.9e-207 | 39.60 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 5.6e-138 | 35.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 1.8e-112 | 29.33 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P92519 | 2.3e-54 | 46.26 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A438EA49 | 6.4e-270 | 49.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A5BFT3 | 7.3e-266 | 48.39 | Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... | [more] |
A0A438K147 | 3.1e-264 | 48.98 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A5A7UFS3 | 1.5e-263 | 91.18 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A438FJP6 | 3.2e-261 | 48.96 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 7.3e-109 | 42.67 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 1.6e-55 | 46.26 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00820.1 | 2.8e-23 | 55.43 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00240.1 | 3.1e-14 | 39.00 | Gag-Pol-related retrotransposon family protein | [more] |