
Cmc04g0105981 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTAATGCTAAATGTACATTGTTTTTCACAACACGAAGTTTTTGTTATTGTGCAAGAACATGGGGTATCTAAGCATGAAATGTTTACCAGTTTGGTTGTTTTTGTTGGCAACAACAAGTTTGGTCGAAAAAGGCAAAGGGGAAACTTGTAGTTTCACCTTCTTCTCTTCCCTTGCTAGGTTGATGCCTTGTAGGCCATCGGTCGCTCCATTCCGGCCCATCCCGCCGACCGTGGCCTGTTGCAATGCAGTCAAAACTCTTGGCCAGCCTTGCTTGTGTGTGCTTGTCAATGGCCCCCCTATTACCGGCGTTGATCGTGAGTTGGCCATGCTGTTGCCGCAGAAGTGCACTGCCGATTTTGATCCATGTACACTCTCTCAATCTCTTTCCTAATTATTTGTGTTTTTGTTTACGAATTCAAGAAATGAGATTAAAAAGAAAAGACTCTTTTTAAATATAGGTAAATGAACCAAAATATTTCGAAATATAAAGAAGTTTTAAAATTTATCAATGATAGACTTTGATAGATTCTATCAATAATGTTCTAGAATGTTGCTATATTTGTAAATATTTTTAGCTGTTTTGTCATTTGAAATAATTTTTCTTAAAAACAACTACAAAATGTAAGGTAATAACATCAATTGGGTTTACTCAACAGTAACCGAATTCTCTCGCCACGATAGTTAAAATAAAAAGGAAAAAGCTCCATTTTGTTTTTTATTTTTTGTTTTTAAGAATTAAGCATATTTTTATTGAATTTCTTACGATGATTTGTAACTTTTTGATGTACAAGAGCTTGATTTAAAAATAAAACAAAAATTTTCCTCTCAATGTTTTGATTTGATTTTTGAAAATATTGATAAAAGAAAAGATTGAAAATATATATTGATAACAAAAAAAGATGTTAGCTAAAAGCGAAAAATGGATTGAGTTTTATTTTATGTTTTCAAGTTCACTTCATGAATTGAGTTGAGTGCATATTTCTATGGCAAATTTGTTTTGAAAACTGTTATTGTTTTTGAATGTGTTTCAAAATTATAGATATTTTAAAAACATTTTTAGGTATCCGTCTATCCAAATTTTGAAGGCAAAAAAATACACTAAAAGTAGATAAAATCTTGAGAAATATTTGTATGTTATGTGTTATAAACTAACATAACTTTATTAACTGTAAAATAAGTGCATTACTACATTTTGTTACAGTACTTTTTTTTTTTTGTATAAAATTTATAATATTAAACTTGTTAATAAATAAATTAATGAGAGTTGAGGTCCAATATTGTAATAGTCAATGATTCAATATTGGTTTAAGAAGACTGAAATGTTTTTTTAAAAAAACATATTTAAGACGACTGAAAAGATGAAATACAACTTTGCGTTCCACCAAATCACTTCCAACCCCAAATATTTGTTTTCAAATCACAGACCTATCTCACCCTTAATTATCAAAACTCTATTACTTTTTAATGTACAAAACGTCATTTATGTGTTGATGGATCTTCCAAAAGTAAACCATTTATGGATTGATCTGATGGTAGAAAATGAGACGTAGTCTCAATAACTAATTAAGAGATAGTGAGTTCGTTCCATGATGATCATCTATACTTAAGAATTAATTTTTTTTTACGATTTTTCTTGACATATAATGACTGCTGTTTGTAATTTTGCAGGCGAAATGTCATGAAATAAAGACCTTTTGAGTTTCAATAATAAGGTGAAATGTGCAGGGAATGAGATCCGTTAAGCATTAATGTCTATGGTGGTACTCCTATATGTTGTATTTTTCTTCATACATTCGAGTATTTAAAGTGTGTACTTCTTTTTTGGGATAAATGAAATATCTATAACAATGTCAATTTTATATATCTTTATTTGAAAGCTTTATGTAAGCAATTTTATTTTCTAATTTTACAAAATTTTGTGAAGTGAGAGGATCAAAACTGTAATCTCAAGATCGATTCTCGACAATGCAATTTGTT AAATTTAATGCTAAATGTACATTGTTTTTCACAACACGAAGTTTTTGTTATTGTGCAAGAACATGGGGTATCTAAGCATGAAATGTTTACCAGTTTGGTTGTTTTTGTTGGCAACAACAAGTTTGGTCGAAAAAGGCAAAGGGGAAACTTGTAGTTTCACCTTCTTCTCTTCCCTTGCTAGGTTGATGCCTTGTAGGCCATCGGTCGCTCCATTCCGGCCCATCCCGCCGACCGTGGCCTGTTGCAATGCAGTCAAAACTCTTGGCCAGCCTTGCTTGTGTGTGCTTGTCAATGGCCCCCCTATTACCGGCGTTGATCGTGAGTTGGCCATGCTGTTGCCGCAGAAGTGCACTGCCGATTTTGATCCATGCGAAATGTCATGAAATAAAGACCTTTTGAGTTTCAATAATAAGGTGAAATGTGCAGGGAATGAGATCCGTTAAGCATTAATGTCTATGGTGGTACTCCTATATGTTGTATTTTTCTTCATACATTCGAGTATTTAAAGTGTGTACTTCTTTTTTGGGATAAATGAAATATCTATAACAATGTCAATTTTATATATCTTTATTTGAAAGCTTTATGTAAGCAATTTTATTTTCTAATTTTACAAAATTTTGTGAAGTGAGAGGATCAAAACTGTAATCTCAAGATCGATTCTCGACAATGCAATTTGTT ATGTACATTGTTTTTCACAACACGAAGTTTTTGTTATTGTGCAAGAACATGGGGTATCTAAGCATGAAATGTTTACCAGTTTGGTTGTTTTTGTTGGCAACAACAAGTTTGGTCGAAAAAGGCAAAGGGGAAACTTGTAGTTTCACCTTCTTCTCTTCCCTTGCTAGGTTGATGCCTTGTAGGCCATCGGTCGCTCCATTCCGGCCCATCCCGCCGACCGTGGCCTGTTGCAATGCAGTCAAAACTCTTGGCCAGCCTTGCTTGTGTGTGCTTGTCAATGGCCCCCCTATTACCGGCGTTGATCGTGAGTTGGCCATGCTGTTGCCGCAGAAGTGCACTGCCGATTTTGATCCATGCGAAATGTCATGA MYIVFHNTKFLLLCKNMGYLSMKCLPVWLFLLATTSLVEKGKGETCSFTFFSSLARLMPCRPSVAPFRPIPPTVACCNAVKTLGQPCLCVLVNGPPITGVDRELAMLLPQKCTADFDPCEMS Homology
BLAST of Cmc04g0105981 vs. NCBI nr
Match: XP_008461785.1 (PREDICTED: protein LIM3 [Cucumis melo]) HSP 1 Score: 256.9 bits (655), Expect = 8.7e-65 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Cmc04g0105981 vs. NCBI nr
Match: XP_004149605.1 (protein LIM1 [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51 Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cmc04g0105981 vs. NCBI nr
Match: XP_038903285.1 (protein LIM3 [Benincasa hispida]) HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47 Identity = 93/105 (88.57%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of Cmc04g0105981 vs. NCBI nr
Match: KAG7036573.1 (hypothetical protein SDJN02_00192, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42 Identity = 80/105 (76.19%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Cmc04g0105981 vs. NCBI nr
Match: XP_022949330.1 (protein LIM1-like [Cucurbita moschata]) HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42 Identity = 80/105 (76.19%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Cmc04g0105981 vs. ExPASy TrEMBL
Match: A0A1S3CFZ5 (protein LIM3 OS=Cucumis melo OX=3656 GN=LOC103500304 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.2e-65 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Cmc04g0105981 vs. ExPASy TrEMBL
Match: A0A6J1GCG0 (protein LIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111452716 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.7e-43 Identity = 80/105 (76.19%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Cmc04g0105981 vs. ExPASy TrEMBL
Match: A0A6J1KEI1 (protein LIM3-like OS=Cucurbita maxima OX=3661 GN=LOC111493120 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.7e-42 Identity = 80/105 (76.19%), Postives = 93/105 (88.57%), Query Frame = 0
BLAST of Cmc04g0105981 vs. ExPASy TrEMBL
Match: A0A6J1DFH7 (protein LIM3 OS=Momordica charantia OX=3673 GN=LOC111020340 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.5e-41 Identity = 82/105 (78.10%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of Cmc04g0105981 vs. ExPASy TrEMBL
Match: A0A0D2U0U9 (AAI domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_008G105400 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.2e-33 Identity = 65/105 (61.90%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Cmc04g0105981 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 117.5 bits (293), Expect = 7.7e-27 Identity = 48/76 (63.16%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Cmc04g0105981 vs. TAIR 10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26 Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|