Cmc04g0104671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0104671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 22649945 .. 22651633 (+)
RNA-Seq Expression	Cmc04g0104671
Synteny	Cmc04g0104671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGAAGACCTTTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGCTGATGTACCGAAGACGACCTTTCATTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAACACTTACGTATGGTTCTGCAAACCCTTTAGGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGACAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTCAGTTAACGAGGAAGGGAGCTCCTTTTGTTAGGAGCAAGGCATGTGAGGACAGCTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGAGTTGTATATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGTAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCATTACTTGTATGGTGACAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAAGATTACGATTGTGAGATACTGTATCATCCAGGCAAGACAAATGTGGTAGCTGATGCTCTTAGTAAAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTAGAGAGAGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCTCAGTTGTCGATACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTAATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGCAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTGATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAAACACCAAGGCAGAGACCAGCGGGTTTATTACAACCCTTGAGCGTACCAGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTCATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCGCACTAA

mRNA sequence

ATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGAAGACCTTTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGCTGATGTACCGAAGACGACCTTTCATTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAACACTTACGTATGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGACAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTCAGTTAACGAGGAAGGGAGCTCCTTTTGTTAGGAGCAAGGCATGTGAGGACAGCTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGAGTTGTATATTGATGCAGCAAGGTAAGATATGGAGGCATTACTTGTATGGTGACAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAAGATTACGATTGTGAGATACTGTATCATCCAGGCAAGACAAATGTGGTAGCTGATGCTCTTAGTAAAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTAGAGAGAGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCTCAGTTGTCGATACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTAATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGCAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTGATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAAACACCAAGGCAGAGACCAGCGGGTTTATTACAACCCTTGAGCGTACCAGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTCATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCGCACTAA

Coding sequence (CDS)

ATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGAAGACCTTTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGCTGATGTACCGAAGACGACCTTTCATTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAACACTTACGTATGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGACAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTTCCGTATAGCTACTCCTCTTACTCAGTTAACGAGGAAGGGAGCTCCTTTTGTTAGGAGCAAGGCATGTGAGGACAGCTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGTAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGAGTTGTATATTGATGCAGCAAGGTAAGATATGGAGGCATTACTTGTATGGTGACAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAAGATTACGATTGTGAGATACTGTATCATCCAGGCAAGACAAATGTGGTAGCTGATGCTCTTAGTAAAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTAGAGAGAGCTGAGATTGCAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCTCAGTTGTCGATACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCTGTTGAGTTCTCCATATCCTCTAATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGCAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTGATATGAAGAGAGAGGTGGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAAACACCAAGGCAGAGACCAGCGGGTTTATTACAACCCTTGAGCGTACCAGAATGGAAGTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTCATAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCGCACTAA

Protein sequence

MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTTFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQQGKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH

Homology

[Close]

BLAST of Cmc04g0104671 vs. NCBI nr
Match: KAA0025366.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 991.5 bits (2562), Expect = 2.7e-285
Identity = 498/513 (97.08%), Postives = 498/513 (97.08%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60

Query: 61  FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 LRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180
           LR       VVSKAGVSVDPAKIE VTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT
Sbjct: 121 LR------RVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180

Query: 181 PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240
           PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM
Sbjct: 181 PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240

Query: 241 QQG-----KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 300
           QQ      KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 241 QQAVVFALKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 300

Query: 301 GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRI 360
           GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRI
Sbjct: 301 GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRI 360

Query: 361 IDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPF 420
           IDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPF
Sbjct: 361 IDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPF 420

Query: 421 SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 480
           SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRP GLLQPLSVPEWKW
Sbjct: 421 SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPTGLLQPLSVPEWKW 480

Query: 481 ENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 509
           ENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
Sbjct: 481 ENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 507

[Close]

BLAST of Cmc04g0104671 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 960.7 bits (2482), Expect = 5.1e-276
Identity = 480/539 (89.05%), Postives = 492/539 (91.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGA VFSK DLRSGYHQLRIKD DVPKT 
Sbjct: 592  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKFDLRSGYHQLRIKDEDVPKTA 651

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 652  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEH 711

Query: 121  LRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180
            LRMVSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF RIAT
Sbjct: 712  LRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 771

Query: 181  PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240
            PLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LM
Sbjct: 772  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 831

Query: 241  QQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT 300
            QQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Sbjct: 832  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 891

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERA
Sbjct: 892  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 951

Query: 361  EIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLL 420
            EIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SS+GGLL
Sbjct: 952  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1011

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEFVSKCL
Sbjct: 1012 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1071

Query: 481  VCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 509
            VCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Sbjct: 1072 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 1130

[Close]

BLAST of Cmc04g0104671 vs. NCBI nr
Match: KAA0036553.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 953.7 bits (2464), Expect = 6.2e-274
Identity = 477/539 (88.50%), Postives = 491/539 (91.09%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLP I+DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 509  MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTA 568

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 569  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 628

Query: 121  LRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180
            LR+VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE RSFLGLAGYYRRFVENF  IAT
Sbjct: 629  LRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIAT 688

Query: 181  PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240
            PLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LM
Sbjct: 689  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 748

Query: 241  QQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT 300
            QQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Sbjct: 749  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 808

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERA
Sbjct: 809  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 868

Query: 361  EIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLL 420
            EIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SS+GGLL
Sbjct: 869  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 928

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEF S+CL
Sbjct: 929  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCL 988

Query: 481  VCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 509
            VCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTL+GF VIWVVVDRLTKSAH
Sbjct: 989  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAH 1047

[Close]

BLAST of Cmc04g0104671 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 950.7 bits (2456), Expect = 5.3e-273
Identity = 481/562 (85.59%), Postives = 495/562 (88.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            LRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW 300
            PDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALS 360
            RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  KKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLV 420
            +KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQAVEFS+SS+GGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGL 509
            D+KRVYWWR+MKREVAEFVS+CLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

[Close]

BLAST of Cmc04g0104671 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 950.7 bits (2456), Expect = 5.3e-273
Identity = 482/562 (85.77%), Postives = 493/562 (87.72%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            LRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPFV SKACEDSFQ LKQKLVTAPVLTV
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW 300
            PDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALS 360
            RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  KKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLV 420
            +KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQ  EFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGL 509
            DLKRVYWWR+MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

[Close]

BLAST of Cmc04g0104671 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 170/572 (29.72%), Postives = 283/572 (49.48%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F    G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            ++                        V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG   Y R+F+    ++  PL  L +K   +  +     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG---------------------------------- 300
             D S   ++ +DAS   +  +L Q+                                   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
              K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIID 420
             N +ADALS+       ++    P+ +D E   I          + Q+SI    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 508
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   +P G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

[Close]

BLAST of Cmc04g0104671 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 170/572 (29.72%), Postives = 283/572 (49.48%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F    G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            ++                        V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG   Y R+F+    ++  PL  L +K   +  +     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG---------------------------------- 300
             D S   ++ +DAS   +  +L Q+                                   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
              K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIID 420
             N +ADALS+       ++    P+ +D E   I          + Q+SI    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 508
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   +P G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

[Close]

BLAST of Cmc04g0104671 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 170/572 (29.72%), Postives = 283/572 (49.48%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F    G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            ++                        V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG   Y R+F+    ++  PL  L +K   +  +     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG---------------------------------- 300
             D S   ++ +DAS   +  +L Q+                                   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
              K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIID 420
             N +ADALS+       ++    P+ +D E   I          + Q+SI    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 508
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   +P G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

[Close]

BLAST of Cmc04g0104671 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 170/572 (29.72%), Postives = 283/572 (49.48%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F    G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            ++                        V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG   Y R+F+    ++  PL  L +K   +  +     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG---------------------------------- 300
             D S   ++ +DAS   +  +L Q+                                   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
              K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIID 420
             N +ADALS+       ++    P+ +D E   I          + Q+SI    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 508
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   +P G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

[Close]

BLAST of Cmc04g0104671 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 170/572 (29.72%), Postives = 283/572 (49.48%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            +R+ +DY+ LNK    N YPLP IE L  ++QG+T+F+K+DL+S YH +R++  D  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F    G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LR-----------------------MVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            ++                        V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG   Y R+F+    ++  PL  L +K   +  +     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG---------------------------------- 300
             D S   ++ +DAS   +  +L Q+                                   
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  --KIWRHYLYG--DKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
              K WRHYL    +  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  TNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIID 420
             N +ADALS+       ++    P+ +D E   I          + Q+SI    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 508
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   +P G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

[Close]

BLAST of Cmc04g0104671 vs. ExPASy TrEMBL
Match: A0A5A7SHP6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00500 PE=4 SV=1)

HSP 1 Score: 991.5 bits (2562), Expect = 1.3e-285
Identity = 498/513 (97.08%), Postives = 498/513 (97.08%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60

Query: 61  FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 LRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180
           LR       VVSKAGVSVDPAKIE VTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT
Sbjct: 121 LR------RVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180

Query: 181 PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240
           PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM
Sbjct: 181 PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240

Query: 241 QQG-----KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 300
           QQ      KIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP
Sbjct: 241 QQAVVFALKIWRHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP 300

Query: 301 GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRI 360
           GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRI
Sbjct: 301 GKTNVVADALSKKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRI 360

Query: 361 IDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPF 420
           IDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPF
Sbjct: 361 IDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPF 420

Query: 421 SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKW 480
           SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRP GLLQPLSVPEWKW
Sbjct: 421 SMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPTGLLQPLSVPEWKW 480

Query: 481 ENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 509
           ENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH
Sbjct: 481 ENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 507

[Close]

BLAST of Cmc04g0104671 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 2.5e-276
Identity = 480/539 (89.05%), Postives = 492/539 (91.28%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGA VFSK DLRSGYHQLRIKD DVPKT 
Sbjct: 592  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKFDLRSGYHQLRIKDEDVPKTA 651

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFR+FLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 652  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEH 711

Query: 121  LRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180
            LRMVSFLGHVVSKAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYRRFVENF RIAT
Sbjct: 712  LRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 771

Query: 181  PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240
            PLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LM
Sbjct: 772  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 831

Query: 241  QQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT 300
            QQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Sbjct: 832  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 891

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERA
Sbjct: 892  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 951

Query: 361  EIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLL 420
            EIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SS+GGLL
Sbjct: 952  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1011

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEFVSKCL
Sbjct: 1012 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1071

Query: 481  VCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 509
            VCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTLRGF VIWVVVDRLTKSAH
Sbjct: 1072 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 1130

[Close]

BLAST of Cmc04g0104671 vs. ExPASy TrEMBL
Match: A0A5A7T0Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00570 PE=4 SV=1)

HSP 1 Score: 953.7 bits (2464), Expect = 3.0e-274
Identity = 477/539 (88.50%), Postives = 491/539 (91.09%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLP I+DLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 509  MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTA 568

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 569  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 628

Query: 121  LRMVSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIAT 180
            LR+VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE RSFLGLAGYYRRFVENF  IAT
Sbjct: 629  LRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIAT 688

Query: 181  PLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILM 240
            PLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL C+LM
Sbjct: 689  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 748

Query: 241  QQG-------------------------------KIWRHYLYGDKIQIFTDHKSLKYFFT 300
            QQG                               KIWRHYLYG+KIQIFTDHKSLKYFFT
Sbjct: 749  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 808

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALSKKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS+KVSHSAALITRQAPLHRDLERA
Sbjct: 809  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 868

Query: 361  EIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSNGGLL 420
            EIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SS+GGLL
Sbjct: 869  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 928

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRDMKREVAEFVSKCL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWR+MKREVAEF S+CL
Sbjct: 929  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCL 988

Query: 481  VCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFIVIWVVVDRLTKSAH 509
            VCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGLPRTL+GF VIWVVVDRLTKSAH
Sbjct: 989  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAH 1047

[Close]

BLAST of Cmc04g0104671 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 2.5e-273
Identity = 482/562 (85.77%), Postives = 493/562 (87.72%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            LRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPFV SKACEDSFQ LKQKLVTAPVLTV
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW 300
            PDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALS 360
            RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  KKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLV 420
            +KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQ  EFS+SS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGL 509
            DLKRVYWWR+MKREVAEFVSKCLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

[Close]

BLAST of Cmc04g0104671 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 2.5e-273
Identity = 481/562 (85.59%), Postives = 495/562 (88.08%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIEDLFDQLQGATVFSKIDLRSGYHQLRIKDADVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            F SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRM-----------------------VSFLGHVVSKAGVSVDPAKIETVTSWPRPSTVSE 180
            LRM                       VSFLGHVVSKAGVSVDPAKIE VT W RPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFFRIATPLTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENF RIATPLTQLTRKGAPFV SKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGSGSFVIYSDASKKGLSCILMQQG-------------------------------KIW 300
            PDGSGSFVIYSDASKKGL C+LMQQG                               KIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGDKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKTNVVADALS 360
            RHYLYG+KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  KKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLSIQPTLRQRIIDAQSNDPYLV 420
            +KVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL++QPTLRQRIIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEAGQAVEFSISSNGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQAVEFS+SS+GGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRDMKREVAEFVSKCLVCQQVKTPRQRPAGLLQPLSVPEWKWENVSMDFITGL 509
            D+KRVYWWR+MKREVAEFVS+CLVCQQVK PRQ+PAGLLQPLS+PEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

[Close]

BLAST of Cmc04g0104671 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 9.9e-20
Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 124 VSFLG--HVVSKAGVSVDPAKIETVTSWPRPSTVSEVRSFLGLAGYYRRFVENFFRIATP 183
           +++LG  H++S  GVS DPAK+E +  WP P   +E+R FLGL GYYRRFV+N+ +I  P
Sbjct: 30  IAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRP 89

Query: 184 LTQLTRKGAPFVRSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCILMQ 243
           LT+L +K +    ++    +F+ LK  + T PVL +PD    FV  +   K   SC + +
Sbjct: 90  LTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV--TRVGKWNWSCFITR 147

The following BLAST results are available for this feature:

BLAST of Cmc04g0104671 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025366.1	2.7e-285	97.08	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	5.1e-276	89.05	pol protein [Cucumis melo var. makuwa]	[more]
KAA0036553.1	6.2e-274	88.50	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	5.3e-273	85.59	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	5.3e-273	85.77	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0104671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.5e-73	29.72	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.5e-73	29.72	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.5e-73	29.72	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.5e-73	29.72	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.5e-73	29.72	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0104671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SHP6	1.3e-285	97.08	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00500 P...	[more]
A0A5A7U7V9	2.5e-276	89.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7T0Y9	3.0e-274	88.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3BPI1	2.5e-273	85.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	2.5e-273	85.59	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]

BLAST of Cmc04g0104671 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	9.9e-20	40.50	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 145..232 e-value: 2.8E-28 score: 99.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..144 e-value: 8.3E-54 score: 184.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 8.3E-54 score: 184.1
None	No IPR available	GENE3D	1.10.340.70		coord: 366..455 e-value: 5.5E-18 score: 67.0
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 126..241 coord: 2..122 coord: 248..482
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 225..309 e-value: 3.21857E-33 score: 120.29
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..131 e-value: 2.26348E-64 score: 205.137
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 245..287 e-value: 2.4E-11 score: 43.8
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 196..244 e-value: 3.0E-11 score: 43.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..148 e-value: 1.5E-20 score: 73.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..166 score: 12.50394
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 400..456 e-value: 1.1E-16 score: 60.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0104671.1	Cmc04g0104671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding