Cmc04g0103681 (gene) Melon (Charmono) v1.1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTAAACTTAATCCAATTTGATGTGACTACCTAAAGTTCAAATTTTCGTACTACAATCAAGTAACCTTGGTTGATTGGATTTATACTTTACCTCAATAACCGCTGAACATGAATATTTAATATCGGGTTTAAAGAAAACAAAATGCCGATCTTTAACGTCAATCAAAATGCAAAACTGACGTTAAAGATCAAATTTTAATGTAGGAACAAGGTCAGTGCACAAATCCTGTTAAATTGCTGGGTATCAAGGTACTGTTTCTTCTATTCCATCTTTTCTTTGTTGTAATCCTTGTTTGATTTTTCAATTTGTTGGGTTTTCTTAGGTTTGTTTACTCAGGCATTGAACACTTTTCCGTTTGCTGTTGATTTTGATCATATAAAGATTGATAGTGATAATTATCTCATGGATTTGTAGTACTTATCTTTTTATTGCAATTGGAAGTGTTTTGTTTATTCGTGGAGTGAATTACTGTGTCTAGTCGAACCATTCGATTGTAAATGGTCTTCAAATATTATTTTTCTCATTGATTTTCATTCCCGCAAACTTGTGGGGTTGATGGATATTGTTATGTTTTCGTTTCCCTGGAAGTGGTGCAGAATTTGATTTAATTGAATTATTATTCCTGTTATAGGATTGACCTTTTATTCTTCTCCTATTTTCCTGTTCCCTTAAGGTGGATAAAAGGTTTCCTGGATGGAGAAGCACTATGTCAGTTAACTGTTTTATGTACTATGAATATTTTTGTTTGTTTGTTTCATTTCAATTTCAACACTGGCACTTTACTAGTGTACTTCTCTTCTATCTATAGAAGGCTTGTGTTCACTTTTGTAAAATCTAATATAATTATTGTCGTTCTTTTGTACTTGTCTACAAATTTGGATTCATTTAGCCACTGACATTTGAATTGATGATGTGCTTTACCATTTGGTAGTAATGTCAACAAGTTCTTCAATGAAGTTAGTATATATGTGCTTGTTTTGGTAAAGCAATTTGGATTTTTTCTCTGTCATTTACAATCTATTCCTTTTAGCCTCCATTCAAACCAATGGTGGCCACTACCTATCTACCTAGCTGATTAGGAGATTAGAATTTTATGATTGTCTTCAACTAATGTTGTAGGATCGTATATACGTTCCTACTATCTACCATTTTTCTCAGGATAAACCATAAAATATTAAATCTTTCTGTTTGTACTTCATTCTTAGGTTTTCTTCAATATACGCACACACAGATTATGCTTTCACATATTTATACTATTAAATTTCAATTCTCTGTTGCAGAATCATTGCGTTCTAGCCTTACACTAGAAGGAGAGAGAACTAAGCAAGAGGTTCAATCTTACTGTCAAGTATTTTAACACAGTTGTTTCTTCATTTCTTTCTTCAATACTTTCAATTGTCGTGATGTCTAATAATTTTCAACTTCTCTGATTTTACAGGATTTGTTGTCCTGTAGTTTTAAAAGATGGGTCCACTTTGATAGGATAAATTTTTCTGTCTCTCTCTTATACATTTTTTCTTTTACTTAATCTGATACAATATAACTTCTGCTGGTAGATAGCCTTTTGGCTTTCTGCATGAACACTAAGGTAGTGGGCATGGATAACTTGGTACTTGTAGATTATACAGGAATACTACAAAGATAGGATTAAAAAAAGAGGAATACTGCAAAGATAAAGGTTAGAACTACTGCTAGGATAACAAAGATATCAGATGCAAATTCATAATTAGCTAAAGAGCTTGTTAGGGCAGTGGTTACATTGGAAAAAAACTTTTGTCCTTGGAATGAGTCGTGGGGGAGATCTAAAGCTCATGCTTGACTAAGCATTTAATTGGGGGAGACAACTAGTCCTTGGGAAAGTGTTCAGTGCCTAAGAAAAGTATATTACATTGGTTTTACTTTCGAAAAACGTCATCCTCTCCCAACCCAGACATGAAGCTCAGCCCCTTGGGTGGGCAAAACATCCTCAAGATTAATACAACTATAGGAGTGATTCATGATCAATAATCCAGTTATAAAAAGAATGAAGAAAGTAATTTATCTGTATTGAAATTGTATCTCTCATGTCGTAAACTGATCGATGTGGGCGAACTACTAGGAATATTTCTCACGTAAAATCAGTTTTAAATACTAGGTTATAGCATGAAATAGTTCACATTTTCTCTCTTTAAGTCCGCAATTTGATTTAAACAGTATTACCAGAGGACTTTTTTTTGCAAAAATGCTCTTCCACTCGATTAAGGCAACTCCCTCTCCCTGTCATTTAGAATGAACATTGAATAGTTTCTTGGAGTTGGTCATTAGTGGGAGGAGCCTTTTGATGATTAGTTGTGTGAGCCATGAACATTATGTGTTACGATTAGGGTCCCGACATCATTGAGTTTTCTCTGTTCTTCATGTACAACTAAATCATGAACATCTTAACTTTGCAGTGCCAGTGTGTTTGGGGTCTCAGTTGAATCAATGCAATGTTCTACTGATTCAAGAGGAAATAGTGTACCAACAATACTTTTGCTAATGCAGGATCGATTGTACCGAAATCGAGGTCTCAAGGTACCGAAATCATGGTTAATGGTGGAACATGTCAACTTATTTAGTTGCTGTTTTCGTTTTCTTGTGCTTAATTTCTGTGTCGTCTTTAGTTTCTGTTTTAAAGTTAAGGCTCTCCGAACTATTTTGTTGATCTTTGTTTGCTATTTTCAAGTTAAGGATCTTTGCATTGTTAGATCTTAAATTTTGGTTAATTAGGTTGTGCTTGAAATTGAGCGACTAATCTCTAAGTCATGTTTTCATAAATGGTTTATGGTTATCATACAGTTTTAGTAGTCATTTGTGTTTGAATTTAAGATTACTCTTGTTGTTTTGATATTAGGAGATATATGGTTAAGTTATGGAAGTGCCTAGAGTTTATTTAAAGTTGTAATATGGTTTGCTTCTATTTTGTTTTGTGATATTTTCATTGTCCTCAAGAATGGTTATGCCAATTATCTATAGTGACAAGGATCCACAAATGTGTATATATCATGTTTGAAACTGATGCAAAATTTTGTTTCTGTTAAAGATTTTTTTTTTTTTTTTTTTTTGGGTCTACTAAGTACGAATGACAATATTTCACACTTGATATGGTTGAAAATTTGTGACTCGTGCTTGAAAATAGTTTAATATGTACCTATTAATGCGTGCAGGAATAGTTTGAATCTAATTCATCCTTGTAATCTTGTTCAGAATCTTTTGTTCTCTAATGGGGTCTCTGATTTTGAGATGTTTAATATATTGGAGCTTATAGTTTTAGTGATGTTATTTTCCATATTTCATGTCTATATAGGTACGTGAGATTCATCCATGCTATGAAAGAGCAAGGTACGGTTGGAGGCAATTTCAGCTCAAAAGCTAATGTGTTTGGAAATGGTCCTAATGTGTAACTTCCACAAAAGTTAGAATTGTACTAGATATGTTTCTTGGGAGTACTGAAATGTAAATATTAGTTTATTAATATACAAGTTCTGAGCATAATAGAAACAGTTTTGTTGGAAGTTTAGTTTCTTGTTTATTTGTAAGTGTGGGTATTTGGTGTAAAGTACCGATGATTTTTCTCGTATTAATATAATGTGGAAGTTCTAAATTATTGTTTGTGGAAATACATTTGTTGTATTATATATATGATGACGGATATT CTTTTAAACTTAATCCAATTTGATGTGACTACCTAAAGTTCAAATTTTCGTACTACAATCAAGTAACCTTGGTTGATTGGATTTATACTTTACCTCAATAACCGCTGAACATGAATATTTAATATCGGGTTTAAAGAAAACAAAATGCCGATCTTTAACGTCAATCAAAATGCAAAACTGACGTTAAAGATCAAATTTTAATGTAGGAACAAGGTCAGTGCACAAATCCTGTTAAATTGCTGGGTATCAAGAATCATTGCGTTCTAGCCTTACACTAGAAGGAGAGAGAACTAAGCAAGAGTGCCAGTGTGTTTGGGGTCTCAGTTGAATCAATGCAATGTTCTACTGATTCAAGAGGAAATAGTGTACCAACAATACTTTTGCTAATGCAGGATCGATTGTACCGAAATCGAGGTCTCAAGGTACGTGAGATTCATCCATGCTATGAAAGAGCAAGGTACGGTTGGAGGCAATTTCAGCTCAAAAGCTAATGTGTTTGGAAATGGTCCTAATGTGTAACTTCCACAAAAGTTAGAATTGTACTAGATATGTTTCTTGGGAGTACTGAAATGTAAATATTAGTTTATTAATATACAAGTTCTGAGCATAATAGAAACAGTTTTGTTGGAAGTTTAGTTTCTTGTTTATTTGTAAGTGTGGGTATTTGGTGTAAAGTACCGATGATTTTTCTCGTATTAATATAATGTGGAAGTTCTAAATTATTGTTTGTGGAAATACATTTGTTGTATTATATATATGATGACGGATATT ATGCAATGTTCTACTGATTCAAGAGGAAATAGTGTACCAACAATACTTTTGCTAATGCAGGATCGATTGTACCGAAATCGAGGTCTCAAGGTACGTGAGATTCATCCATGCTATGAAAGAGCAAGGTACGGTTGGAGGCAATTTCAGCTCAAAAGCTAA MQCSTDSRGNSVPTILLLMQDRLYRNRGLKVREIHPCYERARYGWRQFQLKS Homology
BLAST of Cmc04g0103681 vs. NCBI nr
Match: XP_004148879.1 (rho GTPase-activating protein 2 [Cucumis sativus] >KGN45394.2 hypothetical protein Csa_015623 [Cucumis sativus]) HSP 1 Score: 59.7 bits (143), Expect = 8.7e-06 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Cmc04g0103681 vs. NCBI nr
Match: XP_038897013.1 (rho GTPase-activating protein 2 [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 8.7e-06 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Cmc04g0103681 vs. NCBI nr
Match: XP_008451421.1 (PREDICTED: rho GTPase-activating protein 2 [Cucumis melo] >KAA0057546.1 rho GTPase-activating protein 2 [Cucumis melo var. makuwa] >TYK18267.1 rho GTPase-activating protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 8.7e-06 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Cmc04g0103681 vs. NCBI nr
Match: XP_022991727.1 (rho GTPase-activating protein 2 [Cucurbita maxima]) HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05 Identity = 28/34 (82.35%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of Cmc04g0103681 vs. NCBI nr
Match: XP_023522204.1 (rho GTPase-activating protein 2-like [Cucurbita pepo subsp. pepo] >XP_023548476.1 rho GTPase-activating protein 2-like [Cucurbita pepo subsp. pepo] >XP_023548489.1 rho GTPase-activating protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 57.4 bits (137), Expect = 4.3e-05 Identity = 28/34 (82.35%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy Swiss-Prot
Match: F4JI46 (Rho GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP2 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 3.1e-06 Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy Swiss-Prot
Match: Q8GYY5 (Rho GTPase-activating protein 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP3 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 3.4e-05 Identity = 24/34 (70.59%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy TrEMBL
Match: A0A5D3D3Z7 (Rho GTPase-activating protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002090 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-06 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy TrEMBL
Match: A0A0A0KAK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390200 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-06 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy TrEMBL
Match: A0A1S3BQV1 (rho GTPase-activating protein 2 OS=Cucumis melo OX=3656 GN=LOC103492720 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-06 Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy TrEMBL
Match: A0A6J1JMN4 (rho GTPase-activating protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111488256 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.1e-05 Identity = 28/34 (82.35%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of Cmc04g0103681 vs. ExPASy TrEMBL
Match: A0A6J1D9I6 (rho GTPase-activating protein 2 OS=Momordica charantia OX=3673 GN=LOC111018480 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.1e-05 Identity = 28/34 (82.35%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of Cmc04g0103681 vs. TAIR 10
Match: AT4G03100.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain ) HSP 1 Score: 51.6 bits (122), Expect = 2.2e-07 Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Cmc04g0103681 vs. TAIR 10
Match: AT2G46710.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain ) HSP 1 Score: 48.1 bits (113), Expect = 2.4e-06 Identity = 24/34 (70.59%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Cmc04g0103681 vs. TAIR 10
Match: AT3G11490.1 (rac GTPase activating protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.0e-04 Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Cmc04g0103681 vs. TAIR 10
Match: AT5G22400.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain ) HSP 1 Score: 42.4 bits (98), Expect = 1.3e-04 Identity = 22/34 (64.71%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Cmc04g0103681 vs. TAIR 10
Match: AT1G08340.1 (Rho GTPase activating protein with PAK-box/P21-Rho-binding domain ) HSP 1 Score: 41.2 bits (95), Expect = 3.0e-04 Identity = 20/34 (58.82%), Postives = 23/34 (67.65%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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