Cmc04g0103581 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103581
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr04: 20731036 .. 20732138 (+)
RNA-Seq Expression	Cmc04g0103581
Synteny	Cmc04g0103581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCGCACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTTTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAAGAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGTGCCCTTCTTCTCTCTGCCTCATCTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATATCGTCTTCCTTCCTCCGTTCTTCAGAACATCTCTCCATTCGAAAAACTATATGGTACTCCTCCCAACTATTCTAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACGTGCTCGCTTTTGTTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCATACTATGTTCTCTCGTTTGTCCTCCTTCCATACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACACATCTATTGACCTTTTTCCTCCCTCTGAGTCCCCTCTTCGTAATGAGCTTGCTCAATCTGCACCTACTTCGGCAATCTCGGACCAATCGTCCATCTCTGATGGCAGTCCTGAACCTACTCCAGACACCCCTCATCGTCGTTCTACTGGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTTTCCACTATTATTTCTCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCATACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGTAAGTGGATCTATAAAATCAAGACTCACTCTGATGGTACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCTTGTGGCTCGAATGACGTCTCTTCGCAGTTTATTAGCTGTTGCTGCAGCCAAGCAGTGA

mRNA sequence

ATGATTCGCACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTTTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAAGAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAAACATCTCTCCATTCGAAAAACTATATGGTACTCCTCCCAACTATTCTAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACGTGCTCGCTTTTGTTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCATACTATGTTCTCTCGTTTGTCCTCCTTCCATACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACACATCTATTGACCTTTTTCCTCCCTCTGAGTCCCCTCTTCGTAATGAGCTTGCTCAATCTGCACCTACTTCGGCAATCTCGGACCAATCGTCCATCTCTGATGGCAGTCCTGAACCTACTCCAGACACCCCTCATCGTCGTTCTACTGGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTTTCCACTATTATTTCTCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCATACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGTAAGTGGATCTATAAAATCAAGACTCACTCTGATGGTACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCTTGTGGCTCGAATGACGTCTCTTCGCAGTTTATTAGCTGTTGCTGCAGCCAAGCAGTGA

Coding sequence (CDS)

ATGATTCGCACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAAAGACTCCACTTTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAAGAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAAACATCTCTCCATTCGAAAAACTATATGGTACTCCTCCCAACTATTCTAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACGTGCTCGCTTTTGTTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCATACTATGTTCTCTCGTTTGTCCTCCTTCCATACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTGACACATCTATTGACCTTTTTCCTCCCTCTGAGTCCCCTCTTCGTAATGAGCTTGCTCAATCTGCACCTACTTCGGCAATCTCGGACCAATCGTCCATCTCTGATGGCAGTCCTGAACCTACTCCAGACACCCCTCATCGTCGTTCTACTGGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTTTCCACTATTATTTCTCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCATACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGTAAGTGGATCTATAAAATCAAGACTCACTCTGATGGTACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCTTGTGGCTCGAATGACGTCTCTTCGCAGTTTATTAGCTGTTGCTGCAGCCAAGCAGTGA

Protein sequence

MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILDSNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPHRRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRSLLAVAAAKQ

Homology

[Close]

BLAST of Cmc04g0103581 vs. NCBI nr
Match: TYJ98155.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 644.0 bits (1660), Expect = 6.9e-181
Identity = 320/369 (86.72%), Postives = 322/369 (87.26%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGR ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFGCA
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGF CWDPLSNRLRISRHVTFWEHTMFSRLS
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFHCWDPLSNRLRISRHVTFWEHTMFSRLS 580

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESPL NELAQSAPTSAISDQSSI D SPEPTPDTP 
Sbjct: 581 SFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSAISDQSSIPDDSPEPTPDTPP 640

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
            RST VREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV
Sbjct: 641 SRSTRVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 700

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 701 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRS 760

[Close]

BLAST of Cmc04g0103581 vs. NCBI nr
Match: KAA0050251.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 642.5 bits (1656), Expect = 2.0e-180
Identity = 320/369 (86.72%), Postives = 322/369 (87.26%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGR ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFGCA
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGF CWDPLSNRLRISRHVTFWEHTMFSRLS
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFHCWDPLSNRLRISRHVTFWEHTMFSRLS 580

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESPL NELAQSAPTSAISDQSSI D SPEPTPDTP 
Sbjct: 581 SFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSAISDQSSIPDDSPEPTPDTPP 640

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VREPPIHLQDYHCFSTIISLVE TSYQEASTDPLWQKAMNDELQALEKTHTWDYV
Sbjct: 641 RRSTRVREPPIHLQDYHCFSTIISLVELTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 700

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 701 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRS 760

[Close]

BLAST of Cmc04g0103581 vs. NCBI nr
Match: KAA0064888.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 640.2 bits (1650), Expect = 1.0e-179
Identity = 318/369 (86.18%), Postives = 324/369 (87.80%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGRAERKHRHILD
Sbjct: 1   MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 60

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFG A
Sbjct: 61  SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGYA 120

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS
Sbjct: 121 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESP+ NELAQSAPTSA S+QSSIS GSPEPTPDTP 
Sbjct: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPIGNELAQSAPTSATSNQSSISGGSPEPTPDTPP 240

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VREPPIHLQDYHCFSTIISLVEPTSYQEAS +P+WQKAMNDELQALEKTHTWDYV
Sbjct: 241 RRSTRVREPPIHLQDYHCFSTIISLVEPTSYQEASINPVWQKAMNDELQALEKTHTWDYV 300

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRS 360

[Close]

BLAST of Cmc04g0103581 vs. NCBI nr
Match: KAA0047306.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 636.3 bits (1640), Expect = 1.4e-178
Identity = 316/369 (85.64%), Postives = 322/369 (87.26%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSC HTSQ+NGRAERKHRHILD
Sbjct: 481 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCAHTSQQNGRAERKHRHILD 540

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFGCA
Sbjct: 541 SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 600

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGFRCWDPLSNRLR+SRH+TFWEHTMFSRLS
Sbjct: 601 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRLSRHITFWEHTMFSRLS 660

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQ FFT+TSIDLFPPSESPL NELAQSAPTSA SDQSSISDGSPEPTPDTP 
Sbjct: 661 SFHTSFSSPQAFFTNTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPP 720

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VREPPIHLQDYH FSTIISLVEPTSYQEAST+PLWQKAMNDELQALEKTHTWDYV
Sbjct: 721 RRSTRVREPPIHLQDYHYFSTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYV 780

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKA LVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 781 DLPPGKRPIGCKWIYKIKTHSDGTIERYKAHLVAKGYSQEYGIDYEETFAPVARMTSVRS 840

[Close]

BLAST of Cmc04g0103581 vs. NCBI nr
Match: KAA0031710.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 630.6 bits (1625), Expect = 7.9e-177
Identity = 316/369 (85.64%), Postives = 320/369 (86.72%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRT+FSCPIKTLR DNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGRAERKHRHILD
Sbjct: 520 MIRTKFSCPIKTLRIDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 579

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGT PNYSNLKTFGCA
Sbjct: 580 SVRALLLSASCPEKFWGEAALTSVYTINHLSSSVLQNISPFEKLYGTHPNYSNLKTFGCA 639

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRA  CCFLGYGTEHKGFRCWDPLSNRLRISRHV FWEHTMFSRLS
Sbjct: 640 CFVLLHPHEHTKLEPRACLCCFLGYGTEHKGFRCWDPLSNRLRISRHVPFWEHTMFSRLS 699

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESPL NELAQSAPTSA SDQSSISDGSPEPTPDTP 
Sbjct: 700 SFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPP 759

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VRE PIHLQDYHCFSTIISLVEPTSYQEAST+PLWQKAMNDELQALEKTHTWDYV
Sbjct: 760 RRSTRVRELPIHLQDYHCFSTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYV 819

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGI YEE FALVARMTS+ S
Sbjct: 820 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIVYEEKFALVARMTSVCS 879

[Close]

BLAST of Cmc04g0103581 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-40
Identity = 141/485 (29.07%), Postives = 196/485 (40.41%), Query Frame = 0


Query: 1    MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
            ++  +F   I TL +DN  E+       +LSQ G     S PHT + NG +ERKHRHI++
Sbjct: 556  LVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVE 615

Query: 61   SNI-----------------------------------SPFEKLYGTPPNYSNLKTFGCA 120
              +                                   SPF+KL+G PPNY  LK FGCA
Sbjct: 616  MGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCA 675

Query: 121  CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
            C+  L P+   KLE +++ C F+GY      + C    + RL  SRHV F E       +
Sbjct: 676  CYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTT 735

Query: 181  SFHTSFSSPQ--------PFFT-------------------DTSIDLFPPSESPLRNELA 240
            +F  S S  Q        P  T                   DTS    P S SPL     
Sbjct: 736  NFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTS-PRPPSSPSPLCTTQV 795

Query: 241  QSA--PTSAISDQSSISDGSP------------------------------EPTPDTPHR 300
             S+  P+S+IS  SS    +P                               P+P++P++
Sbjct: 796  SSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQ 855

Query: 301  R----------------STGVREP-----------------------------PIHL--- 331
                             ST + EP                             P++    
Sbjct: 856  NSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSM 915

[Close]

BLAST of Cmc04g0103581 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-40
Identity = 146/482 (30.29%), Postives = 194/482 (40.25%), Query Frame = 0


Query: 1    MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
            ++  +F   I T  +DN  E+       + SQ G     S PHT + NG +ERKHRHI++
Sbjct: 577  LLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVE 636

Query: 61   SNI-----------------------------------SPFEKLYGTPPNYSNLKTFGCA 120
            + +                                   SPF+KL+GT PNY  L+ FGCA
Sbjct: 637  TGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCA 696

Query: 121  CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE-------- 180
            C+  L P+   KL+ ++R C FLGY      + C    ++RL ISRHV F E        
Sbjct: 697  CYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNY 756

Query: 181  --------------------HTMF------------------------------------ 240
                                HT                                      
Sbjct: 757  LATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSS 816

Query: 241  SRL-SSFHTSFSS-----------PQPFFTDTSIDL-----------FPPSESPLRNELA 300
            S L SSF +SF S           PQP    T                P +ESP  ++LA
Sbjct: 817  SNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESP--SQLA 876

Query: 301  QSAPTSAISDQS------SISDGSPEPTPDT--------------------PHRRSTGVR 331
            QS  T A S  S      S S  S  PTP +                     +  S G R
Sbjct: 877  QSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTR 936

[Close]

BLAST of Cmc04g0103581 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.7e-39
Identity = 119/372 (31.99%), Postives = 180/372 (48.39%), Query Frame = 0


Query: 10  IKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILDS-------- 69
           +K LR+DN  EY    F  + S  G   +++ P T Q NG AER +R I++         
Sbjct: 544 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 603

Query: 70  ------------------NISPFEKLYGTPP---------NYSNLKTFGCACFVLLHPHE 129
                             N SP   L    P         +YS+LK FGC  F  +   +
Sbjct: 604 KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQ 663

Query: 130 HTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSP 189
            TKL+ ++  C F+GYG E  G+R WDP+  ++  SR V F E  + +         +  
Sbjct: 664 RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGI 723

Query: 190 QP-FFTDTSIDLFPPSESPLRNELAQSA--PTSAISDQSSISDGSPE---PTP-DTPHRR 249
            P F T  S    P S     +E+++    P   I     + +G  E   PT  +  H+ 
Sbjct: 724 IPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQP 783

Query: 250 STGVREPPIHLQDYHCFSTIISLV----EPTSYQEASTDP---LWQKAMNDELQALEKTH 309
                 P +  + Y   ST   L+    EP S +E  + P      KAM +E+++L+K  
Sbjct: 784 LRRSERPRVESRRYP--STEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNG 843

Query: 310 TWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARM 333
           T+  V+LP GKRP+ CKW++K+K   D  + RYKARLV KG+ Q+ GID++E F+ V +M
Sbjct: 844 TYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKM 903

[Close]

BLAST of Cmc04g0103581 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-20
Identity = 49/99 (49.49%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 232 EPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE 291
           EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 292 RYKARLVAKGYSQEYGIDYEETFALVARMTSLRSLLAVA 331
           R KARLVAKG+ QE GI + ET++ V R  ++R++L VA
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc04g0103581 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-15
Identity = 41/112 (36.61%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 218 LQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCK 277
           L  +  F+ + +  +   Y++  +   W++A+N EL A +  +TW     P  K  +  +
Sbjct: 881 LNAHTIFNDVPNSFDEIQYRDDKSS--WEEAINTELNAHKINNTWTITKRPENKNIVDSR 940

Query: 278 WIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRSLLAV 330
           W++ +K +  G   RYKARLVA+G++Q+Y IDYEETFA VAR++S R +L++
Sbjct: 941 WVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSL 990

[Close]

BLAST of Cmc04g0103581 vs. ExPASy TrEMBL
Match: A0A5D3BI36 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00360 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.4e-181
Identity = 320/369 (86.72%), Postives = 322/369 (87.26%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGR ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFGCA
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGF CWDPLSNRLRISRHVTFWEHTMFSRLS
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFHCWDPLSNRLRISRHVTFWEHTMFSRLS 580

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESPL NELAQSAPTSAISDQSSI D SPEPTPDTP 
Sbjct: 581 SFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSAISDQSSIPDDSPEPTPDTPP 640

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
            RST VREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV
Sbjct: 641 SRSTRVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 700

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 701 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRS 760

[Close]

BLAST of Cmc04g0103581 vs. ExPASy TrEMBL
Match: A0A5A7U9P9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00970 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 9.7e-181
Identity = 320/369 (86.72%), Postives = 322/369 (87.26%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGR ERKH HILD
Sbjct: 401 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRVERKHLHILD 460

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFGCA
Sbjct: 461 SVRALLLSASCPKKFWGEAALTSVYSINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 520

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGF CWDPLSNRLRISRHVTFWEHTMFSRLS
Sbjct: 521 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFHCWDPLSNRLRISRHVTFWEHTMFSRLS 580

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESPL NELAQSAPTSAISDQSSI D SPEPTPDTP 
Sbjct: 581 SFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSAISDQSSIPDDSPEPTPDTPP 640

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VREPPIHLQDYHCFSTIISLVE TSYQEASTDPLWQKAMNDELQALEKTHTWDYV
Sbjct: 641 RRSTRVREPPIHLQDYHCFSTIISLVELTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 700

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 701 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRS 760

[Close]

BLAST of Cmc04g0103581 vs. ExPASy TrEMBL
Match: A0A5A7VBA1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002020 PE=4 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 4.8e-180
Identity = 318/369 (86.18%), Postives = 324/369 (87.80%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGRAERKHRHILD
Sbjct: 1   MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 60

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFG A
Sbjct: 61  SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGYA 120

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS
Sbjct: 121 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESP+ NELAQSAPTSA S+QSSIS GSPEPTPDTP 
Sbjct: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPIGNELAQSAPTSATSNQSSISGGSPEPTPDTPP 240

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VREPPIHLQDYHCFSTIISLVEPTSYQEAS +P+WQKAMNDELQALEKTHTWDYV
Sbjct: 241 RRSTRVREPPIHLQDYHCFSTIISLVEPTSYQEASINPVWQKAMNDELQALEKTHTWDYV 300

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRS 360

[Close]

BLAST of Cmc04g0103581 vs. ExPASy TrEMBL
Match: A0A5A7TZC4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001220 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 7.0e-179
Identity = 316/369 (85.64%), Postives = 322/369 (87.26%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRTQFSCPIKTLRTDNALEYKDST LSFLSQQGTLVQRSC HTSQ+NGRAERKHRHILD
Sbjct: 481 MIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCAHTSQQNGRAERKHRHILD 540

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGTPPNYSNLKTFGCA
Sbjct: 541 SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 600

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRAR CCFLGYGTEHKGFRCWDPLSNRLR+SRH+TFWEHTMFSRLS
Sbjct: 601 CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRLSRHITFWEHTMFSRLS 660

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQ FFT+TSIDLFPPSESPL NELAQSAPTSA SDQSSISDGSPEPTPDTP 
Sbjct: 661 SFHTSFSSPQAFFTNTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPP 720

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VREPPIHLQDYH FSTIISLVEPTSYQEAST+PLWQKAMNDELQALEKTHTWDYV
Sbjct: 721 RRSTRVREPPIHLQDYHYFSTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYV 780

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKA LVAKGYSQEYGIDYEETFA VARMTS+RS
Sbjct: 781 DLPPGKRPIGCKWIYKIKTHSDGTIERYKAHLVAKGYSQEYGIDYEETFAPVARMTSVRS 840

[Close]

BLAST of Cmc04g0103581 vs. ExPASy TrEMBL
Match: A0A5A7SLT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G004960 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 3.8e-177
Identity = 316/369 (85.64%), Postives = 320/369 (86.72%), Query Frame = 0


Query: 1   MIRTQFSCPIKTLRTDNALEYKDSTFLSFLSQQGTLVQRSCPHTSQENGRAERKHRHILD 60
           MIRT+FSCPIKTLR DNALEYKDST LSFLSQQGTLVQRSCPHTSQ+NGRAERKHRHILD
Sbjct: 520 MIRTKFSCPIKTLRIDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 579

Query: 61  S-----------------------------------NISPFEKLYGTPPNYSNLKTFGCA 120
           S                                   NISPFEKLYGT PNYSNLKTFGCA
Sbjct: 580 SVRALLLSASCPEKFWGEAALTSVYTINHLSSSVLQNISPFEKLYGTHPNYSNLKTFGCA 639

Query: 121 CFVLLHPHEHTKLEPRARFCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS 180
           CFVLLHPHEHTKLEPRA  CCFLGYGTEHKGFRCWDPLSNRLRISRHV FWEHTMFSRLS
Sbjct: 640 CFVLLHPHEHTKLEPRACLCCFLGYGTEHKGFRCWDPLSNRLRISRHVPFWEHTMFSRLS 699

Query: 181 SFHTSFSSPQPFFTDTSIDLFPPSESPLRNELAQSAPTSAISDQSSISDGSPEPTPDTPH 240
           SFHTSFSSPQPFFTDTSIDLFPPSESPL NELAQSAPTSA SDQSSISDGSPEPTPDTP 
Sbjct: 700 SFHTSFSSPQPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPP 759

Query: 241 RRSTGVREPPIHLQDYHCFSTIISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYV 300
           RRST VRE PIHLQDYHCFSTIISLVEPTSYQEAST+PLWQKAMNDELQALEKTHTWDYV
Sbjct: 760 RRSTRVRELPIHLQDYHCFSTIISLVEPTSYQEASTNPLWQKAMNDELQALEKTHTWDYV 819

Query: 301 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRS 335
           DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGI YEE FALVARMTS+ S
Sbjct: 820 DLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIVYEEKFALVARMTSVCS 879

[Close]

BLAST of Cmc04g0103581 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-34
Identity = 78/183 (42.62%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 176 ELAQSAPTSAISDQSSISDGSPEPTPDTPHRRSTGVREPPIHLQDYHCFST--------- 235
           + + S+ +  I   ++I +  PEP+  T HRR+      P +LQDY+C S          
Sbjct: 6   DASTSSSSIDIMPSANIQNDVPEPSVHTSHRRT----RKPAYLQDYYCHSVASLTIHDIS 65

Query: 236 ------------------IISLVEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLP 295
                             I    EP++Y EA    +W  AM+DE+ A+E THTW+   LP
Sbjct: 66  QFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLP 125

Query: 296 PGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFALVARMTSLRSLLA 332
           P K+PIGCKW+YKIK +SDGTIERYKARLVAKGY+Q+ GID+ ETF+ V ++TS++ +LA
Sbjct: 126 PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILA 184

[Close]

BLAST of Cmc04g0103581 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-21
Identity = 49/99 (49.49%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 232 EPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE 291
           EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 292 RYKARLVAKGYSQEYGIDYEETFALVARMTSLRSLLAVA 331
           R KARLVAKG+ QE GI + ET++ V R  ++R++L VA
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc04g0103581 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98155.1	6.9e-181	86.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0050251.1	2.0e-180	86.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0064888.1	1.0e-179	86.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0047306.1	1.4e-178	85.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0031710.1	7.9e-177	85.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc04g0103581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	1.9e-40	29.07	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.5e-40	30.29	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	4.7e-39	31.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92520	2.2e-20	49.49	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	1.6e-15	36.61	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc04g0103581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI36	3.4e-181	86.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U9P9	9.7e-181	86.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VBA1	4.8e-180	86.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TZC4	7.0e-179	85.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SLT8	3.8e-177	85.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc04g0103581 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.6e-34	42.62	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.6e-21	49.49	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..96 e-value: 4.3E-12 score: 48.1
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 260..333 e-value: 2.3E-19 score: 69.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..212
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 212..331 coord: 64..151
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..108 score: 8.889731
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103581.1	Cmc04g0103581.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding