Cmc04g0103501 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103501
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr04: 20606240 .. 20606722 (+)
RNA-Seq Expression	Cmc04g0103501
Synteny	Cmc04g0103501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAATTGATTGACTTATTTTATACCTGTCTTGATATTTTCTTTGCTGTGAGTGTTGTCAGTCAGTTTATGCAGGCTCCCTATGAAGAACACATGGAAGCTATCAAAAGAATTTTGAGATACTTAAAAATGATACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAGAAAGACCATTGAAGCATATACTGACTCGGATTGGACAAGATCTGTTGTTGACAGAAAGTCTACCTCCGGTTATTGTACATTTGTTTGGGGCAATCTTGTAACTTGGAGGAGCAAGAAGAAAAGTGTTGAGGCCGAATATAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCCAGTATGATCTTCATCAGGAATATGAGACTACATTGAAGCTCTTTTGTGATAATATAGCCATTATTAGTATTGCTAACAACCCAGTTCAGCATGACAGAACTAAACATGTTGAGATTGATTGA

mRNA sequence

ATGAGTAAATTGATTGACTTATTTTATACCTGTCTTGATATTTTCTTTGCTGTGAGTGTTGTCAGTCAGTTTATGCAGGCTCCCTATGAAGAACACATGGAAGCTATCAAAAGAATTTTGAGATACTTAAAAATGATACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAGAAAGACCATTGAAGCATATACTGACTCGGATTGGACAAGATCTGTTGTTGACAGAAAGTCTACCTCCGGTTATTGTACATTTGTTTGGGGCAATCTTGTAACTTGGAGGAGCAAGAAGAAAAGTGTTGAGGCCGAATATAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCCAGTATGATCTTCATCAGGAATATGAGACTACATTGAAGCTCTTTTGTGATAATATAGCCATTATTAGTATTGCTAACAACCCAGTTCAGCATGACAGAACTAAACATGTTGAGATTGATTGA

Coding sequence (CDS)

ATGAGTAAATTGATTGACTTATTTTATACCTGTCTTGATATTTTCTTTGCTGTGAGTGTTGTCAGTCAGTTTATGCAGGCTCCCTATGAAGAACACATGGAAGCTATCAAAAGAATTTTGAGATACTTAAAAATGATACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAGAAAGACCATTGAAGCATATACTGACTCGGATTGGACAAGATCTGTTGTTGACAGAAAGTCTACCTCCGGTTATTGTACATTTGTTTGGGGCAATCTTGTAACTTGGAGGAGCAAGAAGAAAAGTGTTGAGGCCGAATATAGAGCTATGAGTTTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCCAGTATGATCTTCATCAGGAATATGAGACTACATTGAAGCTCTTTTGTGATAATATAGCCATTATTAGTATTGCTAACAACCCAGTTCAGCATGACAGAACTAAACATGTTGAGATTGATTGA

Protein sequence

MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID

Homology

[Close]

BLAST of Cmc04g0103501 vs. NCBI nr
Match: KAA0068106.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 18  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 77
           +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK
Sbjct: 506 ISQLNQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 565

Query: 78  STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 137
           STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD
Sbjct: 566 STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 625

Query: 138 NIAIISIANNPVQHDRTKHVEID 161
           NIAIISIANNPVQHDRTKHVEID
Sbjct: 626 NIAIISIANNPVQHDRTKHVEID 648

[Close]

BLAST of Cmc04g0103501 vs. NCBI nr
Match: TYK26089.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 18  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 77
           +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK
Sbjct: 473 ISQLNQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 532

Query: 78  STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 137
           STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD
Sbjct: 533 STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 592

Query: 138 NIAIISIANNPVQHDRTKHVEID 161
           NIAIISIANNPVQHDRTKHVEID
Sbjct: 593 NIAIISIANNPVQHDRTKHVEID 615

[Close]

BLAST of Cmc04g0103501 vs. NCBI nr
Match: KAA0035088.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 268.1 bits (684), Expect = 4.9e-68
Identity = 136/166 (81.93%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
           + KLI L +T  DI FAVSVVSQFMQAPYE+HME + RILRYLK  PGKGLMFRKT+RKT
Sbjct: 398 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEGVNRILRYLKNTPGKGLMFRKTNRKT 457

Query: 61  IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV------EAEYRAMSLGICEE 120
           IEAYTDSDWT SV+DRKSTSGYCTFVWGNLVTWRSKK+SV      EAEYRAMSLGICEE
Sbjct: 458 IEAYTDSDWTGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEE 517

Query: 121 IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
           IWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Sbjct: 518 IWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEID 563

[Close]

BLAST of Cmc04g0103501 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 6.5e-68
Identity = 136/166 (81.93%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1    MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
            + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 61   IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV------EAEYRAMSLGICEE 120
            IEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV      EAEYRAMSLGICEE
Sbjct: 1447 IEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEE 1506

Query: 121  IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
            IWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Sbjct: 1507 IWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEID 1552

[Close]

BLAST of Cmc04g0103501 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 6.5e-68
Identity = 136/166 (81.93%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1    MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
            + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 61   IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV------EAEYRAMSLGICEE 120
            IEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV      EAEYRAMSLGICEE
Sbjct: 1447 IEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEE 1506

Query: 121  IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
            IWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Sbjct: 1507 IWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEID 1552

[Close]

BLAST of Cmc04g0103501 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-24
Identity = 60/160 (37.50%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 7    LFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTD 66
            L +T  DI +AV+ +SQFM  P EEH++A+KRILRYL   P  G+  +K +  ++ AY+D
Sbjct: 1255 LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1314

Query: 67   SDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRAMSLGICEEIWLQKV 126
            +DW     D  ST+GY  ++  + ++W SKK+      S EAEYR+++    E  W+  +
Sbjct: 1315 ADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSL 1374

Query: 127  QYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
              +L         ++CDN+    +  NPV H R KH+ ID
Sbjct: 1375 LTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAID 1414

[Close]

BLAST of Cmc04g0103501 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 54/160 (33.75%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 7    LFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTD 66
            L +T  D+ +AV+ +SQ+M  P ++H  A+KR+LRYL   P  G+  +K +  ++ AY+D
Sbjct: 1238 LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSD 1297

Query: 67   SDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRAMSLGICEEIWLQKV 126
            +DW     D  ST+GY  ++  + ++W SKK+      S EAEYR+++    E  W+  +
Sbjct: 1298 ADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSL 1357

Query: 127  QYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
              +L  +      ++CDN+    +  NPV H R KH+ +D
Sbjct: 1358 LTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALD 1397

[Close]

BLAST of Cmc04g0103501 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 58/156 (37.18%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 13   DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRK--TDRKTIEAYTDSDWT 72
            D+  AV+++S++      E  + +KR+LRYLK      L+F+K       I  Y DSDW 
Sbjct: 1198 DLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWA 1257

Query: 73   RSVVDRKSTSGYCTFVWG-NLVTWRSKKK------SVEAEYRAMSLGICEEIWLQKVQYD 132
             S +DRKST+GY   ++  NL+ W +K++      S EAEY A+   + E +WL+ +   
Sbjct: 1258 GSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTS 1317

Query: 133  LHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEI 160
            ++ + E  +K++ DN   ISIANNP  H R KH++I
Sbjct: 1318 INIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDI 1353

[Close]

BLAST of Cmc04g0103501 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.5e-19
Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 0


Query: 13   DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRS 72
            DI  AV VVS+F++ P +EH EA+K ILRYL+   G  L F  +D   ++ YTD+D    
Sbjct: 1128 DIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGD 1187

Query: 73   VVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRAMSLGICEEIWLQKV--QYDL 132
            + +RKS++GY     G  ++W+SK +      + EAEY A +    E IWL++   +  L
Sbjct: 1188 IDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL 1247

Query: 133  HQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEI 160
            HQ+      ++CD+ + I ++ N + H RTKH+++
Sbjct: 1248 HQK---EYVVYCDSQSAIDLSKNSMYHARTKHIDV 1278

[Close]

BLAST of Cmc04g0103501 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 46/111 (41.44%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 13  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRS 72
           D+  AV V+SQF   P   H +A+KR+LRYL+     GL F +     +  Y+D+DW   
Sbjct: 23  DLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGD 82

Query: 73  VVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRAMSLGICEEIWL 118
           V  R+STSGY   + G  V+WRSKK+      S E EY A+S    E +WL
Sbjct: 83  VESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133

[Close]

BLAST of Cmc04g0103501 vs. ExPASy TrEMBL
Match: A0A5A7VNE8 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00640 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 18  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 77
           +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK
Sbjct: 506 ISQLNQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 565

Query: 78  STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 137
           STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD
Sbjct: 566 STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 625

Query: 138 NIAIISIANNPVQHDRTKHVEID 161
           NIAIISIANNPVQHDRTKHVEID
Sbjct: 626 NIAIISIANNPVQHDRTKHVEID 648

[Close]

BLAST of Cmc04g0103501 vs. ExPASy TrEMBL
Match: A0A5D3DRR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00520 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 18  VSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 77
           +S ++QFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK
Sbjct: 473 ISQLNQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRSVVDRK 532

Query: 78  STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 137
           STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD
Sbjct: 533 STSGYCTFVWGNLVTWRSKKKSVEAEYRAMSLGICEEIWLQKVQYDLHQEYETTLKLFCD 592

Query: 138 NIAIISIANNPVQHDRTKHVEID 161
           NIAIISIANNPVQHDRTKHVEID
Sbjct: 593 NIAIISIANNPVQHDRTKHVEID 615

[Close]

BLAST of Cmc04g0103501 vs. ExPASy TrEMBL
Match: A0A5A7SWV4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001620 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 136/166 (81.93%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
           + KLI L +T  DI FAVSVVSQFMQAPYE+HME + RILRYLK  PGKGLMFRKT+RKT
Sbjct: 398 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEGVNRILRYLKNTPGKGLMFRKTNRKT 457

Query: 61  IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV------EAEYRAMSLGICEE 120
           IEAYTDSDWT SV+DRKSTSGYCTFVWGNLVTWRSKK+SV      EAEYRAMSLGICEE
Sbjct: 458 IEAYTDSDWTGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEE 517

Query: 121 IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
           IWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Sbjct: 518 IWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEID 563

[Close]

BLAST of Cmc04g0103501 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 136/166 (81.93%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1    MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
            + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 61   IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV------EAEYRAMSLGICEE 120
            IEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV      EAEYRAMSLGICEE
Sbjct: 1447 IEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEE 1506

Query: 121  IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
            IWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Sbjct: 1507 IWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEID 1552

[Close]

BLAST of Cmc04g0103501 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 136/166 (81.93%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1    MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
            + KLI L +T  DI FAVSVVSQFMQAPYE+HMEA+ RILRYLK  PGKGLMFRKT+RKT
Sbjct: 1387 VGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKT 1446

Query: 61   IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKKSV------EAEYRAMSLGICEE 120
            IEAYTDSDW  SV+DRKSTSGYCTFVWGNLVTWRSKK+SV      EAEYRAMSLGICEE
Sbjct: 1447 IEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEE 1506

Query: 121  IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
            IWLQKV  DLHQE ET LKLFCDN A ISIANNPVQHDRTKHVEID
Sbjct: 1507 IWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEID 1552

[Close]

BLAST of Cmc04g0103501 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 66/166 (39.76%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 1   MSKLIDLFYTCLDIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKT 60
           + +L+ L  T LDI FAV+ +SQF +AP   H +A+ +IL Y+K   G+GL +       
Sbjct: 382 IGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 441

Query: 61  IEAYTDSDWTRSVVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRAMSLGICEE 120
           ++ ++D+ +      R+ST+GYC F+  +L++W+SKK+      S EAEYRA+S    E 
Sbjct: 442 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 501

Query: 121 IWLQKVQYDLHQEYETTLKLFCDNIAIISIANNPVQHDRTKHVEID 161
           +WL +   +L         LFCDN A I IA N V H+RTKH+E D
Sbjct: 502 MWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547

[Close]

BLAST of Cmc04g0103501 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 13  DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRS 72
           DI +AV++V Q M  P     + +KR+LRY+K     GL   K  +  ++A+ DSDW   
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175

Query: 73  VVDRKSTSGYCTFVWGNLVTWRSKKK------SVEAEYRAMSLGICEEIW 117
              R+ST+G+CTF+  N+++W +K++      S E EYRA++L   E  W
Sbjct: 176 TSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc04g0103501 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-09
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 13 DIFFAVSVVSQFMQAPYEEHMEAIKRILRYLKMIPGKGLMFRKTDRKTIEAYTDSDWTRS 72
          D+ FAV+ +SQF  A     M+A+ ++L Y+K   G+GL +  T    ++A+ DSDW   
Sbjct: 9  DLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASC 68

Query: 73 VVDRKSTSGYCTFV 87
             R+S +G+C+ V
Sbjct: 69 PDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc04g0103501 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068106.1	4.2e-75	97.20	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK26089.1	4.2e-75	97.20	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0035088.1	4.9e-68	81.93	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYJ99952.1	6.5e-68	81.93	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	6.5e-68	81.93	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0103501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.2e-24	37.50	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-22	33.75	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.0e-20	37.18	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	7.5e-19	36.77	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	1.3e-15	41.44	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc04g0103501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VNE8	2.0e-75	97.20	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DRR4	2.0e-75	97.20	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7SWV4	2.4e-68	81.93	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G00...	[more]
A0A5D3BJK7	3.1e-68	81.93	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	3.1e-68	81.93	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]

BLAST of Cmc04g0103501 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.1e-28	39.76	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.2e-16	37.27	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	5.5e-09	36.49	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 9..87
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 9..87
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 62..160 e-value: 7.62662E-44 score: 139.526

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103501.1	Cmc04g0103501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding