Cmc04g0103231 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0103231
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 20268683 .. 20273599 (+)
RNA-Seq Expression	Cmc04g0103231
Synteny	Cmc04g0103231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAAGCAGGAATATAATTATGTAACATTCGCATTGGACAAATACAAATGGAAGAAAAATCGTTCTTTCTTGGGCGATGGGAACAATATCTTAACATTGTCAACCTTGATGGACCCATCCTCACAAAAGCATCCGAAGCACCATTATTGTCATGACACAACCATTGTAAGTTCCCTCGTGACTTTAGAACTTTGCTTTTCTTGTATCTATTTCTCATTGAATTAAAAACATATGTGTCTACATGTAAAGGGGATGAAAAAAGCATTGATTAGGTGGTTAAAAGGAAAAAAAGAAAACCCATTCTCTTTTACTTTTTAGAATTTTACCTTCTTTTTCCATTCACGAAAGATTTGTCTGAGGCTAAAATAAGCCTAGCTTAACAATATGTTTTAAAATGGATACAACTCAACTAACATCAAGTTAGAAGTTCAATCATTCACCTCAAAATAAAAAAAATAAAAAAAAAAGAAGGAAAGAAAAGAAAGTTAGGACATGTGTCTAATTTGCAGCTTCTGTTGGAAAGACATGCTCTCTCAAGTACCCTTAATCGGTGGTTGCATTGTCATGATGTTGTTCCTTTTTTATCCCTCAAAAGTCCTATTCCTACACTATAACACAACAACCCTACTTCCATGGGGATTTACTTTAGGCTCTGAGTTATGGATGTATCCATTCCATTAATAATTTTTTTACTAAATTTGGTTAACTCTTTCATGTGTTTAATTTTTTAAATAAGTCATTTTTTAAAAGAAATTCAAGATTTTTGGCAACCATGCTAAATAATTTTTCAAAGAACCTAAAAGTTATCTTCATCTTTAATGTTTAAATGAAAATAACTTTTTGAAAAATATTTTTTTTAATCAATACAAATAGATTCTTAGCATTAAGCTATGATTAAAAATATTTTTCAAAGTAGGGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAAAACAAAATTGAAAACCAAGGACTGTTAATTGAAGCGTGTGTATAATTCTAAAAATGTAATAAATCTTTGAGCTGTCAATCGTGTTCATTAGACTTCGAACATTTAAAAGTTGTATAATTAATTGATCATCATAAATTGGATCTTATAGATTGAATTTGTGTGTAGATATGTGAAAATTTTTAAAATATCGCAAATAGGTCACTAACAACAAAAATTCATTTGTTAATTTTTTTAAATAAAAAAATCATAAATATATCAAGTCTATTAAATACAAAATTCATACGGTAGGACTTATTAAATACATTTCAAATCCCTAATGAGATTTATGAAACAAGTAGGTAAGTTTAAGACCAAAATAAATCGAAATTGAACTATATCAAACAAACCATATAATTTAACCATATAGTTTATATAATTTAACCACATACTTTATAGGCCATGACACAAGGTCATGTTTTGTTTTAAATTTTGAACCAAGTTTGACCATCGTTGAAAATGAAAGATTTATCCTCCCATTTTTATTTTAGTTTTAAAATGTTGGTTCTGCCACTTTTATGTAATATATATTTAGATAAGTTTGTTTTATATGTCGAGATGCAATCTCTTGCGAGGGTGTGATGACCACAAACGTGCCTCATTTTTGACTTTACAAGTCTGACCTTTTCTTTCCTTCTGTTTTTTCTCTTTTTTGTTTTTTCCTTTCTTAAAAGTCTACTTTCGCTTCGTTCTTTTCTTTTTATAGTATTTGGTTTTATTGGTAGATACAATCTCTATTTCAATTCATTTGATAGCAACTGCATATTCAATATCTTGTTTTTTAAACTTTGGTCCGTAACCATTTTGTTTTAAAAAATTATACCTATTTTCATCTTCAAAATTTTTCTTTTTTTTTTTTTTATCATTTGTTTAAAAAATCAATCCGATATTTGAAATAAATAGCTATAAGAACTTATTTTTTAGGAGTTTAGTTAAGAATACGATCATTGTGTTTAAGAAGTATGCAAATAATTGTAAAAATTGACCAGAAAATAGGATTATTTTTCAAAAGCAAAAAAAGAAAAAAAAGGAAAAAAAAAAAAAAACAAAATGATTTATTTTTCAATGACTAAAAACAAAATGATCACCTAACAAAGGCAGTAATTTTTGCAATGTAGCTTAGTTTCTTAAATGATTTATAAAAGATGGATAACAAAGTAAAAAAATTTGGATTGGTTTTTTAAAATATTGTTGTATAAGGGGACAAGAAAACAAATAAACAAATAATATGGAGAAGTTTAATTTGAAAAAAGTAAAGACCAAAAATCAAAATTTGATATTAAATAGCTTCTAATGTGGGCTTTTGTATTTTTCAAGTTGAGTCAAATGAAATTAAAAAGTCAGAAACTTAGAAAAACAGCATCACCACAATTTGCTTGGAATAGTTGTAGGTTCCAATCATTACTTAGTCATACCAGTTCATAAATTTTGTGAACACTTCTTATTGCTTAGAGAAGAAATAAAATAATTTTGCATTATTTTGTAATGAAATTAGTATGATTTAATAAATTGTGATTAAATAAATAAATATGATAACTTTAGGGGTGATTGAAGTCGTAAATCAATTTCATCCCTCAATTAGTTAGTTCGTAATAATGAAAAGGCAAAAGTGAAGGGTTGGTTGTTAACTCAACAAACAAAGGCTAAAATTACTGCTAATTGAGCATTTTAATTTGAAGTTTTGGGTTAAGTTGATAATTATATCTCATCAACTTCAAAAGAGAGACAAAATTATGGTAATGATATTGTTCTTAATTTACGGGTTTGCCATCTGGATAATCATCATACTCATTTCAATTATATATTAATTCTTCTTAATTTTAAGCCCGTCGATTTATCAATCATTCCACAATTTTAGCCTTTTATTCTAACAAGTTACAATTTGGAGTTGTTTGGTGTTACAACATTTTTTCCCCTAATTATATTTACTAGCAACTTTTAGGAAGTGGGTAAATTCTAAAATTTTAACTTTACAAACTTGAATAGTAATTCCATCTTCATTTTTTTTTTTTTTTGGTCTCTGCAAGAACTAAATTGATTTATTTACATAATGTTATCTATGTAACATAACTCATCACGATGACAAATAACGTAGCAAAGATTATATCTTTCTATGATAAGCAACTTAAAAAATGAAGAACAAAATAAAGAAAGGCATATGAGAAGTTAAAAGGTTGGCACAAGTAGAATCAGATATTATCGATAACAATGGCAACGAGAGAGAGAATGAAATAAAATAAAATAAAGTAAAAGGAGTTTGGTTAATAAGATATTATAATAATAATAGACAGACAAAAGTTTGTAAAAGTCTGCCATTTTCTTTCCATTCTTCATTCTTCTGCTTCCTCTTCTTCTCTTTCTCTCTCTGTTTCAGTCTGTTTCCTTTATTCACGCCGCTTTCTCTCTCAATTCTCAAAACACTTTCTTTTTCTTTCCCCTCCATTCCCACCATCGCCATTGTTATAGAGCTTCAACAAAACTCTGAGAGAAAACAAAAAGAAGGGCATTTAACAATGTCTCAAGTTTCCATCCCCAAGAAAGGATTTGGACTGTCCTGTGTTTCTCATTTGTTTCATTTCTTCTTCTTTCTCCTCTCTCACCCTCTTTATTTCTCTTACTTCATCTTCTTCTTCCCTTACTTTCTTAAACTTCTTTCCTTTCTTTCTCCTCTCTTCATCACCACTTTCCTCCTCCTCTTTGCTTTCTTCTCTCTCTTTTTCCCTTCTGACCACCATCATCATCTTCATCAATTTCCTGATTTTTCCAAGATGGGCTTTCTTTCTACTACTTACCAAATTATTTTTGACAGTTTGAGAACAAGAACACCAGAGGAGATCCATGGATTCCCCCCCATCGAAGAGCTTGAAGCTTATAAAATCGTCTTTGAAACTTACACTTTTGGTGGCTCTGAACAAATCCCGTATAGGGGGGATGACAATCCAGAACTTGAAGTTGATTTTCAAGAACCCATGGAGAATTTCCCTCAGGAAACCCAAATTCTCCCGGATGAAACTGAAGCAAAAACAGAGGAACCAAAAGAAGCCCAAATCGAAAACAGAGAGAATGAAATGATGAAAGATTTGAGGAAAATGGCAGAAGAATCATCAATATCTTCAAGAACAGAATCGAGTCCATGGAGTTCGCCAGGGAGTTTCAGTAGTAGAGAGTATAATAGTAGTTATACATTAGGAAGTTATGGATCGATGAGGAAAGAGAAAGAATGGCGAAGAACACTTGCTTGTAAGCTGTTTGAAGAACGGCATAATTCAGAAGGAACAGAAGGAATGGATTCATTATGGGAAACATATGAGAATAGTGAATCAAAGAACTTACAGAAGAAAGAGAAAATGAATGGAAAATTGAAGAAAGGAAAGAAAATTCAAAAGAAAACCGATGATGACGATGACGAAGAAGAAGATGGAGAAGGGCAACTTTGTTGTTTACAAGCATTGAAATTCTCAGCAGGGAAGATGAATTTGGGAATGGGAAAACCAAATCTTTTGAAAATGACTAAAGCTTTGAAGGGATTTGGATGGTTGAACAGAAATGGAAGTAGAAAGAGATTGATCCATTCATGAATTGTTGCTAATTTATTTTACATTTCTTCTATGTTCTTCATCATCCTAATTCTCTATTTTTTTCTTCTCTTTGTTGGTCTGGTTTTTTTTTTCTCTTGGATTCAACTGTTCAAATAGTGAAAGTAAATATTTTGGTTATGGTTGCTAATTGTAGATCTATCTAATCTTAACCCATTTCACCTCTTTTAATAATCTTTTTTTACCTTTATGAGTCTTTGTTTTTGTGTTTCTCTTTTGTTGCTTTGGAATCGCTCATCATATGTGATGGTAGAGTGATGTTCAATCTACATTTCTTTTTTCCTTAATCTCTGTCTTTTCATTCTTAGATAAGAATATATGGTT

mRNA sequence

GACAAGCAGGAATATAATTATGTAACATTCGCATTGGACAAATACAAATGGAAGAAAAATCGTTCTTTCTTGGGCGATGGGAACAATATCTTAACATTGTCAACCTTGATGGACCCATCCTCACAAAAGCATCCGAAGCACCATTATTGTCATGACACAACCATTTTTGAGAACAAGAACACCAGAGGAGATCCATGGATTCCCCCCCATCGAAGAGCTTGAAGCTTATAAAATCGTCTTTGAAACTTACACTTTTGGTGGCTCTGAACAAATCCCGTATAGGGGGGATGACAATCCAGAACTTGAAGTTGATTTTCAAGAACCCATGGAGAATTTCCCTCAGGAAACCCAAATTCTCCCGGATGAAACTGAAGCAAAAACAGAGGAACCAAAAGAAGCCCAAATCGAAAACAGAGAGAATGAAATGATGAAAGATTTGAGGAAAATGGCAGAAGAATCATCAATATCTTCAAGAACAGAATCGAGTCCATGGAGTTCGCCAGGGAGTTTCAGTAGTAGAGAGTATAATAGTAGTTATACATTAGGAAGTTATGGATCGATGAGGAAAGAGAAAGAATGGCGAAGAACACTTGCTTGTAAGCTGTTTGAAGAACGGCATAATTCAGAAGGAACAGAAGGAATGGATTCATTATGGGAAACATATGAGAATAGTGAATCAAAGAACTTACAGAAGAAAGAGAAAATGAATGGAAAATTGAAGAAAGGAAAGAAAATTCAAAAGAAAACCGATGATGACGATGACGAAGAAGAAGATGGAGAAGGGCAACTTTGTTGTTTACAAGCATTGAAATTCTCAGCAGGGAAGATGAATTTGGGAATGGGAAAACCAAATCTTTTGAAAATGACTAAAGCTTTGAAGGGATTTGGATGGTTGAACAGAAATGGAAGTAGAAAGAGATTGATCCATTCATGAATTGTTGCTAATTTATTTTACATTTCTTCTATGTTCTTCATCATCCTAATTCTCTATTTTTTTCTTCTCTTTGTTGGTCTGGTTTTTTTTTTCTCTTGGATTCAACTGTTCAAATAGTGAAAGTAAATATTTTGGTTATGGTTGCTAATTGTAGATCTATCTAATCTTAACCCATTTCACCTCTTTTAATAATCTTTTTTTACCTTTATGAGTCTTTGTTTTTGTGTTTCTCTTTTGTTGCTTTGGAATCGCTCATCATATGTGATGGTAGAGTGATGTTCAATCTACATTTCTTTTTTCCTTAATCTCTGTCTTTTCATTCTTAGATAAGAATATATGGTT

Coding sequence (CDS)

ATGACACAACCATTTTTGAGAACAAGAACACCAGAGGAGATCCATGGATTCCCCCCCATCGAAGAGCTTGAAGCTTATAAAATCGTCTTTGAAACTTACACTTTTGGTGGCTCTGAACAAATCCCGTATAGGGGGGATGACAATCCAGAACTTGAAGTTGATTTTCAAGAACCCATGGAGAATTTCCCTCAGGAAACCCAAATTCTCCCGGATGAAACTGAAGCAAAAACAGAGGAACCAAAAGAAGCCCAAATCGAAAACAGAGAGAATGAAATGATGAAAGATTTGAGGAAAATGGCAGAAGAATCATCAATATCTTCAAGAACAGAATCGAGTCCATGGAGTTCGCCAGGGAGTTTCAGTAGTAGAGAGTATAATAGTAGTTATACATTAGGAAGTTATGGATCGATGAGGAAAGAGAAAGAATGGCGAAGAACACTTGCTTGTAAGCTGTTTGAAGAACGGCATAATTCAGAAGGAACAGAAGGAATGGATTCATTATGGGAAACATATGAGAATAGTGAATCAAAGAACTTACAGAAGAAAGAGAAAATGAATGGAAAATTGAAGAAAGGAAAGAAAATTCAAAAGAAAACCGATGATGACGATGACGAAGAAGAAGATGGAGAAGGGCAACTTTGTTGTTTACAAGCATTGAAATTCTCAGCAGGGAAGATGAATTTGGGAATGGGAAAACCAAATCTTTTGAAAATGACTAAAGCTTTGAAGGGATTTGGATGGTTGAACAGAAATGGAAGTAGAAAGAGATTGATCCATTCATGA

Protein sequence

MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQETQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKMNGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGFGWLNRNGSRKRLIHS

Homology

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BLAST of Cmc04g0103231 vs. NCBI nr
Match: XP_016902526.1 (PREDICTED: uncharacterized protein LOC103499217 [Cucumis melo])

HSP 1 Score: 502.7 bits (1293), Expect = 1.9e-138
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME 60
           MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME
Sbjct: 1   MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME 60

Query: 61  NFPQETQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF 120
           NFPQETQILPDETEAKTEE KEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF
Sbjct: 61  NFPQETQILPDETEAKTEESKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF 120

Query: 121 SSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ 180
           SSREYNS+YTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ
Sbjct: 121 SSREYNSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ 180

Query: 181 KKEKMNGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTK 240
           KKEKMNGKLKKGKKIQKKTDDDD+EEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTK
Sbjct: 181 KKEKMNGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTK 240

Query: 241 ALKGFGWLNRNGSRKRLIHS 261
           ALKGFGWLNRNGSRKRLIHS
Sbjct: 241 ALKGFGWLNRNGSRKRLIHS 260

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BLAST of Cmc04g0103231 vs. NCBI nr
Match: KAA0068077.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK26061.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 4.5e-135
Identity = 252/255 (98.82%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 6   LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE 65
           LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE
Sbjct: 15  LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE 74

Query: 66  TQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY 125
           TQILPDETEAKTEE KEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY
Sbjct: 75  TQILPDETEAKTEESKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY 134

Query: 126 NSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM 185
           NS+YTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM
Sbjct: 135 NSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM 194

Query: 186 NGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGF 245
           NGKLKKGKKIQKKTDDDD+EEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGF
Sbjct: 195 NGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGF 254

Query: 246 GWLNRNGSRKRLIHS 261
           GWLNRNGSRKRLIHS
Sbjct: 255 GWLNRNGSRKRLIHS 269

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BLAST of Cmc04g0103231 vs. NCBI nr
Match: XP_004144391.1 (uncharacterized protein LOC101214978 [Cucumis sativus])

HSP 1 Score: 468.8 bits (1205), Expect = 3.1e-128
Identity = 243/256 (94.92%), Postives = 248/256 (96.88%), Query Frame = 0


Query: 6   LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE 65
           LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPY GDDNPELEVDFQE MENFPQE
Sbjct: 102 LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYGGDDNPELEVDFQESMENFPQE 161

Query: 66  TQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY 125
           TQILPDETEAKTEE KEAQI NRENEMMKDLRK+ EESSISSRTESSPWSSPGSFSSREY
Sbjct: 162 TQILPDETEAKTEESKEAQIGNRENEMMKDLRKLTEESSISSRTESSPWSSPGSFSSREY 221

Query: 126 NSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM 185
           N++YTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM
Sbjct: 222 NNNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM 281

Query: 186 NGKLKKGKKIQKKTDDDDDEEEDGE-GQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKG 245
           NGK  KGKKIQKKTDDDD+EEEDGE GQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKG
Sbjct: 282 NGKSTKGKKIQKKTDDDDEEEEDGEQGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKG 341

Query: 246 FGWLNRNGSRKRLIHS 261
           FGWLNRNGSRK+LIHS
Sbjct: 342 FGWLNRNGSRKKLIHS 357

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BLAST of Cmc04g0103231 vs. NCBI nr
Match: XP_038887002.1 (stress response protein NST1 [Benincasa hispida])

HSP 1 Score: 375.9 bits (964), Expect = 2.7e-100
Identity = 217/281 (77.22%), Postives = 232/281 (82.56%), Query Frame = 0


Query: 6   LRTRTPEEIHGF-PPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEV--DFQEPMENF 65
           LR RTPEE  GF PP+EELEAYKIVFETYTF GSEQ PY  DD+PE+EV  DFQEPMENF
Sbjct: 108 LRPRTPEETDGFSPPMEELEAYKIVFETYTF-GSEQTPYGDDDDPEVEVEADFQEPMENF 167

Query: 66  PQETQILPDE-----TEAKTEEPKEAQIEN------------------RENEMMKDLRKM 125
           P+E QIL +       E KTEE KEAQIEN                   ENEMMKDLRK+
Sbjct: 168 PEEIQILQENPLLVGIETKTEELKEAQIENGDENRDVSRDETRDSSKAMENEMMKDLRKI 227

Query: 126 AEESSISSRTESSPWSSPGSFSSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSE 185
            EESSISSRTESSPWSSPGSFSSREYNS   LGSYGSMRKEKEWRRTLACKLFEERHNSE
Sbjct: 228 TEESSISSRTESSPWSSPGSFSSREYNS---LGSYGSMRKEKEWRRTLACKLFEERHNSE 287

Query: 186 GTEGMDSLWETYENSESKNLQKKEKMNGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQAL 245
           GTEGMDSLWETYE SESK LQK+ K+NGKLKKGKKIQKK +++D+EEEDGEGQLCCLQAL
Sbjct: 288 GTEGMDSLWETYEKSESKKLQKEVKINGKLKKGKKIQKK-EEEDEEEEDGEGQLCCLQAL 347

Query: 246 KFSAGKMNLGMGKPNLLKMTKALKGFGWLNRNGSRK-RLIH 260
           KFSAGKMNLGMG+PNLLKMTKALKGFGWL+RNGSR+ RLIH
Sbjct: 348 KFSAGKMNLGMGRPNLLKMTKALKGFGWLSRNGSRRNRLIH 383

[Close]

BLAST of Cmc04g0103231 vs. NCBI nr
Match: KAG7036245.1 (hypothetical protein SDJN02_03047, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 7.2e-85
Identity = 190/275 (69.09%), Postives = 215/275 (78.18%), Query Frame = 0


Query: 6   LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNP------ELEVDFQEPM 65
           LR RTPEEI  F P+EELEAYKIVFETYTF G+EQ  Y G+D+       E+EVD +E M
Sbjct: 104 LRPRTPEEIDEFRPMEELEAYKIVFETYTF-GTEQNLYGGEDSELNVPEVEVEVDCEESM 163

Query: 66  ENFPQETQILPD-----ETEAKT---EEPKEAQIENR------ENEMMKDLRKMAEESSI 125
           ENFP + +  P+     E EAKT   EE  E + E R      ENEMMK+LRK+ EESSI
Sbjct: 164 ENFPGKMEFSPENPLAYENEAKTGECEEKNEKKEEIRDSSKAIENEMMKELRKLTEESSI 223

Query: 126 SSRTESSPWSSPGSFSSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMD 185
           SSR+ESSPWSSPGSFS       Y+LGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMD
Sbjct: 224 SSRSESSPWSSPGSFS-----RDYSLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMD 283

Query: 186 SLWETYENSESKNLQKKEKMNGKLKKGKKIQ-KKTDDDDDEEEDGEGQLCCLQALKFSAG 245
           SLWETYE SE   LQK EK+NGK KKGKKI+ K+ D+D+DE ED EGQLCCLQALKFSAG
Sbjct: 284 SLWETYEKSEWNTLQKNEKINGKSKKGKKIKGKEEDEDEDEYEDREGQLCCLQALKFSAG 343

Query: 246 KMNLGMGKPNLLKMTKALKGFGWLNRNGSRKRLIH 260
           KMNLGMG+PNL+KM+KALKGFGWL+R+GSRKR +H
Sbjct: 344 KMNLGMGRPNLVKMSKALKGFGWLSRHGSRKRSVH 372

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BLAST of Cmc04g0103231 vs. ExPASy TrEMBL
Match: A0A1S4E2S0 (uncharacterized protein LOC103499217 OS=Cucumis melo OX=3656 GN=LOC103499217 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.4e-139
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME 60
           MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME
Sbjct: 1   MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME 60

Query: 61  NFPQETQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF 120
           NFPQETQILPDETEAKTEE KEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF
Sbjct: 61  NFPQETQILPDETEAKTEESKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF 120

Query: 121 SSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ 180
           SSREYNS+YTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ
Sbjct: 121 SSREYNSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ 180

Query: 181 KKEKMNGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTK 240
           KKEKMNGKLKKGKKIQKKTDDDD+EEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTK
Sbjct: 181 KKEKMNGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTK 240

Query: 241 ALKGFGWLNRNGSRKRLIHS 261
           ALKGFGWLNRNGSRKRLIHS
Sbjct: 241 ALKGFGWLNRNGSRKRLIHS 260

[Close]

BLAST of Cmc04g0103231 vs. ExPASy TrEMBL
Match: A0A5D3DQW2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00160 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 252/255 (98.82%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 6   LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE 65
           LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE
Sbjct: 15  LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPMENFPQE 74

Query: 66  TQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY 125
           TQILPDETEAKTEE KEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY
Sbjct: 75  TQILPDETEAKTEESKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSFSSREY 134

Query: 126 NSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM 185
           NS+YTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM
Sbjct: 135 NSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQKKEKM 194

Query: 186 NGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGF 245
           NGKLKKGKKIQKKTDDDD+EEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGF
Sbjct: 195 NGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGF 254

Query: 246 GWLNRNGSRKRLIHS 261
           GWLNRNGSRKRLIHS
Sbjct: 255 GWLNRNGSRKRLIHS 269

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BLAST of Cmc04g0103231 vs. ExPASy TrEMBL
Match: A0A0A0L955 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G632280 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.5e-131
Identity = 247/261 (94.64%), Postives = 252/261 (96.55%), Query Frame = 0


Query: 1   MTQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGDDNPELEVDFQEPME 60
           MTQ FLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPY GDDNPELEVDFQE ME
Sbjct: 1   MTQAFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYGGDDNPELEVDFQESME 60

Query: 61  NFPQETQILPDETEAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPWSSPGSF 120
           NFPQETQILPDETEAKTEE KEAQI NRENEMMKDLRK+ EESSISSRTESSPWSSPGSF
Sbjct: 61  NFPQETQILPDETEAKTEESKEAQIGNRENEMMKDLRKLTEESSISSRTESSPWSSPGSF 120

Query: 121 SSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ 180
           SSREYN++YTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ
Sbjct: 121 SSREYNNNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSESKNLQ 180

Query: 181 KKEKMNGKLKKGKKIQKKTDDDDDEEEDGE-GQLCCLQALKFSAGKMNLGMGKPNLLKMT 240
           KKEKMNGK  KGKKIQKKTDDDD+EEEDGE GQLCCLQALKFSAGKMNLGMGKPNLLKMT
Sbjct: 181 KKEKMNGKSTKGKKIQKKTDDDDEEEEDGEQGQLCCLQALKFSAGKMNLGMGKPNLLKMT 240

Query: 241 KALKGFGWLNRNGSRKRLIHS 261
           KALKGFGWLNRNGSRK+LIHS
Sbjct: 241 KALKGFGWLNRNGSRKKLIHS 261

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BLAST of Cmc04g0103231 vs. ExPASy TrEMBL
Match: A0A6J1HI04 (uncharacterized protein LOC111463823 OS=Cucurbita moschata OX=3662 GN=LOC111463823 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.3e-71
Identity = 173/264 (65.53%), Postives = 200/264 (75.76%), Query Frame = 0


Query: 6   LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGD-DNPELEVDFQEPMENFPQ 65
           LR RTP+E     P+EELEAYKIVFE YTF GSEQ PY       E+EVDFQEPME+FP+
Sbjct: 99  LRPRTPDE----SPMEELEAYKIVFEAYTF-GSEQNPYEHSLQEVEVEVDFQEPMEHFPE 158

Query: 66  ETQILPD------ETEAKTEEPKEAQIENRE--NEMMKDLRKMAEESSISSRTESS-PWS 125
           + + LP+      E EAKTEE +EA+ ENR+  +E+M DL+    ESS SSR+ESS PWS
Sbjct: 159 KIKTLPENPLIIAEVEAKTEELQEAKFENRDEKHEIMNDLK----ESSSSSRSESSPPWS 218

Query: 126 SPGSFSSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSE 185
           SPGSF  R+Y+S   LGSYGSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWETYE   
Sbjct: 219 SPGSF-GRDYSS---LGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYE--- 278

Query: 186 SKNLQKKEKMNGKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKFSAGKMNLGMGKPNL 245
                KKEK N K        KK +++++EEE+ EGQLCCLQALKFSAGKMNLGM +PNL
Sbjct: 279 -----KKEKDNRK-------SKKEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNL 334

Query: 246 LKMTKALKGFGWLNRNGSRKRLIH 260
           +KMTKALKGFGWL+R GSRKRLIH
Sbjct: 339 MKMTKALKGFGWLSRKGSRKRLIH 334

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BLAST of Cmc04g0103231 vs. ExPASy TrEMBL
Match: A0A6J1E4P5 (uncharacterized protein LOC111026037 OS=Momordica charantia OX=3673 GN=LOC111026037 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.4e-70
Identity = 172/278 (61.87%), Postives = 200/278 (71.94%), Query Frame = 0


Query: 6   LRTRTPEEIHGF---PPIEELEAYKIVFETYTFG---GSEQIPYRGD--DNPELE--VDF 65
           LR RTP+E+  F   P  EELEAY IVFETYTFG    +E+ PY G   D PE+E  VD 
Sbjct: 87  LRPRTPDEVDEFRFRPLEEELEAYNIVFETYTFGIGTEAEENPYGGGHADVPEVEVKVDC 146

Query: 66  QEPMENFPQETQILPDE--TEAKTEEP-------KEAQIENRENEMMKDLRKMAEESSIS 125
           +EP+ NFP+  +ILP+      KTEE        KE + ++ ENE M   +   ++SSIS
Sbjct: 147 EEPVVNFPETIKILPENPVPYEKTEEKEIIEDLRKELREDSGENEEMIGKQPTDQDSSIS 206

Query: 126 SRTESSPWSSPGSFSSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDS 185
           SR+ESSPWSSPGSF  REY+S   LGSYGSMRKEKEWRRTLACKLFEERHN+EG+EGMDS
Sbjct: 207 SRSESSPWSSPGSF-GREYSS---LGSYGSMRKEKEWRRTLACKLFEERHNAEGSEGMDS 266

Query: 186 LWETYENSESKNLQKKEKMN-----GKLKKGKKIQKKTDDDDDEEEDGEGQLCCLQALKF 245
           LWETYE SESK  QK E         K K+GKK Q++ D+D D     EGQLCCLQALKF
Sbjct: 267 LWETYEKSESKQSQKTENQKQKQKLSKAKRGKKFQEEEDEDGD-----EGQLCCLQALKF 326

Query: 246 SAGKMNLGMGKPNLLKMTKALKGFGWLNRNGSRKRLIH 260
           SAGKMNLGMG+PNL+KM+KA KGFGWLNR+GSRK LIH
Sbjct: 327 SAGKMNLGMGRPNLVKMSKAFKGFGWLNRHGSRKALIH 355

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BLAST of Cmc04g0103231 vs. TAIR 10
Match: AT3G25130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 105/290 (36.21%), Postives = 153/290 (52.76%), Query Frame = 0


Query: 16  GFPPIEELEAYKIVFETYTFGGSEQIPYRGDD--------NPELEVDFQEPMENFPQETQ 75
           GF  +EELEAYK+V E  +   + +     D+        + E  V      E   ++ +
Sbjct: 117 GFKSLEELEAYKMVVEACSMECASENEICSDELTFVDKFCSHESTVSESLTDETLEEQVE 176

Query: 76  ILP------------DET-EAKTEEPKEAQIENRENEMMKDLRKMAEESSISSRTESSPW 135
           I P            +ET + + EE +E +++++ + ++ +  +  +E S + + +    
Sbjct: 177 IQPLKFEDVIVLEKEEETKKCEKEEVEEQKVKHKSDVVLDNREEPTKEESKAQKVDLVGD 236

Query: 136 SSPGSF-------------------SSREYNSSYTLGSYGSMRKEKEWRRTLACKLFEER 195
           S+  S+                   +  E   + +L S+GSMRKEKEWRRTLACKLFEER
Sbjct: 237 SNNESYDLPKLSNFLGEGEGKRNVVTKNEEEDNVSLQSFGSMRKEKEWRRTLACKLFEER 296

Query: 196 HNSEGTEGMDSLWETYENSESKNLQKKEKMNGKLKKGKKIQKKTDDDDD----EEEDGEG 255
           HN++  +GMD LWETYE    K  Q +E+   KLKK  K   KT   +     EEED +G
Sbjct: 297 HNADVGQGMDQLWETYETQTEKKQQTEEEKK-KLKKKTKSMMKTKSIEKEVIVEEEDDDG 356

Query: 256 ----QLCCLQALKFSAGKMNLGMGKPNLLKMTKALKGFG-WLNRNGSRKR 257
               QLCCLQALKFS GKM+LG+ +PNLLK++KA KG G + N N   K+
Sbjct: 357 IDHQQLCCLQALKFSTGKMHLGIARPNLLKLSKAFKGIGRFYNANKHSKK 405

The following BLAST results are available for this feature:

BLAST of Cmc04g0103231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902526.1	1.9e-138	98.85	PREDICTED: uncharacterized protein LOC103499217 [Cucumis melo]	[more]
KAA0068077.1	4.5e-135	98.82	reverse transcriptase [Cucumis melo var. makuwa] >TYK26061.1 reverse transcripta...	[more]
XP_004144391.1	3.1e-128	94.92	uncharacterized protein LOC101214978 [Cucumis sativus]	[more]
XP_038887002.1	2.7e-100	77.22	stress response protein NST1 [Benincasa hispida]	[more]
KAG7036245.1	7.2e-85	69.09	hypothetical protein SDJN02_03047, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cmc04g0103231 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0103231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E2S0	9.4e-139	98.85	uncharacterized protein LOC103499217 OS=Cucumis melo OX=3656 GN=LOC103499217 PE=...	[more]
A0A5D3DQW2	2.2e-135	98.82	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A0A0L955	5.5e-131	94.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G632280 PE=4 SV=1	[more]
A0A6J1HI04	1.3e-71	65.53	uncharacterized protein LOC111463823 OS=Cucurbita moschata OX=3662 GN=LOC1114638...	[more]
A0A6J1E4P5	2.4e-70	61.87	uncharacterized protein LOC111026037 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of Cmc04g0103231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25130.1	1.6e-29	36.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..127
None	No IPR available	PANTHER	PTHR36760:SF1	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY B PROTEIN	coord: 75..256
None	No IPR available	PANTHER	PTHR36760	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY B PROTEIN	coord: 75..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0103231.1	Cmc04g0103231.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003964	RNA-directed DNA polymerase activity