Cmc04g0099941 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0099941
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DNA repair protein RadA
Location	CMiso1.1chr04: 15808722 .. 15817118 (-)
RNA-Seq Expression	Cmc04g0099941
Synteny	Cmc04g0099941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACAATAAAAGGAAGCTCGGGAATTCGAACCGTGTGTTTGCTGCAATGGAAATTGGCGGGGGATTATTCCTTAAATCCTTCATCGTCTTCCTAAAACCCTCAAACTCTCTTCGATGCAGCTCTTAGACATGAAGTCCCTCAGAACTATTTTCTATTCTCGAAAGCACTTTCTCATTTCCTCATCTTTCTCTTCTTATAAAACATCCCCCATCTCCTGCCGGTCTTCCCTCAGCCCTAACTCTTCCCTCTTTCACTACGCCCCCCGTTTCAACACCGCTCACCTTTCGACCGATGCCCGGAACGGCGATCCCCTCGCCGGTTCCGGTCCAGAAAATGAAAAACGTCGCAACGTTTGGTCTCTTTACGGCTCCGTTTCGAGTAAGCTTACCACTCAAAGGGTCGGAAGCAGTAGCGATGGAAAAGAGCCCGAACAGAGCCTTGGAGTTCTAAATGGAGATGGGGCAGAGGATTCATTGAACGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGGTTTAGATGATAAGTTGACTTGCAAGACGAATTCGGGGAAGCTTGCGGGATTGAAGAAGAAGAGTAAAGTTTCTTGGGTTTGTTCGGACTGTGGGCATAGTGAGGGGCAGTGGTGGGGAACTTGTCAGTCCTGTCGAAAGGTTGGGACAATGAAGCAGTTTTCAGTGGGGAATGATAGTGAAGGGGGGAGTCGAACATGGCTTCCAAAGCAGGTCACTAACGTGAATCCTATGCGGTTAACAGATGTGAACCGAGGGATCAATGCTCAGGATTGGAGACTTCCCTTGTAAGTTATATTTTCCAACTTTATGTTCTTTTATCTCTCTTTCGTACTAAAAATGCATATCAAACTCATTAGAGTAGTTCCAATTAGAGTGAGTCTAAGCTTAGCGTTCTTTTAATCCATTATTGCCTTTTAACCTCGCGCTTGATGGAGCTCGGGGTAGTGTAGTGAACTCTATGGATTATAATTTATAACATTATATGAACGTATTGGATATCCAACGGTTTGGGGGGATATATTTTTTTAGCCATCTTAGATGGATGTTGATAGGAGGGAAAGTTTATGTCTTTTCACCTTGCTTGATGTTTAGGCCTGGTCCCTTCGGAAATGAAGTGGCAAGGGTGCTTGGTGGTGGGCTGGTGCCAGGTTAGTTCAAACTTCAAGTTTTATTTTACGTAGTATTGTGATTGTGCTTAATACTTGCCATCTAGTTATTCTTTATTTTACTTGCTTCTATGTAAAATTGTTTGATTCCTGTAAGACGAGGCTATGATTTCTGTTTTCCATCTGTCTGATTCTCTTTTATCCTTAGTAATCATTAATCAACCGAGGTTAAAAAATGTTTTATTTTTGTAAAACTTGTACTTCCACTCAAGACAGGCAATGGATCTTTATCAAGTTAATTTTTCATCTGCATGACGATAATTTATCTCATAGTAGGATATGCTAAGCTAAACTAGATAGCGAGCACTAGCCTTTGATTATCATGTATAGTATCTACTGAGTCAGGTATGTTTATATTCATATGAAGTAAATCTCACCTTAATTTATATCATAATGATTTATATGAATCCTTCATAATTTTGAGGATTGTAAGTTAAAATGTTACCATTTGTGATTTTGGTTTTTTAATATATCATCCTCTAGATTTCCTTTGAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTATATTAATATCTGCATCTTCCTGGGTTTAAAGGTTCACTTGTTTTGATCGGTGGTGACCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGGTATGAAGACATGTAGACCCCGATTGATTTGGTAGTTATTTGAAGTTATATTTCATTATTATCTTATTATTTCCAATTTTTTTGTTCATGTTGTCAAATCACACATTTGATTTGAAGATTGCTGCCATTTTAGCTGAAGGGTGTGGCGAAGGTGGATCAAAATCCGTTGTTTATGTCTCTGGGGAAGAGGTAACCCTCCTAACAGTCTAAGATAGTAAGATGGTTAATTTTCATCGTTCTTTCTAAAAATTCTCCGAACACGTCTAGGACTCTTGGTGAGTTCCTTCCAAATTCATGTACCAATGTCCTTTCGCAGAGTGTGGAGCAAATTGGAAATAGAGCAGACCGATTGAAGATTCAAACCGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGTGCGTCATGTACATTTTCTTGCTAGTTTTGTTCTGGTGTTGACTTCTTCAACTCCTGCCTACCTTTCTTTTTTTTTTGTTTACTTGGATTATAGTTATGATTCACTGGTCTAGAACTCTAGGTGATAGGTTGATCTACATTAAAGATTTAGTGTATTTGATAAATCATAAAGGATAGGTAGTCTTTTCAAATGTAAATGTGCTAAGTGATGGAAGATGTGAAATTAATTAAGATTTTTCCTTATTTCAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGAAGTAGCTGGAAGTGCTGGAGGGATTACACAGGTTAGAAACATTATTCTACCAAACATGTGGTCTAGGTGAAAACTTTTTTATGCTTGTGCACTGCTTCACCATAATCATACAGTGAATTTAGAACTATATGATTCTCTCAAGGCTGAGATCTTAAGAACTCCAATCTTGTCAGGTGAAGGAATGCACCTCAGCCTTTCTCCGTTATGCAAAGACAACCGGCATCCCCATTTTATTGGTAAGTAAAGCCAACACCAATTCATGTGTATTCTGTTGTTTGGATGGAATCAACTGTACAGACTTGTAGTGTAGTGCTTGATACAATAAGTCCACTATTGCTTTCTCCGGTACAAATTTCTTTCTTAGCTTTTCAAATCCTGAACCTCCGAAATTTTATAAACTATAGCATTTCTTAAACCTGTAGTTATTGTGAATAAAGTGTCATCTTTGCGTTTTGAAAGACTAACCTGTCACCCATTAAACATTCCTTTCAAGTTCTTTCATATGAAGCAAGAATTACAACAATCTATCTCCAAGTTAGGTTTGGAAGAAACTCAAGATCACCTTTTCATTTTTTTTTCTTCCCTTTCATTCAATGGCTTTCTGATCTTGACGTTCCCATTTTAACACTTTTGGCTGGCTTACAGTGCTTATATGTATCATTAGTCTCCTCTTCTCCATAGTAGAATTTTTCTTGGATTAGAGGGATTGTATTTTTTTGTGGGTTCATTTTGCGTTTGTGGCCTGTCTTGGTGCAAATTGTTCACTGTAAAGTTCAAACGTTCTTATGACTATTAGGCTTCTTCTCCTTCTGTTTTATTTTTTTTGTTTTTACTGCGGCTTCTTTACCCTGGCTGAAGTTTCCCATCATTTTTATATTTCATTTTTCAATGAATATTTTCTTATAAATTAAAATATTTCCTTTAGTCGTACATCAATTCATCCTTCGTTTCGATGATGGTAGACATTATGACATATATGCTTTTTGCTCAAATACTGTTTTACTAGCTATGGGTTTCTCAATTCTCTGATTTTTCCATAAAAATCGGTGGCTTGGGACCTTCCTAACAAGATGGAAGGTCAGTTTTGCTTACTGTCCTTTAGATGAAAGTAATAATCTACCTATTGTTGTATTGGTCTAGAGTGCATATTAGTGTAGCTACCACCTCAATACTCGACCTGTTTTTCATTTCAACTTTTGTATCATTTATCATCTTCCAAAAATTGCACTATTTCGGATCTTTTGGTGGGATCTGAGAATCCTGTGTCTTTTTCTTTCGGGTTGAATTGTAATTTGACCAATTGGGAGATGATGGAGGTGACCTCTCTTCTTTCCTTGCTTGAAGGGTGGTCATTTAGGGAGAGGAGAAGGTATCTTTGTGTTTGGAACTCTAACCCTAGTCGTGGATACACTTGTAAGCCTTTGTTAAGGAGTTGGTTTTTTATGTGGTCTGGAGGACTAAGGTTCCTAAAAAAGTTAGGTTCTTTATCTGGCAAGTCTTGCATGGTTGGTTGGCTTGTTAGTAGGAGAACTTTGCTTGTCAAGCCTTTCTATTCCATGCTTTGTTGGAAGGCAGTGGAAGATCTTGATCATCTTTTTTGGGATTGCCAGTTTGTGTAGGCTGTGTGGAGCACTTTCCTTCAGGAGTTCGGTGTTAACTTTGCTGGTTTACAAAGTGTCAGAGCGACAATCGAGGAGTTCCTCCATCCACCCTTTAGAGACAAAAGGGGTTTTTTTTATCGCTTGTCGGGGTGAATGTTGTTATTTGGGACATTTGGGGTGAGAAATGATAGGCAACATTTTACTTAGTTGGTCTCCTTTTTTCAATGGAGGTGTTTTGTTGGACTGGTTTTAGGTGTTGTTTTCATTAAAAAAAGAGTGATTTTGAAATGGCTAAAATCACTTGTCATGTTTAAAATTACCCAAAAACACTTCTTTAATCACTCAAACCAATTCAATGTTTAATTTTACATTCTTGAACACAGTTTCTACATAGGAATGGATTTTGAATGATCAAAAGCCTTTTTCGAGTGATTTTGGCCATTTGAAAATCGCTTCCAAGCATGTTATTACTCTCTCAAGAATCTCGTATACATACGTTGGTTTTTGTATTTCTATGCGTATTTTGGAAGCAATCTTTTCTTTATGCATGTGGACCTATGTATGCATAGGTATGTGTTTGGAAGTAATATACACATGGATATGTTGATATATTTCAGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGACTTCTGGAGCACATTGTGGATGTTGTACTGTATGTGGAAGTGGGTACATGTACATCCCTTACATTTTACTTCGATTTTCCTTTCTTTTTAGCCGTTCATTTCAGACATATTATCATCGGCTTTGTCAGATGACTGATATTTACTGACTCAAGCCTTTGGGGCTTGATTTTTCAATAATCTACCATTGTACACAAACCTTTTCTTGCTAATCCCAGTACTTCCACAAGTAATTTATTTTTAGGTACACTGTCTCATCTCTTACTAATTTCGTCTTTCCATGCATGTATATTTTCTTTCTAATCTGTCTCCTTTTATGTAGTGCATTTGTTAAGTTTATAAATATTAATGCCACCCTTTTGTTTCCATCTAGAAATATGTACTTGTAACTAGATCAACGACCTCTTTGAAATATTAGAATCAAGCAGTTATCTATTTATTTTTATAAAGGAGCAAAGTATTTTATTGCTAATTTCACAGTTTTGATAGAGGCACTTCCAGTTCCAGACCTTTAATTTGATTTAATGTCTTCATATGACTACAGCCTACAGTACGTGGGTAGTGTAAATAATTCACATGTTCTTGAGTTGTTCCTATTATATTATTTACTTCTATAAAGTATTTAAAAGTGATTTGTGTGAAAGGAAAAAAGAATGAAATAATGTGTGGAATAGGGAGAGAAATGCTCGTTGCATCGGCTACTACGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCAGGACTGGAAGTGGTGTCAAATCCAAGTGAGATGTTTAGAAGGGATCACAATGGAAATTTAAATTCAGAGCATTTGACAGGACTTGCTGTTGCAGTGGTCATGGATGGAACTCAAACCTTCCTGCTTGAAATTCAGGTGCTTCGATCCAACCCCTCTCTTAAAGAAAAACCACGTTCGAATGTTTTCTTATTGAAAATATCTATTAAGTTATAATTACTTATTTAAAAAAGAAATCTATTATTACTTATCGGTCTCTAAGCTAAAAAATAGTGTTTATAGGTCTCTAAAATTCAAAATCTTTTTTTGATAGGTCTTGAACCTTGAACCTTTAATTTTGTGTCTATGAAGTTTTGTCATATTTCATATATTTTTAAAGGTTTACGATTTTGATAGACACAAAATTCAAAGTGTCCTATTCAATAAATTGAAACTTGAAGTTTAGAGGCCTTAAAGAATCTTTCAGATACAACGTTTAAGGTCATAAAGCTTGTTGTTTAGTCACAATATTTTAGTTTTGTAAGCACGTCCTTTTATTATATTTTTTACTTTTCATTTTTTGAAAAAAAGCTCATATTTACTTTTTAATTGTATTAGAACAACTTTTGAACATTGTGAAATCCTCTCCATCTCAATAATTTATTGGATTATCCCAGACTATCTTCGTGGTTAGAAATTTTTTTTTTCTTTTCAGAAAGGTTATTCTCTTTTATTTGTTTGCGAATTTATGCGATTGTGCTTTCTTTGTTGTGAAAATTTTGAATTATAAACTTCTCCAAATGAATATTTTCATCTTTGGATGGCTTAATTTGCCTTAAATTTTCTTTGATTATTTAGCCATATTTGATGATACTCTCGTTTTTATTAATTAACCATATCAAAGCTACTTATTTCTTGTTAAAAAATTTGGATGGCTAAATTTATAATAGCTTCTGTTAATTAAAAAAGAGAGAGAGAGAGAGAACCATTAGCATATTTTTAAGGCAGAAAATAAGTTGTAATAACCCTTTTATTGACCTCCAATCAACATATACCATTTTCGTTGCTAATAACTCGATCATTCTCATTTTGATCAATTGTTACGTTAATTTTCTAGGCATTGTGTTCGTCCAGTTCCTCCTTTGTTACACACGTTAATGGGATTCAAAACCGCAGGGCTGATATGATCATATCGGTATGTTGTTAAGTGAATTATTTCTGGTAAACTCTGACATCTCGAGTGCCAACTTTTTGTTTTTTTAAAGGCATTCAACAAACTTTCTCATACTAATTGCTGTTTATCCTAGTCTATAATTTCCTCACGGACATGCAATTGAGAAATACGGCCTTCATTTGGTCTGAGGCATTACTTTTATGCATTCAGATAACAATGACGTTTACTCGAATTAAAAACTTATGGATCTCATTTTGATGAACAATTTTACAGAGTACCAATATCAATTTTATTGAACTTGAACTATAGAGCTTCTGAAATTTAGCTATCTATCACTTTTGTTGCTTGTTTGATTATTTCATGTTTAATTTCTTATCCTTCCCCCTTTAACATTCCTGGTTTAATATGAATGTTTCTACTTTTCATTATTTTGAACTTCCTTCGTCTGCCAACTTGAGCATTGCTTGGTGGTTGCAATTTTATATACTAGGGATAAAGAGAGAAAAGAAAGAAATCTTTATAATTTATGATGTTAATTGTGAAATTGGTTAACTATTTATTGATTAATTTTTAAGTTCATCTTATGAATGGTAGGTTCTCATGAAGCAAGCTGGGTTGAAGCTACAAACAAATGTGAGTTGACAGCTCTCCTTTTTTCTCCCCATCTAAAAATTTTATTACTCTGCTTTAGTGGAGTTGATGTTAATCTTCCCTCATTGATTGGTAAAAGTTGATGGATCTGCTCAATTATTGTCCTATGATAAACAGCAGTTATATTTCTTACTATATTTCTTTCATACCTCTAATAGTCTGAATATGTCTCGCTTTATGCTTTATTTGTTTTGTACTTTGAAATTACAGGCCATATTTATAAATGTTGTGAGCGGGGTGACATTGACAGAGACTGCAGGAGATCTTGCCATTGCTATGGCAATTTGCAGCAGGCATGTGATTTCAACTAATTGCACTTAACTGATAATCATACCTTTTACAAATAACTTTTTGGTTTCTGTCTCTCTAACATTTAATTTATTTGTTGTCACTTCAGCTTTTTGGAGTTTAACATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTCGGCGGCGAGCTTCGCATGGTAAGCATTCTATTTCGGCGCTATTACAGAAGTTTTGGCATGCCTTGTACAGATCATCTAGTTTTCAGTCTACCATAAGGGCTGTTTTCAAATTTGTTTAATGAAATATCAAATCTTCATTAACGTACAGGTGGGTAGGATGGAGAAGAGGATCAATACTGTGGCCAAATTGGGTTTCAAAAGATGTGTAGTACCCAAGTCAGCTGAAAATTGTTTAGGAGTGGTCGGGTTGGGCAAGATGAAGCTCATAGGTTGCACAAATTTGAAAGATGTTATCAACAACGTTTTCATGGTAAGAGATGAAGTTACAACTCCTTCAATGGCTAGTTTTTAGTTTTGTTCTTTTTTGGCATAAAGATACAACTCCTTCCAAAATGAAGTGGATGTACATAAAATGTATCCTTTAAGTCATTCAAACAAGAAAAGTTGATTAGGCCAGGCAAGTTATTTACTTGATGAAAATTTATGACAGTTCTTATATTGGCATGAATTTAATTGCATCAATAGTAACTTCAACGTTATTTGGTCATGAGTTTGGTGTTGGGATGAAGAGAAGTGATTTATAGCTCCC

mRNA sequence

TTACAATAAAAGGAAGCTCGGGAATTCGAACCGTGTGTTTGCTGCAATGGAAATTGGCGGGGGATTATTCCTTAAATCCTTCATCGTCTTCCTAAAACCCTCAAACTCTCTTCGATGCAGCTCTTAGACATGAAGTCCCTCAGAACTATTTTCTATTCTCGAAAGCACTTTCTCATTTCCTCATCTTTCTCTTCTTATAAAACATCCCCCATCTCCTGCCGGTCTTCCCTCAGCCCTAACTCTTCCCTCTTTCACTACGCCCCCCGTTTCAACACCGCTCACCTTTCGACCGATGCCCGGAACGGCGATCCCCTCGCCGGTTCCGGTCCAGAAAATGAAAAACGTCGCAACGTTTGGTCTCTTTACGGCTCCGTTTCGAGTAAGCTTACCACTCAAAGGGTCGGAAGCAGTAGCGATGGAAAAGAGCCCGAACAGAGCCTTGGAGTTCTAAATGGAGATGGGGCAGAGGATTCATTGAACGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGGTTTAGATGATAAGTTGACTTGCAAGACGAATTCGGGGAAGCTTGCGGGATTGAAGAAGAAGAGTAAAGTTTCTTGGGTTTGTTCGGACTGTGGGCATAGTGAGGGGCAGTGGTGGGGAACTTGTCAGTCCTGTCGAAAGGTTGGGACAATGAAGCAGTTTTCAGTGGGGAATGATAGTGAAGGGGGGAGTCGAACATGGCTTCCAAAGCAGGTCACTAACGTGAATCCTATGCGGTTAACAGATGTGAACCGAGGGATCAATGCTCAGGATTGGAGACTTCCCTTGCCTGGTCCCTTCGGAAATGAAGTGGCAAGGGTGCTTGGTGGTGGGCTGGTGCCAGGTTCACTTGTTTTGATCGGTGGTGACCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCCATTTTAGCTGAAGGGTGTGGCGAAGGTGGATCAAAATCCGTTGTTTATGTCTCTGGGGAAGAGAGTGTGGAGCAAATTGGAAATAGAGCAGACCGATTGAAGATTCAAACCGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGAAGTAGCTGGAAGTGCTGGAGGGATTACACAGGTGAAGGAATGCACCTCAGCCTTTCTCCGTTATGCAAAGACAACCGGCATCCCCATTTTATTGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGACTTCTGGAGCACATTGTGGATGTTGTACTGTATGTGGAAGGAGAGAAATGCTCGTTGCATCGGCTACTACGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCAGGACTGGAAGTGGTGTCAAATCCAAGTGAGATGTTTAGAAGGGATCACAATGGAAATTTAAATTCAGAGCATTTGACAGGACTTGCTGTTGCAGTGGTCATGGATGGAACTCAAACCTTCCTGCTTGAAATTCAGGCATTGTGTTCGTCCAGTTCCTCCTTTGTTACACACGTTAATGGGATTCAAAACCGCAGGGCTGATATGATCATATCGGTTCTCATGAAGCAAGCTGGGTTGAAGCTACAAACAAATGCCATATTTATAAATGTTGTGAGCGGGGTGACATTGACAGAGACTGCAGGAGATCTTGCCATTGCTATGGCAATTTGCAGCAGCTTTTTGGAGTTTAACATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTCGGCGGCGAGCTTCGCATGGTGGGTAGGATGGAGAAGAGGATCAATACTGTGGCCAAATTGGGTTTCAAAAGATGTGTAGTACCCAAGTCAGCTGAAAATTGTTTAGGAGTGGTCGGGTTGGGCAAGATGAAGCTCATAGGTTGCACAAATTTGAAAGATGTTATCAACAACGTTTTCATGGTAAGAGATGAAGTTACAACTCCTTCAATGGCTAGTTTTTAGTTTTGTTCTTTTTTGGCATAAAGATACAACTCCTTCCAAAATGAAGTGGATGTACATAAAATGTATCCTTTAAGTCATTCAAACAAGAAAAGTTGATTAGGCCAGGCAAGTTATTTACTTGATGAAAATTTATGACAGTTCTTATATTGGCATGAATTTAATTGCATCAATAGTAACTTCAACGTTATTTGGTCATGAGTTTGGTGTTGGGATGAAGAGAAGTGATTTATAGCTCCC

Coding sequence (CDS)

ATGCAGCTCTTAGACATGAAGTCCCTCAGAACTATTTTCTATTCTCGAAAGCACTTTCTCATTTCCTCATCTTTCTCTTCTTATAAAACATCCCCCATCTCCTGCCGGTCTTCCCTCAGCCCTAACTCTTCCCTCTTTCACTACGCCCCCCGTTTCAACACCGCTCACCTTTCGACCGATGCCCGGAACGGCGATCCCCTCGCCGGTTCCGGTCCAGAAAATGAAAAACGTCGCAACGTTTGGTCTCTTTACGGCTCCGTTTCGAGTAAGCTTACCACTCAAAGGGTCGGAAGCAGTAGCGATGGAAAAGAGCCCGAACAGAGCCTTGGAGTTCTAAATGGAGATGGGGCAGAGGATTCATTGAACGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGGTTTAGATGATAAGTTGACTTGCAAGACGAATTCGGGGAAGCTTGCGGGATTGAAGAAGAAGAGTAAAGTTTCTTGGGTTTGTTCGGACTGTGGGCATAGTGAGGGGCAGTGGTGGGGAACTTGTCAGTCCTGTCGAAAGGTTGGGACAATGAAGCAGTTTTCAGTGGGGAATGATAGTGAAGGGGGGAGTCGAACATGGCTTCCAAAGCAGGTCACTAACGTGAATCCTATGCGGTTAACAGATGTGAACCGAGGGATCAATGCTCAGGATTGGAGACTTCCCTTGCCTGGTCCCTTCGGAAATGAAGTGGCAAGGGTGCTTGGTGGTGGGCTGGTGCCAGGTTCACTTGTTTTGATCGGTGGTGACCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCCATTTTAGCTGAAGGGTGTGGCGAAGGTGGATCAAAATCCGTTGTTTATGTCTCTGGGGAAGAGAGTGTGGAGCAAATTGGAAATAGAGCAGACCGATTGAAGATTCAAACCGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTTGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATTGATTCTATTCAAACAGTTTATTTGCAAGAAGTAGCTGGAAGTGCTGGAGGGATTACACAGGTGAAGGAATGCACCTCAGCCTTTCTCCGTTATGCAAAGACAACCGGCATCCCCATTTTATTGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGACTTCTGGAGCACATTGTGGATGTTGTACTGTATGTGGAAGGAGAGAAATGCTCGTTGCATCGGCTACTACGACCAGTGAAGAACCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCAGGACTGGAAGTGGTGTCAAATCCAAGTGAGATGTTTAGAAGGGATCACAATGGAAATTTAAATTCAGAGCATTTGACAGGACTTGCTGTTGCAGTGGTCATGGATGGAACTCAAACCTTCCTGCTTGAAATTCAGGCATTGTGTTCGTCCAGTTCCTCCTTTGTTACACACGTTAATGGGATTCAAAACCGCAGGGCTGATATGATCATATCGGTTCTCATGAAGCAAGCTGGGTTGAAGCTACAAACAAATGCCATATTTATAAATGTTGTGAGCGGGGTGACATTGACAGAGACTGCAGGAGATCTTGCCATTGCTATGGCAATTTGCAGCAGCTTTTTGGAGTTTAACATTCCAAATGACATTGCATTCATTGGTGAAATTGGCCTCGGCGGCGAGCTTCGCATGGTGGGTAGGATGGAGAAGAGGATCAATACTGTGGCCAAATTGGGTTTCAAAAGATGTGTAGTACCCAAGTCAGCTGAAAATTGTTTAGGAGTGGTCGGGTTGGGCAAGATGAAGCTCATAGGTTGCACAAATTTGAAAGATGTTATCAACAACGTTTTCATGGTAAGAGATGAAGTTACAACTCCTTCAATGGCTAGTTTTTAG

Protein sequence

MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTDARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF

Homology

[Close]

BLAST of Cmc04g0099941 vs. NCBI nr
Match: XP_008447567.1 (PREDICTED: DNA repair protein RadA isoform X1 [Cucumis melo] >KAA0050859.1 DNA repair protein RadA isoform X1 [Cucumis melo var. makuwa] >TYK08493.1 DNA repair protein RadA isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 635/636 (99.84%), Postives = 635/636 (99.84%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60
           MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD
Sbjct: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60

Query: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120
           ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS
Sbjct: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120

Query: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180
           LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV
Sbjct: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180

Query: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240
           GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL
Sbjct: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240

Query: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300
           GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD
Sbjct: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300

Query: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360
           RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS
Sbjct: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360

Query: 361 AFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420
           AFLRYAKTTGIPI LIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG
Sbjct: 361 AFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420

Query: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480
           STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL
Sbjct: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480

Query: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540
           CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM
Sbjct: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540

Query: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600
           AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV
Sbjct: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600

Query: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 637
           VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF
Sbjct: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 636

[Close]

BLAST of Cmc04g0099941 vs. NCBI nr
Match: XP_011651479.1 (uncharacterized protein LOC101217616 [Cucumis sativus] >KGN58017.1 hypothetical protein Csa_011206 [Cucumis sativus])

HSP 1 Score: 1123.6 bits (2905), Expect = 0.0e+00
Identity = 576/636 (90.57%), Postives = 596/636 (93.71%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60
           M LLDM SLRTI YSRKHFLISS+FSSY TSPISCR  L+PNSSLFHY      AHLST 
Sbjct: 1   MHLLDMNSLRTILYSRKHFLISSTFSSYTTSPISCRFYLAPNSSLFHY------AHLSTH 60

Query: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120
           A N DPLAGSGPE+EK RNVWS+YGSVSSKL TQRVGSS DGK+PE S+GV NGDG+ED 
Sbjct: 61  APNADPLAGSGPEHEKGRNVWSIYGSVSSKLATQRVGSSIDGKDPEPSIGVQNGDGSEDL 120

Query: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180
           LN+KTSESVRKVGL+D+LTCK NSGK+ GLKKK+KVSWVCS+CGHSEGQWWGTCQSC  V
Sbjct: 121 LNKKTSESVRKVGLEDRLTCKPNSGKVVGLKKKNKVSWVCSNCGHSEGQWWGTCQSCHMV 180

Query: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240
           GTMKQFSVGNDS G  RTWLPK+VTNVNP+RLTDVNRGIN QDWRLPLPGPFGNEVARVL
Sbjct: 181 GTMKQFSVGNDSGGERRTWLPKEVTNVNPLRLTDVNRGINTQDWRLPLPGPFGNEVARVL 240

Query: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300
           GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD
Sbjct: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300

Query: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360
           RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGI+QVKECTS
Sbjct: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGISQVKECTS 360

Query: 361 AFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420
           AFLR+AK TGIPI LIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG
Sbjct: 361 AFLRFAKITGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420

Query: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480
           STDELGVFEMLPSGLEVVSNPSEMFRRDHNGN NSEHLTGLAVAVVMDGTQTFLLEIQAL
Sbjct: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNFNSEHLTGLAVAVVMDGTQTFLLEIQAL 480

Query: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540
           CSSS SF THVNGIQNRRADMIISVLMKQ GLKLQT+ IFINVVSGVTLTETAGDLAIAM
Sbjct: 481 CSSSRSFDTHVNGIQNRRADMIISVLMKQVGLKLQTSTIFINVVSGVTLTETAGDLAIAM 540

Query: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600
           AICSSFLE +IPNDIAFIGEIGL GELRMVGRMEKRINTVAKLGFKRCVVPKSA NCLGV
Sbjct: 541 AICSSFLESHIPNDIAFIGEIGLSGELRMVGRMEKRINTVAKLGFKRCVVPKSAVNCLGV 600

Query: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 637
           VGLG+MKLIGCTNLKDVINNVFMVRDEVTTPSM SF
Sbjct: 601 VGLGEMKLIGCTNLKDVINNVFMVRDEVTTPSMGSF 630

[Close]

BLAST of Cmc04g0099941 vs. NCBI nr
Match: XP_038906306.1 (DNA repair protein RadA [Benincasa hispida])

HSP 1 Score: 975.7 bits (2521), Expect = 1.9e-280
Identity = 513/650 (78.92%), Postives = 555/650 (85.38%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60
           MQLLDMKS RTIFYSRKHFLIS++ SSY  SPIS RS L+PNSSLFHYA RFNTA LST 
Sbjct: 1   MQLLDMKSFRTIFYSRKHFLISATSSSYTQSPISSRSRLNPNSSLFHYAGRFNTAQLSTI 60

Query: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGV------ 120
             DA NGDP+ GSG EN K R VW+ Y  V+S+L TQRV S SD KEPE S+G+      
Sbjct: 61  GVDAPNGDPIGGSGSENGKDRRVWTTYDPVTSRLLTQRVRSGSDRKEPEPSIGIQTFGAS 120

Query: 121 -LNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAG-LKKKSKVSWVCSDCGHSEGQ 180
             NGDGA+D LNEKTSESV KVGL D   C+ N GK+ G  KKKSKVSWVCS+CGH+EGQ
Sbjct: 121 SRNGDGAKDFLNEKTSESVGKVGLGDGSVCRPNLGKVVGSKKKKSKVSWVCSNCGHNEGQ 180

Query: 181 WWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGI 240
           WWGTC+SC  VGTMKQFS G+DS GGS          R WLPKQ T+ NP+RLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFSEGDDSGGGSRGFEVSENVVRAWLPKQATDGNPLRLTDVNRGI 240

Query: 241 NAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGG 300
           N +DWRLPLPGPFG+EVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAA+LAEGCG+G 
Sbjct: 241 NTRDWRLPLPGPFGSEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAALLAEGCGQGE 300

Query: 301 SKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
             SVVYVSGEESVEQIGNRADRL I+TENL+LYSSTDVEDIFEKIQP+SPRALIIDSIQT
Sbjct: 301 LTSVVYVSGEESVEQIGNRADRLNIETENLYLYSSTDVEDIFEKIQPISPRALIIDSIQT 360

Query: 361 VYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVL 420
           VYLQ VAGSAGGI QVKECTSA LR+AK TGIPILLIGHVNKSGEVAGPR+LEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLT 480
           Y+EG+KC  HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN N NSE+L 
Sbjct: 421 YMEGDKCLSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLA 480

Query: 481 GLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAI 540
           GLAVAV+MDGT+TFLLEIQALC S SS    VNGI   +AD+IISVLMKQAGLKLQ + I
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVTRQVNGIHQSKADLIISVLMKQAGLKLQESGI 540

Query: 541 FINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINT 600
           F+NVVSG+TLTETAGDLAIAMAICSSFLEF IPNDI FIGEIGLGGELRMV RMEKRINT
Sbjct: 541 FLNVVSGLTLTETAGDLAIAMAICSSFLEFPIPNDIVFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRDEVT 630
           VAKLGFKRCVVPKSAENCLG+V LG+MKLI C +LKDVINNVF+   EV+
Sbjct: 601 VAKLGFKRCVVPKSAENCLGLVELGEMKLICCRHLKDVINNVFIAGGEVS 650

[Close]

BLAST of Cmc04g0099941 vs. NCBI nr
Match: XP_022980476.1 (uncharacterized protein LOC111479856 [Cucurbita maxima])

HSP 1 Score: 957.2 bits (2473), Expect = 7.0e-275
Identity = 509/647 (78.67%), Postives = 547/647 (84.54%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60
           MQL DMKSLRTIF+SRKHFLIS+  SS   SPIS RS L+P+SSLFH A RFN A LST 
Sbjct: 1   MQLSDMKSLRTIFFSRKHFLISTISSSSTPSPISSRSRLNPSSSLFHCAGRFNAAQLSTT 60

Query: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLG------- 120
              A NG+ LA SGP N K R VW++Y  V+SKL TQRV SSSD K+PE S G       
Sbjct: 61  DVPAPNGNCLAASGPGNGKDRGVWTIYDPVTSKLLTQRVKSSSDRKDPEPSFGNETFGAS 120

Query: 121 VLNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAG-LKKKSKVSWVCSDCGHSEGQ 180
             NGDG E+ LNEKTSESVRKVGL+     +   GK+ G  KKKSKVSWVCS CGHSEGQ
Sbjct: 121 SRNGDGTEEFLNEKTSESVRKVGLEGGSVSRPKLGKIVGSKKKKSKVSWVCSSCGHSEGQ 180

Query: 181 WWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGI 240
           WWGTC+SC  VGTMKQF+ G+D+ GGS          R WLPKQ T+V+P+RLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240

Query: 241 NAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGG 300
           N  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAAILAE CGEG 
Sbjct: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGD 300

Query: 301 SKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
             SV+YVSGEESV+QIGNRADRL I+TENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 LTSVIYVSGEESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVL 420
           VYLQ VAGSAGGI QVKECTSA LR+AK TGIPILLIGHVNKSGEVAGPR+LEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLT 480
           Y+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+N N NSE+L 
Sbjct: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLA 480

Query: 481 GLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAI 540
           GLAVAV+MDGT+TFLLEIQALC S SS   HVNGIQ  +ADMIISVLMKQAGLKLQ + I
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVI 540

Query: 541 FINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINT 600
           F+NVVSGVTLTETAGDLAIAMAICSSFLEF IPNDIAFIGEIGLGGELRMV RMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRD 627
           V+KLGFKRCVVPKSAE CLGVV LG+ +LIGC NLKDVIN+VFM RD
Sbjct: 601 VSKLGFKRCVVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARD 647

[Close]

BLAST of Cmc04g0099941 vs. NCBI nr
Match: XP_023527681.1 (uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 949.9 bits (2454), Expect = 1.1e-272
Identity = 509/647 (78.67%), Postives = 544/647 (84.08%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60
           MQL DMKSLRTIF+SRKHFLIS+         IS RS L+PNSSLFH A RF+ A LST 
Sbjct: 1   MQLSDMKSLRTIFFSRKHFLISA---------ISSRSRLNPNSSLFHCAGRFHAAQLSTI 60

Query: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLG------- 120
              A NGD LA SGP N K R+VW++Y  V+SKL TQRV SSSD KEPE S G       
Sbjct: 61  GVPAPNGDRLATSGPGNGKGRDVWTIYDPVTSKLLTQRVKSSSDRKEPEPSFGNETFGAS 120

Query: 121 VLNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAG-LKKKSKVSWVCSDCGHSEGQ 180
             NGDGAE+ LNEKTS SVRKVGL+     + N GK+ G  KKKSKVSWVC+ CGHSEGQ
Sbjct: 121 SRNGDGAEECLNEKTSGSVRKVGLEGGSVSRPNLGKIVGSKKKKSKVSWVCASCGHSEGQ 180

Query: 181 WWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGI 240
           WWGTC+SC  VGTMKQFS G+D+ GGS          R WLPKQ T+V+P+RLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFSEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240

Query: 241 NAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGG 300
           N  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAAILAEG GE  
Sbjct: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEGRGESD 300

Query: 301 SKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
             SV+YVSGEESVEQIGNRADRL I+TENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 LTSVIYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVL 420
           VYLQ VAGSAGGI QVKECTSA LR+AK T IPILLIGHVNKSGEVAGPR+LEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTSIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLT 480
           Y+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN N NSE+L 
Sbjct: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLA 480

Query: 481 GLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAI 540
           GLAVAV+MDGT+TFLLEIQALC S SS   HVNGIQ  +ADMIISVLMKQAGLKLQ + I
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVI 540

Query: 541 FINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINT 600
           F+NVVSGVTLTETAGDLAIAMAICSSFLEF IPNDIAFIGEIGLGGELRMV RMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRD 627
           VAKLGFKRCVVPKSAE CLGVV LG+ +LIGC+NLKDVIN+VFM RD
Sbjct: 601 VAKLGFKRCVVPKSAEKCLGVVELGETRLIGCSNLKDVINDVFMARD 638

[Close]

BLAST of Cmc04g0099941 vs. ExPASy Swiss-Prot
Match: Q9KGG1 (DNA repair protein RadA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=radA PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-97
Identity = 201/468 (42.95%), Postives = 294/468 (62.82%), Query Frame = 0


Query: 153 KSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRL 212
           K K  ++C +CG+   +W G C  C+   +M +          SR+++        P  +
Sbjct: 3   KKKTKFMCQECGYESAKWMGKCPGCQSWNSMVE-EFTEVKAKSSRSYVTSGAGIAKPQPI 62

Query: 213 TDVNRGINAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILA 272
           T V R    Q+ R+        E+ RVLGGG+VPGSLVL+GGDPG+GKSTLLLQ++A LA
Sbjct: 63  TKVER---EQEPRIDTS---MKELNRVLGGGIVPGSLVLVGGDPGIGKSTLLLQLSARLA 122

Query: 273 EGCGEGGSKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRAL 332
           +       + V+Y+SGEESV+Q   R+DRL + +++L++ + TD+E I + I  + P  +
Sbjct: 123 D-----LKQRVLYISGEESVKQTKIRSDRLGVLSDHLYVLAETDMEKIEQAIGEVDPTLV 182

Query: 333 IIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLE 392
           IIDSIQTVY  E+  + G + QV+ECT++F+R AKTTG+ I ++GHV K G +AGP+LLE
Sbjct: 183 IIDSIQTVYQDEITSAPGSVAQVRECTASFMRIAKTTGVAIFIVGHVTKQGAIAGPKLLE 242

Query: 393 HIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGN 452
           H+VD VLY EGE+   +R+LR VKNRFGST+E+G+FEM  SGLE V+NPSE+F  D    
Sbjct: 243 HMVDSVLYFEGERHHTYRILRAVKNRFGSTNEMGIFEMKESGLEEVANPSEIFLED---- 302

Query: 453 LNSEHLTGLAVAVVMDGTQTFLLEIQALCSSSS--SFVTHVNGIQNRRADMIISVLMKQA 512
             S  + G  V   M+GT+  L+E+QAL S +S  +      G+ + R  ++++VL K+ 
Sbjct: 303 -RSSGVAGSTVVASMEGTRPVLVELQALISPTSFGNPRRMATGVDHNRISLLMAVLEKRV 362

Query: 513 GLKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMV 572
           G+ LQ    ++NV  GV L E A DL IA++I SSF   +       IGEIGL GE+R V
Sbjct: 363 GMLLQNQDAYVNVAGGVRLDEPAIDLGIAVSIASSFRNQHTNPHEVVIGEIGLTGEVRRV 422

Query: 573 GRMEKRINTVAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVI 619
            R+++R+N  AKLGFKR ++P   +N  G      +++IG + ++D +
Sbjct: 423 SRIDQRVNEAAKLGFKRVIIPD--KNLGGWTIPSTIEVIGVSTVQDAL 451

[Close]

BLAST of Cmc04g0099941 vs. ExPASy Swiss-Prot
Match: P37572 (DNA repair protein RadA OS=Bacillus subtilis (strain 168) OX=224308 GN=radA PE=1 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-93
Identity = 200/468 (42.74%), Postives = 277/468 (59.19%), Query Frame = 0


Query: 153 KSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRL 212
           K+K  ++C  CG+   +W G C  C    TM +  +          +     T   P  +
Sbjct: 3   KTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFSHSVQTVQKPSPI 62

Query: 213 TDVNRGINAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILA 272
           T +           P       E  RVLGGG+V GSLVLIGGDPG+GKSTLLLQ++A L+
Sbjct: 63  TSIETS------EEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLS 122

Query: 273 EGCGEGGSKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRAL 332
                G S SV+Y+SGEESV+Q   RADRL I   +L + S TD+E I   IQ ++P  +
Sbjct: 123 -----GSSNSVLYISGEESVKQTKLRADRLGINNPSLHVLSETDMEYISSAIQEMNPSFV 182

Query: 333 IIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLE 392
           ++DSIQTVY  ++  + G ++QV+ECT+  ++ AKT GIPI ++GHV K G +AGPRLLE
Sbjct: 183 VVDSIQTVYQSDITSAPGSVSQVRECTAELMKIAKTKGIPIFIVGHVTKEGSIAGPRLLE 242

Query: 393 HIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGN 452
           H+VD VLY EGE+    R+LR VKNRFGST+E+G+FEM   GL  V NPSE+F  +    
Sbjct: 243 HMVDTVLYFEGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEE---- 302

Query: 453 LNSEHLTGLAVAVVMDGTQTFLLEIQALCSSSS--SFVTHVNGIQNRRADMIISVLMKQA 512
             S    G ++   M+GT+  L+EIQAL S +S  +      GI + R  ++++VL K+ 
Sbjct: 303 -RSAGSAGSSITASMEGTRPILVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRV 362

Query: 513 GLKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMV 572
           GL LQ    ++ V  GV L E A DLAI ++I SSF +        FIGE+GL GE+R V
Sbjct: 363 GLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLTGEVRRV 422

Query: 573 GRMEKRINTVAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVI 619
            R+E+R+   AKLGFKR ++P  A N  G      +++IG  N+ + +
Sbjct: 423 SRIEQRVKEAAKLGFKRMIIP--AANLDGWTKPKGIEVIGVANVAEAL 452

[Close]

BLAST of Cmc04g0099941 vs. ExPASy Swiss-Prot
Match: Q92F42 (DNA repair protein RadA OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=radA PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.4e-92
Identity = 190/447 (42.51%), Postives = 277/447 (61.97%), Query Frame = 0


Query: 151 KKKSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGSRTWLPKQVTNVNPM 210
           K K    +VC  CG+   +W G C +C +   M +     +    SR+          P 
Sbjct: 3   KAKRTTKFVCQSCGYESAKWMGKCPNCNEWNQMVE---ALEPSKKSRSAFNH---TGEPS 62

Query: 211 RLTDVNRGINAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAI 270
           + T + +  + ++ R+    P   E+ RVLGGG+VPGS+VL+GGDPG+GKSTLLLQ++A 
Sbjct: 63  KATPITQIASEEEARVETNMP---ELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQ 122

Query: 271 LAEGCGEGGSKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPR 330
           L        +K V+Y+SGEES++Q   RA+RL++  +NL++Y+ T++E + E I  + P 
Sbjct: 123 LTL-----TNKKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPD 182

Query: 331 ALIIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRL 390
            ++IDSIQTVY  +V  +AG ++QV+ECT+A +R AK   I I ++GHV K G +AGPRL
Sbjct: 183 FVVIDSIQTVYHPDVTSAAGSVSQVRECTAALMRIAKMQNIAIFIVGHVTKEGAIAGPRL 242

Query: 391 LEHIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN 450
           LEH+VD VLY EGE+   +R+LR VKNRFGST+E+G+FEM   GL  V+NPSE+F  +  
Sbjct: 243 LEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDIGLVEVANPSEVFLEE-- 302

Query: 451 GNLNSEHLTGLAVAVVMDGTQTFLLEIQALCSSS--SSFVTHVNGIQNRRADMIISVLMK 510
                E  +G  V   M+GT+  L+EIQAL S +   +      GI   +  +I++VL K
Sbjct: 303 ---RLEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEK 362

Query: 511 QAGLKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELR 570
           + GL LQ    ++    GV L E A DLA+A+++ SS+ +    +   FIGE+GL GE+R
Sbjct: 363 RVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIR 422

Query: 571 MVGRMEKRINTVAKLGFKRCVVPKSAE 596
            V R+E+R+   AKLGFKR  +PK+ E
Sbjct: 423 RVARIEQRVQEAAKLGFKRIFIPKNNE 430

[Close]

BLAST of Cmc04g0099941 vs. ExPASy Swiss-Prot
Match: Q48761 (DNA repair protein RadA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=radA PE=3 SV=2)

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-91
Identity = 189/447 (42.28%), Postives = 275/447 (61.52%), Query Frame = 0


Query: 151 KKKSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGSRTWLPKQVTNVNPM 210
           K K    +VC  CG+   +W G C +C +   M +     +    SR+          P 
Sbjct: 3   KAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVE---ALEPSKKSRSAFNH---TGEPS 62

Query: 211 RLTDVNRGINAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAI 270
           + T + +  +  + R+    P   E+ RVLGGG+VPGS+VL+GGDPG+GKSTLLLQ++A 
Sbjct: 63  KATPITQIASETEKRVETNMP---ELNRVLGGGVVPGSMVLVGGDPGIGKSTLLLQVSAQ 122

Query: 271 LAEGCGEGGSKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPR 330
           L        +K V+Y+SGEES++Q   RA+RL++  +NL++Y+ T++E + E I  + P 
Sbjct: 123 LTL-----TNKKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQETIDFVKPD 182

Query: 331 ALIIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRL 390
            ++IDSIQTVY  +V  +AG ++QV+ECT+  +R AK   I I ++GHV K G +AGPRL
Sbjct: 183 FVVIDSIQTVYHSDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVTKEGAIAGPRL 242

Query: 391 LEHIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN 450
           LEH+VD VLY EGE+   +R+LR VKNRFGST+E+G+FEM   GL  V+NPSE+F  +  
Sbjct: 243 LEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEVANPSEVFLEE-- 302

Query: 451 GNLNSEHLTGLAVAVVMDGTQTFLLEIQALCSSS--SSFVTHVNGIQNRRADMIISVLMK 510
                E  +G  V   M+GT+  L+EIQAL S +   +      GI   +  +I++VL K
Sbjct: 303 ---RLEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKVSLIMAVLEK 362

Query: 511 QAGLKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELR 570
           + GL LQ    ++    GV L E A DLA+A+++ SS+ +    +   FIGE+GL GE+R
Sbjct: 363 RVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIR 422

Query: 571 MVGRMEKRINTVAKLGFKRCVVPKSAE 596
            V R+E+R+   AKLGFKR  +PK+ E
Sbjct: 423 RVARIEQRVQEAAKLGFKRIFIPKNNE 430

[Close]

BLAST of Cmc04g0099941 vs. ExPASy Swiss-Prot
Match: P74391 (DNA repair protein RadA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=radA PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.4e-86
Identity = 179/462 (38.74%), Postives = 273/462 (59.09%), Query Frame = 0


Query: 153 KSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRL 212
           K++  +VCS CG    QW+G C  C + G++++  V   S G +   L  Q +  + ++ 
Sbjct: 3   KARTKFVCSACGADHAQWFGRCPKCHEYGSLQEEIVNAVSSGTNHRSLGAQKSRSSKVKT 62

Query: 213 TDVNRGINAQDWRLPLPGPF---GNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAA 272
                 +     R    G F     E+ RVLGGG+VPG+L+LIGGDPG+GKSTLLLQ+A 
Sbjct: 63  GQPQAALTFSQIRQENQGRFLSGYGELDRVLGGGIVPGALILIGGDPGIGKSTLLLQVAF 122

Query: 273 ILAEGCGEGGSKSVVYVSGEESVEQIGNRADRLKI-----------------QTENLFLY 332
            LA          ++YVS EES +QI  RA RL I                    NLF+ 
Sbjct: 123 QLATRL-----PRILYVSAEESGQQIKLRATRLGITQTVEPSQAQDGINNLAHDGNLFVL 182

Query: 333 SSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIP 392
             T+++DI  +++ L P+  IIDSIQ +Y   ++ + G ++QV+ECT   ++ AK   I 
Sbjct: 183 PETNLDDILRELEALQPQVAIIDSIQNLYFPALSSAPGSVSQVRECTGLLMQLAKRDHIS 242

Query: 393 ILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLP 452
           + ++GHV K G +AGP++LEH+VD VLY +G++ + HRLLR VKNRFG+T E+G+FEM+ 
Sbjct: 243 LFIVGHVTKEGAIAGPKVLEHLVDTVLYFQGDRFASHRLLRSVKNRFGATQEIGIFEMVQ 302

Query: 453 SGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQALCSSSS--SFVTH 512
           SGL+ V NPS++F          E ++G A+ V  +GT+  ++E+QAL S +S  S    
Sbjct: 303 SGLQEVLNPSQLFL-----GSREEFMSGTAITVACEGTRPLVVELQALVSPTSYASPRRS 362

Query: 513 VNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFN 572
             G+   R   +++VL K+ G+ L     +++V  G+ + E A DLA+A+A+ +SF +  
Sbjct: 363 TTGVDYNRLLQVLAVLEKRLGVPLSKLDAYLSVAGGLEVEEPAVDLAMAIALVASFRDRV 422

Query: 573 IPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPK 593
           +   +  +GEIGLGG++R V ++E R+   AKLGFK+ +VPK
Sbjct: 423 VDPTMIILGEIGLGGQIRPVSQLEIRLKEAAKLGFKKAIVPK 454

[Close]

BLAST of Cmc04g0099941 vs. ExPASy TrEMBL
Match: A0A5D3C9C8 (DNA repair protein RadA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00200 PE=4 SV=1)

HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 635/636 (99.84%), Postives = 635/636 (99.84%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60
           MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD
Sbjct: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60

Query: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120
           ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS
Sbjct: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120

Query: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180
           LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV
Sbjct: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180

Query: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240
           GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL
Sbjct: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240

Query: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300
           GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD
Sbjct: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300

Query: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360
           RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS
Sbjct: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360

Query: 361 AFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420
           AFLRYAKTTGIPI LIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG
Sbjct: 361 AFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420

Query: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480
           STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL
Sbjct: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480

Query: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540
           CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM
Sbjct: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540

Query: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600
           AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV
Sbjct: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600

Query: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 637
           VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF
Sbjct: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 636

[Close]

BLAST of Cmc04g0099941 vs. ExPASy TrEMBL
Match: A0A1S3BHR0 (DNA repair protein RadA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489983 PE=4 SV=1)

HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 635/636 (99.84%), Postives = 635/636 (99.84%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60
           MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD
Sbjct: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60

Query: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120
           ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS
Sbjct: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120

Query: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180
           LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV
Sbjct: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180

Query: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240
           GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL
Sbjct: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240

Query: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300
           GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD
Sbjct: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300

Query: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360
           RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS
Sbjct: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360

Query: 361 AFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420
           AFLRYAKTTGIPI LIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG
Sbjct: 361 AFLRYAKTTGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420

Query: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480
           STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL
Sbjct: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480

Query: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540
           CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM
Sbjct: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540

Query: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600
           AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV
Sbjct: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600

Query: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 637
           VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF
Sbjct: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 636

[Close]

BLAST of Cmc04g0099941 vs. ExPASy TrEMBL
Match: A0A0A0LBL7 (RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G434980 PE=4 SV=1)

HSP 1 Score: 1123.6 bits (2905), Expect = 0.0e+00
Identity = 576/636 (90.57%), Postives = 596/636 (93.71%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLSTD 60
           M LLDM SLRTI YSRKHFLISS+FSSY TSPISCR  L+PNSSLFHY      AHLST 
Sbjct: 1   MHLLDMNSLRTILYSRKHFLISSTFSSYTTSPISCRFYLAPNSSLFHY------AHLSTH 60

Query: 61  ARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDS 120
           A N DPLAGSGPE+EK RNVWS+YGSVSSKL TQRVGSS DGK+PE S+GV NGDG+ED 
Sbjct: 61  APNADPLAGSGPEHEKGRNVWSIYGSVSSKLATQRVGSSIDGKDPEPSIGVQNGDGSEDL 120

Query: 121 LNEKTSESVRKVGLDDKLTCKTNSGKLAGLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKV 180
           LN+KTSESVRKVGL+D+LTCK NSGK+ GLKKK+KVSWVCS+CGHSEGQWWGTCQSC  V
Sbjct: 121 LNKKTSESVRKVGLEDRLTCKPNSGKVVGLKKKNKVSWVCSNCGHSEGQWWGTCQSCHMV 180

Query: 181 GTMKQFSVGNDSEGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVL 240
           GTMKQFSVGNDS G  RTWLPK+VTNVNP+RLTDVNRGIN QDWRLPLPGPFGNEVARVL
Sbjct: 181 GTMKQFSVGNDSGGERRTWLPKEVTNVNPLRLTDVNRGINTQDWRLPLPGPFGNEVARVL 240

Query: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300
           GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD
Sbjct: 241 GGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRAD 300

Query: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTS 360
           RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGI+QVKECTS
Sbjct: 301 RLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGISQVKECTS 360

Query: 361 AFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420
           AFLR+AK TGIPI LIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG
Sbjct: 361 AFLRFAKITGIPIFLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFG 420

Query: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQAL 480
           STDELGVFEMLPSGLEVVSNPSEMFRRDHNGN NSEHLTGLAVAVVMDGTQTFLLEIQAL
Sbjct: 421 STDELGVFEMLPSGLEVVSNPSEMFRRDHNGNFNSEHLTGLAVAVVMDGTQTFLLEIQAL 480

Query: 481 CSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAM 540
           CSSS SF THVNGIQNRRADMIISVLMKQ GLKLQT+ IFINVVSGVTLTETAGDLAIAM
Sbjct: 481 CSSSRSFDTHVNGIQNRRADMIISVLMKQVGLKLQTSTIFINVVSGVTLTETAGDLAIAM 540

Query: 541 AICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGV 600
           AICSSFLE +IPNDIAFIGEIGL GELRMVGRMEKRINTVAKLGFKRCVVPKSA NCLGV
Sbjct: 541 AICSSFLESHIPNDIAFIGEIGLSGELRMVGRMEKRINTVAKLGFKRCVVPKSAVNCLGV 600

Query: 601 VGLGKMKLIGCTNLKDVINNVFMVRDEVTTPSMASF 637
           VGLG+MKLIGCTNLKDVINNVFMVRDEVTTPSM SF
Sbjct: 601 VGLGEMKLIGCTNLKDVINNVFMVRDEVTTPSMGSF 630

[Close]

BLAST of Cmc04g0099941 vs. ExPASy TrEMBL
Match: A0A6J1ITP4 (uncharacterized protein LOC111479856 OS=Cucurbita maxima OX=3661 GN=LOC111479856 PE=4 SV=1)

HSP 1 Score: 957.2 bits (2473), Expect = 3.4e-275
Identity = 509/647 (78.67%), Postives = 547/647 (84.54%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60
           MQL DMKSLRTIF+SRKHFLIS+  SS   SPIS RS L+P+SSLFH A RFN A LST 
Sbjct: 1   MQLSDMKSLRTIFFSRKHFLISTISSSSTPSPISSRSRLNPSSSLFHCAGRFNAAQLSTT 60

Query: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLG------- 120
              A NG+ LA SGP N K R VW++Y  V+SKL TQRV SSSD K+PE S G       
Sbjct: 61  DVPAPNGNCLAASGPGNGKDRGVWTIYDPVTSKLLTQRVKSSSDRKDPEPSFGNETFGAS 120

Query: 121 VLNGDGAEDSLNEKTSESVRKVGLDDKLTCKTNSGKLAG-LKKKSKVSWVCSDCGHSEGQ 180
             NGDG E+ LNEKTSESVRKVGL+     +   GK+ G  KKKSKVSWVCS CGHSEGQ
Sbjct: 121 SRNGDGTEEFLNEKTSESVRKVGLEGGSVSRPKLGKIVGSKKKKSKVSWVCSSCGHSEGQ 180

Query: 181 WWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMRLTDVNRGI 240
           WWGTC+SC  VGTMKQF+ G+D+ GGS          R WLPKQ T+V+P+RLTDVNRGI
Sbjct: 181 WWGTCRSCDMVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGI 240

Query: 241 NAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGG 300
           N  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAAILAE CGEG 
Sbjct: 241 NTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGD 300

Query: 301 SKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360
             SV+YVSGEESV+QIGNRADRL I+TENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT
Sbjct: 301 LTSVIYVSGEESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQT 360

Query: 361 VYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVL 420
           VYLQ VAGSAGGI QVKECTSA LR+AK TGIPILLIGHVNKSGEVAGPR+LEHIVDVVL
Sbjct: 361 VYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVL 420

Query: 421 YVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLT 480
           Y+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+N N NSE+L 
Sbjct: 421 YMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLA 480

Query: 481 GLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAI 540
           GLAVAV+MDGT+TFLLEIQALC S SS   HVNGIQ  +ADMIISVLMKQAGLKLQ + I
Sbjct: 481 GLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAGLKLQDSVI 540

Query: 541 FINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINT 600
           F+NVVSGVTLTETAGDLAIAMAICSSFLEF IPNDIAFIGEIGLGGELRMV RMEKRINT
Sbjct: 541 FLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINT 600

Query: 601 VAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRD 627
           V+KLGFKRCVVPKSAE CLGVV LG+ +LIGC NLKDVIN+VFM RD
Sbjct: 601 VSKLGFKRCVVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARD 647

[Close]

BLAST of Cmc04g0099941 vs. ExPASy TrEMBL
Match: A0A6J1GX44 (uncharacterized protein LOC111457955 OS=Cucurbita moschata OX=3662 GN=LOC111457955 PE=4 SV=1)

HSP 1 Score: 944.5 bits (2440), Expect = 2.3e-271
Identity = 509/655 (77.71%), Postives = 544/655 (83.05%), Query Frame = 0


Query: 1   MQLLDMKSLRTIFYSRKHFLISSSFSSYKTSPISCRSSLSPNSSLFHYAPRFNTAHLST- 60
           MQ  DMKSLRTIF+SRKHFLIS+         IS RS L+PNSSLFH A RF+ A LST 
Sbjct: 1   MQFSDMKSLRTIFFSRKHFLIST---------ISSRSRLNPNSSLFHCAGRFHAAKLSTI 60

Query: 61  --DARNGDPLAGSGPENEKRRNVWSLYGSVSSKLTTQRVGSSSDGKEPEQSLG------- 120
              A NGD LA SGP N K R+VW++Y  V+SKL TQRV SSSDGKEPE S G       
Sbjct: 61  GVPAPNGDRLATSGPGNGKGRDVWTIYDPVTSKLLTQRVKSSSDGKEPEPSFGNETFGAS 120

Query: 121 VLNGDGAEDSLNEKTSE--------SVRKVGLDDKLTCKTNSGKLAG-LKKKSKVSWVCS 180
             NGDGAE+  NEKTSE        SVRKVGL+     + N GK+ G  KKKSKVSWVCS
Sbjct: 121 SRNGDGAEEFSNEKTSEFLNEKTSGSVRKVGLEGGSVSRPNLGKIVGSKKKKSKVSWVCS 180

Query: 181 DCGHSEGQWWGTCQSCRKVGTMKQFSVGNDSEGGS----------RTWLPKQVTNVNPMR 240
            CGHSEGQWWGTC+SC  VGTMKQFS G+D+ GGS          R WLPKQ T+V+P+R
Sbjct: 181 SCGHSEGQWWGTCRSCDMVGTMKQFSEGDDTGGGSRGFEVSEKMVRAWLPKQATDVHPLR 240

Query: 241 LTDVNRGINAQDWRLPLPGPFGNEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQIAAIL 300
           LTDVNRGIN  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQIAAIL
Sbjct: 241 LTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIL 300

Query: 301 AEGCGEGGSKSVVYVSGEESVEQIGNRADRLKIQTENLFLYSSTDVEDIFEKIQPLSPRA 360
           AEG  EG   SV+YVSGEESVEQIGNRADRL I+TENLFLYSSTDVEDIFEKIQPLSPRA
Sbjct: 301 AEGRDEGDLTSVIYVSGEESVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRA 360

Query: 361 LIIDSIQTVYLQEVAGSAGGITQVKECTSAFLRYAKTTGIPILLIGHVNKSGEVAGPRLL 420
           LI+DSIQTVYLQ VAGSAGGI QVKECTSA LR+AK TGIPI LIGHVNKSGEVAGPR+L
Sbjct: 361 LIVDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPIFLIGHVNKSGEVAGPRVL 420

Query: 421 EHIVDVVLYVEGEKCSLHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNG 480
           EHIVDVVLY+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN 
Sbjct: 421 EHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA 480

Query: 481 NLNSEHLTGLAVAVVMDGTQTFLLEIQALCSSSSSFVTHVNGIQNRRADMIISVLMKQAG 540
           NL+SE+L GLAVAV+MDGT+TFLLEIQALC S SS   HVNGIQ  +ADMIISVLMKQAG
Sbjct: 481 NLSSEYLAGLAVAVIMDGTRTFLLEIQALCLSRSSVSRHVNGIQQSKADMIISVLMKQAG 540

Query: 541 LKLQTNAIFINVVSGVTLTETAGDLAIAMAICSSFLEFNIPNDIAFIGEIGLGGELRMVG 600
           LKLQ + IF+NVVSGVTLTETAGDLAIAMAICSSFLEF IPNDIAFIGEIGLGGELRMV 
Sbjct: 541 LKLQDSVIFLNVVSGVTLTETAGDLAIAMAICSSFLEFPIPNDIAFIGEIGLGGELRMVS 600

Query: 601 RMEKRINTVAKLGFKRCVVPKSAENCLGVVGLGKMKLIGCTNLKDVINNVFMVRD 627
           RMEKRINTVAKLGFKRCVVPKSAE CLGVV  G+M+LIGC NLKDVIN+VFM RD
Sbjct: 601 RMEKRINTVAKLGFKRCVVPKSAEKCLGVVESGEMRLIGCRNLKDVINDVFMARD 646

[Close]

BLAST of Cmc04g0099941 vs. TAIR 10
Match: AT5G50340.1 (ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases )

HSP 1 Score: 629.4 bits (1622), Expect = 3.1e-180
Identity = 335/561 (59.71%), Postives = 418/561 (74.51%), Query Frame = 0


Query: 87  VSSKLTTQRVGSSSDGKEPEQSLGVLNGDGAEDSLNEKTSESVRKVGLDDKLTCKT---- 146
           V  +L  +R+ SS     P  S+  L+    + + N +  ++  K+G  D  + K+    
Sbjct: 35  VRFRLRLRRLSSS-----PVASVFDLHSSNQDANSNREDKDT--KIGFSDDKSRKSGSNP 94

Query: 147 ---NSGKLA---GLKKKSKVSWVCSDCGHSEGQWWGTCQSCRKVGTMKQFSVGNDS---- 206
              N G++      K KSK  WVC  CGHSEGQWWG+C++C KVGTMK+FS G++S    
Sbjct: 95  PRWNPGEVVMNKSKKGKSKTVWVCESCGHSEGQWWGSCRACHKVGTMKRFSEGSESSASG 154

Query: 207 -----------EGGSRTWLPKQVTNVNPMRLTDVNRGINAQDWRLPLPGPFGNEVARVLG 266
                      EG   +WLP+Q T V P RLTDV  GI  Q WR+ LPG FGNEVARVLG
Sbjct: 155 GGGNGTGLGFTEGKGLSWLPEQAT-VQPHRLTDVIHGITQQQWRISLPGLFGNEVARVLG 214

Query: 267 GGLVPGSLVLIGGDPGVGKSTLLLQIAAILAEGCGEGGSKSVVYVSGEESVEQIGNRADR 326
           GGL PGSL+LIGGDPG+GKSTLLLQIA+I+AEG        V+Y+SGEESVEQIG+RADR
Sbjct: 215 GGLAPGSLILIGGDPGIGKSTLLLQIASIIAEGSELAEPAPVLYISGEESVEQIGSRADR 274

Query: 327 LKIQTENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQEVAGSAGGITQVKECTSA 386
           ++IQTE L+L+SS+D++DI  K   LSPRALIIDSIQTVYL++V GSAGG+TQVKECTS 
Sbjct: 275 MRIQTEELYLFSSSDLQDILNKAHRLSPRALIIDSIQTVYLKDVTGSAGGLTQVKECTST 334

Query: 387 FLRYAKTTGIPILLIGHVNKSGEVAGPRLLEHIVDVVLYVEGEKCSLHRLLRPVKNRFGS 446
            LR+AK + IP+ L+GHV K+G++AGPR+LEHIVDVVLY+EGE+ S +RLLR VKNRFGS
Sbjct: 335 LLRFAKKSNIPVFLVGHVTKAGDIAGPRVLEHIVDVVLYLEGEESSTYRLLRSVKNRFGS 394

Query: 447 TDELGVFEMLPSGLEVVSNPSEMFRRDHNGNLNSEHLTGLAVAVVMDGTQTFLLEIQALC 506
           TDELGVFEM  SGLEVVSNPS ++    N   +S+ L GLAVAVVMDG+++FL+E+QALC
Sbjct: 395 TDELGVFEMANSGLEVVSNPSGIYLSQQNP--DSDVLAGLAVAVVMDGSRSFLIEVQALC 454

Query: 507 SSSSSFVTHVNGIQNRRADMIISVLMKQAGLKLQTNAIFINVVSGVTLTETAGDLAIAMA 566
           S  S+   HVNG+Q  RADMII+VLMKQAGL++Q N IF+NV +G+ L+ETAGDLAIA A
Sbjct: 455 SPGSTVSRHVNGVQASRADMIIAVLMKQAGLRIQENGIFLNVANGMALSETAGDLAIAAA 514

Query: 567 ICSSFLEFNIPNDIAFIGEIGLGGELRMVGRMEKRINTVAKLGFKRCVVPKSAENCLGVV 623
           ICSSFLEF IP+ +AFIGEIGLGGE+R V RMEKR++TVAKLGF +CVVPKS E  L  +
Sbjct: 515 ICSSFLEFPIPHGVAFIGEIGLGGEVRTVPRMEKRVSTVAKLGFNKCVVPKSVEESLKAL 574

The following BLAST results are available for this feature:

BLAST of Cmc04g0099941 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447567.1	0.0e+00	99.84	PREDICTED: DNA repair protein RadA isoform X1 [Cucumis melo] >KAA0050859.1 DNA r...	[more]
XP_011651479.1	0.0e+00	90.57	uncharacterized protein LOC101217616 [Cucumis sativus] >KGN58017.1 hypothetical ...	[more]
XP_038906306.1	1.9e-280	78.92	DNA repair protein RadA [Benincasa hispida]	[more]
XP_022980476.1	7.0e-275	78.67	uncharacterized protein LOC111479856 [Cucurbita maxima]	[more]
XP_023527681.1	1.1e-272	78.67	uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc04g0099941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9KGG1	1.5e-97	42.95	DNA repair protein RadA OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 ...	[more]
P37572	1.3e-93	42.74	DNA repair protein RadA OS=Bacillus subtilis (strain 168) OX=224308 GN=radA PE=1...	[more]
Q92F42	2.4e-92	42.51	DNA repair protein RadA OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CL...	[more]
Q48761	2.0e-91	42.28	DNA repair protein RadA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-...	[more]
P74391	4.4e-86	38.74	DNA repair protein RadA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]

BLAST of Cmc04g0099941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9C8	0.0e+00	99.84	DNA repair protein RadA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BHR0	0.0e+00	99.84	DNA repair protein RadA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489983 PE=4 ...	[more]
A0A0A0LBL7	0.0e+00	90.57	RECA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G434980 PE=4...	[more]
A0A6J1ITP4	3.4e-275	78.67	uncharacterized protein LOC111479856 OS=Cucurbita maxima OX=3661 GN=LOC111479856...	[more]
A0A6J1GX44	2.3e-271	77.71	uncharacterized protein LOC111457955 OS=Cucurbita moschata OX=3662 GN=LOC1114579...	[more]

BLAST of Cmc04g0099941 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50340.1	3.1e-180	59.71	ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01874	DNAREPAIRADA	coord: 160..184 score: 33.54 coord: 374..402 score: 59.86 coord: 238..266 score: 80.37 coord: 486..509 score: 25.43 coord: 335..359 score: 43.59 coord: 409..435 score: 62.01
None	No IPR available	PFAM	PF13481	AAA_25	coord: 240..383 e-value: 3.6E-17 score: 62.5
None	No IPR available	PFAM	PF13541	ChlI	coord: 504..593 e-value: 1.5E-9 score: 37.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..106
None	No IPR available	PANTHER	PTHR32472:SF10	DNA REPAIR PROTEIN RADA-LIKE PROTEIN	coord: 153..623
None	No IPR available	PANTHER	PTHR32472	DNA REPAIR PROTEIN RADA	coord: 153..623
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 246..405 e-value: 2.0E-12 score: 57.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 235..438 e-value: 1.1E-35 score: 125.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 238..431
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 457..631 e-value: 1.0E-21 score: 79.5
IPR004504	DNA repair protein RadA	TIGRFAM	TIGR00416	TIGR00416	coord: 153..616 e-value: 1.1E-135 score: 450.9
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 226..379 score: 24.838026
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 416..622

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0099941.1	Cmc04g0099941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000725	recombinational repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140664	ATP-dependent DNA damage sensor activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding