Cmc04g0099681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0099681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 15488753 .. 15489832 (-)
RNA-Seq Expression	Cmc04g0099681
Synteny	Cmc04g0099681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATATGGAGATACTATTTGTTCGGGGAAAAGTGCCATTTTTCACAGATCATAAAAGTCTGA

mRNA sequence

ATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATATGGAGATACTATTTGTTCGGGGAAAAGTGCCATTTTTCACAGATCATAAAAGTCTGA

Coding sequence (CDS)

ATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAACATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATATGGAGATACTATTTGTTCGGGGAAAAGTGCCATTTTTCACAGATCATAAAAGTCTGA

Protein sequence

MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCHFSQIIKV

Homology

[Close]

BLAST of Cmc04g0099681 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 713.4 bits (1840), Expect = 1.0e-201
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 1016

[Close]

BLAST of Cmc04g0099681 vs. NCBI nr
Match: KAA0037582.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 713.4 bits (1840), Expect = 1.0e-201
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 249 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 308

Query: 61  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 309 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 368

Query: 121 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 369 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 428

Query: 181 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 429 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 488

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 489 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 548

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 549 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 600

[Close]

BLAST of Cmc04g0099681 vs. NCBI nr
Match: TYK27507.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 713.4 bits (1840), Expect = 1.0e-201
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 627 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 687 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 747 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 807 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 867 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 927 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 978

[Close]

BLAST of Cmc04g0099681 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 713.4 bits (1840), Expect = 1.0e-201
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 876  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 935

Query: 61   YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 936  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 995

Query: 121  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 996  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 1055

Query: 181  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 1056 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 1115

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 1116 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 1175

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 1176 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 1227

[Close]

BLAST of Cmc04g0099681 vs. NCBI nr
Match: KAA0041108.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 713.4 bits (1840), Expect = 1.0e-201
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 1084 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 1143

Query: 61   YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 1144 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 1203

Query: 121  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 1204 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 1263

Query: 181  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 1264 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 1323

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 1324 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 1383

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 1384 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 1435

[Close]

BLAST of Cmc04g0099681 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.1e-77
Identity = 139/353 (39.38%), Postives = 227/353 (64.31%), Query Frame = 0


Query: 7   KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKY 66
           +E++ Q+Q+++++G IR S SP+ +P+  V KK         R+ IDYR+LN++T+ +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+++    ++KT F T++GHYE+  MPFGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSK 186
           APA F   MN I    L++  +V++DDI+V+S   + H + L +V + L +  L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFS 246
           CEF  ++  FLGHV++  G+  +P+K+EA+  +  PT   E+++FLGL GYYR+FI +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RLALPLTALTRKNVKFEWSD-KCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 306
            +A P+T   +KN+K + ++ + + +F++LK  +   PIL +P   K + +  DAS + L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCHF 354
           G VL QDG+ ++Y SR L EHE NY T + EL A+V A K +R+YL G   HF
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGR--HF 571

[Close]

BLAST of Cmc04g0099681 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.8e-76
Identity = 142/350 (40.57%), Postives = 223/350 (63.71%), Query Frame = 0


Query: 8   ELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYP 67
           E++ Q+QE++++G IR S SP+ +P   V KK         R+ IDYR+LN++TI ++YP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+++ E  I+KT F T+ GHYE+  MPFGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKC 187
           PA F   MN I    L++  +V++DDI+++S     H   +++V   L +  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFSR 247
           EF  ++  FLGH+V+  G+  +P KV+A+V++  PT   E+R+FLGL GYYR+FI +++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 LALPLTALTRKNVKFEWSDKCE--QSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 307
           +A P+T+  +K  K + + K E  ++F++LK  ++  PIL LP   K +V+  DAS L L
Sbjct: 461 IAKPMTSCLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLAL 520

Query: 308 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEK 351
           G VL Q+G+ I++ SR L +HE NY   + EL A+V A K +R+YL G +
Sbjct: 521 GAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQ 569

[Close]

BLAST of Cmc04g0099681 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.8e-71
Identity = 147/361 (40.72%), Postives = 216/361 (59.83%), Query Frame = 0


Query: 8   ELKMQLQELVDKGYIRPSVSPWGAPVLFVKKK-----DGTLRLCIDYRQLNKVTIRNKYP 67
           E++ Q+ EL+  G IRPS SP+ +P+  V KK     +   R+ +D+++LN VTI + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNA 127
           +P I+     L  A  F+ +DL SG+HQ+ ++ESDI KT F T  G YEF  +PFGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKC 187
           PA+F  +++ I   ++ +   V+IDDI+V+S D ++H ++LR+VL +L +  L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFSR 247
            F   QV FLG++V+A G+  DP+KV A+     PTS  E++ FLG+  YYR+FI+D+++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 LALPLTALTR---KNVKFEWSDKCE--------QSFQELKKRLVTAPILALPVTGKDYVI 307
           +A PLT LTR    N+K   S K          QSF +LK  L ++ ILA P   K + +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YCDASRLGLGCVLMQD----GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLF 349
             DAS   +G VL QD       IAY SR L + E NY T + E+ A++ +L   R YL+
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLY 497

[Close]

BLAST of Cmc04g0099681 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 260.0 bits (663), Expect = 4.0e-68
Identity = 140/355 (39.44%), Postives = 214/355 (60.28%), Query Frame = 0


Query: 7   KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI 66
           +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLPRI
Sbjct: 636 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67  DDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVF 126
           D+L  ++  A +F+ +DL SGYHQ+ +   D  KT F T  G YE+ VMPFGL NAP+ F
Sbjct: 696 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127 MDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWL 186
              M   F     +FV V++DDIL++S   E H +HL  VL+ L+ + L  K  KC+F  
Sbjct: 756 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187 EQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFSRLALP 246
           E+  FLG+ +  + ++    K  A+ ++  P +  + + FLG+  YYRRFI + S++A P
Sbjct: 816 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247 LTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLM 306
           +        K +W++K +++ ++LK  L  +P+L +P   K +Y +  DAS+ G+G VL 
Sbjct: 876 IQLFICD--KSQWTEKQDKAIEKLKAALCNSPVL-VPFNNKANYRLTTDASKDGIGAVLE 935

Query: 307 QDGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCHFS 355
           +  N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +RY L G+  HF+
Sbjct: 936 EVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGK--HFT 983

[Close]

BLAST of Cmc04g0099681 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 259.2 bits (661), Expect = 6.8e-68
Identity = 140/355 (39.44%), Postives = 213/355 (60.00%), Query Frame = 0


Query: 7   KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI 66
           +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLPRI
Sbjct: 610 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67  DDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLTNAPAVF 126
           D+L  ++  A +F+ +DL SGYHQ+ +   D  KT F T  G YE+ VMPFGL NAP+ F
Sbjct: 670 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127 MDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWL 186
              M   F     +FV V++DDIL++S   E H +HL  VL+ L+ + L  K  KC+F  
Sbjct: 730 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187 EQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFSRLALP 246
           E+  FLG+ +  + ++    K  A+ ++  P +  + + FLG+  YYRRFI + S++A P
Sbjct: 790 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247 LTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLM 306
           +        K +W++K +++  +LK  L  +P+L +P   K +Y +  DAS+ G+G VL 
Sbjct: 850 IQLFICD--KSQWTEKQDKAIDKLKDALCNSPVL-VPFNNKANYRLTTDASKDGIGAVLE 909

Query: 307 QDGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCHFS 355
           +  N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +RY L G+  HF+
Sbjct: 910 EVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGK--HFT 957

[Close]

BLAST of Cmc04g0099681 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 627 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 687 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 747 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 807 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 867 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 927 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 978

[Close]

BLAST of Cmc04g0099681 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 1016

[Close]

BLAST of Cmc04g0099681 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 1016

[Close]

BLAST of Cmc04g0099681 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 297 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 356

Query: 61  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 357 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 416

Query: 121 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 417 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 476

Query: 181 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 477 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 536

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 537 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 596

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 597 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 648

[Close]

BLAST of Cmc04g0099681 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 4.8e-202
Identity = 349/352 (99.15%), Postives = 350/352 (99.43%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 876  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 935

Query: 61   YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTTFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT FRTRYGHYEFRVMPFGLT
Sbjct: 936  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 995

Query: 121  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 996  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 1055

Query: 181  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYRRFIEDF
Sbjct: 1056 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 1115

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 1116 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 1175

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRYYLFGEKCH 353
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWR+YLFGEKCH
Sbjct: 1176 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 1227

[Close]

BLAST of Cmc04g0099681 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-27
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 162 HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPTS 221
           HL +VLQ   + Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 ATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPI 281
            TE+R FLGL GYYRRF++++ ++  PLT L +KN   +W++    +F+ LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LALP 284
           LALP
Sbjct: 123 LALP 125

The following BLAST results are available for this feature:

BLAST of Cmc04g0099681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035455.1	1.0e-201	99.15	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
KAA0037582.1	1.0e-201	99.15	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK27507.1	1.0e-201	99.15	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0056684.1	1.0e-201	99.15	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0041108.1	1.0e-201	99.15	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0099681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	2.1e-77	39.38	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.8e-76	40.57	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	3.8e-71	40.72	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q7LHG5	4.0e-68	39.44	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	6.8e-68	39.44	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc04g0099681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	4.8e-202	99.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	4.8e-202	99.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	4.8e-202	99.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	4.8e-202	99.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7UNA3	4.8e-202	99.15	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73...	[more]

BLAST of Cmc04g0099681 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.5e-27	45.16	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 4.9E-86 score: 289.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..287 e-value: 1.3E-32 score: 113.6
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 259..351 e-value: 2.6E-30 score: 104.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.3E-28 score: 100.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 14.389848
None	No IPR available	GENE3D	3.10.20.370		coord: 288..353 e-value: 1.1E-5 score: 27.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 4.9E-86 score: 289.4
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..349
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..349
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.55422E-96 score: 282.562
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0099681.1	Cmc04g0099681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding