Cmc04g0097911 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0097911
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 13145779 .. 13146702 (-)
RNA-Seq Expression	Cmc04g0097911
Synteny	Cmc04g0097911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGTGAGTGTGGTGGATACTAGTGAGGTTGATGTGTCCTTGTCATCAGAACCAGTAGTGAGGGATCATCCAGATGTCTTTCCCGAAGAACTTCCAGGGTTACCTCCTCAGAGAGAGATTGAGTTTGCCATAGAACTGGAGCCTGTTACGGTTCCTATATCCAGAGCCCCATACAGAATGGCTCCAGCAGAGTTGAAAGAGCTGAAGGTGCAGTTACAAGAGTTGCTTGATAAAGGCTTCATTCGGTCGAGTGTGTCACCTTGGGGTGCACCAGTCTTATTTGTTAAGAAGAAGGATCGATCGATGCAACTATGTATTGACTACAGGGAGTTGAATAAGGTCACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGAACTTTTTGACCAGTTACAGGGAGCTATAGTGTTCTCTAAGATCGACCTTCGGTCTGGATATCATCTGCTGAGGATTAAGGATAGCGATGTACCAAAGACAGCCTTTCGTTCCAGATATAGACACTATGAGTTTATTCTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGATTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCTAAGACAGAGGCCGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTATATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTGGTGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTAGTTGGCCTCGACCTTCTACAGTTAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTACCGATGA

mRNA sequence

ATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGTGAGTGTGGTGGATACTAGTGAGGTTGATGTGTCCTTGTCATCAGAACCAGTAGTGAGGGATCATCCAGATGTCTTTCCCGAAGAACTTCCAGGGTTACCTCCTCAGAGAGAGATTGAGTTTGCCATAGAACTGGAGCCTGTTACGGTTCCTATATCCAGAGCCCCATACAGAATGGCTCCAGCAGAGTTGAAAGAGCTGAAGGTGCAGTTACAAGAGTTGCTTGATAAAGGCTTCATTCGGTCGAGTGTGTCACCTTGGGGTGCACCAGTCTTATTTGTTAAGAAGAAGGATCGATCGATGCAACTATGTATTGACTACAGGGAGTTGAATAAGGTCACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGAACTTTTTGACCAGTTACAGGGAGCTATAGTGTTCTCTAAGATCGACCTTCGGTCTGGATATCATCTGCTGAGGATTAAGGATAGCGATGTACCAAAGACAGCCTTTCGTTCCAGATATAGACACTATGAGTTTATTCTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGATTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCTAAGACAGAGGCCGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTATATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTGGTGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTAGTTGGCCTCGACCTTCTACAGTTAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTACCGATGA

Coding sequence (CDS)

ATGAGGGCCAGCAAACTGCTTAGTCAGGGTACTTGGAGTATCTTAGTGAGTGTGGTGGATACTAGTGAGGTTGATGTGTCCTTGTCATCAGAACCAGTAGTGAGGGATCATCCAGATGTCTTTCCCGAAGAACTTCCAGGGTTACCTCCTCAGAGAGAGATTGAGTTTGCCATAGAACTGGAGCCTGTTACGGTTCCTATATCCAGAGCCCCATACAGAATGGCTCCAGCAGAGTTGAAAGAGCTGAAGGTGCAGTTACAAGAGTTGCTTGATAAAGGCTTCATTCGGTCGAGTGTGTCACCTTGGGGTGCACCAGTCTTATTTGTTAAGAAGAAGGATCGATCGATGCAACTATGTATTGACTACAGGGAGTTGAATAAGGTCACCGTTAAGAACAAATATCCCTTGCCTAGGATCGACGAACTTTTTGACCAGTTACAGGGAGCTATAGTGTTCTCTAAGATCGACCTTCGGTCTGGATATCATCTGCTGAGGATTAAGGATAGCGATGTACCAAAGACAGCCTTTCGTTCCAGATATAGACACTATGAGTTTATTCTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTCATGGATTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCTAAGACAGAGGCCGAGCATGAGGAGCATTTACGCATGGTTCTAGAAACCCTTCGAGCTAATAAATTATATGCAAAGTTCTCAAAATGTGAGTTTTGGTTGAAGCAGGTATCCTTTCTAGGCCATGTGGTTTCTAAAGCTGGTGTTTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTAGTTGGCCTCGACCTTCTACAGTTAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTACCGATGA

Protein sequence

MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIELEPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCIDYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRYRHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYR

Homology

[Close]

BLAST of Cmc04g0097911 vs. NCBI nr
Match: KAA0066266.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.5 bits (1456), Expect = 2.9e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
           +RASKLLSQGTW IL SVVDT E DVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 81  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 140

Query: 61  EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
           EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 141 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 200

Query: 121 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 201 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 260

Query: 181 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 261 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 320

Query: 241 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 321 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 380

Query: 301 GLAGYYR 308
           GLAGYYR
Sbjct: 381 GLAGYYR 387

[Close]

BLAST of Cmc04g0097911 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.5 bits (1456), Expect = 2.9e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
           +RASKLLSQGTW IL SVVDT E DVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 507 IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 566

Query: 61  EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
           EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 567 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 626

Query: 121 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 627 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 686

Query: 181 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 687 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 746

Query: 241 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 747 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 806

Query: 301 GLAGYYR 308
           GLAGYYR
Sbjct: 807 GLAGYYR 813

[Close]

BLAST of Cmc04g0097911 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.5 bits (1456), Expect = 2.9e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
            +RASKLLSQGTW IL SVVDT E DVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 761  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 820

Query: 61   EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
            EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 821  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 880

Query: 121  DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 881  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 940

Query: 181  RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
             HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 941  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 1000

Query: 241  ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 1001 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1060

Query: 301  GLAGYYR 308
            GLAGYYR
Sbjct: 1061 GLAGYYR 1067

[Close]

BLAST of Cmc04g0097911 vs. NCBI nr
Match: KAA0047433.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.5 bits (1456), Expect = 2.9e-157
Identity = 284/307 (92.51%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
            +RASKLLSQGTW IL SVVDT EVDVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 990  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 1049

Query: 61   EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
            EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 1050 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1109

Query: 121  DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 1110 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 1169

Query: 181  RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
             HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VL
Sbjct: 1170 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL 1229

Query: 241  ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 1230 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1289

Query: 301  GLAGYYR 308
            GLAGYYR
Sbjct: 1290 GLAGYYR 1296

[Close]

BLAST of Cmc04g0097911 vs. NCBI nr
Match: KAA0046085.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 564.7 bits (1454), Expect = 4.9e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
           +RASKLLSQGTW IL SVVDT EVDVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 304 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 363

Query: 61  EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
           EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 364 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 423

Query: 121 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 424 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 483

Query: 181 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 484 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 543

Query: 241 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 544 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 603

Query: 301 GLAGYYR 308
            LAGYYR
Sbjct: 604 SLAGYYR 610

[Close]

BLAST of Cmc04g0097911 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.9e-50
Identity = 96/247 (38.87%), Postives = 152/247 (61.54%), Query Frame = 0


Query: 66  PISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKD-----RSMQLCI 125
           PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         ++ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 126 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 185
           DYR+LN++T+ ++YP+P +DE+  +L     F+ IDL  G+H + + +  + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 186 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 245
            HYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 246 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 305
             L    L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+ S+P P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 306 GLAGYYR 308
           GL GYYR
Sbjct: 446 GLTGYYR 452

[Close]

BLAST of Cmc04g0097911 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-49
Identity = 94/241 (39.00%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 72  YRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKD-----RSMQLCIDYRELN 131
           Y    A  +E++ Q+Q++L++G IR+S SP+ +P+  V KK      +  ++ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 132 KVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRYRHYEFI 191
           ++TV +++P+P +DE+  +L     F+ IDL  G+H + +    V KTAF +++ HYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 192 LMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLETLRAN 251
            M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V E L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 252 KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYY 308
            L  +  KCEF  ++ +FLGHV++  G+  +P KIEA+  +P P+   E+++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

[Close]

BLAST of Cmc04g0097911 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 95/265 (35.85%), Postives = 160/265 (60.38%), Query Frame = 0


Query: 43  EELPGLPPQREIEFAIELEPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPW 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDRSMQLCIDYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYH 162
             PV+FV KK+ ++++ +DY+ LNK    N YPLP I++L  ++QG+ +F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 LLRIKDSDVPKTAFRSRYRHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
           L+R++  D  K AFR     +E+++M +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSEVRSFLGLAGYYR 308
            V  W +P    E+R FLG   Y R
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLR 653

[Close]

BLAST of Cmc04g0097911 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 95/265 (35.85%), Postives = 160/265 (60.38%), Query Frame = 0


Query: 43  EELPGLPPQREIEFAIELEPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPW 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDRSMQLCIDYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYH 162
             PV+FV KK+ ++++ +DY+ LNK    N YPLP I++L  ++QG+ +F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 LLRIKDSDVPKTAFRSRYRHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
           L+R++  D  K AFR     +E+++M +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSEVRSFLGLAGYYR 308
            V  W +P    E+R FLG   Y R
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLR 653

[Close]

BLAST of Cmc04g0097911 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 95/265 (35.85%), Postives = 160/265 (60.38%), Query Frame = 0


Query: 43  EELPGLPPQREIEFAIELEPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPW 102
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 103 GAPVLFVKKKDRSMQLCIDYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYH 162
             PV+FV KK+ ++++ +DY+ LNK    N YPLP I++L  ++QG+ +F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 163 LLRIKDSDVPKTAFRSRYRHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 222
           L+R++  D  K AFR     +E+++M +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 223 LIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 282
           LI+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 283 AVTSWPRPSTVSEVRSFLGLAGYYR 308
            V  W +P    E+R FLG   Y R
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLR 653

[Close]

BLAST of Cmc04g0097911 vs. ExPASy TrEMBL
Match: A0A5A7VIT9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003090 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
           +RASKLLSQGTW IL SVVDT E DVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 81  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 140

Query: 61  EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
           EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 141 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 200

Query: 121 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 201 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 260

Query: 181 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 261 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 320

Query: 241 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 321 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 380

Query: 301 GLAGYYR 308
           GLAGYYR
Sbjct: 381 GLAGYYR 387

[Close]

BLAST of Cmc04g0097911 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
            +RASKLLSQGTW IL SVVDT E DVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 761  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 820

Query: 61   EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
            EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 821  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 880

Query: 121  DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 881  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 940

Query: 181  RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
             HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 941  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 1000

Query: 241  ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 1001 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1060

Query: 301  GLAGYYR 308
            GLAGYYR
Sbjct: 1061 GLAGYYR 1067

[Close]

BLAST of Cmc04g0097911 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
           +RASKLLSQGTW IL SVVDT E DVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 507 IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 566

Query: 61  EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
           EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 567 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 626

Query: 121 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 627 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 686

Query: 181 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 687 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 746

Query: 241 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 747 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 806

Query: 301 GLAGYYR 308
           GLAGYYR
Sbjct: 807 GLAGYYR 813

[Close]

BLAST of Cmc04g0097911 vs. ExPASy TrEMBL
Match: A0A5A7TV57 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00240 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157
Identity = 284/307 (92.51%), Postives = 293/307 (95.44%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
            +RASKLLSQGTW IL SVVDT EVDVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 990  IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 1049

Query: 61   EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
            EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 1050 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1109

Query: 121  DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
            DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 1110 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 1169

Query: 181  RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
             HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VL
Sbjct: 1170 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL 1229

Query: 241  ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 1230 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1289

Query: 301  GLAGYYR 308
            GLAGYYR
Sbjct: 1290 GLAGYYR 1296

[Close]

BLAST of Cmc04g0097911 vs. ExPASy TrEMBL
Match: A0A5A7TXE4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00060 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILVSVVDTSEVDVSLSSEPVVRDHPDVFPEELPGLPPQREIEFAIEL 60
           +RASKLLSQGTW IL SVVDT EVDVSLSSEPVVRD+PDVFPEELPGLPP RE+EFAIEL
Sbjct: 304 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 363

Query: 61  EPVTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDRSMQLCI 120
           EP TVPISRAPYRMAPAELKELKVQLQELLDKGFIR SVSPWGAPVLFVKKKD SM+LCI
Sbjct: 364 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 423

Query: 121 DYRELNKVTVKNKYPLPRIDELFDQLQGAIVFSKIDLRSGYHLLRIKDSDVPKTAFRSRY 180
           DYRELNKVTVKN+YPLPRID+LFDQLQGA VFSKIDLRSGYH LRIKD DVPKTAFRSRY
Sbjct: 424 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 483

Query: 181 RHYEFILMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 240
            HYEFI+MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL
Sbjct: 484 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 543

Query: 241 ETLRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           +TLR NKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 544 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 603

Query: 301 GLAGYYR 308
            LAGYYR
Sbjct: 604 SLAGYYR 610

[Close]

BLAST of Cmc04g0097911 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-15
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 235 HLRMVLETLRANKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWPRPST 294
           HL MVL+    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VSEVRSFLGLAGYYR 308
            +E+R FLGL GYYR
Sbjct: 63  TTELRGFLGLTGYYR 77

The following BLAST results are available for this feature:

BLAST of Cmc04g0097911 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066266.1	2.9e-157	92.51	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	2.9e-157	92.51	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	2.9e-157	92.51	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047433.1	2.9e-157	92.51	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046085.1	4.9e-157	92.51	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0097911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.9e-50	38.87	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.2e-49	39.00	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	1.9e-47	35.85	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.9e-47	35.85	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.9e-47	35.85	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0097911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIT9	1.4e-157	92.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5D3BPI1	1.4e-157	92.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	1.4e-157	92.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7TV57	1.4e-157	92.51	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TXE4	2.4e-157	92.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15...	[more]

BLAST of Cmc04g0097911 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.5e-15	49.33	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 110..268 e-value: 1.1E-24 score: 87.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..269 score: 9.347095
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..269 e-value: 1.0E-88 score: 298.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 279..307 e-value: 3.1E-8 score: 35.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 54..194 e-value: 1.0E-88 score: 298.2
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..307
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 66..307
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..269 e-value: 1.24689E-90 score: 265.613
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0097911.1	Cmc04g0097911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding