Cmc04g0097061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0097061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	acanthoscurrin-2-like
Location	CMiso1.1chr04: 11758764 .. 11759678 (+)
RNA-Seq Expression	Cmc04g0097061
Synteny	Cmc04g0097061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTTATGAGAGAGAGTTAAGACATTCATGAGGTTCATGTTACTCAAACCTAAATTCACAATGGATCCTATGCCATAGCATTAACTAAAGTTGGCTAGCCCTATTCAATTTTCCCCCAACAGTCCACCGTCTTCTATTCCCTTTAAGAAGACACAAATTTGATATCATTTCACCACACAGAAAAGAGGCCTTGAAATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACAAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTCGTAATGTCTGGGAGTTTCTTTAGGGTTTATAAGAAAAGATAAGTAATATGTGTGTTTTGGTTTGTGATTTTAGTTAAATACATCTTGTTGGCAAGGATGCTTGTGTGAAGAAGATTTAGGTGCTATCCTTTTTTAAGTGTAGGAATAAATATAATAATATATGTTTTTTTTGTTCCCAATTCTCTCTCTCTCTCTCTCGTTTTATTTTTTCAGTCTTCCCTTTCAATTGTCAATGTTATAAAATCACAAAAGTAAAATAACACAAGGTAAAGTGTAATGCCTTCTTGTAATTTTATATTTTACAATAA

mRNA sequence

TAACTTATGAGAGAGAGTTAAGACATTCATGAGGTTCATGTTACTCAAACCTAAATTCACAATGGATCCTATGCCATAGCATTAACTAAAGTTGGCTAGCCCTATTCAATTTTCCCCCAACAGTCCACCGTCTTCTATTCCCTTTAAGAAGACACAAATTTGATATCATTTCACCACACAGAAAAGAGGCCTTGAAATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACAAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAAAGTATTAATCTTAGAGTGGGGGTTTACAAAATTTGGTGTGTTCTTTTTATGTGTTTCGTAATGTCTGGGAGTTTCTTTAGGGTTTATAAGAAAAGATAAGTAATATGTGTGTTTTGGTTTGTGATTTTAGTTAAATACATCTTGTTGGCAAGGATGCTTGTGTGAAGAAGATTTAGGTGCTATCCTTTTTTAAGTGTAGGAATAAATATAATAATATATGTTTTTTTTGTTCCCAATTCTCTCTCTCTCTCTCTCGTTTTATTTTTTCAGTCTTCCCTTTCAATTGTCAATGTTATAAAATCACAAAAGTAAAATAACACAAGGTAAAGTGTAATGCCTTCTTGTAATTTTATATTTTACAATAA

Coding sequence (CDS)

ATGGCAAATTACAAGCTTAATTTGATGTTGGTTATGGCTATGGCTGCACTTGCACTCCATGTTGCTGCAAGAACTGCCCCAAATGAGGCGGCAAAAGGTCTCAATGACAAAAAGAACTTCCTCAACTATGGTGGAGTTGGTGGTTTCTCTGGCATTGGTGACGGTGGACTCCCCTTCGGAGGCGGTTTCGGCGGGGGAGGGCTTGGAGGAGGTGGTGGCTTAGGCGGGCTTGGTGGCGGCGTTGGCGGATTCGGTGGGGTTGGCATTGGTGGTATTGGTGGCGGAGTTGGAGGTGGCGTGATAGGGGGAATCGGTGGGATTGGTGGTGGTGGTGGACTCGTTAAACTTCCTTAA

Protein sequence

MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLPFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP

Homology

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BLAST of Cmc04g0097061 vs. NCBI nr
Match: XP_008447334.1 (PREDICTED: acanthoscurrin-2-like [Cucumis melo] >KAA0053623.1 acanthoscurrin-2-like [Cucumis melo var. makuwa] >TYJ97692.1 acanthoscurrin-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-40
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLND+KNFLNYGGVGGFSGIGDGGLPFG
Sbjct: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP
Sbjct: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 117

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BLAST of Cmc04g0097061 vs. NCBI nr
Match: XP_011652144.1 (glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN59369.1 hypothetical protein Csa_000879 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 9.9e-34
Identity = 108/120 (90.00%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 1   MANYKLNLMLV--MAMAALALHVAARTAPN-EAAKGLNDKKNFLNYGGVGGFSGIGDGGL 60
           MANYKLNLMLV  MAMAA A HV ART PN +AAKGLND+KNFLNYGGVGGFSGIGD GL
Sbjct: 1   MANYKLNLMLVMAMAMAAFAFHVTARTVPNDQAAKGLNDQKNFLNYGGVGGFSGIGDSGL 60

Query: 61  PFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           PFGGG GGGGLGGGGGLGGLGGG+GGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP
Sbjct: 61  PFGGGIGGGGLGGGGGLGGLGGGIGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 120

[Close]

BLAST of Cmc04g0097061 vs. NCBI nr
Match: XP_038887967.1 (acanthoscurrin-1-like [Benincasa hispida])

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-30
Identity = 101/119 (84.87%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLPF- 60
           MANYKLNLMLVMAMAA A+HVAARTAPNEA KGLND+KNFLNYGG+GG  GIGD GLPF 
Sbjct: 1   MANYKLNLMLVMAMAAFAVHVAARTAPNEAGKGLNDQKNFLNYGGIGGIGGIGDSGLPFG 60

Query: 61  -GGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
            GGG GGGGLGGGGGLGGLGGG+GG GGVGIGGIGGG+GGGV   IGGIGGGGG VKLP
Sbjct: 61  GGGGIGGGGLGGGGGLGGLGGGIGGVGGVGIGGIGGGIGGGV---IGGIGGGGGFVKLP 116

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BLAST of Cmc04g0097061 vs. NCBI nr
Match: XP_023511522.1 (glycine-rich protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 97.8 bits (242), Expect = 6.5e-17
Identity = 85/119 (71.43%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 1   MANYKLNLMLV--MAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLP 60
           MAN KLNLML+  MAMAA ALHVAARTAP EAAKGLND+KNFL+    GGFSGIGD GLP
Sbjct: 1   MAN-KLNLMLIMAMAMAAFALHVAARTAPIEAAKGLNDQKNFLS----GGFSGIGDSGLP 60

Query: 61  FGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           F      GGLGGGGGLGGLGGG+GGFGGVGIGGIG GVG          G GGG VK+P
Sbjct: 61  F------GGLGGGGGLGGLGGGLGGFGGVGIGGIGAGVG----------GVGGGFVKIP 98

[Close]

BLAST of Cmc04g0097061 vs. NCBI nr
Match: KAG6571569.1 (putative pectate lyase 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16
Identity = 84/119 (70.59%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 1   MANYKLNLMLVMAM--AALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLP 60
           MAN KLNLML+MAM  AA ALHVAARTAP EAAKGLND+KNFL     GGFSGIGD GLP
Sbjct: 469 MAN-KLNLMLIMAMAVAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLP 528

Query: 61  FGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           F      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVG          G GGG VK+P
Sbjct: 529 F------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG----------GVGGGFVKIP 566

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BLAST of Cmc04g0097061 vs. ExPASy TrEMBL
Match: A0A5A7UCJ9 (Acanthoscurrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00690 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLND+KNFLNYGGVGGFSGIGDGGLPFG
Sbjct: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP
Sbjct: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 117

[Close]

BLAST of Cmc04g0097061 vs. ExPASy TrEMBL
Match: A0A1S3BI24 (acanthoscurrin-2-like OS=Cucumis melo OX=3656 GN=LOC103489805 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLPFG 60
           MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLND+KNFLNYGGVGGFSGIGDGGLPFG
Sbjct: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDQKNFLNYGGVGGFSGIGDGGLPFG 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP
Sbjct: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 117

[Close]

BLAST of Cmc04g0097061 vs. ExPASy TrEMBL
Match: A0A0A0LEM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814360 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.8e-34
Identity = 108/120 (90.00%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 1   MANYKLNLMLV--MAMAALALHVAARTAPN-EAAKGLNDKKNFLNYGGVGGFSGIGDGGL 60
           MANYKLNLMLV  MAMAA A HV ART PN +AAKGLND+KNFLNYGGVGGFSGIGD GL
Sbjct: 1   MANYKLNLMLVMAMAMAAFAFHVTARTVPNDQAAKGLNDQKNFLNYGGVGGFSGIGDSGL 60

Query: 61  PFGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           PFGGG GGGGLGGGGGLGGLGGG+GGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP
Sbjct: 61  PFGGGIGGGGLGGGGGLGGLGGGIGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 120

[Close]

BLAST of Cmc04g0097061 vs. ExPASy TrEMBL
Match: A0A6J1HG59 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111463979 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.0e-17
Identity = 84/119 (70.59%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 1   MANYKLNLMLV--MAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLP 60
           MAN KLNLML+  MAMAA ALHVAARTAP EAAKGLND+KNFL     GGFSGIGD GLP
Sbjct: 1   MAN-KLNLMLIMAMAMAAFALHVAARTAPIEAAKGLNDQKNFLG----GGFSGIGDSGLP 60

Query: 61  FGGGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVKLP 118
           F      GGLGGGGGLGG+GGG+GGFGGVGIGGIG GVG          G GGG VK+P
Sbjct: 61  F------GGLGGGGGLGGIGGGLGGFGGVGIGGIGAGVG----------GVGGGFVKIP 98

[Close]

BLAST of Cmc04g0097061 vs. ExPASy TrEMBL
Match: A0A6J1DV95 (acanthoscurrin-1-like OS=Momordica charantia OX=3673 GN=LOC111024760 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.5e-16
Identity = 82/122 (67.21%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 8   LMLVMAMAALALHVAARTAPNE----AAKGLNDKKNFLNYGGVGGFSGIGDGGLPFGG-- 67
           LMLV+AMAA A+  +AR AP +    A +GL D+KN LNYGG+GGFSGIGD GLP GG  
Sbjct: 9   LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIG 68

Query: 68  ---GFGG--GGLGGG-GGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGIGGIGGGGGLVK 118
              G GG  GGLGGG GGLGGLGGG+GG+GG GIGGIG G+GGG +GGIGGIGGGGG V+
Sbjct: 69  GVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVGIGGGALGGIGGIGGGGGFVR 128

[Close]

BLAST of Cmc04g0097061 vs. TAIR 10
Match: AT4G29030.1 (Putative membrane lipoprotein )

HSP 1 Score: 40.8 bits (94), Expect = 8.7e-04
Identity = 60/114 (52.63%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 1   MANYKLNLMLVMAMAALALHVAARTAPNEAAKGLNDKKNFLNYGGVGGFSGIGDGGLPFG 60
           MA +   + LV A+A+ AL   AR  P     GL+D+KN+L YG  GG+SG+GD GLPF 
Sbjct: 1   MAKWFFTIFLVFALAS-ALACGARNVP----VGLSDQKNYLGYG--GGYSGVGDNGLPF- 60

Query: 61  GGFGGGGLGGGGGLGGLGGGVGGFGGVGIGGIGGGVGGGVIGGI-GGIGGGGGL 114
           GG GGG  G GG L     G GGFGG G GG+GGG+GGG   G+ GG+GGG G+
Sbjct: 61  GGVGGGVSGPGGNL-----GYGGFGGAG-GGLGGGLGGGAGSGLGGGLGGGSGI 100

The following BLAST results are available for this feature:

BLAST of Cmc04g0097061 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447334.1	2.4e-40	99.15	PREDICTED: acanthoscurrin-2-like [Cucumis melo] >KAA0053623.1 acanthoscurrin-2-l...	[more]
XP_011652144.1	9.9e-34	90.00	glycine-rich cell wall structural protein 1 [Cucumis sativus] >KGN59369.1 hypoth...	[more]
XP_038887967.1	1.0e-30	84.87	acanthoscurrin-1-like [Benincasa hispida]	[more]
XP_023511522.1	6.5e-17	71.43	glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571569.1	1.4e-16	70.59	putative pectate lyase 15, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cmc04g0097061 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0097061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UCJ9	1.2e-40	99.15	Acanthoscurrin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A1S3BI24	1.2e-40	99.15	acanthoscurrin-2-like OS=Cucumis melo OX=3656 GN=LOC103489805 PE=4 SV=1	[more]
A0A0A0LEM4	4.8e-34	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814360 PE=4 SV=1	[more]
A0A6J1HG59	7.0e-17	70.59	glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111463979 PE=4 S...	[more]
A0A6J1DV95	4.5e-16	67.21	acanthoscurrin-1-like OS=Momordica charantia OX=3673 GN=LOC111024760 PE=4 SV=1	[more]

BLAST of Cmc04g0097061 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29030.1	8.7e-04	52.63	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..112
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0097061.1	Cmc04g0097061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane