Cmc04g0096401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0096401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	CTD small phosphatase-like protein
Location	CMiso1.1chr04: 10630122 .. 10631479 (-)
RNA-Seq Expression	Cmc04g0096401
Synteny	Cmc04g0096401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTATTATTATTATTATTTATACTTCCCTTTTTCTTCCTCCTTATTAATTCAACCCTCTCTCTCTCTCTCTCATCCTTCATTCATTCTTCATATGGCCAATGAAAACTCCACCGATAATAATTCCCTTAACTACCACGGCGACGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACTCAAACAACTCTAACTCTCATAATCAATCACTCACTTCCTTCTCTTCCTCCCACTTTTCTCTTGATGTCAACGACGCTGCCTCCTCCATTGCCCATCATAAACTACCTCATGACCATAATGACCAAGTTGCTGTACAACCCGAGTTCAGTTACAAGGATGATGATCATATCAACGTTTTCAAGAAGAGGAAGATGATTAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGGTCTTTCTCTCTCTCTCTCTCTCTCTTTAATTTCTTTATTCTATTTTAGTTGTTAATTACAATATGAATATAGAAACTTAAGTTTACTAAACTCAGATTCCTCATTTGTTAATCAACTGATGATTGTAAAATGAAGTGTTTCAATTGTTATGTTCAACCTACAAAAATCAAACATTATATTGATTCTTAATTATTATATTAAAAAACATAATAAAAGCGACTTTAACCGTTTTAAAATCTCTGATATGTACCGTAAATAGGATAAGATTTCCTGTTTTATTGATCCTATGATATTATTTCTTTTTCTCAAATTAATTTTAAATTCATCAAAACTCTCGAGTTTCCTTAAGTTTTTGAGTTCAATAGCGTAGTTTAACGATGTCGGGTTTTGGCTGATATATGGGTTTTCTTTGGTCTTGAAAATATGCAGGTCTCTTGTTCAACCTACTTTAGCAAGAACCAGGACAAAGACAATTTAATAGTTCCTGAGGTAAATATATATAGTGGTTTTTGTTTGTTTGTTTTAAATTTTCATTTAATTTACTCAAGGAAAACAGAATGGATATAAGTTTTGGAAACACATATAATGCAAGTGTTTTTTCTTTTCTTTTTTTTGTTGTGCAGGTGGAAGAGAGAAAAGAAATGGGTAATCTTATTGAAATTGGCAACAAGTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTGCCCCAATAAATCTCCTCTCTTTTCTCTCTCTTGTTTATGTAAATATTGATCATTTGATGAAGGTTGTGTATTTTATGTATAAAATGTGTTGTTGTAATATGAATGTAATCAAATGAAGGCATTAGAGGAGAGAAAAGCATATGTATAAATTAATAATAATCTT

mRNA sequence

TTATTATTATTATTATTATTTATACTTCCCTTTTTCTTCCTCCTTATTAATTCAACCCTCTCTCTCTCTCTCTCATCCTTCATTCATTCTTCATATGGCCAATGAAAACTCCACCGATAATAATTCCCTTAACTACCACGGCGACGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACTCAAACAACTCTAACTCTCATAATCAATCACTCACTTCCTTCTCTTCCTCCCACTTTTCTCTTGATGTCAACGACGCTGCCTCCTCCATTGCCCATCATAAACTACCTCATGACCATAATGACCAAGTTGCTGTACAACCCGAGTTCAGTTACAAGGATGATGATCATATCAACGTTTTCAAGAAGAGGAAGATGATTAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGGTCTCTTGTTCAACCTACTTTAGCAAGAACCAGGACAAAGACAATTTAATAGTTCCTGAGGTGGAAGAGAGAAAAGAAATGGGTAATCTTATTGAAATTGGCAACAAGTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTGCCCCAATAAATCTCCTCTCTTTTCTCTCTCTTGTTTATGTAAATATTGATCATTTGATGAAGGTTGTGTATTTTATGTATAAAATGTGTTGTTGTAATATGAATGTAATCAAATGAAGGCATTAGAGGAGAGAAAAGCATATGTATAAATTAATAATAATCTT

Coding sequence (CDS)

ATGGCCAATGAAAACTCCACCGATAATAATTCCCTTAACTACCACGGCGACGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACTCAAACAACTCTAACTCTCATAATCAATCACTCACTTCCTTCTCTTCCTCCCACTTTTCTCTTGATGTCAACGACGCTGCCTCCTCCATTGCCCATCATAAACTACCTCATGACCATAATGACCAAGTTGCTGTACAACCCGAGTTCAGTTACAAGGATGATGATCATATCAACGTTTTCAAGAAGAGGAAGATGATTAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGGTCTCTTGTTCAACCTACTTTAGCAAGAACCAGGACAAAGACAATTTAATAGTTCCTGAGGTGGAAGAGAGAAAAGAAATGGGTAATCTTATTGAAATTGGCAACAAGTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTGCCCCAATAA

Protein sequence

MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDAASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNSPKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYLPQ

Homology

[Close]

BLAST of Cmc04g0096401 vs. NCBI nr
Match: XP_008454531.1 (PREDICTED: uncharacterized protein LOC103494923 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIAHHKLPHDHNDQVAVQPEF YKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180
           PKVSCSTYFSKNQDKDNLIVPEVEERKEMG+LIEIGNKYTELKKRGLCLVPLSMVLNYLP
Sbjct: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180

Query: 181 Q 182
           Q
Sbjct: 181 Q 181

[Close]

BLAST of Cmc04g0096401 vs. NCBI nr
Match: TYK29959.1 (uncharacterized protein E5676_scaffold588G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89
Identity = 174/181 (96.13%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIAHHKLPHDHNDQVAVQPEF YKDDDHINVFKKRKMIKELFVKDEALEDTASSP   
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSP--- 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180
             VSCSTYFSKNQDKDNLIVPEVEERKEMG+LIEIGNKYTELKKRGLCLVPLSMVLNYLP
Sbjct: 121 --VSCSTYFSKNQDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNYLP 176

Query: 181 Q 182
           Q
Sbjct: 181 Q 176

[Close]

BLAST of Cmc04g0096401 vs. NCBI nr
Match: KAA0053082.1 (uncharacterized protein E6C27_scaffold778G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80
Identity = 160/167 (95.81%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIAHHKLPHDHNDQVAVQPEF YKDDDHINVFKKRKMIKELFVKDEALEDTASSP   
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSP--- 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGL 168
             VSCSTYFSKNQDKDNLIVPEVEERKEMG+LIEIGNKYTELKKRGL
Sbjct: 121 --VSCSTYFSKNQDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGL 162

[Close]

BLAST of Cmc04g0096401 vs. NCBI nr
Match: XP_031739077.1 (vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical protein Csa_010736 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 5.4e-79
Identity = 159/183 (86.89%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60

Query: 61  AASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP F YKDDDHIN FKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKVSCSTYFSKNQ-DKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNY 180
           SPK+S STYFSKNQ  +DNLI PEVEER+EM NLI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180

Query: 181 LPQ 182
           LPQ
Sbjct: 181 LPQ 183

[Close]

BLAST of Cmc04g0096401 vs. NCBI nr
Match: XP_038899309.1 (vascular-related unknown protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-54
Identity = 130/186 (69.89%), Postives = 148/186 (79.57%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLD---- 60
           MA ENST N+SL + GD SPE+SGWTIYFEDFLN+N+S+  +Q  TSFSSSHFS D    
Sbjct: 1   MAKENST-NDSLYHGGDPSPEESGWTIYFEDFLNTNHSS--HQPPTSFSSSHFSFDQSYS 60

Query: 61  VNDAASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASS 120
           V DAASS+  HKLP D ND+ A+ P F YK  DHIN FKKRKMIKELFV+DEALEDTASS
Sbjct: 61  VADAASSVPDHKLPVD-NDEAALDPGFGYK--DHINFFKKRKMIKELFVEDEALEDTASS 120

Query: 121 PVNSPKVSCSTYFSKNQ-DKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMV 180
           PVNSPKV  STYFSKNQ  K+NL  PEV+ER+EMGN + +GN Y ELKKRGLCLVPLSMV
Sbjct: 121 PVNSPKVCDSTYFSKNQKHKENLRTPEVDERREMGNFVGMGNDYRELKKRGLCLVPLSMV 180

Query: 181 LNYLPQ 182
           +NY  +
Sbjct: 181 VNYFAE 180

[Close]

BLAST of Cmc04g0096401 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 17  DESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDAASSIAHHKLPHDHNDQ 76
           D++PE+S WT+YFEDF  +++S      +  FSSS     V+DAAS +A  K        
Sbjct: 22  DQNPEESSWTMYFEDFFEASSS---IVDVGDFSSS----SVSDAASFVATKK-------- 81

Query: 77  VAVQPEFSYKDDDHINVFKKRKMIKEL-FVKDEALEDTASSPVNSPKVSCSTYFSKNQDK 136
                  +    +  N+  KR   +E+ F +   LEDTASSP  SP V        N  +
Sbjct: 82  -----TLNVSKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNTR 141

Query: 137 DNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYL 180
               +   ++ K +  +   G    +LKK+GLCLVPLSMV N+L
Sbjct: 142 HGGGIVG-DDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of Cmc04g0096401 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 60/203 (29.56%), Postives = 86/203 (42.36%), Query Frame = 0


Query: 8   DNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA-ASSIAH 67
           D +  + HG +  E+SGWT Y +DF N   +  H ++     SS+  L  + +  S  A 
Sbjct: 23  DAHDHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAAT 82

Query: 68  HKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIK---ELFVKDEALEDTASSPVNSPKV 127
           H               FS K    +N   K K  +   +   +D++LEDTASSPVNSPKV
Sbjct: 83  H--------------AFSGKSFP-VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKV 142

Query: 128 SCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIG--------------------------- 179
           S   +F   Q     I   V     MGN+  +G                           
Sbjct: 143 S---HFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNN 202

[Close]

BLAST of Cmc04g0096401 vs. ExPASy Swiss-Prot
Match: Q9C6I7 (Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 54/183 (29.51%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 15  HGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDAASSIAHHKLPH--- 74
           H +E  E+S W +YFED  + +        +T +  +  S+ ++DAAS +   K+ +   
Sbjct: 23  HEEEDHEESSWIVYFEDIDHDDEMVETEGEMTHYYDNDSSM-ISDAASPVHTTKINNVVR 82

Query: 75  DHNDQVAVQPE-----FSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNSPKV--- 134
              + +   P+       +K+++   + K  +       ++E  EDTASSP N  K+   
Sbjct: 83  RKANNINTNPKKRRIIHQHKEEEEEELQKGEE-------EEEDEEDTASSPSNKTKIFSV 142

Query: 135 ----SCSTYFSKNQDKDNLIVPEVEERKEMGNLI-EIGNK--YTELKKRGLCLVPLSMVL 180
               + +T + K    DN+   E+    E G+ I EI N+    ELKKRGLC+VPLSM+ 
Sbjct: 143 LDHANDNTRYGKTM--DNVTSEEIGCITETGSKIKEIMNEEFSAELKKRGLCVVPLSMLS 195

[Close]

BLAST of Cmc04g0096401 vs. ExPASy Swiss-Prot
Match: Q56YT7 (Vascular-related unknown protein 3 OS=Arabidopsis thaliana OX=3702 GN=VUP3 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.7e-04
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 111 EDTASSPVNSPKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLV 170
           EDTASSP N  +   S       ++  +   ++EE+    N I+I     ELKKRGLCLV
Sbjct: 62  EDTASSPSNRTE-GYSGMEDNTIEEKTMNNGKIEEKILNKNGIKIEEYCAELKKRGLCLV 121

Query: 171 PLSMVLNYL 180
           PLSM+ NY+
Sbjct: 122 PLSMLSNYI 129

[Close]

BLAST of Cmc04g0096401 vs. ExPASy TrEMBL
Match: A0A1S3BZL3 (uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.9e-94
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIAHHKLPHDHNDQVAVQPEF YKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180
           PKVSCSTYFSKNQDKDNLIVPEVEERKEMG+LIEIGNKYTELKKRGLCLVPLSMVLNYLP
Sbjct: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180

Query: 181 Q 182
           Q
Sbjct: 181 Q 181

[Close]

BLAST of Cmc04g0096401 vs. ExPASy TrEMBL
Match: A0A5D3E2F7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00240 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.8e-89
Identity = 174/181 (96.13%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIAHHKLPHDHNDQVAVQPEF YKDDDHINVFKKRKMIKELFVKDEALEDTASSP   
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSP--- 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180
             VSCSTYFSKNQDKDNLIVPEVEERKEMG+LIEIGNKYTELKKRGLCLVPLSMVLNYLP
Sbjct: 121 --VSCSTYFSKNQDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNYLP 176

Query: 181 Q 182
           Q
Sbjct: 181 Q 176

[Close]

BLAST of Cmc04g0096401 vs. ExPASy TrEMBL
Match: A0A5A7UBG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold778G00060 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 160/167 (95.81%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIAHHKLPHDHNDQVAVQPEF YKDDDHINVFKKRKMIKELFVKDEALEDTASSP   
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSP--- 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGL 168
             VSCSTYFSKNQDKDNLIVPEVEERKEMG+LIEIGNKYTELKKRGL
Sbjct: 121 --VSCSTYFSKNQDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGL 162

[Close]

BLAST of Cmc04g0096401 vs. ExPASy TrEMBL
Match: A0A6J1FLD8 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 6.1e-44
Identity = 113/181 (62.43%), Postives = 137/181 (75.69%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60
           MA ENST +NS+ + GD+SPE+SGWTIYF+DFLN+N+   +  S +S  S   S  V DA
Sbjct: 1   MAKENST-SNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADA 60

Query: 61  ASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120
           ASSIA HKLP D N + A+ P  S K  DHIN+FK+RKMIKEL V+DEALEDTASSPVNS
Sbjct: 61  ASSIADHKLPGDDN-RAAMDPNLSCK--DHINLFKRRKMIKELLVEDEALEDTASSPVNS 120

Query: 121 PKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYLP 180
           PKVS +T+FSKN   +   + +V ER+EMG L+ IGN+Y ELKKRGLCLVPL MV+NYL 
Sbjct: 121 PKVSDATFFSKNSGHNENQI-KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLA 175

Query: 181 Q 182
           Q
Sbjct: 181 Q 175

[Close]

BLAST of Cmc04g0096401 vs. ExPASy TrEMBL
Match: A0A6J1FG95 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43
Identity = 115/186 (61.83%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLD---- 60
           MA E+S  + S+ + GD+S E+SGWTIYFEDFL  NN +  NQ  TSFSS   S D    
Sbjct: 1   MAKESSA-HTSVCHGGDQSSEESGWTIYFEDFL--NNHHPTNQPPTSFSSFPLSPDQSYP 60

Query: 61  VNDAASSIAHHKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIKELFVKDEALEDTASS 120
           + DAASS+  HKL  +H D  A+ P FS K  DHIN FKKRKMI E+FV DEALEDTASS
Sbjct: 61  IADAASSVVDHKLLENH-DGAAMDPGFSCK--DHINFFKKRKMIYEVFVDDEALEDTASS 120

Query: 121 PVNSPKVSCSTYFSKN-QDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMV 180
           PVNSPKV  S YFSKN + K  LI P+V ER+E+G+LI IG++YTELKKRGLCLVP SM+
Sbjct: 121 PVNSPKVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMI 180

Query: 181 LNYLPQ 182
           LNY+ Q
Sbjct: 181 LNYMDQ 180

[Close]

BLAST of Cmc04g0096401 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 8.8e-11
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 17  DESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDAASSIAHHKLPHDHNDQ 76
           D++PE+S WT+YFEDF  +++S      +  FSSS     V+DAAS +A  K        
Sbjct: 22  DQNPEESSWTMYFEDFFEASSS---IVDVGDFSSS----SVSDAASFVATKK-------- 81

Query: 77  VAVQPEFSYKDDDHINVFKKRKMIKEL-FVKDEALEDTASSPVNSPKVSCSTYFSKNQDK 136
                  +    +  N+  KR   +E+ F +   LEDTASSP  SP V        N  +
Sbjct: 82  -----TLNVSKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNTR 141

Query: 137 DNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLVPLSMVLNYL 180
               +   ++ K +  +   G    +LKK+GLCLVPLSMV N+L
Sbjct: 142 HGGGIVG-DDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of Cmc04g0096401 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 60/203 (29.56%), Postives = 86/203 (42.36%), Query Frame = 0


Query: 8   DNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA-ASSIAH 67
           D +  + HG +  E+SGWT Y +DF N   +  H ++     SS+  L  + +  S  A 
Sbjct: 23  DAHDHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAAT 82

Query: 68  HKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIK---ELFVKDEALEDTASSPVNSPKV 127
           H               FS K    +N   K K  +   +   +D++LEDTASSPVNSPKV
Sbjct: 83  H--------------AFSGKSFP-VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKV 142

Query: 128 SCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIG--------------------------- 179
           S   +F   Q     I   V     MGN+  +G                           
Sbjct: 143 S---HFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNN 202

[Close]

BLAST of Cmc04g0096401 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 54/183 (29.51%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 15  HGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDAASSIAHHKLPH--- 74
           H +E  E+S W +YFED  + +        +T +  +  S+ ++DAAS +   K+ +   
Sbjct: 23  HEEEDHEESSWIVYFEDIDHDDEMVETEGEMTHYYDNDSSM-ISDAASPVHTTKINNVVR 82

Query: 75  DHNDQVAVQPE-----FSYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNSPKV--- 134
              + +   P+       +K+++   + K  +       ++E  EDTASSP N  K+   
Sbjct: 83  RKANNINTNPKKRRIIHQHKEEEEEELQKGEE-------EEEDEEDTASSPSNKTKIFSV 142

Query: 135 ----SCSTYFSKNQDKDNLIVPEVEERKEMGNLI-EIGNK--YTELKKRGLCLVPLSMVL 180
               + +T + K    DN+   E+    E G+ I EI N+    ELKKRGLC+VPLSM+ 
Sbjct: 143 LDHANDNTRYGKTM--DNVTSEEIGCITETGSKIKEIMNEEFSAELKKRGLCVVPLSMLS 195

[Close]

BLAST of Cmc04g0096401 vs. TAIR 10
Match: AT3G20557.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 5.5e-05
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 111 EDTASSPVNSPKVSCSTYFSKNQDKDNLIVPEVEERKEMGNLIEIGNKYTELKKRGLCLV 170
           EDTASSP N  +   S       ++  +   ++EE+    N I+I     ELKKRGLCLV
Sbjct: 62  EDTASSPSNRTE-GYSGMEDNTIEEKTMNNGKIEEKILNKNGIKIEEYCAELKKRGLCLV 121

Query: 171 PLSMVLNYL 180
           PLSM+ NY+
Sbjct: 122 PLSMLSNYI 129

[Close]

BLAST of Cmc04g0096401 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 7.9e-04
Identity = 41/121 (33.88%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 8   DNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA-ASSIAH 67
           D +  + HG +  E+SGWT Y +DF N   +  H ++     SS+  L  + +  S  A 
Sbjct: 23  DAHDHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAAT 82

Query: 68  HKLPHDHNDQVAVQPEFSYKDDDHINVFKKRKMIK---ELFVKDEALEDTASSPVNSPKV 125
           H               FS K    +N   K K  +   +   +D++LEDTASSPVNSPKV
Sbjct: 83  H--------------AFSGKSFP-VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKV 128

The following BLAST results are available for this feature:

BLAST of Cmc04g0096401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454531.1	1.0e-93	98.90	PREDICTED: uncharacterized protein LOC103494923 [Cucumis melo]	[more]
TYK29959.1	5.7e-89	96.13	uncharacterized protein E5676_scaffold588G00240 [Cucumis melo var. makuwa]	[more]
KAA0053082.1	2.2e-80	95.81	uncharacterized protein E6C27_scaffold778G00060 [Cucumis melo var. makuwa]	[more]
XP_031739077.1	5.4e-79	86.89	vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical pr...	[more]
XP_038899309.1	2.1e-54	69.89	vascular-related unknown protein 4-like isoform X1 [Benincasa hispida]	[more]

BLAST of Cmc04g0096401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5BPG5	1.2e-09	34.76	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]
Q9LSZ3	1.7e-06	29.56	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]
Q9C6I7	2.4e-05	29.51	Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 ...	[more]
Q56YT7	7.7e-04	43.48	Vascular-related unknown protein 3 OS=Arabidopsis thaliana OX=3702 GN=VUP3 PE=2 ...	[more]

BLAST of Cmc04g0096401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZL3	4.9e-94	98.90	uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=...	[more]
A0A5D3E2F7	2.8e-89	96.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UBG9	1.1e-80	95.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1FLD8	6.1e-44	62.43	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1	[more]
A0A6J1FG95	1.8e-43	61.83	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1	[more]

BLAST of Cmc04g0096401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54790.1	8.8e-11	34.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.2	1.2e-07	29.56	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT1G50930.1	1.7e-06	29.51	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G20557.1	5.5e-05	43.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.1	7.9e-04	33.88	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 5..179
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 5..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0096401.1	Cmc04g0096401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development