Cmc04g0096231 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0096231
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Trafficking protein particle complex subunit
Location	CMiso1.1chr04: 10379156 .. 10383015 (-)
RNA-Seq Expression	Cmc04g0096231
Synteny	Cmc04g0096231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGCATTTTGGGCGGAGGCCATCAGTTTTTCATTTCTTTTTTCTTTTCTCTTTTTTTCATTTCCCGAATTTTGGAATCCACAAAGGACGAAAATGGTATTTTGAGGAGTTTGTTTCTCTGCTCCAAAGCCTTTCTGCACCGTGACCGCCCTTATCGTCGGCATCGGCTACACTCTTCGCTTTCCGAATCAATTCTCCGGTATTTAAGTCTCCGGACTACACTTCACTATGTAATATTCCTTCATTAGGGTGTCAAATCTTTTCATTTGCTGTAAAGATAGTAATGAAATTCCCCATTTTGATCTCCATCTATGAACGCTTCGCAAGGCTAACTTTACTCTTGAGCTACGTTGGCGATTAGCGGATTTGGGTCATTCAGCCCACAATCTACACAAGACTAACTCTATCCTTCACTTATGTAGGGCCAATAAGTACAGCGTTTTCGAAAACTTTTCTTTGTGCTCAGCTCACAATTCAGATCCATCATGCCGACCGCTGGTCCTCGATCTGGTGATGCAATCTTCGCTAGTGTTGAGCGAGTGGTAAGCTTCTCAACTACTAGTCTCTCTTTTATTTTTTTATTTTTGTTTCTGCTGTTTAGTTTCTGAGGAATTTTAAGGAAATGCGAGGCAAGAGGGAGGAAATTTTATCAGATGTATTCGAAAGTACATTTTTTTTTTAGGTTTTTTATTTCATTTCTGTTATTGGGTCATCTTCTATTGATAAGAAGCTAAAGTTGAATTGATGTAGAATGCGGAGCTGTTTACCTTGACTTATGGAGCGACTGTCCGTCAATTGCTTACGGATCTAGAGGAGGTTGAGGAGGTTAACAAGCAGCTCGATCAGATGTAATTTTACTTCACATCTCGTGCTTTTTTATCTGATTCTTTTTCATAGCTTAAAATTCTGCTTTGTCCAGAGATGAATTGTGTCTTTTTGTCTGAAGTAGTTATTTGGTTTTGTCTACGCTTTGTTATTTCTTTGGTTGTTTGTTGACTCTTATCTTTGTGTGATATCATAGGAAGGCTAAGGCAATTAGAGGACGTGTATAACAAAATTGTTATACCTCTGTGGTGTACAATGTTTTGTACATTATCGAAATTTCTTTACATTCCTTACATAATAGTTTTGCAGAAGCATTGTTATGAAATGTGCTTTAACTTTAGCGCTGGAGATTTTAAAATTAGATGCATGAGAACCACTATGGATTGACCTAATTGTGTTGAGGCATGTGAGAAAAATGAAGGAACGTGGGGAGATTAGGTTCAAACTTCATAATGGCCACCTACCTAAGACAAAATCCTACAAGTCTTTTGATAACAAAATGTTGTAGAGCCAAAACCACTGTCCAGGTATGATGGAAATTATATTCTTCTATTTGGTTCTTTCATCTTCTGCACAAAAGTTGGTTTTTCATAAAAAAAGAAATAGTGTGCATGACAGGTAAATAGTAGGCATATTATGCTTTTCACTACGTCGTATGCTCATTGATAAAATACTAAAATCTCTTTTGTGCTTAAACTTAATGCCCTTGTGATAAAAGCTCTTATGTGGAGCTTGTGGGTGCAAAGGAGTAGGAGAATTTTCAAAGATAAGTTTTATTTCCTTGATTTACTTTTGTGCTGATTTCAGTTAAATACTTCTTCGTGGTGTTATAACTATTGTAAATTCTTTTGTAATGTTCCTATTTCCTTGATTCTTGTGGATTGCAATCTATTTGTAACTTGTAAGTAGTTCCTTGAGGAGGGCTTTCCCACCACCCAATCCTTAGGATGTTGGGTTTTGCCTTTTTGAATGAATACTACCCCCCCCCCCCCCCCAAATAAAAGAAAACCTACGATATTGAAGTCAGGCTGATCGATGAGTTTCAGTGATCTGACTAATTGTTTTTCAGGGGTTATAATATTGGAATCAGGCTGATTGATGAATTTCTAGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTAGATTGTAGTTTAATACACATCCCAAAGTATTTTATTCTTCCTGAAAACCTTCTTGAGGCTGTTGAAGTACCCTGTCATCTCCCATTCACAACACGATTGTCACGTATTCATATTAGTATGTAAACCCTGTTCGTTTCAGGAAGCCTCTAATCTAGTCTTGTTAGGTTGAATCCTATCCTCCAAGCCTTTGGGTTTCCTTGTCCAGATGGACACTGCCATTTTCGGCAGTTGGCACTATCTGAAATTTTGACCTGCAATTGAGGGGTAGCTTCCGAGTACAGTCAGTGTATAAATTCTGATGCAATAGGCTTTTTGCAGTTAGCTAGAGTGGTTCTATTCATGTCTATTTGAACTTTTTATACCATTATGAGACGGGAGTTCTCTTATTTGCGGGATTTTGATAATATTGTTAGACGCTTGGTGCATTTTACCTATGACTATGAGTGTGGTCCTTTGTAATAACAGATAAAAATAGAAGTTATGTTGGGGGATTGTGTGAAGGGCATGGTAGATTTGTTAGATAATAGTGGTGCCCCTGAGTAGGCATTTGGGATTATCTGGTATTTTGGCTTACAATATACTCTGGTAAATGAAAGTTGAGGCCTTTTGAAGTGTGGAGATCTTAAATTATTTTCCATTTTTTATTAGGTTGGTTTAAAGATGTTTTTGGGAGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCATTAGTAGACTTCGTTGAGCTTCCTGATACTTGCCAAGGTCTCCATTACTGCAACATTTTAAGTGGAGTAATTAGAGGAGCACTTGAGATGGTGAGTTATTTGAATATCCTTTTTTTTTTCTATAATTTTGCTTGTCAGACATTGCCGATAATTATCTTCTTTAATTTCTATAATTTTGCTTAATCTTCAAAATTGTAATTAGAGTTACACGACACAGACCAAAGCTTGTTAACATCTGTAATTTTTGTACATTACATGCTTAAAAAATGAGTTTCATGTATTTTTCTCTGAAAATTTATTCAAGTATATTCGATACATTTCTAATCTTGGACCTATAGTGACTTTATAAAATTAGGGTCTAACACGTATATTATCCTAAACAAGCATTCAATGTGTCCAGCTGTCGAACATGCTACCGAAACTAAAGTGTGTTTGTGTTTCTTCATCATCATGGCTATTCTAGATTTTATTCCTTTTCAGAGATATATTCAATATATTCAATACACAATTGAAATCTTAGAGATTTATTGATATATAATATAAAATTTGAAAGTTCAAGAATGACAAAAATTAAAAGTTCATAGCTTATTCGACACGTTTTAAAATTCAAACCCAATAGATATAAACCTAAAAGTATGGGGACTTAACGACCTTTTAACCACACTTTCCCTTGATATTATAAATTCGTAGGTATGAATTTAGTTTATTTTTCTGATTGTGGTATGGTGCTTGAATCAGGTGTCAATGAAAACAGAAGTAACATGGCTACGGGACATGCTGAGAGGAGACGACAGCTTTGAATTGCAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAATACCCTTATAAAGACGATGAATGAAATCACCCACCAAAGTCACTCTTAGTTTCACGTCATTTCCTCCTGTTCTTTCTTTCTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTGTTCTGTTCATTTGCTCCAGAAAGAGATAGTGACGTTTCTAATTCCTTCAACCATCTAACATCGTAATCAAAGTTATATTATATATAACATGTTTTCTATTGTGATGGGTTAAAATGAATTTATATGGTAAAATAATTTACAGTCAATAAGTCAATGGCCGGGCTGCATAGAT

mRNA sequence

TTGGCATTTTGGGCGGAGGCCATCAGTTTTTCATTTCTTTTTTCTTTTCTCTTTTTTTCATTTCCCGAATTTTGGAATCCACAAAGGACGAAAATGGTATTTTGAGGAGTTTGTTTCTCTGCTCCAAAGCCTTTCTGCACCGTGACCGCCCTTATCGTCGGCATCGGCTACACTCTTCGCTTTCCGAATCAATTCTCCGGGCCAATAAGTACAGCGTTTTCGAAAACTTTTCTTTGTGCTCAGCTCACAATTCAGATCCATCATGCCGACCGCTGGTCCTCGATCTGGTGATGCAATCTTCGCTAGTGTTGAGCGAGTGAATGCGGAGCTGTTTACCTTGACTTATGGAGCGACTGTCCGTCAATTGCTTACGGATCTAGAGGAGGTTGAGGAGGTTAACAAGCAGCTCGATCAGATGGGTTATAATATTGGAATCAGGCTGATTGATGAATTTCTAGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTTGGTTTAAAGATGTTTTTGGGAGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCATTAGTAGACTTCGTTGAGCTTCCTGATACTTGCCAAGGTCTCCATTACTGCAACATTTTAAGTGGAGTAATTAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGCTACGGGACATGCTGAGAGGAGACGACAGCTTTGAATTGCAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAATACCCTTATAAAGACGATGAATGAAATCACCCACCAAAGTCACTCTTAGTTTCACGTCATTTCCTCCTGTTCTTTCTTTCTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTGTTCTGTTCATTTGCTCCAGAAAGAGATAGTGACGTTTCTAATTCCTTCAACCATCTAACATCGTAATCAAAGTTATATTATATATAACATGTTTTCTATTGTGATGGGTTAAAATGAATTTATATGGTAAAATAATTTACAGTCAATAAGTCAATGGCCGGGCTGCATAGAT

Coding sequence (CDS)

ATGCCGACCGCTGGTCCTCGATCTGGTGATGCAATCTTCGCTAGTGTTGAGCGAGTGAATGCGGAGCTGTTTACCTTGACTTATGGAGCGACTGTCCGTCAATTGCTTACGGATCTAGAGGAGGTTGAGGAGGTTAACAAGCAGCTCGATCAGATGGGTTATAATATTGGAATCAGGCTGATTGATGAATTTCTAGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAAGAGACAGCTGATGTGATTGCAAAGGTTGGTTTAAAGATGTTTTTGGGAGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCATTAGTAGACTTCGTTGAGCTTCCTGATACTTGCCAAGGTCTCCATTACTGCAACATTTTAAGTGGAGTAATTAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGCTACGGGACATGCTGAGAGGAGACGACAGCTTTGAATTGCAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAATACCCTTATAAAGACGATGAATGA

Protein sequence

MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

Homology

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BLAST of Cmc04g0096231 vs. NCBI nr
Match: XP_008454543.1 (PREDICTED: trafficking protein particle complex subunit 3 [Cucumis melo] >XP_011651467.1 trafficking protein particle complex subunit 3 [Cucumis sativus] >KAA0046487.1 trafficking protein particle complex subunit 3 [Cucumis melo var. makuwa] >KGN57989.1 hypothetical protein Csa_009665 [Cucumis sativus] >TYJ97725.1 trafficking protein particle complex subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. NCBI nr
Match: KAG6592023.1 (Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375.9 bits (964), Expect = 2.0e-100
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 77  MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 136

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAK+GLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 137 IDEFLAKSNISRCVDFKETADVIAKIGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 196

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQ+PEEY
Sbjct: 197 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQIPEEY 256

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 257 PYKDDE 262

[Close]

BLAST of Cmc04g0096231 vs. NCBI nr
Match: XP_022935837.1 (trafficking protein particle complex subunit 3-like [Cucurbita moschata] >XP_023535136.1 trafficking protein particle complex subunit 3-like [Cucurbita pepo subsp. pepo] >KAG7024898.1 Trafficking protein particle complex subunit 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.9 bits (964), Expect = 2.0e-100
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAK+GLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKIGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. NCBI nr
Match: XP_038896395.1 (trafficking protein particle complex subunit 3 [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 5.7e-100
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. NCBI nr
Match: XP_022976584.1 (trafficking protein particle complex subunit 3-like [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 9.7e-100
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAK+GLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKIGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMK EVTWLRDMLRGDDSFELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKIEVTWLRDMLRGDDSFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. ExPASy Swiss-Prot
Match: Q5ZI57 (Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPPC3 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 92/165 (55.76%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++N+ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMNSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAK+  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  +V +++D L+GD   E+++K ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLP 176

[Close]

BLAST of Cmc04g0096231 vs. ExPASy Swiss-Prot
Match: Q86K94 (Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=trappc3 PE=3 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-50
Identity = 101/174 (58.05%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 9   GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKS 68
           G+ +F  VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS
Sbjct: 9   GNDVFNKVEKINSELFTLTYGALVTQLIKDYEDIEQVNIKLEQMGYNIGIRLIEEFLAKS 68

Query: 69  NISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQ 128
            I RC DF ETA+VIAKVG KMFLGVNA V +WDA      + +EDNPL+DFVELPD  +
Sbjct: 69  GIGRCSDFIETAEVIAKVGFKMFLGVNAHVGDWDANRKEFHLTIEDNPLIDFVELPDQYK 128

Query: 129 -GLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYP 182
             L+Y NIL GV+RGALEMV MK + T+++  L  D + E++V L + + +  P
Sbjct: 129 HKLYYSNILCGVMRGALEMVQMKVKCTFVKCTLSDDSTSEIKVVLEEVLSDMIP 182

[Close]

BLAST of Cmc04g0096231 vs. ExPASy Swiss-Prot
Match: O55013 (Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trappc3 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.6e-50
Identity = 91/165 (55.15%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  E  +++D L+GD   E++++ ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Cmc04g0096231 vs. ExPASy Swiss-Prot
Match: Q5U1Z2 (Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.6e-50
Identity = 91/165 (55.15%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  E  +++D L+GD   E++++ ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Cmc04g0096231 vs. ExPASy Swiss-Prot
Match: O43617 (Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC3 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 90/165 (54.55%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 17  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDF 76
           +++++ELFTLTYGA V QL  D E  E+VNKQLD+MG+NIG+RLI++FLA+SN+ RC DF
Sbjct: 12  KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDF 71

Query: 77  KETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNIL 136
           +ETADVIAKV  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L
Sbjct: 72  RETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLL 131

Query: 137 SGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYP 182
            GV+RGALEMV M  E  +++D L+GD   E++++ ++++ +  P
Sbjct: 132 CGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176

[Close]

BLAST of Cmc04g0096231 vs. ExPASy TrEMBL
Match: A0A5A7TX50 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00240 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.6e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. ExPASy TrEMBL
Match: A0A0A0LAM3 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3G419290 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.6e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. ExPASy TrEMBL
Match: A0A1S3BYU9 (Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC103494932 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.6e-101
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. ExPASy TrEMBL
Match: A0A6J1F6Q0 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111442625 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 9.5e-101
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAK+GLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKIGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. ExPASy TrEMBL
Match: A0A6J1INY4 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111476937 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.7e-100
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKSNISRCVDFKETADVIAK+GLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF
Sbjct: 61  IDEFLAKSNISRCVDFKETADVIAKIGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGLHYCNILSGVIRGALEMVSMK EVTWLRDMLRGDDSFELQVKLLKQ+PEEY
Sbjct: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKIEVTWLRDMLRGDDSFELQVKLLKQIPEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. TAIR 10
Match: AT5G54750.1 (Transport protein particle (TRAPP) component )

HSP 1 Score: 337.8 bits (865), Expect = 5.5e-93
Identity = 161/186 (86.56%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60
           M   GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 61  IDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDF 120
           IDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+VT+WD++GTCCSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTCCSIILEDNPLVDF 120

Query: 121 VELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEY 180
           VELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+LRGDD++ELQVKLLKQV EEY
Sbjct: 121 VELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYELQVKLLKQVAEEY 180

Query: 181 PYKDDE 187
           PYKDDE
Sbjct: 181 PYKDDE 186

[Close]

BLAST of Cmc04g0096231 vs. TAIR 10
Match: AT5G54750.2 (Transport protein particle (TRAPP) component )

HSP 1 Score: 328.6 bits (841), Expect = 3.3e-90
Identity = 161/199 (80.90%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MPTAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------- 60
           M   GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQM        
Sbjct: 1   MAPVGPRSGDAIFSSIDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMYSSSTIYV 60

Query: 61  -----GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKVGLKMFLGVNATVTNWDAEGTC 120
                GYNIGIRLIDEFLAKS +SRCVDFKETA++IAKVG KMFLGV A+VT+WD++GTC
Sbjct: 61  DSLPWGYNIGIRLIDEFLAKSGVSRCVDFKETAEMIAKVGFKMFLGVTASVTSWDSDGTC 120

Query: 121 CSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFE 180
           CSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEMVSMKTEVTW RD+LRGDD++E
Sbjct: 121 CSIILEDNPLVDFVELPDTCQGLYYCNVLSGVIRGALEMVSMKTEVTWTRDVLRGDDAYE 180

Query: 181 LQVKLLKQVPEEYPYKDDE 187
           LQVKLLKQV EEYPYKDDE
Sbjct: 181 LQVKLLKQVAEEYPYKDDE 199

The following BLAST results are available for this feature:

BLAST of Cmc04g0096231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454543.1	1.1e-100	100.00	PREDICTED: trafficking protein particle complex subunit 3 [Cucumis melo] >XP_011...	[more]
KAG6592023.1	2.0e-100	98.92	Trafficking protein particle complex subunit 3, partial [Cucurbita argyrosperma ...	[more]
XP_022935837.1	2.0e-100	98.92	trafficking protein particle complex subunit 3-like [Cucurbita moschata] >XP_023...	[more]
XP_038896395.1	5.7e-100	99.46	trafficking protein particle complex subunit 3 [Benincasa hispida]	[more]
XP_022976584.1	9.7e-100	98.39	trafficking protein particle complex subunit 3-like [Cucurbita maxima]	[more]

BLAST of Cmc04g0096231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZI57	1.1e-50	55.76	Trafficking protein particle complex subunit 3 OS=Gallus gallus OX=9031 GN=TRAPP...	[more]
Q86K94	7.3e-50	58.05	Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum OX=44...	[more]
O55013	9.6e-50	55.15	Trafficking protein particle complex subunit 3 OS=Mus musculus OX=10090 GN=Trapp...	[more]
Q5U1Z2	9.6e-50	55.15	Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=...	[more]
O43617	2.8e-49	54.55	Trafficking protein particle complex subunit 3 OS=Homo sapiens OX=9606 GN=TRAPPC...	[more]

BLAST of Cmc04g0096231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TX50	5.6e-101	100.00	Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0LAM3	5.6e-101	100.00	Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]
A0A1S3BYU9	5.6e-101	100.00	Trafficking protein particle complex subunit OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1F6Q0	9.5e-101	98.92	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1INY4	4.7e-100	98.39	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Cmc04g0096231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54750.1	5.5e-93	86.56	Transport protein particle (TRAPP) component	[more]
AT5G54750.2	3.3e-90	80.90	Transport protein particle (TRAPP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	GENE3D	3.30.1380.20	Trafficking protein particle complex subunit 3	coord: 3..185 e-value: 3.0E-90 score: 302.6
None	No IPR available	PANTHER	PTHR13048:SF5	PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED	coord: 2..186
IPR016721	Bet3 family	PIRSF	PIRSF018293	TRAPP_1_Bet3	coord: 3..185 e-value: 1.3E-79 score: 263.6
IPR016721	Bet3 family	PANTHER	PTHR13048	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3	coord: 2..186
IPR016721	Bet3 family	CDD	cd14942	TRAPPC3_bet3	coord: 20..174 e-value: 4.90785E-103 score: 291.336
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 24..171 e-value: 4.9E-36 score: 123.7
IPR024096	NO signalling/Golgi transport ligand-binding domain superfamily	SUPERFAMILY	111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 18..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0096231.1	Cmc04g0096231.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0033106	cis-Golgi network membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0030008	TRAPP complex