Cmc04g0095521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0095521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 9131553 .. 9132356 (-)
RNA-Seq Expression	Cmc04g0095521
Synteny	Cmc04g0095521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGACTGAAGATGCAACAAAAGATGAACAAATCCTTGAAGCCATTAAAGAATTGTTCAAGAAGTATCCTAAAATCAGTAAAGAACCTACAGACCTTCCTCCTTTGCATGATATACAACACAATATTGAATTACTTCCAGGTGCCTCTCTTCCTCACTTATCTCACTATCGCATGAGCCCAAATGAATATAAAATTTTACATGATACTATTGAAGAATTACTAAAAAAGGGGCACATTAAGCAAAGCTTTAGCCCTTGTGCAGTACCAGCACTACTAACACCTAAAAAAGATGGAACTTGGAGGATATGTGTGGATAGTAGAGCTATCAATAAAATCACAGTAAAATATAGATTTTCAATCCTCAGGGTCAGTGATTTGTTAGATCAATTCGGAGGTGCTTGTATCTTTTCGAAGTTTGATCTAAGGAGTGGCTATCATCAAATACGTATCAGACTTGGAGATAAATGGAAAACAACCTTCAAGACCAATGAAGGACTTTTTGAGTGGCTTGTAATGCCATTTGGCGTTTCTAATGCTCCTAGTACTTTCATGAGGTTGATGAACAAGGTACTGCATCCTTTCTTAAACAAGTTCATTATAGTTTACTTTGATGACATTCTTGTCTTTAGCAAAACCTATGATCAACACCTCCAACACATTGACCAGCTGTTCCAAGTACTTAATCATAATGAACTTTATGTAAATCTCAAGAAGTGCATTTTCTGCTCTAATGAAATAGCCTTCTTGGGGTTCATAATCAGAAAAGATCATGTTCTAATGGATGAGAATAAGGTATAA

mRNA sequence

ATGTCGGGGACTGAAGATGCAACAAAAGATGAACAAATCCTTGAAGCCATTAAAGAATTGTTCAAGAAGTATCCTAAAATCAGTAAAGAACCTACAGACCTTCCTCCTTTGCATGATATACAACACAATATTGAATTACTTCCAGGTGCCTCTCTTCCTCACTTATCTCACTATCGCATGAGCCCAAATGAATATAAAATTTTACATGATACTATTGAAGAATTACTAAAAAAGGGGCACATTAAGCAAAGCTTTAGCCCTTGTGCAGTACCAGCACTACTAACACCTAAAAAAGATGGAACTTGGAGGATATGTGTGGATAGTAGAGCTATCAATAAAATCACAGTAAAATATAGATTTTCAATCCTCAGGGTCAGTGATTTGTTAGATCAATTCGGAGGTGCTTGTATCTTTTCGAAGTTTGATCTAAGGAGTGGCTATCATCAAATACGTATCAGACTTGGAGATAAATGGAAAACAACCTTCAAGACCAATGAAGGACTTTTTGAGTGGCTTGTAATGCCATTTGGCGTTTCTAATGCTCCTAGTACTTTCATGAGGTTGATGAACAAGGTACTGCATCCTTTCTTAAACAAGTTCATTATAGTTTACTTTGATGACATTCTTGTCTTTAGCAAAACCTATGATCAACACCTCCAACACATTGACCAGCTGTTCCAAGTACTTAATCATAATGAACTTTATGTAAATCTCAAGAAGTGCATTTTCTGCTCTAATGAAATAGCCTTCTTGGGGTTCATAATCAGAAAAGATCATGTTCTAATGGATGAGAATAAGGTATAA

Coding sequence (CDS)

ATGTCGGGGACTGAAGATGCAACAAAAGATGAACAAATCCTTGAAGCCATTAAAGAATTGTTCAAGAAGTATCCTAAAATCAGTAAAGAACCTACAGACCTTCCTCCTTTGCATGATATACAACACAATATTGAATTACTTCCAGGTGCCTCTCTTCCTCACTTATCTCACTATCGCATGAGCCCAAATGAATATAAAATTTTACATGATACTATTGAAGAATTACTAAAAAAGGGGCACATTAAGCAAAGCTTTAGCCCTTGTGCAGTACCAGCACTACTAACACCTAAAAAAGATGGAACTTGGAGGATATGTGTGGATAGTAGAGCTATCAATAAAATCACAGTAAAATATAGATTTTCAATCCTCAGGGTCAGTGATTTGTTAGATCAATTCGGAGGTGCTTGTATCTTTTCGAAGTTTGATCTAAGGAGTGGCTATCATCAAATACGTATCAGACTTGGAGATAAATGGAAAACAACCTTCAAGACCAATGAAGGACTTTTTGAGTGGCTTGTAATGCCATTTGGCGTTTCTAATGCTCCTAGTACTTTCATGAGGTTGATGAACAAGGTACTGCATCCTTTCTTAAACAAGTTCATTATAGTTTACTTTGATGACATTCTTGTCTTTAGCAAAACCTATGATCAACACCTCCAACACATTGACCAGCTGTTCCAAGTACTTAATCATAATGAACTTTATGTAAATCTCAAGAAGTGCATTTTCTGCTCTAATGAAATAGCCTTCTTGGGGTTCATAATCAGAAAAGATCATGTTCTAATGGATGAGAATAAGGTATAA

Protein sequence

MSGTEDATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRMSPNEYKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFLGFIIRKDHVLMDENKV

Homology

[Close]

BLAST of Cmc04g0095521 vs. NCBI nr
Match: KAA0054966.1 (transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK22755.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 241/267 (90.26%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 1   MSGTEDATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRM 60
           MSGTED T+DEQI EAIKELFKKYPKISKEPT LPPL DI HNIELL GAS PHL HY M
Sbjct: 623 MSGTEDTTRDEQIPEAIKELFKKYPKISKEPTCLPPLRDIHHNIELLSGASFPHLPHYHM 682

Query: 61  SPNEYKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRF 120
           SPNEYKILHD IEELLKKGHIK SFS C VPALLTPKKDGTWR+CVDSRAINKITVKYRF
Sbjct: 683 SPNEYKILHDAIEELLKKGHIKPSFSLCVVPALLTPKKDGTWRMCVDSRAINKITVKYRF 742

Query: 121 SILRVSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSN 180
            I RVSDLLDQ GGACIFSK DLRS YHQIRIR GD+WKT FKTNEGLFEWLVMPF +SN
Sbjct: 743 PIPRVSDLLDQLGGACIFSKIDLRSDYHQIRIRPGDEWKTAFKTNEGLFEWLVMPFDLSN 802

Query: 181 APSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKK 240
           APSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKK
Sbjct: 803 APSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKK 862

Query: 241 CIFCSNEIAFLGFIIRKDHVLMDENKV 268
           CIFCSNEIAFLGFIIRKDHVLMDE KV
Sbjct: 863 CIFCSNEIAFLGFIIRKDHVLMDEKKV 889

[Close]

BLAST of Cmc04g0095521 vs. NCBI nr
Match: PWA81295.1 (transposon Ty3-I Gag-Pol polyprotein [Artemisia annua])

HSP 1 Score: 355.9 bits (912), Expect = 3.0e-94
Identity = 168/269 (62.45%), Postives = 214/269 (79.55%), Query Frame = 0


Query: 1   MSGTEDATKDEQILEAIKELFKKYPKISKE--PTDLPPLHDIQHNIELLPGASLPHLSHY 60
           + G ED   D  I E IK + +++ K+  +  P  LPPL +IQH I+L+PGASLP+L HY
Sbjct: 612 VKGVEDG-MDNVIPEVIKPVLEEFSKVVADDTPDSLPPLRNIQHQIDLVPGASLPNLPHY 671

Query: 61  RMSPNEYKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKY 120
           RMSP E  IL + +EELL+KGHI++S SPCAVPALLTPKKDG+WR+CVDSRAINKITV+Y
Sbjct: 672 RMSPKESDILREKVEELLRKGHIQESISPCAVPALLTPKKDGSWRMCVDSRAINKITVRY 731

Query: 121 RFSILRVSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGV 180
           RF I R+ DLLDQ  GA +FSK DLRSGYHQIRI+ GD+WKT FKT +GL+EWLVMPFG+
Sbjct: 732 RFPIPRLDDLLDQLSGAKLFSKIDLRSGYHQIRIKPGDEWKTAFKTKDGLYEWLVMPFGL 791

Query: 181 SNAPSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNL 240
           SNAPSTFMRLM +VL PF+ KF++VYFDDILV+S+T  +HL H+ ++ + L  NEL+VNL
Sbjct: 792 SNAPSTFMRLMTQVLRPFMGKFVVVYFDDILVYSQTEKEHLDHLRKVLKALTENELFVNL 851

Query: 241 KKCIFCSNEIAFLGFIIRKDHVLMDENKV 268
           KKC F +N++ FLG+I+  D + +DE+KV
Sbjct: 852 KKCTFLTNKLLFLGYIVSSDGIHVDEDKV 879

[Close]

BLAST of Cmc04g0095521 vs. NCBI nr
Match: XP_040245606.1 (uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245607.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245608.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245609.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245610.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245611.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245612.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245613.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245614.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245615.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245616.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245617.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245618.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245619.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245620.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245621.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245622.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245623.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245624.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245625.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245626.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245627.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245628.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245629.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245630.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245631.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245632.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245633.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245634.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245635.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245636.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245637.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245638.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata] >XP_040245639.1 uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strangulata])

HSP 1 Score: 352.8 bits (904), Expect = 2.5e-93
Identity = 161/256 (62.89%), Postives = 204/256 (79.69%), Query Frame = 0


Query: 12  QILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRMSPNEYKILHDT 71
           +I   ++ L  ++  I  EP  LPP+  IQH I+L+PGASLP+L HYRMSP E+ IL + 
Sbjct: 579 EIPTKVRGLLAEFQNILGEPHGLPPMRGIQHRIDLIPGASLPNLPHYRMSPKEHDILKEK 638

Query: 72  IEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQ 131
           +EELL+KGHI++S SPCAVPALL PKKDG+WR+C DSRA+NKITV+YRF I R+ D+LDQ
Sbjct: 639 VEELLQKGHIRESISPCAVPALLAPKKDGSWRMCTDSRAVNKITVRYRFPIPRLDDMLDQ 698

Query: 132 FGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNK 191
             GA +F+K DLRSGYHQIRIR GD+WKT FKT EGLFEWLVMPFG+SNAPSTFM LMN+
Sbjct: 699 LSGARVFTKLDLRSGYHQIRIRPGDEWKTAFKTKEGLFEWLVMPFGLSNAPSTFMHLMNQ 758

Query: 192 VLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFL 251
           VL PFL+ F++VYFDDIL++SK  D+H  HI ++ +VL  NELYVNLKKC+F   ++ FL
Sbjct: 759 VLRPFLSHFVVVYFDDILIYSKDEDEHFDHIRKVLEVLRENELYVNLKKCVFLQTQLLFL 818

Query: 252 GFIIRKDHVLMDENKV 268
           GF+I  D + +D++KV
Sbjct: 819 GFVITCDGIRVDDSKV 834

[Close]

BLAST of Cmc04g0095521 vs. NCBI nr
Match: CAA7040802.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 350.9 bits (899), Expect = 9.7e-93
Identity = 159/263 (60.46%), Postives = 210/263 (79.85%), Query Frame = 0


Query: 5   EDATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRMSPNE 64
           E+AT  E++LE +++   K     + P DLPP+ DIQH+I+L+PG+SLP+L HYRMSP E
Sbjct: 32  EEATTPEEVLEILEDF--KELTADELPNDLPPMRDIQHHIDLIPGSSLPNLPHYRMSPKE 91

Query: 65  YKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILR 124
            +IL + IE+LLKKG I++  SPCAVP LL PKK   W++CVDSRAINKIT+KYRF I R
Sbjct: 92  NEILREQIEDLLKKGFIREIMSPCAVPVLLVPKKGNQWQMCVDSRAINKITIKYRFPIPR 151

Query: 125 VSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPST 184
           + D+LD+  G+ +FSK DLRSGYHQIRIR GD+WKT FK+ +GL+EWLVMPFG+SNAPST
Sbjct: 152 LEDMLDELAGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLYEWLVMPFGLSNAPST 211

Query: 185 FMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFC 244
           FMRLMN++L PF   F++VYFDDIL++SKT ++HL H+ Q+ QVL  N+LYVNLKKC FC
Sbjct: 212 FMRLMNQILRPFAGSFVVVYFDDILIYSKTKEEHLDHLKQVLQVLQENQLYVNLKKCTFC 271

Query: 245 SNEIAFLGFIIRKDHVLMDENKV 268
           +N++ FLGF++ ++ + +DE KV
Sbjct: 272 TNKLVFLGFVVGEEGIQVDEEKV 292

[Close]

BLAST of Cmc04g0095521 vs. NCBI nr
Match: XP_020877199.1 (uncharacterized protein LOC110227443 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-92
Identity = 161/270 (59.63%), Postives = 215/270 (79.63%), Query Frame = 0


Query: 1   MSGTEDATKDE-QILEAIKELFKKYPKISKE--PTDLPPLHDIQHNIELLPGASLPHLSH 60
           + G   A K+E  I E + E+ +++ ++  +  P DLPP+ DIQH I+L+PG+SLP+L H
Sbjct: 590 IKGLMSAVKEEVAIPEDVLEILEEFKELIADELPNDLPPMRDIQHQIDLIPGSSLPNLPH 649

Query: 61  YRMSPNEYKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVK 120
           YRMSP E +IL + IE+LLKKG I++S SPCAVP LL PKK   WR+CVDSRAINKIT+K
Sbjct: 650 YRMSPKENEILREQIEDLLKKGFIRESMSPCAVPVLLVPKKGNQWRMCVDSRAINKITIK 709

Query: 121 YRFSILRVSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFG 180
           YRF I R+ D+LD+  G+ +FSK DLRSGYHQIRIR GD+WKT FK+ +GL+EWLVMPFG
Sbjct: 710 YRFPIPRLEDMLDELTGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLYEWLVMPFG 769

Query: 181 VSNAPSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVN 240
           +SNAPSTFMRLMN+VL PF   F++VYFDDIL++SKT ++HL+H+ Q+ QVL  N+L+VN
Sbjct: 770 LSNAPSTFMRLMNQVLRPFTGSFVVVYFDDILIYSKTKEEHLEHVKQVLQVLQENQLFVN 829

Query: 241 LKKCIFCSNEIAFLGFIIRKDHVLMDENKV 268
           LKKC+F +N++ FLGF++ +D + +DE+KV
Sbjct: 830 LKKCVFSTNKLLFLGFVVGEDGIQVDEDKV 859

[Close]

BLAST of Cmc04g0095521 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 193.4 bits (490), Expect = 3.4e-48
Identity = 102/242 (42.15%), Postives = 147/242 (60.74%), Query Frame = 0


Query: 20  LFKKYPKISKEPTDLPPLH------DIQHNIELLPGASLPHLSHYRMSPNEYKILHDTIE 79
           L +KY +I +   DLPP         ++H+IE+ PGA LP L  Y ++    + ++  ++
Sbjct: 560 LQQKYREIIR--NDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 619

Query: 80  ELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQFG 139
           +LL    I  S SPC+ P +L PKKDGT+R+CVD R +NK T+   F + R+ +LL + G
Sbjct: 620 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 679

Query: 140 GACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNKVL 199
            A IF+  DL SGYHQI +   D++KT F T  G +E+ VMPFG+ NAPSTF R M    
Sbjct: 680 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 739

Query: 200 HPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFLGF 256
                +F+ VY DDIL+FS++ ++H +H+D + + L +  L V  KKC F S E  FLG+
Sbjct: 740 RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 797

[Close]

BLAST of Cmc04g0095521 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 3.4e-48
Identity = 102/242 (42.15%), Postives = 147/242 (60.74%), Query Frame = 0


Query: 20  LFKKYPKISKEPTDLPPLH------DIQHNIELLPGASLPHLSHYRMSPNEYKILHDTIE 79
           L +KY +I +   DLPP         ++H+IE+ PGA LP L  Y ++    + ++  ++
Sbjct: 586 LQQKYREIIR--NDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 645

Query: 80  ELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQFG 139
           +LL    I  S SPC+ P +L PKKDGT+R+CVD R +NK T+   F + R+ +LL + G
Sbjct: 646 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 705

Query: 140 GACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNKVL 199
            A IF+  DL SGYHQI +   D++KT F T  G +E+ VMPFG+ NAPSTF R M    
Sbjct: 706 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 765

Query: 200 HPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFLGF 256
                +F+ VY DDIL+FS++ ++H +H+D + + L +  L V  KKC F S E  FLG+
Sbjct: 766 RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 823

[Close]

BLAST of Cmc04g0095521 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 80/242 (33.06%), Postives = 140/242 (57.85%), Query Frame = 0


Query: 17  IKELFKKYPKISKEPT--DLP-PLHDIQHNIELLPGASLPHLSHYRMSPNEYKILHDTIE 76
           + +++K++  I+ E     LP P+  ++  +EL        + +Y + P + + ++D I 
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEIN 433

Query: 77  ELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQFG 136
           + LK G I++S +  A P +  PKK+GT R+ VD + +NK      + +  +  LL +  
Sbjct: 434 QGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQ 493

Query: 137 GACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNKVL 196
           G+ IF+K DL+S YH IR+R GD+ K  F+   G+FE+LVMP+G+S AP+ F   +N +L
Sbjct: 494 GSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTIL 553

Query: 197 HPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFLGF 256
                  ++ Y DDIL+ SK+  +H++H+  + Q L +  L +N  KC F  +++ F+G+
Sbjct: 554 GEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGY 613

[Close]

BLAST of Cmc04g0095521 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 80/242 (33.06%), Postives = 140/242 (57.85%), Query Frame = 0


Query: 17  IKELFKKYPKISKEPT--DLP-PLHDIQHNIELLPGASLPHLSHYRMSPNEYKILHDTIE 76
           + +++K++  I+ E     LP P+  ++  +EL        + +Y + P + + ++D I 
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEIN 433

Query: 77  ELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQFG 136
           + LK G I++S +  A P +  PKK+GT R+ VD + +NK      + +  +  LL +  
Sbjct: 434 QGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQ 493

Query: 137 GACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNKVL 196
           G+ IF+K DL+S YH IR+R GD+ K  F+   G+FE+LVMP+G+S AP+ F   +N +L
Sbjct: 494 GSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTIL 553

Query: 197 HPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFLGF 256
                  ++ Y DDIL+ SK+  +H++H+  + Q L +  L +N  KC F  +++ F+G+
Sbjct: 554 GEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGY 613

[Close]

BLAST of Cmc04g0095521 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 80/242 (33.06%), Postives = 140/242 (57.85%), Query Frame = 0


Query: 17  IKELFKKYPKISKEPT--DLP-PLHDIQHNIELLPGASLPHLSHYRMSPNEYKILHDTIE 76
           + +++K++  I+ E     LP P+  ++  +EL        + +Y + P + + ++D I 
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEIN 433

Query: 77  ELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRVSDLLDQFG 136
           + LK G I++S +  A P +  PKK+GT R+ VD + +NK      + +  +  LL +  
Sbjct: 434 QGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQ 493

Query: 137 GACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTFMRLMNKVL 196
           G+ IF+K DL+S YH IR+R GD+ K  F+   G+FE+LVMP+G+S AP+ F   +N +L
Sbjct: 494 GSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTIL 553

Query: 197 HPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCSNEIAFLGF 256
                  ++ Y DDIL+ SK+  +H++H+  + Q L +  L +N  KC F  +++ F+G+
Sbjct: 554 GEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGY 613

[Close]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL
Match: A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.8e-136
Identity = 241/267 (90.26%), Postives = 245/267 (91.76%), Query Frame = 0


Query: 1   MSGTEDATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRM 60
           MSGTED T+DEQI EAIKELFKKYPKISKEPT LPPL DI HNIELL GAS PHL HY M
Sbjct: 623 MSGTEDTTRDEQIPEAIKELFKKYPKISKEPTCLPPLRDIHHNIELLSGASFPHLPHYHM 682

Query: 61  SPNEYKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRF 120
           SPNEYKILHD IEELLKKGHIK SFS C VPALLTPKKDGTWR+CVDSRAINKITVKYRF
Sbjct: 683 SPNEYKILHDAIEELLKKGHIKPSFSLCVVPALLTPKKDGTWRMCVDSRAINKITVKYRF 742

Query: 121 SILRVSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSN 180
            I RVSDLLDQ GGACIFSK DLRS YHQIRIR GD+WKT FKTNEGLFEWLVMPF +SN
Sbjct: 743 PIPRVSDLLDQLGGACIFSKIDLRSDYHQIRIRPGDEWKTAFKTNEGLFEWLVMPFDLSN 802

Query: 181 APSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKK 240
           APSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKK
Sbjct: 803 APSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKK 862

Query: 241 CIFCSNEIAFLGFIIRKDHVLMDENKV 268
           CIFCSNEIAFLGFIIRKDHVLMDE KV
Sbjct: 863 CIFCSNEIAFLGFIIRKDHVLMDEKKV 889

[Close]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL
Match: A0A2U1P6A2 (Transposon Ty3-I Gag-Pol polyprotein OS=Artemisia annua OX=35608 GN=CTI12_AA189480 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.5e-94
Identity = 168/269 (62.45%), Postives = 214/269 (79.55%), Query Frame = 0


Query: 1   MSGTEDATKDEQILEAIKELFKKYPKISKE--PTDLPPLHDIQHNIELLPGASLPHLSHY 60
           + G ED   D  I E IK + +++ K+  +  P  LPPL +IQH I+L+PGASLP+L HY
Sbjct: 612 VKGVEDG-MDNVIPEVIKPVLEEFSKVVADDTPDSLPPLRNIQHQIDLVPGASLPNLPHY 671

Query: 61  RMSPNEYKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKY 120
           RMSP E  IL + +EELL+KGHI++S SPCAVPALLTPKKDG+WR+CVDSRAINKITV+Y
Sbjct: 672 RMSPKESDILREKVEELLRKGHIQESISPCAVPALLTPKKDGSWRMCVDSRAINKITVRY 731

Query: 121 RFSILRVSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGV 180
           RF I R+ DLLDQ  GA +FSK DLRSGYHQIRI+ GD+WKT FKT +GL+EWLVMPFG+
Sbjct: 732 RFPIPRLDDLLDQLSGAKLFSKIDLRSGYHQIRIKPGDEWKTAFKTKDGLYEWLVMPFGL 791

Query: 181 SNAPSTFMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNL 240
           SNAPSTFMRLM +VL PF+ KF++VYFDDILV+S+T  +HL H+ ++ + L  NEL+VNL
Sbjct: 792 SNAPSTFMRLMTQVLRPFMGKFVVVYFDDILVYSQTEKEHLDHLRKVLKALTENELFVNL 851

Query: 241 KKCIFCSNEIAFLGFIIRKDHVLMDENKV 268
           KKC F +N++ FLG+I+  D + +DE+KV
Sbjct: 852 KKCTFLTNKLLFLGYIVSSDGIHVDEDKV 879

[Close]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL
Match: A0A6D2JW30 (Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS28037 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.7e-93
Identity = 159/263 (60.46%), Postives = 210/263 (79.85%), Query Frame = 0


Query: 5   EDATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRMSPNE 64
           E+AT  E++LE +++   K     + P DLPP+ DIQH+I+L+PG+SLP+L HYRMSP E
Sbjct: 32  EEATTPEEVLEILEDF--KELTADELPNDLPPMRDIQHHIDLIPGSSLPNLPHYRMSPKE 91

Query: 65  YKILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILR 124
            +IL + IE+LLKKG I++  SPCAVP LL PKK   W++CVDSRAINKIT+KYRF I R
Sbjct: 92  NEILREQIEDLLKKGFIREIMSPCAVPVLLVPKKGNQWQMCVDSRAINKITIKYRFPIPR 151

Query: 125 VSDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPST 184
           + D+LD+  G+ +FSK DLRSGYHQIRIR GD+WKT FK+ +GL+EWLVMPFG+SNAPST
Sbjct: 152 LEDMLDELAGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLYEWLVMPFGLSNAPST 211

Query: 185 FMRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFC 244
           FMRLMN++L PF   F++VYFDDIL++SKT ++HL H+ Q+ QVL  N+LYVNLKKC FC
Sbjct: 212 FMRLMNQILRPFAGSFVVVYFDDILIYSKTKEEHLDHLKQVLQVLQENQLYVNLKKCTFC 271

Query: 245 SNEIAFLGFIIRKDHVLMDENKV 268
           +N++ FLGF++ ++ + +DE KV
Sbjct: 272 TNKLVFLGFVVGEEGIQVDEEKV 292

[Close]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL
Match: A0A6D2HLB5 (Reverse transcriptase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS2198 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.0e-92
Identity = 160/262 (61.07%), Postives = 209/262 (79.77%), Query Frame = 0


Query: 6   DATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRMSPNEY 65
           +AT  E++LE +++   K     + P  LPP+ DIQH+I+L+PG+SLP+L HYRMSP E 
Sbjct: 550 EATTPEEVLEILEDF--KELTADELPNYLPPMRDIQHHIDLIPGSSLPNLPHYRMSPKEN 609

Query: 66  KILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRV 125
           +IL + IE+LLKKG I++S SPCAVP LL PKK   WR+CVDSRAINKIT+KYRF I R+
Sbjct: 610 EILREQIEDLLKKGFIRESMSPCAVPVLLVPKKGNQWRMCVDSRAINKITIKYRFPIPRL 669

Query: 126 SDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTF 185
            D+LD+  G+ IFSK DLRSGYHQIRIR GD+WKT FK+ +GL+EWLVMPFG+SNAPSTF
Sbjct: 670 EDMLDELAGSKIFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLYEWLVMPFGLSNAPSTF 729

Query: 186 MRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCS 245
           MRLMN++L PF   F++VYFDDIL++SKT ++HL H+ Q+ QVL  N+LYVNLKKC FC+
Sbjct: 730 MRLMNQILRPFSGSFVVVYFDDILIYSKTKEEHLDHLKQVLQVLQENQLYVNLKKCTFCT 789

Query: 246 NEIAFLGFIIRKDHVLMDENKV 268
           N++ FLGF++ ++ + +DE KV
Sbjct: 790 NKLVFLGFVVGEEGIQVDEEKV 809

[Close]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL
Match: A0A6D2IKM3 (Reverse transcriptase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS15430 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.0e-92
Identity = 160/262 (61.07%), Postives = 209/262 (79.77%), Query Frame = 0


Query: 6   DATKDEQILEAIKELFKKYPKISKEPTDLPPLHDIQHNIELLPGASLPHLSHYRMSPNEY 65
           +AT  E++LE +++   K     + P  LPP+ DIQH+I+L+PG+SLP+L HYRMSP E 
Sbjct: 337 EATTPEEVLEILEDF--KELTADELPNYLPPMRDIQHHIDLIPGSSLPNLPHYRMSPKEN 396

Query: 66  KILHDTIEELLKKGHIKQSFSPCAVPALLTPKKDGTWRICVDSRAINKITVKYRFSILRV 125
           +IL + IE+LLKKG I++S SPCAVP LL PKK   WR+CVDSRAINKIT+KYRF I R+
Sbjct: 397 EILREQIEDLLKKGFIRESMSPCAVPVLLVPKKGNQWRMCVDSRAINKITIKYRFPIPRL 456

Query: 126 SDLLDQFGGACIFSKFDLRSGYHQIRIRLGDKWKTTFKTNEGLFEWLVMPFGVSNAPSTF 185
            D+LD+  G+ IFSK DLRSGYHQIRIR GD+WKT FK+ +GL+EWLVMPFG+SNAPSTF
Sbjct: 457 EDMLDELAGSKIFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLYEWLVMPFGLSNAPSTF 516

Query: 186 MRLMNKVLHPFLNKFIIVYFDDILVFSKTYDQHLQHIDQLFQVLNHNELYVNLKKCIFCS 245
           MRLMN++L PF   F++VYFDDIL++SKT ++HL H+ Q+ QVL  N+LYVNLKKC FC+
Sbjct: 517 MRLMNQILRPFSGSFVVVYFDDILIYSKTKEEHLDHLKQVLQVLQENQLYVNLKKCTFCT 576

Query: 246 NEIAFLGFIIRKDHVLMDENKV 268
           N++ FLGF++ ++ + +DE KV
Sbjct: 577 NKLVFLGFVVGEEGIQVDEEKV 596

The following BLAST results are available for this feature:

BLAST of Cmc04g0095521 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054966.1	1.2e-135	90.26	transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK2...	[more]
PWA81295.1	3.0e-94	62.45	transposon Ty3-I Gag-Pol polyprotein [Artemisia annua]	[more]
XP_040245606.1	2.5e-93	62.89	uncharacterized protein LOC109732219 isoform X1 [Aegilops tauschii subsp. strang...	[more]
CAA7040802.1	9.7e-93	60.46	unnamed protein product [Microthlaspi erraticum]	[more]
XP_020877199.1	1.7e-92	59.63	uncharacterized protein LOC110227443 [Arabidopsis lyrata subsp. lyrata]	[more]

BLAST of Cmc04g0095521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.4e-48	42.15	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.4e-48	42.15	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	1.2e-37	33.06	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-37	33.06	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-37	33.06	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DGR0	5.8e-136	90.26	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A2U1P6A2	1.5e-94	62.45	Transposon Ty3-I Gag-Pol polyprotein OS=Artemisia annua OX=35608 GN=CTI12_AA1894...	[more]
A0A6D2JW30	4.7e-93	60.46	Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=168...	[more]
A0A6D2HLB5	1.0e-92	61.07	Reverse transcriptase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS2198 PE=...	[more]
A0A6D2IKM3	1.0e-92	61.07	Reverse transcriptase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS15430 PE...	[more]

BLAST of Cmc04g0095521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 120..255 e-value: 9.2E-84 score: 282.0
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 40..180 e-value: 9.2E-84 score: 282.0
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 7..206
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 7..206
None	No IPR available	CDD	cd01647	RT_LTR	coord: 79..255 e-value: 5.24903E-84 score: 247.123
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 96..255 e-value: 2.2E-31 score: 109.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 76..255 score: 16.337254
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 21..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0095521.1	Cmc04g0095521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding