Cmc04g0095491 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0095491
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	CMiso1.1chr04: 8965820 .. 8966146 (-)
RNA-Seq Expression	Cmc04g0095491
Synteny	Cmc04g0095491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCATTGTCACTGGACCTGGAATTGGCCCTGGAATTCAAAATATCCGACCTTGATCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCTATTGATGGCATATTTGTTAACCAAGCTAAATATCTCAAAGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTAATACTGCATTCTCTGTAAATCGTGTCAGTTAG

mRNA sequence

ATGACATCATTGTCACTGGACCTGGAATTGGCCCTGGAATTCAAAATATCCGACCTTGATCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCTATTGATGGCATATTTGTTAACCAAGCTAAATATCTCAAAGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTAATACTGCATTCTCTGTAAATCGTGTCAGTTAG

Coding sequence (CDS)

ATGACATCATTGTCACTGGACCTGGAATTGGCCCTGGAATTCAAAATATCCGACCTTGATCCTTTAAAGTACTTTCTTGGTCTCGAAATCCAATCCTCTATTGATGGCATATTTGTTAACCAAGCTAAATATCTCAAAGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTAATACTGCATTCTCTGTAAATCGTGTCAGTTAG

Protein sequence

MTSLSLDLELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS

Homology

[Close]

BLAST of Cmc04g0095491 vs. NCBI nr
Match: TYJ95794.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MTSLSLDLELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSC 60
           MTSLSLDLELALEFKISD DPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSC
Sbjct: 261 MTSLSLDLELALEFKISDFDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSC 320

Query: 61  ITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
           ITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV+
Sbjct: 321 ITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVN 368

[Close]

BLAST of Cmc04g0095491 vs. NCBI nr
Match: XP_016901810.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +LALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYL DLLHTSGMTS KSCITPMSTS 
Sbjct: 140 QLALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSVKSCITPMSTSF 199

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRP+ AFSVNRVS
Sbjct: 200 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVS 239

[Close]

BLAST of Cmc04g0095491 vs. NCBI nr
Match: KAA0025871.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK22593.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.0 bits (476), Expect = 4.4e-44
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +LALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYL DLLHTSGMTS KSCITPMSTS 
Sbjct: 172 QLALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSVKSCITPMSTSF 231

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV 108
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRP+ AFSVNRV
Sbjct: 232 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRV 270

[Close]

BLAST of Cmc04g0095491 vs. NCBI nr
Match: TYJ96936.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +LALEFKIS+L PLKYFLGLEIQSSIDGIFVNQAKYL DLLHTSGMTSAKSCITPMSTSL
Sbjct: 251 QLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSL 310

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV 108
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRP+ AFSVNR+
Sbjct: 311 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRL 349

[Close]

BLAST of Cmc04g0095491 vs. NCBI nr
Match: TYK19790.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 8.3e-43
Identity = 93/100 (93.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +L LEFKISDL PLKYFL LEIQSSIDGIFVNQAKYL DLLHTSGMTSAKSCITPMSTSL
Sbjct: 234 QLDLEFKISDLGPLKYFLDLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSL 293

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPN AFSVN VS
Sbjct: 294 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNIAFSVNLVS 333

[Close]

BLAST of Cmc04g0095491 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-16
Identity = 40/102 (39.22%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 6   LDLELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMS 65
           L  +L+  F + DL P+ YFLG++I++   G+F++Q KY + +L+ +GM   K   TP+ 
Sbjct: 23  LIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLP 82

Query: 66  TSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV 108
             L+       + DPS +R +VG+LQYLT TRP+ +++VN V
Sbjct: 83  LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIV 124

[Close]

BLAST of Cmc04g0095491 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-15
Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 10   LALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTS-- 69
            L+  F + D + L YFLG+E +    G+ ++Q +Y+ DLL  + M +AK   TPM+ S  
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 70   LDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
            L LY+      DP+ YR +VGSLQYL FTRP+ +++VNR+S
Sbjct: 1231 LSLYS-GTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLS 1270

[Close]

BLAST of Cmc04g0095491 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14
Identity = 43/101 (42.57%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 10   LALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTS-- 69
            L+  F + + + L YFLG+E +    G+ ++Q +Y  DLL  + M +AK   TPM+TS  
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 70   LDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
            L L++      DP+ YR +VGSLQYL FTRP+ +++VNR+S
Sbjct: 1214 LTLHS-GTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLS 1253

[Close]

BLAST of Cmc04g0095491 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 27/97 (27.84%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 13   EFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSLDLYT 72
            +F+++DL+ +K+F+G+ I+   D I+++Q+ Y+K +L    M +  +  TP+ + ++   
Sbjct: 1111 KFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYEL 1170

Query: 73   IAPPFNDPSLYRRLVGSLQYLTF-TRPNTAFSVNRVS 109
            +    +  +  R L+G L Y+   TRP+   +VN +S
Sbjct: 1171 LNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1207

[Close]

BLAST of Cmc04g0095491 vs. ExPASy TrEMBL
Match: A0A5D3BA30 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00700 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.2e-51
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MTSLSLDLELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSC 60
           MTSLSLDLELALEFKISD DPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSC
Sbjct: 261 MTSLSLDLELALEFKISDFDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSC 320

Query: 61  ITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
           ITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV+
Sbjct: 321 ITPMSTSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVN 368

[Close]

BLAST of Cmc04g0095491 vs. ExPASy TrEMBL
Match: A0A1S4E1E5 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991416 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.5e-45
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +LALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYL DLLHTSGMTS KSCITPMSTS 
Sbjct: 140 QLALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSVKSCITPMSTSF 199

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRP+ AFSVNRVS
Sbjct: 200 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVS 239

[Close]

BLAST of Cmc04g0095491 vs. ExPASy TrEMBL
Match: A0A5D3DGC2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00100 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-44
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +LALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYL DLLHTSGMTS KSCITPMSTS 
Sbjct: 172 QLALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSVKSCITPMSTSF 231

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV 108
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRP+ AFSVNRV
Sbjct: 232 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRV 270

[Close]

BLAST of Cmc04g0095491 vs. ExPASy TrEMBL
Match: A0A5D3BD76 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00410 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +LALEFKIS+L PLKYFLGLEIQSSIDGIFVNQAKYL DLLHTSGMTSAKSCITPMSTSL
Sbjct: 251 QLALEFKISNLGPLKYFLGLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSL 310

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV 108
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRP+ AFSVNR+
Sbjct: 311 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRL 349

[Close]

BLAST of Cmc04g0095491 vs. ExPASy TrEMBL
Match: A0A5D3D8K1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00150 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.0e-43
Identity = 93/100 (93.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 9   ELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSL 68
           +L LEFKISDL PLKYFL LEIQSSIDGIFVNQAKYL DLLHTSGMTSAKSCITPMSTSL
Sbjct: 234 QLDLEFKISDLGPLKYFLDLEIQSSIDGIFVNQAKYLNDLLHTSGMTSAKSCITPMSTSL 293

Query: 69  DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
           DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPN AFSVN VS
Sbjct: 294 DLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNIAFSVNLVS 333

[Close]

BLAST of Cmc04g0095491 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 4.9e-17
Identity = 40/102 (39.22%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 6   LDLELALEFKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMS 65
           L  +L+  F + DL P+ YFLG++I++   G+F++Q KY + +L+ +GM   K   TP+ 
Sbjct: 23  LIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLP 82

Query: 66  TSLDLYTIAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRV 108
             L+       + DPS +R +VG+LQYLT TRP+ +++VN V
Sbjct: 83  LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIV 124

[Close]

BLAST of Cmc04g0095491 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 78.2 bits (191), Expect = 4.6e-15
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 14  FKISDLDPLKYFLGLEIQSSIDGIFVNQAKYLKDLLHTSGMTSAKSCITPMSTSLDLYT- 73
           FK+ DL PLKYFLGLEI  S  GI + Q KY  DLL  +G+   K    PM  S+     
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367

Query: 74  IAPPFNDPSLYRRLVGSLQYLTFTRPNTAFSVNRVS 109
               F D   YRRL+G L YL  TR + +F+VN++S
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLS 403

The following BLAST results are available for this feature:

BLAST of Cmc04g0095491 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95794.1	1.1e-50	98.15	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_016901810.1	2.0e-44	94.00	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0025871.1	4.4e-44	93.94	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK22593.1 putative m...	[more]
TYJ96936.1	2.8e-43	92.93	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK19790.1	8.3e-43	93.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0095491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92519	6.9e-16	39.22	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	4.4e-15	43.56	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.8e-14	42.57	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.7e-06	27.84	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc04g0095491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BA30	5.2e-51	98.15	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4E1E5	9.5e-45	94.00	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3DGC2	2.1e-44	93.94	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3BD76	1.4e-43	92.93	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3D8K1	4.0e-43	93.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc04g0095491 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	4.9e-17	39.22	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	4.6e-15	45.83	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 7..64 e-value: 2.7E-9 score: 37.0
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 80..108
None	No IPR available	PANTHER	PTHR11439:SF313	SUBFAMILY NOT NAMED	coord: 80..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0095491.1	Cmc04g0095491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane