Cmc04g0095361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0095361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 8645004 .. 8646215 (-)
RNA-Seq Expression	Cmc04g0095361
Synteny	Cmc04g0095361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGACTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACCTACACCAGATTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTTAG

mRNA sequence

ATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGACTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACCTACACCAGATTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTTAG

Coding sequence (CDS)

ATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGACTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCGGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTTCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCTATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAACTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACCTACACCAGATTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAAGAAGGGAACCCCTTTTGTCTGGAGCCCAGCTTGCGAGAGGAGCTTTTAG

Protein sequence

MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF

Homology

[Close]

BLAST of Cmc04g0095361 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 418 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 477

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 478 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 537

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 538 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 597

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 598 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 657

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 658 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 717

Query: 301 QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 718 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 777

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
           SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 778 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 820

[Close]

BLAST of Cmc04g0095361 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 1082 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 1141

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 1142 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 1201

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 1202 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1261

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 1262 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1321

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1322 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1381

Query: 301  QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1382 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1441

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
            SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 1442 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 1484

[Close]

BLAST of Cmc04g0095361 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301 QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
           SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 837 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 879

[Close]

BLAST of Cmc04g0095361 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 828  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 887

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 888  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 947

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 948  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1007

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 1008 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1067

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1068 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1127

Query: 301  QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1128 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1187

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
            SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 1188 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 1230

[Close]

BLAST of Cmc04g0095361 vs. NCBI nr
Match: TYK28368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 816  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 875

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 876  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 935

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 936  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 995

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 996  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1055

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1056 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1115

Query: 301  QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1116 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1175

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
            SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 1176 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 1218

[Close]

BLAST of Cmc04g0095361 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-57
Identity = 113/316 (35.76%), Postives = 187/316 (59.18%), Query Frame = 0


Query: 84  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 143
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 144 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 203
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 204 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 263
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 264 FMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQILETLRANKLYAKFSKCEFW 323
           F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  +L+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 324 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 383
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 384 PLTQLTKKGTPFVWSP 398
           PL  L KK   + W+P
Sbjct: 669 PLNNLLKKDVRWKWTP 680

[Close]

BLAST of Cmc04g0095361 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-57
Identity = 113/316 (35.76%), Postives = 187/316 (59.18%), Query Frame = 0


Query: 84  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 143
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 144 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 203
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 204 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 263
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 264 FMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQILETLRANKLYAKFSKCEFW 323
           F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  +L+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 324 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 383
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 384 PLTQLTKKGTPFVWSP 398
           PL  L KK   + W+P
Sbjct: 669 PLNNLLKKDVRWKWTP 680

[Close]

BLAST of Cmc04g0095361 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-57
Identity = 113/316 (35.76%), Postives = 187/316 (59.18%), Query Frame = 0


Query: 84  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 143
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 144 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 203
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 204 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 263
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 264 FMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQILETLRANKLYAKFSKCEFW 323
           F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  +L+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 324 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 383
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 384 PLTQLTKKGTPFVWSP 398
           PL  L KK   + W+P
Sbjct: 669 PLNNLLKKDVRWKWTP 680

[Close]

BLAST of Cmc04g0095361 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-57
Identity = 113/316 (35.76%), Postives = 187/316 (59.18%), Query Frame = 0


Query: 84  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 143
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 144 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 203
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 204 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 263
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 264 FMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQILETLRANKLYAKFSKCEFW 323
           F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  +L+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 324 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 383
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 384 PLTQLTKKGTPFVWSP 398
           PL  L KK   + W+P
Sbjct: 669 PLNNLLKKDVRWKWTP 680

[Close]

BLAST of Cmc04g0095361 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.5e-57
Identity = 113/316 (35.76%), Postives = 187/316 (59.18%), Query Frame = 0


Query: 84  VREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 143
           V+EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 144 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 203
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 204 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 263
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 264 FMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQILETLRANKLYAKFSKCEFW 323
           F   +N +  E  +S V+ ++DDILI+SK+E+EH +H+  +L+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 324 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 383
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 384 PLTQLTKKGTPFVWSP 398
           PL  L KK   + W+P
Sbjct: 669 PLNNLLKKDVRWKWTP 680

[Close]

BLAST of Cmc04g0095361 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 6.6e-232
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301 QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
           SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 837 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 879

[Close]

BLAST of Cmc04g0095361 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 6.6e-232
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301 QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
           SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 837 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 879

[Close]

BLAST of Cmc04g0095361 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 6.6e-232
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301 QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
           SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 837 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 879

[Close]

BLAST of Cmc04g0095361 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 6.6e-232
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301 QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
           SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 837 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 879

[Close]

BLAST of Cmc04g0095361 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 6.6e-232
Identity = 401/403 (99.50%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 828  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 887

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 888  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 947

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 948  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1007

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 1008 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1067

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1068 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1127

Query: 301  QILETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            Q+LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1128 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1187

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTKKGTPFVWSPACERSF 404
            SFLGLAGYYRRFVEDFSRIASPLTQLT+KGTPFVWSPACERSF
Sbjct: 1188 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSF 1230

[Close]

BLAST of Cmc04g0095361 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 3.2e-21
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 298 HLHQILETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPST 357
           HL  +L+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 358 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTKKGT 392
            +E+R FLGL GYYRRFV+++ +I  PLT+L KK +
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS 98

The following BLAST results are available for this feature:

BLAST of Cmc04g0095361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031437.1	1.4e-231	99.50	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	1.4e-231	99.50	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025848.1	1.4e-231	99.50	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK28422.1	1.4e-231	99.50	pol protein [Cucumis melo var. makuwa]	[more]
TYK28368.1	1.4e-231	99.50	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0095361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	3.5e-57	35.76	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.5e-57	35.76	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.5e-57	35.76	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.5e-57	35.76	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	3.5e-57	35.76	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0095361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CQB5	6.6e-232	99.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	6.6e-232	99.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TEQ2	6.6e-232	99.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	6.6e-232	99.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5D3DY07	6.6e-232	99.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62...	[more]

BLAST of Cmc04g0095361 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.2e-21	45.83	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 342..403 e-value: 1.7E-23 score: 84.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 197..332 e-value: 1.4E-94 score: 317.3
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..49 e-value: 2.5E-8 score: 35.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 172..331 e-value: 3.3E-28 score: 98.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 153..332 score: 10.536036
None	No IPR available	PFAM	PF08284	RVP_2	coord: 4..42 e-value: 8.2E-13 score: 48.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 118..257 e-value: 1.4E-94 score: 317.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 129..403
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 129..403
None	No IPR available	CDD	cd01647	RT_LTR	coord: 156..332 e-value: 1.13708E-99 score: 292.192
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 96..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0095361.1	Cmc04g0095361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding