Homology
BLAST of Cmc04g0095311 vs. NCBI nr
Match:
KAA0033501.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK26828.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 526.9 bits (1356), Expect = 1.7e-145
Identity = 296/435 (68.05%), Postives = 309/435 (71.03%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
MESIKVIPS EQNLNE STSHQVEIHSNLKD NPSSSDQLPTEALPSFHPQEEEEEENAE
Sbjct: 317 MESIKVIPSTEQNLNEASTSHQVEIHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAE 376
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLTNY+LTRDRGRRTIRPPSRFARADCIANSS ETIKDEPYSYEDAL SRH+NQWKEAMN
Sbjct: 377 DLTNYSLTRDRGRRTIRPPSRFARADCIANSSTETIKDEPYSYEDALYSRHNNQWKEAMN 436
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
ELNSLYK DT +LVEKPHGKSIIPCKWVFKKKMIG+LND
Sbjct: 437 AELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELND-------------------- 496
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
KHTSIRILL IVACE LELEQLDVTTAFLHGSLE+EIFMEQPKGFEVKGKK
Sbjct: 497 ---------KHTSIRILLAIVACENLELEQLDVTTAFLHGSLEKEIFMEQPKGFEVKGKK 556
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
EL + Y++ + R
Sbjct: 557 EL-------------------DLLEVYMTHVSTTR------------------------- 616
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 360
+KDLGA KKILGIEILRDRNNNELSLTQKTYTNKVL
Sbjct: 617 ----------------------ISLKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVL 656
Query: 361 CRFNMANSKVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLT 420
CRFNMANSKVV TPLAQH KISARDS KDPTD+QAMSYVPY NAIGSLMYL+VCTRPDL
Sbjct: 677 CRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQAMSYVPYSNAIGSLMYLMVCTRPDLA 656
Query: 421 HSSSLVSRYWETQAR 436
HSSSLVS Y E +
Sbjct: 737 HSSSLVSWYIENPGK 656
BLAST of Cmc04g0095311 vs. NCBI nr
Match:
KAA0051442.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22211.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 522.7 bits (1345), Expect = 3.1e-144
Identity = 297/429 (69.23%), Postives = 310/429 (72.26%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
MESIKVIP AE+NLNEPSTSHQVEIHSNLK+ NPSSSDQLPTEALPSF+ QEEEEEENAE
Sbjct: 564 MESIKVIP-AEKNLNEPSTSHQVEIHSNLKNLNPSSSDQLPTEALPSFYSQEEEEEENAE 623
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLTNY+LTRDRGRRTI+PPSRFARADCI NSSIETI+D+P SYEDA
Sbjct: 624 DLTNYSLTRDRGRRTIKPPSRFARADCIVNSSIETIEDKPDSYEDA-------------- 683
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
LYK KPHGK IIPCKWVFKKKMIGDLNDKVKFK+RL+AKGFKQKEGVD
Sbjct: 684 -----LYK--------KPHGKIIIPCKWVFKKKMIGDLNDKVKFKARLVAKGFKQKEGVD 743
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
YN+IF PVVKHTSIRILL IVACE LELEQLDVTTAFLHGSLEEEIFMEQP G
Sbjct: 744 YNEIFPPVVKHTSIRILLAIVACENLELEQLDVTTAFLHGSLEEEIFMEQPMG------- 803
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
Sbjct: 804 ------------------------------------------------------------ 863
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 360
RD KLKEIKAQL+ EFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL
Sbjct: 864 ------RDLTKLKEIKAQLSAEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 891
Query: 361 CRFNMANSKVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLT 420
CRFNMANSKVVSTPLAQH KISAR S KDPTD+QAMSYVPY NA GSLMYL+VCTRPDL
Sbjct: 924 CRFNMANSKVVSTPLAQHIKISARGSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLA 891
Query: 421 HSSSLVSRY 430
HSSSLVSRY
Sbjct: 984 HSSSLVSRY 891
BLAST of Cmc04g0095311 vs. NCBI nr
Match:
KAA0039651.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ95535.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])
HSP 1 Score: 516.2 bits (1328), Expect = 2.9e-142
Identity = 286/429 (66.67%), Postives = 299/429 (69.70%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
M+SIKVIPSAE NLNEPSTSHQVEIHSNLKDSNPSSSDQLPT+A PSFHPQEEEEEENAE
Sbjct: 289 MDSIKVIPSAEHNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTKAFPSFHPQEEEEEENAE 348
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLTNY+LTRDRGR+TIRPPSRFARADCIANSSIETI+DEPYSY+DALCSRH+NQWKEAMN
Sbjct: 349 DLTNYSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMN 408
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
DELNSLYKNDTWELVE PHGKSIIPCKWVFKKKMIG LNDKVKFK+RL+AKGF+QKE
Sbjct: 409 DELNSLYKNDTWELVETPHGKSIIPCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKE--- 468
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
DVTTAFL GSLEEEI MEQPKGFEVKGK
Sbjct: 469 -------------------------------DVTTAFLRGSLEEEILMEQPKGFEVKGKM 528
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
EL
Sbjct: 529 EL---------------------------------------------------------- 588
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 360
DLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL
Sbjct: 589 --------------------------DLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 599
Query: 361 CRFNMANSKVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLT 420
CRFN+ANSKVVSTPLAQH KISARDS KDPTD+QAMSYVPY NA GSLMYL+VCTRPDL
Sbjct: 649 CRFNLANSKVVSTPLAQHIKISARDSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLA 599
Query: 421 HSSSLVSRY 430
HSSSLVSRY
Sbjct: 709 HSSSLVSRY 599
BLAST of Cmc04g0095311 vs. NCBI nr
Match:
KAA0062923.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYK16420.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])
HSP 1 Score: 471.5 bits (1212), Expect = 8.2e-129
Identity = 258/358 (72.07%), Postives = 269/358 (75.14%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
ME IKVIPS EQNLNE ST+HQVEIHSNLKDSNPS SDQLPTE LPSFHP EEEE+EN E
Sbjct: 1 MEPIKVIPSTEQNLNESSTNHQVEIHSNLKDSNPSISDQLPTETLPSFHPLEEEEKENTE 60
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLT+Y+LT DR RRTIRP SRFARA+CIANSSIETI+DEPYSYEDAL SRHSNQWKEAMN
Sbjct: 61 DLTSYSLTGDRRRRTIRPLSRFARANCIANSSIETIEDEPYSYEDALYSRHSNQWKEAMN 120
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
DELNSLYKNDTWE VEKPHGK IIPCKWVFKKKMIGDLN+KVKFK+RL+AKGFKQK
Sbjct: 121 DELNSLYKNDTWEQVEKPHGKIIIPCKWVFKKKMIGDLNNKVKFKARLVAKGFKQKG--- 180
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
DVTTAFLHGSLEEEIFMEQP
Sbjct: 181 -------------------------------DVTTAFLHGSLEEEIFMEQP--------- 240
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
LIGFIRSLYDPC YYKKLTEGDYIYLLLYVD
Sbjct: 241 ----------------------------CLIGFIRSLYDPCVYYKKLTEGDYIYLLLYVD 287
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNK 359
DML+A RDPIKLKEIKAQL+VEFDMKDLGAAKKIL IEILRDRNNNELSLTQKTYTNK
Sbjct: 301 DMLLAGRDPIKLKEIKAQLSVEFDMKDLGAAKKILRIEILRDRNNNELSLTQKTYTNK 287
BLAST of Cmc04g0095311 vs. NCBI nr
Match:
KAA0047818.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-126
Identity = 248/427 (58.08%), Postives = 316/427 (74.00%), Query Frame = 0
Query: 9 SAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYNLT 68
S + + + S V+I+ KDS DQ + PS + ++ AE+L +Y L
Sbjct: 6 SKQTEVQNHTPSFYVKIYPCHKDS-VIIDDQPQSSGAPS--TSKNRTDKQAENLEDYLLP 65
Query: 69 RDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMNDELNSLYK 128
DR RRT +P R+AR++ I+N S+E +EP +E+AL S ++W A+ +E+NSL+K
Sbjct: 66 IDRERRTTKPLLRYARSEFISNHSLEDDNEEPNIFEEALNSDEKDEWLAAIKNEINSLHK 125
Query: 129 NDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVDYNKIFSPV 188
N+T E +P K IIP KWV+KKK +G+ N+KVKFK RL+AKGFKQKEG DY +IFSPV
Sbjct: 126 NETLEFTGRPLNKGIIPSKWVYKKKFLGEKNEKVKFKVRLVAKGFKQKEGADYTEIFSPV 185
Query: 189 VKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKKELVCKLNR 248
V TSIR+LLTIV CE L+LEQ+DVT AFLHGSLEE+++MEQPKGFE KGK +LVCKL +
Sbjct: 186 VS-TSIRVLLTIVTCEDLKLEQMDVTIAFLHGSLEEDLYMEQPKGFEAKGKIDLVCKLKK 245
Query: 249 SLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVDDMLIAERD 308
SLYGLKQSPRCW K FDD+I+ IGF+RSLYDPC YYKKLT G IYLLLYVDDML+A ++
Sbjct: 246 SLYGLKQSPRCWNKRFDDFINKIGFMRSLYDPCVYYKKLTNGSLIYLLLYVDDMLLAGKN 305
Query: 309 PIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANS 368
KL EIK QL EF+MKDLG+AK+ILG+EI R R+ L L+QK YT KVL +FNMAN+
Sbjct: 306 LTKLNEIKEQLKNEFEMKDLGSAKRILGMEITRQRSIRGLFLSQKQYTKKVLAKFNMANA 365
Query: 369 KVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHSSSLVSR 428
K VSTP+ Q K+SA+DS + T++QAMS VPY NAIGSL++L+VCTR DL ++SSLVSR
Sbjct: 366 KAVSTPVGQQFKLSAKDSPNESTERQAMSNVPYSNAIGSLIHLMVCTRHDLAYNSSLVSR 425
Query: 429 YWETQAR 436
Y + R
Sbjct: 426 YMKNHGR 428
BLAST of Cmc04g0095311 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 345.1 bits (884), Expect = 1.2e-93
Identity = 197/421 (46.79%), Postives = 272/421 (64.61%), Query Frame = 0
Query: 17 PSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYNLTRDRGRRTI 76
PSTS+ + D +Q P E + Q +E E E T RR+
Sbjct: 731 PSTSNNPTSAESTTDEVSEQGEQ-PGEVIEQ-GEQLDEGVEEVEHPTQGEEQHQPLRRSE 790
Query: 77 RPPSRFARADCIANSSIETIKD--EPYSYEDALCSRHSNQWKEAMNDELNSLYKNDTWEL 136
RP R ++ I D EP S ++ L NQ +AM +E+ SL KN T++L
Sbjct: 791 RPRVESRR---YPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKL 850
Query: 137 VEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVDYNKIFSPVVKHTSI 196
VE P GK + CKWVFK K GD V++K+RL+ KGF+QK+G+D+++IFSPVVK TSI
Sbjct: 851 VELPKGKRPLKCKWVFKLKKDGDCK-LVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 910
Query: 197 RILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKKELVCKLNRSLYGLK 256
R +L++ A LE+EQLDV TAFLHG LEEEI+MEQP+GFEV GKK +VCKLN+SLYGLK
Sbjct: 911 RTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLK 970
Query: 257 QSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVDDMLIAERDPIKLKE 316
Q+PR WY FD ++ ++++ DPC Y+K+ +E ++I LLLYVDDMLI +D + +
Sbjct: 971 QAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAK 1030
Query: 317 IKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVSTP 376
+K L+ FDMKDLG A++ILG++I+R+R + +L L+Q+ Y +VL RFNM N+K VSTP
Sbjct: 1031 LKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTP 1090
Query: 377 LAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHSSSLVSRYWETQA 436
LA H K+S + +K M+ VPY +A+GSLMY +VCTRPD+ H+ +VSR+ E
Sbjct: 1091 LAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPG 1145
BLAST of Cmc04g0095311 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 239.2 bits (609), Expect = 9.0e-62
Identity = 146/418 (34.93%), Postives = 228/418 (54.55%), Query Frame = 0
Query: 29 LKDSNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNY---NLTRDRG---------RRTI 88
L +S D E+ S +P E E E AE L N T++ G R
Sbjct: 804 LNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKT 863
Query: 89 RPPSRFARADCIANSSI----ETIKDEPYSYEDALCSRHSNQWKEAMNDELNSLYKNDTW 148
+P + D N + D P S+++ + W+EA+N ELN+ N+TW
Sbjct: 864 KPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTW 923
Query: 149 ELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVDYNKIFSPVVKHT 208
+ ++P K+I+ +WVF K +L + +++K+RL+A+GF QK +DY + F+PV + +
Sbjct: 924 TITKRPENKNIVDSRWVFSVK-YNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARIS 983
Query: 209 SIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKKELVCKLNRSLYG 268
S R +L++V L++ Q+DV TAFL+G+L+EEI+M P+G + + VCKLN+++YG
Sbjct: 984 SFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYG 1043
Query: 269 LKQSPRCWYKCFDDYISLIGFIRSLYDPCFY-YKKLTEGDYIYLLLYVDDMLIAERDPIK 328
LKQ+ RCW++ F+ + F+ S D C Y K + IY+LLYVDD++IA D +
Sbjct: 1044 LKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTR 1103
Query: 329 LKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVV 388
+ K L +F M DL K +GI I + +++ L+Q Y K+L +FNM N V
Sbjct: 1104 MNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAV 1163
Query: 389 STPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHSSSLVSRY 430
STPL +S +D P + IG LMY+++CTRPDLT + +++SRY
Sbjct: 1164 STPLPSKINYELLNSDED-------CNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRY 1209
BLAST of Cmc04g0095311 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.1e-56
Identity = 151/427 (35.36%), Postives = 231/427 (54.10%), Query Frame = 0
Query: 8 PSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYNL 67
P + ++ PSTS + + N SS T LP P + NA+ N +
Sbjct: 860 PISSPHIPTPSTS--------ISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHS 919
Query: 68 TRDRGRRTIRPPS-RFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMNDELNSL 127
R + IR P+ +++ A +A +S EP A+ + ++W++AM E+N+
Sbjct: 920 MATRAKDGIRKPNQKYSYATSLAANS------EP---RTAIQAMKDDRWRQAMGSEINAQ 979
Query: 128 YKNDTWELV-EKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVDYNKIF 187
N TW+LV P +I+ C+W+F KK D ++K+RL+AKG+ Q+ G+DY + F
Sbjct: 980 IGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD-GSLNRYKARLVAKGYNQRPGLDYAETF 1039
Query: 188 SPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKKELVCK 247
SPV+K TSIRI+L + + QLDV AFL G+L +E++M QP GF K + + VC+
Sbjct: 1040 SPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCR 1099
Query: 248 LNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEG-DYIYLLLYVDDMLI 307
L +++YGLKQ+PR WY Y+ +GF+ S+ D + L G IY+L+YVDD+LI
Sbjct: 1100 LRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFV--LQRGRSIIYMLVYVDDILI 1159
Query: 308 AERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFN 367
D + LK L+ F +K+ LGIE R L L+Q+ YT +L R N
Sbjct: 1160 TGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQRRYTLDLLARTN 1219
Query: 368 MANSKVVSTPLAQHNKISARDSSK--DPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHS 427
M +K V+TP+A K++ +K DPT+ Y +GSL YL TRPDL+++
Sbjct: 1220 MLTAKPVATPMATSPKLTLHSGTKLPDPTE--------YRGIVGSLQYL-AFTRPDLSYA 1255
Query: 428 SSLVSRY 430
+ +S+Y
Sbjct: 1280 VNRLSQY 1255
BLAST of Cmc04g0095311 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 211.5 bits (537), Expect = 2.0e-53
Identity = 147/433 (33.95%), Postives = 223/433 (51.50%), Query Frame = 0
Query: 9 SAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHP----QEEEEEENAEDLTN 68
S Q ST Q S ++ SSS PT HP + N L
Sbjct: 867 SPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNT 926
Query: 69 YNLTRDRGRRTIRPPSRFARADCIA-----NSSIETIKDEPYSYEDALCSRHSNQWKEAM 128
+++ I+P +++ A +A ++I+ +KDE +W+ AM
Sbjct: 927 HSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDE--------------RWRNAM 986
Query: 129 NDELNSLYKNDTWELVEKPHGK-SIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEG 188
E+N+ N TW+LV P +I+ C+W+F KK D ++K+RL+AKG+ Q+ G
Sbjct: 987 GSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSD-GSLNRYKARLVAKGYNQRPG 1046
Query: 189 VDYNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKG 248
+DY + FSPV+K TSIRI+L + + QLDV AFL G+L ++++M QP GF K
Sbjct: 1047 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKD 1106
Query: 249 KKELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLY 308
+ VCKL ++LYGLKQ+PR WY +Y+ IGF+ S+ D + + + +Y+L+Y
Sbjct: 1107 RPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGK-SIVYMLVY 1166
Query: 309 VDDMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNK 368
VDD+LI DP L L+ F +KD LGIE R L L+Q+ Y
Sbjct: 1167 VDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRRYILD 1226
Query: 369 VLCRFNMANSKVVSTPLAQHNKISARDSSK--DPTDKQAMSYVPYFNAIGSLMYLIVCTR 428
+L R NM +K V+TP+A K+S +K DPT+ Y +GSL YL TR
Sbjct: 1227 LLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE--------YRGIVGSLQYL-AFTR 1272
Query: 429 PDLTHSSSLVSRY 430
PD++++ + +S++
Sbjct: 1287 PDISYAVNRLSQF 1272
BLAST of Cmc04g0095311 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 117.9 bits (294), Expect = 3.0e-25
Identity = 67/219 (30.59%), Postives = 116/219 (52.97%), Query Frame = 0
Query: 211 LDVTTAFLHGSLEEEIFMEQPKGFEVKGKKELVCKLNRSLYGLKQSPRCWYKCFDDYISL 270
+DV TAFL+ +++E I+++QP GF + + V +L +YGLKQ+P W + ++ +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 271 IGFIRSLYDPCFYYKKLTEGDYIYLLLYVDDMLIAERDPIKLKEIKAQLNVEFDMKDLGA 330
IGF R + Y++ ++G IY+ +YVDD+L+A P +K +L + MKDLG
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGP-IYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120
Query: 331 AKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVSTPLAQHNKISARDSSKDP 390
K LG+ I +N +++L+ + Y K + K+ TPL + +
Sbjct: 121 VDKFLGLNI-HQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLF------ET 180
Query: 391 TDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHSSSLVSRY 430
T PY + +G L++ RPD+++ SL+SR+
Sbjct: 181 TSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRF 211
BLAST of Cmc04g0095311 vs. ExPASy TrEMBL
Match:
A0A5A7SVP7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00170 PE=4 SV=1)
HSP 1 Score: 526.9 bits (1356), Expect = 8.0e-146
Identity = 296/435 (68.05%), Postives = 309/435 (71.03%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
MESIKVIPS EQNLNE STSHQVEIHSNLKD NPSSSDQLPTEALPSFHPQEEEEEENAE
Sbjct: 317 MESIKVIPSTEQNLNEASTSHQVEIHSNLKDLNPSSSDQLPTEALPSFHPQEEEEEENAE 376
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLTNY+LTRDRGRRTIRPPSRFARADCIANSS ETIKDEPYSYEDAL SRH+NQWKEAMN
Sbjct: 377 DLTNYSLTRDRGRRTIRPPSRFARADCIANSSTETIKDEPYSYEDALYSRHNNQWKEAMN 436
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
ELNSLYK DT +LVEKPHGKSIIPCKWVFKKKMIG+LND
Sbjct: 437 AELNSLYKKDTLKLVEKPHGKSIIPCKWVFKKKMIGELND-------------------- 496
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
KHTSIRILL IVACE LELEQLDVTTAFLHGSLE+EIFMEQPKGFEVKGKK
Sbjct: 497 ---------KHTSIRILLAIVACENLELEQLDVTTAFLHGSLEKEIFMEQPKGFEVKGKK 556
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
EL + Y++ + R
Sbjct: 557 EL-------------------DLLEVYMTHVSTTR------------------------- 616
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 360
+KDLGA KKILGIEILRDRNNNELSLTQKTYTNKVL
Sbjct: 617 ----------------------ISLKDLGATKKILGIEILRDRNNNELSLTQKTYTNKVL 656
Query: 361 CRFNMANSKVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLT 420
CRFNMANSKVV TPLAQH KISARDS KDPTD+QAMSYVPY NAIGSLMYL+VCTRPDL
Sbjct: 677 CRFNMANSKVVFTPLAQHIKISARDSPKDPTDRQAMSYVPYSNAIGSLMYLMVCTRPDLA 656
Query: 421 HSSSLVSRYWETQAR 436
HSSSLVS Y E +
Sbjct: 737 HSSSLVSWYIENPGK 656
BLAST of Cmc04g0095311 vs. ExPASy TrEMBL
Match:
A0A5A7U6R2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00930 PE=4 SV=1)
HSP 1 Score: 522.7 bits (1345), Expect = 1.5e-144
Identity = 297/429 (69.23%), Postives = 310/429 (72.26%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
MESIKVIP AE+NLNEPSTSHQVEIHSNLK+ NPSSSDQLPTEALPSF+ QEEEEEENAE
Sbjct: 564 MESIKVIP-AEKNLNEPSTSHQVEIHSNLKNLNPSSSDQLPTEALPSFYSQEEEEEENAE 623
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLTNY+LTRDRGRRTI+PPSRFARADCI NSSIETI+D+P SYEDA
Sbjct: 624 DLTNYSLTRDRGRRTIKPPSRFARADCIVNSSIETIEDKPDSYEDA-------------- 683
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
LYK KPHGK IIPCKWVFKKKMIGDLNDKVKFK+RL+AKGFKQKEGVD
Sbjct: 684 -----LYK--------KPHGKIIIPCKWVFKKKMIGDLNDKVKFKARLVAKGFKQKEGVD 743
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
YN+IF PVVKHTSIRILL IVACE LELEQLDVTTAFLHGSLEEEIFMEQP G
Sbjct: 744 YNEIFPPVVKHTSIRILLAIVACENLELEQLDVTTAFLHGSLEEEIFMEQPMG------- 803
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
Sbjct: 804 ------------------------------------------------------------ 863
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 360
RD KLKEIKAQL+ EFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL
Sbjct: 864 ------RDLTKLKEIKAQLSAEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 891
Query: 361 CRFNMANSKVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLT 420
CRFNMANSKVVSTPLAQH KISAR S KDPTD+QAMSYVPY NA GSLMYL+VCTRPDL
Sbjct: 924 CRFNMANSKVVSTPLAQHIKISARGSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLA 891
Query: 421 HSSSLVSRY 430
HSSSLVSRY
Sbjct: 984 HSSSLVSRY 891
BLAST of Cmc04g0095311 vs. ExPASy TrEMBL
Match:
A0A5D3BAM8 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00260 PE=4 SV=1)
HSP 1 Score: 516.2 bits (1328), Expect = 1.4e-142
Identity = 286/429 (66.67%), Postives = 299/429 (69.70%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
M+SIKVIPSAE NLNEPSTSHQVEIHSNLKDSNPSSSDQLPT+A PSFHPQEEEEEENAE
Sbjct: 289 MDSIKVIPSAEHNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTKAFPSFHPQEEEEEENAE 348
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLTNY+LTRDRGR+TIRPPSRFARADCIANSSIETI+DEPYSY+DALCSRH+NQWKEAMN
Sbjct: 349 DLTNYSLTRDRGRKTIRPPSRFARADCIANSSIETIEDEPYSYKDALCSRHNNQWKEAMN 408
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
DELNSLYKNDTWELVE PHGKSIIPCKWVFKKKMIG LNDKVKFK+RL+AKGF+QKE
Sbjct: 409 DELNSLYKNDTWELVETPHGKSIIPCKWVFKKKMIGYLNDKVKFKARLVAKGFEQKE--- 468
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
DVTTAFL GSLEEEI MEQPKGFEVKGK
Sbjct: 469 -------------------------------DVTTAFLRGSLEEEILMEQPKGFEVKGKM 528
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
EL
Sbjct: 529 EL---------------------------------------------------------- 588
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 360
DLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL
Sbjct: 589 --------------------------DLGAAKKILGIEILRDRNNNELSLTQKTYTNKVL 599
Query: 361 CRFNMANSKVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLT 420
CRFN+ANSKVVSTPLAQH KISARDS KDPTD+QAMSYVPY NA GSLMYL+VCTRPDL
Sbjct: 649 CRFNLANSKVVSTPLAQHIKISARDSPKDPTDRQAMSYVPYSNATGSLMYLMVCTRPDLA 599
Query: 421 HSSSLVSRY 430
HSSSLVSRY
Sbjct: 709 HSSSLVSRY 599
BLAST of Cmc04g0095311 vs. ExPASy TrEMBL
Match:
A0A5D3CYI6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002160 PE=4 SV=1)
HSP 1 Score: 471.5 bits (1212), Expect = 4.0e-129
Identity = 258/358 (72.07%), Postives = 269/358 (75.14%), Query Frame = 0
Query: 1 MESIKVIPSAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAE 60
ME IKVIPS EQNLNE ST+HQVEIHSNLKDSNPS SDQLPTE LPSFHP EEEE+EN E
Sbjct: 1 MEPIKVIPSTEQNLNESSTNHQVEIHSNLKDSNPSISDQLPTETLPSFHPLEEEEKENTE 60
Query: 61 DLTNYNLTRDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMN 120
DLT+Y+LT DR RRTIRP SRFARA+CIANSSIETI+DEPYSYEDAL SRHSNQWKEAMN
Sbjct: 61 DLTSYSLTGDRRRRTIRPLSRFARANCIANSSIETIEDEPYSYEDALYSRHSNQWKEAMN 120
Query: 121 DELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVD 180
DELNSLYKNDTWE VEKPHGK IIPCKWVFKKKMIGDLN+KVKFK+RL+AKGFKQK
Sbjct: 121 DELNSLYKNDTWEQVEKPHGKIIIPCKWVFKKKMIGDLNNKVKFKARLVAKGFKQKG--- 180
Query: 181 YNKIFSPVVKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKK 240
DVTTAFLHGSLEEEIFMEQP
Sbjct: 181 -------------------------------DVTTAFLHGSLEEEIFMEQP--------- 240
Query: 241 ELVCKLNRSLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVD 300
LIGFIRSLYDPC YYKKLTEGDYIYLLLYVD
Sbjct: 241 ----------------------------CLIGFIRSLYDPCVYYKKLTEGDYIYLLLYVD 287
Query: 301 DMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNK 359
DML+A RDPIKLKEIKAQL+VEFDMKDLGAAKKIL IEILRDRNNNELSLTQKTYTNK
Sbjct: 301 DMLLAGRDPIKLKEIKAQLSVEFDMKDLGAAKKILRIEILRDRNNNELSLTQKTYTNK 287
BLAST of Cmc04g0095311 vs. ExPASy TrEMBL
Match:
A0A5A7TXZ9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00700 PE=4 SV=1)
HSP 1 Score: 464.5 bits (1194), Expect = 4.9e-127
Identity = 248/427 (58.08%), Postives = 316/427 (74.00%), Query Frame = 0
Query: 9 SAEQNLNEPSTSHQVEIHSNLKDSNPSSSDQLPTEALPSFHPQEEEEEENAEDLTNYNLT 68
S + + + S V+I+ KDS DQ + PS + ++ AE+L +Y L
Sbjct: 6 SKQTEVQNHTPSFYVKIYPCHKDS-VIIDDQPQSSGAPS--TSKNRTDKQAENLEDYLLP 65
Query: 69 RDRGRRTIRPPSRFARADCIANSSIETIKDEPYSYEDALCSRHSNQWKEAMNDELNSLYK 128
DR RRT +P R+AR++ I+N S+E +EP +E+AL S ++W A+ +E+NSL+K
Sbjct: 66 IDRERRTTKPLLRYARSEFISNHSLEDDNEEPNIFEEALNSDEKDEWLAAIKNEINSLHK 125
Query: 129 NDTWELVEKPHGKSIIPCKWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVDYNKIFSPV 188
N+T E +P K IIP KWV+KKK +G+ N+KVKFK RL+AKGFKQKEG DY +IFSPV
Sbjct: 126 NETLEFTGRPLNKGIIPSKWVYKKKFLGEKNEKVKFKVRLVAKGFKQKEGADYTEIFSPV 185
Query: 189 VKHTSIRILLTIVACEYLELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKKELVCKLNR 248
V TSIR+LLTIV CE L+LEQ+DVT AFLHGSLEE+++MEQPKGFE KGK +LVCKL +
Sbjct: 186 VS-TSIRVLLTIVTCEDLKLEQMDVTIAFLHGSLEEDLYMEQPKGFEAKGKIDLVCKLKK 245
Query: 249 SLYGLKQSPRCWYKCFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVDDMLIAERD 308
SLYGLKQSPRCW K FDD+I+ IGF+RSLYDPC YYKKLT G IYLLLYVDDML+A ++
Sbjct: 246 SLYGLKQSPRCWNKRFDDFINKIGFMRSLYDPCVYYKKLTNGSLIYLLLYVDDMLLAGKN 305
Query: 309 PIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANS 368
KL EIK QL EF+MKDLG+AK+ILG+EI R R+ L L+QK YT KVL +FNMAN+
Sbjct: 306 LTKLNEIKEQLKNEFEMKDLGSAKRILGMEITRQRSIRGLFLSQKQYTKKVLAKFNMANA 365
Query: 369 KVVSTPLAQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHSSSLVSR 428
K VSTP+ Q K+SA+DS + T++QAMS VPY NAIGSL++L+VCTR DL ++SSLVSR
Sbjct: 366 KAVSTPVGQQFKLSAKDSPNESTERQAMSNVPYSNAIGSLIHLMVCTRHDLAYNSSLVSR 425
Query: 429 YWETQAR 436
Y + R
Sbjct: 426 YMKNHGR 428
BLAST of Cmc04g0095311 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 188.0 bits (476), Expect = 1.7e-47
Identity = 124/349 (35.53%), Postives = 193/349 (55.30%), Query Frame = 0
Query: 87 CIANSSIETIKDEPYSYEDALCSRHSNQWKEAMNDELNSLYKNDTWELVEKPHGKSIIPC 146
CIA + EP +Y +A + W AM+DE+ ++ TWE+ P K I C
Sbjct: 79 CIAKAK------EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGC 138
Query: 147 KWVFKKKMIGDLNDKVKFKSRLIAKGFKQKEGVDYNKIFSPVVKHTSIRILLTIVACEYL 206
KWV+K K D ++K+RL+AKG+ Q+EG+D+ + FSPV K TS++++L I A
Sbjct: 139 KWVYKIKYNSD-GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNF 198
Query: 207 ELEQLDVTTAFLHGSLEEEIFMEQPKGFEVKGKKEL----VCKLNRSLYGLKQSPRCWYK 266
L QLD++ AFL+G L+EEI+M+ P G+ + L VC L +S+YGLKQ+ R W+
Sbjct: 199 TLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFL 258
Query: 267 CFDDYISLIGFIRSLYDPCFYYKKLTEGDYIYLLLYVDDMLIAERDPIKLKEIKAQLNVE 326
F + GF++S D Y+ K+T ++ +L+YVDD++I + + E+K+QL
Sbjct: 259 KFSVTLIGFGFVQSHSDHT-YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSC 318
Query: 327 FDMKDLGAAKKILGIEILRDRNNNELSLTQKTYTNKVLCRFNMANSKVVSTPLAQHNKIS 386
F ++DLG K LG+EI R +++ Q+ Y +L + K S P+ S
Sbjct: 319 FKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS 378
Query: 387 ARDSSKDPTDKQAMSYVPYFNAIGSLMYLIVCTRPDLTHSSSLVSRYWE 432
A S D D +A Y IG LMYL + TR D++ + + +S++ E
Sbjct: 379 AH-SGGDFVDAKA-----YRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
BLAST of Cmc04g0095311 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 82.4 bits (202), Expect = 1.0e-15
Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 0
Query: 95 TIKDEPYSYEDALCSRHSNQWKEAMNDELNSLYKNDTWELVEKPHGKSIIPCKWVFKKKM 154
TIK EP S AL W +AM +EL++L +N TW LV P ++I+ CKWVFK K+
Sbjct: 23 TIKKEPKSVIFAL---KDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKL 82
Query: 155 IGDLNDKVKFKSRLIAKGFKQKEGVDYNKIFSPVVKHTSIRILLTIVACEYLELEQ 211
D + K+RL+AKGF Q+EG+ + + +SPVV+ +IR +L + + LE+ Q
Sbjct: 83 HSD-GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV--AQQLEVGQ 132
BLAST of Cmc04g0095311 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 62.0 bits (149), Expect = 1.4e-09
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 0
Query: 293 IYLLLYVDDMLIAERDPIKLKEIKAQLNVEFDMKDLGAAKKILGIEILRDRNNNELSLTQ 352
+YLLLYVDD+L+ L + QL+ F MKDLG LGI+I + + L L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQ 60
Query: 353 KTYTNKVLCRFNMANSKVVSTPL-AQHNKISARDSSKDPTDKQAMSYVPYFNAIGSLMYL 412
Y ++L M + K +STPL + N + DP+D + + +G+L YL
Sbjct: 61 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD--------FRSIVGALQYL 120
Query: 413 IVCTRPDLTHSSSLV 427
+ TRPD++++ ++V
Sbjct: 121 TL-TRPDISYAVNIV 124
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0033501.1 | 1.7e-145 | 68.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0051442.1 | 3.1e-144 | 69.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0039651.1 | 2.9e-142 | 66.67 | retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]... | [more] |
KAA0062923.1 | 8.2e-129 | 72.07 | retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]... | [more] |
KAA0047818.1 | 1.0e-126 | 58.08 | retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.2e-93 | 46.79 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 9.0e-62 | 34.93 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 1.1e-56 | 35.36 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 2.0e-53 | 33.95 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P25600 | 3.0e-25 | 30.59 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SVP7 | 8.0e-146 | 68.05 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7U6R2 | 1.5e-144 | 69.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3BAM8 | 1.4e-142 | 66.67 | Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... | [more] |
A0A5D3CYI6 | 4.0e-129 | 72.07 | Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... | [more] |
A0A5A7TXZ9 | 4.9e-127 | 58.08 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 1.7e-47 | 35.53 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.0e-15 | 42.24 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00810.1 | 1.4e-09 | 34.07 | DNA/RNA polymerases superfamily protein | [more] |