Cmc04g0094991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0094991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr04: 8114743 .. 8115081 (+)
RNA-Seq Expression	Cmc04g0094991
Synteny	Cmc04g0094991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTATTCCTATGATACCACCCCCACTCTTGTTGGATATTGTGATGCTGATTGGGCAGGTTTAGCTGATGATCGTAAAAGTACGTTTGGAGGATGTTTCTTTTTAGGAAAAAATTTAATTTCTTGGTTAAGTAAGAAGCAAAATTGTGTCTCTTTATCTACAGCTGAAGCTGAATATATAGCAGCAGGTAGTGGTTGCACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATGGCTTTGATCAGAACACTATGACGTTGTATTGTGACAATATGAGCACAATTGATATATCAAAGAATCCTATTCAACACAGTCGAACAAAGCACATTTGA

mRNA sequence

ATGATGTATTCCTATGATACCACCCCCACTCTTGTTGGATATTGTGATGCTGATTGGGCAGGTTTAGCTGATGATCGTAAAAGTACGTTTGGAGGATGTTTCTTTTTAGGAAAAAATTTAATTTCTTGGTTAAGTAAGAAGCAAAATTGTGTCTCTTTATCTACAGCTGAAGCTGAATATATAGCAGCAGGTAGTGGTTGCACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATGGCTTTGATCAGAACACTATGACGTTGTATTGTGACAATATGAGCACAATTGATATATCAAAGAATCCTATTCAACACAGTCGAACAAAGCACATTTGA

Coding sequence (CDS)

ATGATGTATTCCTATGATACCACCCCCACTCTTGTTGGATATTGTGATGCTGATTGGGCAGGTTTAGCTGATGATCGTAAAAGTACGTTTGGAGGATGTTTCTTTTTAGGAAAAAATTTAATTTCTTGGTTAAGTAAGAAGCAAAATTGTGTCTCTTTATCTACAGCTGAAGCTGAATATATAGCAGCAGGTAGTGGTTGCACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATGGCTTTGATCAGAACACTATGACGTTGTATTGTGACAATATGAGCACAATTGATATATCAAAGAATCCTATTCAACACAGTCGAACAAAGCACATTTGA

Protein sequence

MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI

Homology

[Close]

BLAST of Cmc04g0094991 vs. NCBI nr
Match: KAA0055610.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 5.7e-55
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYDTTP LVGYCDADWAG ADDRKST GGCFFLG NLISWLSKKQNCVSLST EAEY
Sbjct: 120 MMYSYDTTPFLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTTEAEY 179

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGSGCTQLIWMKNMLHEYGFDQ+TMTLYCDN S IDISKNP+QHSRTKHI
Sbjct: 180 IAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDNTSAIDISKNPVQHSRTKHI 231

[Close]

BLAST of Cmc04g0094991 vs. NCBI nr
Match: TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 98/112 (87.50%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYDTTPTLVGYCDADWAGLADDRKST GGCFFLG NLI WLSKKQNCVSLST EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           I AGSGCTQLIWM+N+L EYGFDQ+T+TLY DNMS IDISKNP+QHSR KHI
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHI 347

[Close]

BLAST of Cmc04g0094991 vs. NCBI nr
Match: TYK03343.1 (uncharacterized protein E5676_scaffold206G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48
Identity = 97/112 (86.61%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYD TPTL GYCDADWAG ADDRKST GGCFFLG NLIS LSKKQN VSLS AEAEY
Sbjct: 97  MMYSYDITPTLFGYCDADWAGSADDRKSTSGGCFFLGNNLISSLSKKQNRVSLSIAEAEY 156

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGSGCTQLIWMKNMLHEY FDQ+TM LYCDNMS IDISKN +QHSRTK+I
Sbjct: 157 IAAGSGCTQLIWMKNMLHEYCFDQDTMRLYCDNMSAIDISKNLVQHSRTKNI 208

[Close]

BLAST of Cmc04g0094991 vs. NCBI nr
Match: KAA0056181.1 (uncharacterized protein E6C27_scaffold431G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 3.0e-48
Identity = 97/112 (86.61%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYD TPTL GYCDADWAG ADDRKST GGCFFLG NLIS LSKKQN VSLS AEAEY
Sbjct: 112 MMYSYDITPTLFGYCDADWAGSADDRKSTSGGCFFLGNNLISSLSKKQNRVSLSIAEAEY 171

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGSGCTQLIWMKNMLHEY FDQ+TM LYCDNMS IDISKN +QHSRTK+I
Sbjct: 172 IAAGSGCTQLIWMKNMLHEYCFDQDTMRLYCDNMSAIDISKNLVQHSRTKNI 223

[Close]

BLAST of Cmc04g0094991 vs. NCBI nr
Match: MCH85254.1 (putative gag-pol polyprotein [Trifolium medium])

HSP 1 Score: 194.5 bits (493), Expect = 4.9e-46
Identity = 88/112 (78.57%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           ++YSY   P+L GYCDADWAG ADDRKST GGCFFLG NLISW SKKQNCVSLSTAEAEY
Sbjct: 106 ILYSYCEDPSLKGYCDADWAGSADDRKSTSGGCFFLGNNLISWFSKKQNCVSLSTAEAEY 165

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGS C+QL+WMK M+ EY  DQN +TLYCDN+S I+ISKNPIQHSRTKHI
Sbjct: 166 IAAGSSCSQLVWMKQMMKEYNVDQNAITLYCDNLSAINISKNPIQHSRTKHI 217

[Close]

BLAST of Cmc04g0094991 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24
Identity = 55/104 (52.88%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 9    PTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGCT 68
            P L GY DAD AG  D+RKS+ G  F      ISW SK Q CV+LST EAEYIAA     
Sbjct: 1173 PILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGK 1232

Query: 69   QLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
            ++IW+K  L E G  Q    +YCD+ S ID+SKN + H+RTKHI
Sbjct: 1233 EMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHI 1276

[Close]

BLAST of Cmc04g0094991 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-16
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 8    TPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGC 67
            T +L  Y DADWAG  DD  ST G   +LG + ISW SKKQ  V  S+ EAEY +  +  
Sbjct: 1289 TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTS 1348

Query: 68   TQLIWMKNMLHEYGFD-QNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
            ++L W+ ++L E G    +   +YCDN+    +  NP+ HSR KHI
Sbjct: 1349 SELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHI 1394

[Close]

BLAST of Cmc04g0094991 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-16
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 11   LVGYCDADWAGLADDRKSTFGGCF-FLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQ 70
            ++GY D+DWAG   DRKST G  F     NLI W +K+QN V+ S+ EAEY+A      +
Sbjct: 1248 IIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVRE 1307

Query: 71   LIWMKNMLHEYGFD-QNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
             +W+K +L       +N + +Y DN   I I+ NP  H R KHI
Sbjct: 1308 ALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHI 1351

[Close]

BLAST of Cmc04g0094991 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 8    TPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGC 67
            T +L  Y DADWAG  DD  ST G   +LG + ISW SKKQ  V  S+ EAEY +  +  
Sbjct: 1306 TLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTS 1365

Query: 68   TQLIWMKNMLHEYGFD-QNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
            +++ W+ ++L E G        +YCDN+    +  NP+ HSR KHI
Sbjct: 1366 SEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHI 1411

[Close]

BLAST of Cmc04g0094991 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 8   TPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGC 67
           T  LVGY DADWAG  + R+ST G  F L    +SW SKKQ  V+LS+ E EY+A     
Sbjct: 68  TAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEAT 127

Query: 68  TQLIWM 74
            + +W+
Sbjct: 128 QEAVWL 133

[Close]

BLAST of Cmc04g0094991 vs. ExPASy TrEMBL
Match: A0A5D3DLL1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00150 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYDTTP LVGYCDADWAG ADDRKST GGCFFLG NLISWLSKKQNCVSLST EAEY
Sbjct: 120 MMYSYDTTPFLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTTEAEY 179

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGSGCTQLIWMKNMLHEYGFDQ+TMTLYCDN S IDISKNP+QHSRTKHI
Sbjct: 180 IAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDNTSAIDISKNPVQHSRTKHI 231

[Close]

BLAST of Cmc04g0094991 vs. ExPASy TrEMBL
Match: A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.9e-52
Identity = 98/112 (87.50%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYDTTPTLVGYCDADWAGLADDRKST GGCFFLG NLI WLSKKQNCVSLST EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           I AGSGCTQLIWM+N+L EYGFDQ+T+TLY DNMS IDISKNP+QHSR KHI
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHI 347

[Close]

BLAST of Cmc04g0094991 vs. ExPASy TrEMBL
Match: A0A5A7URM6 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold431G00070 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 97/112 (86.61%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYD TPTL GYCDADWAG ADDRKST GGCFFLG NLIS LSKKQN VSLS AEAEY
Sbjct: 112 MMYSYDITPTLFGYCDADWAGSADDRKSTSGGCFFLGNNLISSLSKKQNRVSLSIAEAEY 171

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGSGCTQLIWMKNMLHEY FDQ+TM LYCDNMS IDISKN +QHSRTK+I
Sbjct: 172 IAAGSGCTQLIWMKNMLHEYCFDQDTMRLYCDNMSAIDISKNLVQHSRTKNI 223

[Close]

BLAST of Cmc04g0094991 vs. ExPASy TrEMBL
Match: A0A5D3BUJ1 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold206G00060 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.5e-48
Identity = 97/112 (86.61%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           MMYSYD TPTL GYCDADWAG ADDRKST GGCFFLG NLIS LSKKQN VSLS AEAEY
Sbjct: 97  MMYSYDITPTLFGYCDADWAGSADDRKSTSGGCFFLGNNLISSLSKKQNRVSLSIAEAEY 156

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGSGCTQLIWMKNMLHEY FDQ+TM LYCDNMS IDISKN +QHSRTK+I
Sbjct: 157 IAAGSGCTQLIWMKNMLHEYCFDQDTMRLYCDNMSAIDISKNLVQHSRTKNI 208

[Close]

BLAST of Cmc04g0094991 vs. ExPASy TrEMBL
Match: A0A392MG88 (Putative gag-pol polyprotein OS=Trifolium medium OX=97028 GN=A2U01_0006098 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.4e-46
Identity = 88/112 (78.57%), Postives = 97/112 (86.61%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           ++YSY   P+L GYCDADWAG ADDRKST GGCFFLG NLISW SKKQNCVSLSTAEAEY
Sbjct: 106 ILYSYCEDPSLKGYCDADWAGSADDRKSTSGGCFFLGNNLISWFSKKQNCVSLSTAEAEY 165

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMTLYCDNMSTIDISKNPIQHSRTKHI 113
           IAAGS C+QL+WMK M+ EY  DQN +TLYCDN+S I+ISKNPIQHSRTKHI
Sbjct: 166 IAAGSSCSQLVWMKQMMKEYNVDQNAITLYCDNLSAINISKNPIQHSRTKHI 217

[Close]

BLAST of Cmc04g0094991 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-18
Identity = 47/113 (41.59%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 1   MMYSYDTTPTLVGYCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEY 60
           + YS      L  + DA +    D R+ST G C FLG +LISW SKKQ  VS S+AEAEY
Sbjct: 432 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 491

Query: 61  IAAGSGCTQLIWMKNMLHEYGFDQNTMT-LYCDNMSTIDISKNPIQHSRTKHI 113
            A      +++W+     E     +  T L+CDN + I I+ N + H RTKHI
Sbjct: 492 RALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544

[Close]

BLAST of Cmc04g0094991 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 4.1e-11
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 14  YCDADWAGLADDRKSTFGGCFFLGKNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIW 73
           +CD+DWAG    R+ST G C FLG N+ISW +K+Q  VS S+ E EY A      +L W
Sbjct: 167 FCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of Cmc04g0094991 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055610.1	5.7e-55	91.96	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [...	[more]
TYK23188.1	1.0e-51	87.50	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK03343.1	3.0e-48	86.61	uncharacterized protein E5676_scaffold206G00060 [Cucumis melo var. makuwa]	[more]
KAA0056181.1	3.0e-48	86.61	uncharacterized protein E6C27_scaffold431G00070 [Cucumis melo var. makuwa]	[more]
MCH85254.1	4.9e-46	78.57	putative gag-pol polyprotein [Trifolium medium]	[more]

BLAST of Cmc04g0094991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.2e-24	52.88	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	1.9e-16	43.40	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	5.4e-16	42.31	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.2e-15	42.45	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	1.5e-10	46.97	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc04g0094991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLL1	2.8e-55	91.96	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G...	[more]
A0A5D3DI97	4.9e-52	87.50	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G...	[more]
A0A5A7URM6	1.5e-48	86.61	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v...	[more]
A0A5D3BUJ1	1.5e-48	86.61	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v...	[more]
A0A392MG88	2.4e-46	78.57	Putative gag-pol polyprotein OS=Trifolium medium OX=97028 GN=A2U01_0006098 PE=4 ...	[more]

BLAST of Cmc04g0094991 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.5e-18	41.59	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.1e-11	49.15	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 30..112
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 30..112
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 12..112 e-value: 1.47247E-58 score: 174.964

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0094991.1	Cmc04g0094991.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding