Cmc04g0094021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0094021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 6491967 .. 6493385 (+)
RNA-Seq Expression	Cmc04g0094021
Synteny	Cmc04g0094021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGTTTTGTTGAATGAGTTAAGGGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAGATTATAAAAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCTAAGAAAGGCTTAGAGGTGGAGTTCGAGCTGAGAACAGATGGAACCATTGTTAAACAGGGAAGATTATGTGTTCCAAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCTAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGGCTTATTGGTGGCTTGGAATGAAGCAAGAGATAGCTGGATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTCCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTTGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACATGATTTATATTGATTAAAGAGACATCTACGTTAGACCAGCTAGCTAGATTACATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGCCTTAGTTTACAGAAAGCAATGGGAACAAGGCTAAAGTTTAGTTCATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAGTCTAGTATTGGTATGCCACCATATGAGGCCTTACACGGGAGACCATGCATAACTGCTGTTTGCTGGAATGAAGTGGGAGAGCGAAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGGGAAAATATGAGGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAATAGACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCGTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCACATGTGTTGCAAGAGCAACCCGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTTAG

mRNA sequence

ATGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGTTTTGTTGAATGAGTTAAGGGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAGATTATAAAAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCTAAGAAAGGCTTAGAGGTGGAGTTCGAGCTGAGAACAGATGGAACCATTGTTAAACAGGGAAGATTATGTGTTCCAAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCTAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGGCTTATTGGTGGCTTGGAATGAAGCAAGAGATAGCTGGATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTCCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTTGTACATCCAGTGGACATGATGGTATATGGACATCTACGTTAGACCAGCTAGCTAGATTACATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGCCTTAGTTTACAGAAAGCAATGGGAACAAGGCTAAAGTTTAGTTCATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAGTCTAGTATTGGTATGCCACCATATGAGGCCTTACACGGGAGACCATGCATAACTGCTGTTTGCTGGAATGAAGTGGGAGAGCGAAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGGGAAAATATGAGGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAATAGACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCGTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCACATGTGTTGCAAGAGCAACCCGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTTAG

Coding sequence (CDS)

ATGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGTTTTGTTGAATGAGTTAAGGGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAGATTATAAAAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCTAAGAAAGGCTTAGAGGTGGAGTTCGAGCTGAGAACAGATGGAACCATTGTTAAACAGGGAAGATTATGTGTTCCAAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCTAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGGCTTATTGGTGGCTTGGAATGAAGCAAGAGATAGCTGGATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTCCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTTGTACATCCAGTGGACATGATGGTATATGGACATCTACGTTAGACCAGCTAGCTAGATTACATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGCCTTAGTTTACAGAAAGCAATGGGAACAAGGCTAAAGTTTAGTTCATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAGCTATCAGTCTAGTATTGGTATGCCACCATATGAGGCCTTACACGGGAGACCATGCATAACTGCTGTTTGCTGGAATGAAGTGGGAGAGCGAAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGGGAAAATATGAGGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAATAGACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCGTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCACATGTGTTGCAAGAGCAACCCGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTTAG

Protein sequence

MSRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQKKFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRTLKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLPCTSSGHDGIWTSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRFTSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRIAQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV

Homology

[Close]

BLAST of Cmc04g0094021 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 848.2 bits (2190), Expect = 3.3e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2   SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
           SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 101 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 160

Query: 62  KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
           KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 161 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 220

Query: 122 LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
           LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 221 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 280

Query: 182 CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
            TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 281 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 340

Query: 242 TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
           TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 341 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 400

Query: 302 FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
           FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 401 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 460

Query: 362 AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
           AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 461 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 520

Query: 422 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
           AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 521 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 571

[Close]

BLAST of Cmc04g0094021 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 848.2 bits (2190), Expect = 3.3e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 623  SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 682

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 683  KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 742

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 743  LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 802

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 803  RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 862

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 863  TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 922

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 923  FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 982

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 983  AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1042

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1043 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1093

[Close]

BLAST of Cmc04g0094021 vs. NCBI nr
Match: KAA0059912.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 848.2 bits (2190), Expect = 3.3e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2   SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
           SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 291 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 350

Query: 62  KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
           KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 351 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 410

Query: 122 LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
           LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 411 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 470

Query: 182 CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
            TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 471 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 530

Query: 242 TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
           TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 531 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 590

Query: 302 FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
           FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 591 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 650

Query: 362 AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
           AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 651 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 710

Query: 422 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
           AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 711 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 761

[Close]

BLAST of Cmc04g0094021 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 848.2 bits (2190), Expect = 3.3e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 730  SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 789

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 790  KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 849

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 850  LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 909

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 910  RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 969

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 970  TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1029

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1030 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1089

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1090 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1149

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1150 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1200

[Close]

BLAST of Cmc04g0094021 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 848.2 bits (2190), Expect = 3.3e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 1069 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 1128

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 1129 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 1188

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 1189 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 1248

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 1249 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 1308

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 1309 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1368

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1369 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1428

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1429 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1488

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1489 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1539

[Close]

BLAST of Cmc04g0094021 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 113/420 (26.90%), Postives = 204/420 (48.57%), Query Frame = 0


Query: 30   EDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQKKFEKSKKGLEVEFELRTDGTIVKQGRLC 89
            ++S + + Q  +      +++   + D+ L        K +E   +L+    I  + ++ 
Sbjct: 845  DNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 904

Query: 90   VPNISELKNAILEEAHSSAYAMHLGSTKMYRTLKKAYWWLGMKQEIAGYVDRCLICQQVK 149
            +PN ++L   I+++ H     +H G   +   + + + W G++++I  YV  C  CQ  K
Sbjct: 905  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 964

Query: 150  PVRQRPGGFLNPFPVPEWKWEHITMDFLFGLPCTSSGHDGIW-----------------T 209
                +P G L P P  E  WE ++MDF+  LP  SSG++ ++                 +
Sbjct: 965  SRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAILVPCTKS 1024

Query: 210  STLDQLARLHVDKIVSQYGVPVSIVSDRDPRFTSKFCLSLQKAMGTRLKFSSSFHPQTDG 269
             T +Q AR+   ++++ +G P  I++D D  FTS+            +KFS  + PQTDG
Sbjct: 1025 ITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDG 1084

Query: 270  QSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMPPYEALHG-RPCITA 329
            Q+ERT QT+E +LR        +W  H+ L++ +YNN+  S+  M P+E +H   P ++ 
Sbjct: 1085 QTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSP 1144

Query: 330  VCWNEVGERKLVGPELVQITTNNIKLIRENMRIAQDRQKSYADKRRIDL-EFQVGDQVFL 389
            +      ++     E  Q T    + ++E++     + K Y D +  ++ EFQ GD V +
Sbjct: 1145 LELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMV 1204

Query: 390  KLSPWRGVIRFERKGKLSRRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSMLRKY 430
            K +   G +   +  KL+  + GP+ + ++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1205 KRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc04g0094021 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 113/420 (26.90%), Postives = 204/420 (48.57%), Query Frame = 0


Query: 30   EDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQKKFEKSKKGLEVEFELRTDGTIVKQGRLC 89
            ++S + + Q  +      +++   + D+ L        K +E   +L+    I  + ++ 
Sbjct: 845  DNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 904

Query: 90   VPNISELKNAILEEAHSSAYAMHLGSTKMYRTLKKAYWWLGMKQEIAGYVDRCLICQQVK 149
            +PN ++L   I+++ H     +H G   +   + + + W G++++I  YV  C  CQ  K
Sbjct: 905  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 964

Query: 150  PVRQRPGGFLNPFPVPEWKWEHITMDFLFGLPCTSSGHDGIW-----------------T 209
                +P G L P P  E  WE ++MDF+  LP  SSG++ ++                 +
Sbjct: 965  SRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAILVPCTKS 1024

Query: 210  STLDQLARLHVDKIVSQYGVPVSIVSDRDPRFTSKFCLSLQKAMGTRLKFSSSFHPQTDG 269
             T +Q AR+   ++++ +G P  I++D D  FTS+            +KFS  + PQTDG
Sbjct: 1025 ITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDG 1084

Query: 270  QSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMPPYEALHG-RPCITA 329
            Q+ERT QT+E +LR        +W  H+ L++ +YNN+  S+  M P+E +H   P ++ 
Sbjct: 1085 QTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSP 1144

Query: 330  VCWNEVGERKLVGPELVQITTNNIKLIRENMRIAQDRQKSYADKRRIDL-EFQVGDQVFL 389
            +      ++     E  Q T    + ++E++     + K Y D +  ++ EFQ GD V +
Sbjct: 1145 LELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMV 1204

Query: 390  KLSPWRGVIRFERKGKLSRRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSMLRKY 430
            K +   G +   +  KL+  + GP+ + ++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1205 KRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc04g0094021 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 113/420 (26.90%), Postives = 204/420 (48.57%), Query Frame = 0


Query: 30   EDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQKKFEKSKKGLEVEFELRTDGTIVKQGRLC 89
            ++S + + Q  +      +++   + D+ L        K +E   +L+    I  + ++ 
Sbjct: 845  DNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 904

Query: 90   VPNISELKNAILEEAHSSAYAMHLGSTKMYRTLKKAYWWLGMKQEIAGYVDRCLICQQVK 149
            +PN ++L   I+++ H     +H G   +   + + + W G++++I  YV  C  CQ  K
Sbjct: 905  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 964

Query: 150  PVRQRPGGFLNPFPVPEWKWEHITMDFLFGLPCTSSGHDGIW-----------------T 209
                +P G L P P  E  WE ++MDF+  LP  SSG++ ++                 +
Sbjct: 965  SRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAILVPCTKS 1024

Query: 210  STLDQLARLHVDKIVSQYGVPVSIVSDRDPRFTSKFCLSLQKAMGTRLKFSSSFHPQTDG 269
             T +Q AR+   ++++ +G P  I++D D  FTS+            +KFS  + PQTDG
Sbjct: 1025 ITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDG 1084

Query: 270  QSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMPPYEALHG-RPCITA 329
            Q+ERT QT+E +LR        +W  H+ L++ +YNN+  S+  M P+E +H   P ++ 
Sbjct: 1085 QTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSP 1144

Query: 330  VCWNEVGERKLVGPELVQITTNNIKLIRENMRIAQDRQKSYADKRRIDL-EFQVGDQVFL 389
            +      ++     E  Q T    + ++E++     + K Y D +  ++ EFQ GD V +
Sbjct: 1145 LELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMV 1204

Query: 390  KLSPWRGVIRFERKGKLSRRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSMLRKY 430
            K +   G +   +  KL+  + GP+ + ++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1205 KRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc04g0094021 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 113/420 (26.90%), Postives = 204/420 (48.57%), Query Frame = 0


Query: 30   EDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQKKFEKSKKGLEVEFELRTDGTIVKQGRLC 89
            ++S + + Q  +      +++   + D+ L        K +E   +L+    I  + ++ 
Sbjct: 845  DNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 904

Query: 90   VPNISELKNAILEEAHSSAYAMHLGSTKMYRTLKKAYWWLGMKQEIAGYVDRCLICQQVK 149
            +PN ++L   I+++ H     +H G   +   + + + W G++++I  YV  C  CQ  K
Sbjct: 905  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 964

Query: 150  PVRQRPGGFLNPFPVPEWKWEHITMDFLFGLPCTSSGHDGIW-----------------T 209
                +P G L P P  E  WE ++MDF+  LP  SSG++ ++                 +
Sbjct: 965  SRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAILVPCTKS 1024

Query: 210  STLDQLARLHVDKIVSQYGVPVSIVSDRDPRFTSKFCLSLQKAMGTRLKFSSSFHPQTDG 269
             T +Q AR+   ++++ +G P  I++D D  FTS+            +KFS  + PQTDG
Sbjct: 1025 ITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDG 1084

Query: 270  QSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMPPYEALHG-RPCITA 329
            Q+ERT QT+E +LR        +W  H+ L++ +YNN+  S+  M P+E +H   P ++ 
Sbjct: 1085 QTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSP 1144

Query: 330  VCWNEVGERKLVGPELVQITTNNIKLIRENMRIAQDRQKSYADKRRIDL-EFQVGDQVFL 389
            +      ++     E  Q T    + ++E++     + K Y D +  ++ EFQ GD V +
Sbjct: 1145 LELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMV 1204

Query: 390  KLSPWRGVIRFERKGKLSRRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSMLRKY 430
            K +   G +   +  KL+  + GP+ + ++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1205 KRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc04g0094021 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 113/420 (26.90%), Postives = 204/420 (48.57%), Query Frame = 0


Query: 30   EDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQKKFEKSKKGLEVEFELRTDGTIVKQGRLC 89
            ++S + + Q  +      +++   + D+ L        K +E   +L+    I  + ++ 
Sbjct: 845  DNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQIL 904

Query: 90   VPNISELKNAILEEAHSSAYAMHLGSTKMYRTLKKAYWWLGMKQEIAGYVDRCLICQQVK 149
            +PN ++L   I+++ H     +H G   +   + + + W G++++I  YV  C  CQ  K
Sbjct: 905  LPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINK 964

Query: 150  PVRQRPGGFLNPFPVPEWKWEHITMDFLFGLPCTSSGHDGIW-----------------T 209
                +P G L P P  E  WE ++MDF+  LP  SSG++ ++                 +
Sbjct: 965  SRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAILVPCTKS 1024

Query: 210  STLDQLARLHVDKIVSQYGVPVSIVSDRDPRFTSKFCLSLQKAMGTRLKFSSSFHPQTDG 269
             T +Q AR+   ++++ +G P  I++D D  FTS+            +KFS  + PQTDG
Sbjct: 1025 ITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDG 1084

Query: 270  QSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNSYQSSIGMPPYEALHG-RPCITA 329
            Q+ERT QT+E +LR        +W  H+ L++ +YNN+  S+  M P+E +H   P ++ 
Sbjct: 1085 QTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSP 1144

Query: 330  VCWNEVGERKLVGPELVQITTNNIKLIRENMRIAQDRQKSYADKRRIDL-EFQVGDQVFL 389
            +      ++     E  Q T    + ++E++     + K Y D +  ++ EFQ GD V +
Sbjct: 1145 LELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMV 1204

Query: 390  KLSPWRGVIRFERKGKLSRRYIGPYQITERVGPAAYRLELPIELARI-HDVFHVSMLRKY 430
            K +   G +   +  KL+  + GP+ + ++ GP  Y L+LP  +  +    FHVS L KY
Sbjct: 1205 KRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc04g0094021 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 1031 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 1090

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 1091 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 1150

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 1151 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 1210

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 1211 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 1270

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 1271 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1330

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1331 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1390

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1391 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1450

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1451 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1501

[Close]

BLAST of Cmc04g0094021 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 1069 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 1128

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 1129 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 1188

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 1189 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 1248

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 1249 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 1308

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 1309 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1368

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1369 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1428

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1429 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1488

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1489 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1539

[Close]

BLAST of Cmc04g0094021 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 1069 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 1128

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 1129 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 1188

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 1189 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 1248

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 1249 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 1308

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 1309 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1368

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1369 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1428

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1429 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1488

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1489 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1539

[Close]

BLAST of Cmc04g0094021 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 1069 SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 1128

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 1129 KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 1188

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 1189 LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 1248

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 1249 RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 1308

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 1309 TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1368

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1369 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1428

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1429 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1488

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1489 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1539

[Close]

BLAST of Cmc04g0094021 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.6e-242
Identity = 426/471 (90.45%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 2    SRLPKSALCGIRVVLLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTKIIKRQSEDSNLQK 61
            SRLPKSALCGIRV LLNELRGSKAVVTTEDSGSLLAQFQVRSSLVT+I++RQSEDSNLQK
Sbjct: 701  SRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQK 760

Query: 62   KFEKSKKGLEVEFELRTDGTIVKQGRLCVPNISELKNAILEEAHSSAYAMHLGSTKMYRT 121
            KFEKSKKGLEVEFELRTDG IVKQGRLCVPNISELKNAILEEAHSSAYAMH GSTKMYRT
Sbjct: 761  KFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRT 820

Query: 122  LKKAYWWLGMKQEIAGYVDRCLICQQVKPVRQRPGGFLNPFPVPEWKWEHITMDFLFGLP 181
            LKK YWW GMKQEIA YVDRCLICQQVKPVRQRPGGFLNP PVPEWKWEHITMDFLFGLP
Sbjct: 821  LKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLP 880

Query: 182  CTSSGHDGIW-----------------TSTLDQLARLHVDKIVSQYGVPVSIVSDRDPRF 241
             TSSGHDGIW                 TSTLDQLARL+VDKIVSQYGVPVSIVSDRDPRF
Sbjct: 881  RTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRF 940

Query: 242  TSKFCLSLQKAMGTRLKFSSSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 301
            TSKF  SLQKAMGT LKFS+SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME
Sbjct: 941  TSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLME 1000

Query: 302  FAYNNSYQSSIGMPPYEALHGRPCITAVCWNEVGERKLVGPELVQITTNNIKLIRENMRI 361
            FAYNN+YQSSIGM PYEAL+GRPC T VCWNEVGERKLVGPELVQITTNNIKLIREN+R 
Sbjct: 1001 FAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRK 1060

Query: 362  AQDRQKSYADKRRIDLEFQVGDQVFLKLSPWRGVIRFERKGKLSRRYIGPYQITERVGPA 421
            AQDRQKSYADKRR +LEFQVGDQVFLKLSPWRGVIRF RKGKLS RYIGPYQITERVGPA
Sbjct: 1061 AQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPA 1120

Query: 422  AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYVEEPV 456
            AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLSYVEEPV
Sbjct: 1121 AYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPV 1171

[Close]

BLAST of Cmc04g0094021 vs. TAIR 10
Match: AT1G42190.1 (GAG/POL/ENV polyprotein )

HSP 1 Score: 43.1 bits (100), Expect = 6.9e-04
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 406 YRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLSYV 452
           Y+L+LP  +   H VFHVSMLRK I    +V+ E P +L E++  V
Sbjct: 2   YKLDLPTLMDAFHKVFHVSMLRKCITHQENVISEPPPDLLENMMIV 47

The following BLAST results are available for this feature:

BLAST of Cmc04g0094021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053246.1	3.3e-242	90.45	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050493.1	3.3e-242	90.45	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0059912.1	3.3e-242	90.45	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0050527.1	3.3e-242	90.45	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	3.3e-242	90.45	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0094021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	6.0e-45	26.90	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	6.0e-45	26.90	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	6.0e-45	26.90	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	6.0e-45	26.90	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	6.0e-45	26.90	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc04g0094021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	1.6e-242	90.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	1.6e-242	90.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	1.6e-242	90.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.6e-242	90.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	1.6e-242	90.45	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of Cmc04g0094021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42190.1	6.9e-04	45.65	GAG/POL/ENV polyprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 53..149 e-value: 2.7E-17 score: 64.8
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 261..455
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 261..455
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 95..150 e-value: 1.1E-17 score: 63.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 160..340 e-value: 4.6E-35 score: 122.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 194..307 score: 13.944474
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 160..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0094021.1	Cmc04g0094021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding