Cmc04g0092801 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0092801
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L31
Location	CMiso1.1chr04: 4771070 .. 4771951 (-)
RNA-Seq Expression	Cmc04g0092801
Synteny	Cmc04g0092801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGATTGGAGACGCGACAAGGCCTTGAAGAAGAGCTCATCTCCCTCTTATCCTCACTCACCACAAGCAAACGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCTCGGCCGTTGCACCGCCCAAGCACAAGGTACTTTCACGTTTCACCCTTCTCTTCACTCCTCAATTTTCCAAGACGCTGATTATTCATTTCCGTTCGCCCCCAATTTTTGCACAATTTCCAGGAATCTGGAGCTAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGGACGTGTGGTCGGGAAACCATCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAGAAGATTCTGAAGATTTCAGTTGGGTTGGTAATCAGTTAAATTCCAAATGCATATTGAGATTTTTGGTTCTTTCAATTGCTTTATATATATCCTCCGTGTAATTTAGCAAAATCGACACTAATTTGTCTGAACCAAACGATTTGTTTCTTTGCCTCGCACTGCCTTTGCTAATTCTAAATGCTCAAACTGTTGATGAAGTTCTGAATGCACCAATGGATTAGTGTTTGGTGGGTGAGGAAATTCATGAAGGAAAGAAAGTTCGAGAAATTAGATCAGGAATTGATTGGTAACTGACCATTTTG

mRNA sequence

ATGAGTGATTGGAGACGCGACAAGGCCTTGAAGAAGAGCTCATCTCCCTCTTATCCTCACTCACCACAAGCAAACGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCTCGGCCGTTGCACCGCCCAAGCACAAGGAATCTGGAGCTAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGGACGTGTGGTCGGGAAACCATCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAGAAGATTCTGAAGATTTCAGTTGGGTTGGTAATCAGTTAAATTCCAAATGCATATTGAGATTTTTGGTTCTTTCAATTGCTTTATATATATCCTCCGTGTAATTTAGCAAAATCGACACTAATTTGTCTGAACCAAACGATTTGTTTCTTTGCCTCGCACTGCCTTTGCTAATTCTAAATGCTCAAACTGTTGATGAAGTTCTGAATGCACCAATGGATTAGTGTTTGGTGGGTGAGGAAATTCATGAAGGAAAGAAAGTTCGAGAAATTAGATCAGGAATTGATTGGTAACTGACCATTTTG

Coding sequence (CDS)

ATGAGTGATTGGAGACGCGACAAGGCCTTGAAGAAGAGCTCATCTCCCTCTTATCCTCACTCACCACAAGCAAACGCAGCAATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGGCCAATTTCCTCGGCCGTTGCACCGCCCAAGCACAAGGAATCTGGAGCTAGAAGTCACCGGCCGGTGGTGACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCAGTGGACGTGTGGTCGGGAAACCATCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTGATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAG

Protein sequence

MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

Homology

[Close]

BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_008466538.1 (PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 50S ribosomal protein l31 [Cucumis melo subsp. melo])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSH
Sbjct: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 161

[Close]

BLAST of Cmc04g0092801 vs. NCBI nr
Match: KAA0041569.1 (50S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 5   RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVV 64
           RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSHRPVV
Sbjct: 30  RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVV 89

Query: 65  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 124
           TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV
Sbjct: 90  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 149

Query: 125 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 150 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 186

[Close]

BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_038896266.1 (50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 147/161 (91.30%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MS W RDKAL K+SSPSYPHSP ANAAMALNLTNSFLQLQRP S AVAPPK+KESGAR+H
Sbjct: 1   MSGWTRDKAL-KNSSPSYPHSPLANAAMALNLTNSFLQLQRPSSLAVAPPKNKESGARTH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDSKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEI+LP+K+KS KGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKKKSGKGKKK 160

[Close]

BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_004147854.2 (50S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypothetical protein Csa_001806 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 5.5e-67
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 28  MALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87
           MALNLTNSFLQLQRPIS AVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 1   MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGEL 60

Query: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 148 ILPSKRKSAKGKKK 162
           ILPSKRKSAKGKKK
Sbjct: 121 ILPSKRKSAKGKKK 134

[Close]

BLAST of Cmc04g0092801 vs. NCBI nr
Match: XP_022136375.1 (LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charantia])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MSDWRRDKALKKSS-----SPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKES 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSF  LQR I  AVAP K KE 
Sbjct: 1   MSEWPCDKALKNSSPNSALPPTYPSSSHPNAAM-LNLTNSF--LQRRIPPAVAPAK-KEF 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 163

[Close]

BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q9FWS4 (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-45
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 28  MALNLTNSF---------LQLQRPISSAVAPPKHKESGARSHRPVV--TCRKKDLHPQFY 87
           MA++L NSF         LQL++P+ +AV     K+S  RS   VV  TCRKK+LHP+F+
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAV--KGGKQSVRRSSNTVVQITCRKKELHPEFH 60

Query: 88  EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQ 147
           EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS+
Sbjct: 61  EDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSE 120

Query: 148 LMEIPVLKGEIILPSKR-KSAKGKKK 162
           +MEIPVLKGEII+P+K+ K  KGKKK
Sbjct: 121 IMEIPVLKGEIIMPTKKSKGPKGKKK 144

[Close]

BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: P82249 (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.2e-44
Identity = 91/134 (67.91%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 28  MALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87
           M L L+N FL         +  PK   S   + RP  +CRK D+HP+F EDAKVYCNGEL
Sbjct: 1   MVLTLSNQFLAKIPATPKTLTLPKTSSS---TLRPQWSCRKSDIHPEFREDAKVYCNGEL 60

Query: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147
           VMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFRKK+GEL+Q+MEIPVLKGEI
Sbjct: 61  VMTTGGTQKDYTVEVWSGNHPFYLGNRSALLLDADQVEKFRKKYGELTQIMEIPVLKGEI 120

Query: 148 ILPSKRKSAKGKKK 162
           ILP K+KS K KKK
Sbjct: 121 ILPPKKKS-KAKKK 130

[Close]

BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q7V9Y9 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF 127
           KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F
Sbjct: 3   KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRF 62

Query: 128 RKKFG 133
            +K+G
Sbjct: 63  MRKYG 66

[Close]

BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q31L35 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 127
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 128 FRKKFGEL 135
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]

BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot
Match: Q5N0T7 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEK 127
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 128 FRKKFGEL 135
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]

BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: E5GCI4 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.2e-85
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSH
Sbjct: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 161

[Close]

BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A1S3CRJ2 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.2e-85
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSH 60
           MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSH
Sbjct: 1   MSDWRRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSH 60

Query: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120
           RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD
Sbjct: 61  RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVD 120

Query: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 121 ADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 161

[Close]

BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A5A7TJN6 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00310 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.5e-82
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 5   RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVV 64
           RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPIS AVAPPKHKESGARSHRPVV
Sbjct: 30  RRDKALKKSSSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVV 89

Query: 65  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 124
           TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV
Sbjct: 90  TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQV 149

Query: 125 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 162
           EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Sbjct: 150 EKFRKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK 186

[Close]

BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A0A0LDC9 (50S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.7e-67
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 28  MALNLTNSFLQLQRPISSAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDAKVYCNGEL 87
           MALNLTNSFLQLQRPIS AVAPPK KESGARS+RPVVTCRKKDLHPQFYEDAKVYCNGEL
Sbjct: 1   MALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDAKVYCNGEL 60

Query: 88  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 147
           VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI
Sbjct: 61  VMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEI 120

Query: 148 ILPSKRKSAKGKKK 162
           ILPSKRKSAKGKKK
Sbjct: 121 ILPSKRKSAKGKKK 134

[Close]

BLAST of Cmc04g0092801 vs. ExPASy TrEMBL
Match: A0A6J1C3Q3 (50S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008063 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MSDWRRDKALKKSS-----SPSYPHSPQANAAMALNLTNSFLQLQRPISSAVAPPKHKES 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSF  LQR I  AVAP K KE 
Sbjct: 1   MSEWPCDKALKNSSPNSALPPTYPSSSHPNAAM-LNLTNSF--LQRRIPPAVAPAK-KEF 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 163

[Close]

BLAST of Cmc04g0092801 vs. TAIR 10
Match: AT1G75350.1 (Ribosomal protein L31 )

HSP 1 Score: 184.1 bits (466), Expect = 8.8e-47
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 28  MALNLTNSF---------LQLQRPISSAVAPPKHKESGARSHRPVV--TCRKKDLHPQFY 87
           MA++L NSF         LQL++P+ +AV     K+S  RS   VV  TCRKK+LHP+F+
Sbjct: 1   MAVSLPNSFLQISPCVPSLQLRKPVMAAV--KGGKQSVRRSSNTVVQITCRKKELHPEFH 60

Query: 88  EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQ 147
           EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+VDADQVEKFRK+F  LS+
Sbjct: 61  EDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSE 120

Query: 148 LMEIPVLKGEIILPSKR-KSAKGKKK 162
           +MEIPVLKGEII+P+K+ K  KGKKK
Sbjct: 121 IMEIPVLKGEIIMPTKKSKGPKGKKK 144

The following BLAST results are available for this feature:

BLAST of Cmc04g0092801 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466538.1	1.7e-84	99.38	PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 5...	[more]
KAA0041569.1	1.8e-81	99.36	50S ribosomal protein L31 [Cucumis melo var. makuwa]	[more]
XP_038896266.1	2.2e-76	91.30	50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S...	[more]
XP_004147854.2	5.5e-67	97.76	50S ribosomal protein L31, chloroplastic [Cucumis sativus] >KGN59985.1 hypotheti...	[more]
XP_022136375.1	1.3e-63	83.23	LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charant...	[more]

BLAST of Cmc04g0092801 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWS4	1.2e-45	67.12	50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3...	[more]
P82249	5.2e-44	67.91	50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 P...	[more]
Q7V9Y9	4.2e-17	58.46	50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / S...	[more]
Q31L35	4.2e-17	58.82	50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80...	[more]
Q5N0T7	4.2e-17	58.82	50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S...	[more]

BLAST of Cmc04g0092801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GCI4	8.2e-85	99.38	50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 P...	[more]
A0A1S3CRJ2	8.2e-85	99.38	50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925...	[more]
A0A5A7TJN6	8.5e-82	99.36	50S ribosomal protein L31, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0LDC9	2.7e-67	97.76	50S ribosomal protein L31 OS=Cucumis sativus OX=3659 GN=Csa_3G859720 PE=3 SV=1	[more]
A0A6J1C3Q3	6.1e-64	83.23	50S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Cmc04g0092801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75350.1	8.8e-47	67.12	Ribosomal protein L31	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002150	Ribosomal protein L31	PRINTS	PR01249	RIBOSOMALL31	coord: 97..112 score: 49.69 coord: 68..85 score: 33.33
IPR002150	Ribosomal protein L31	PFAM	PF01197	Ribosomal_L31	coord: 68..132 e-value: 1.1E-16 score: 60.7
IPR002150	Ribosomal protein L31	TIGRFAM	TIGR00105	TIGR00105	coord: 68..133 e-value: 5.0E-15 score: 53.3
IPR002150	Ribosomal protein L31	PANTHER	PTHR33280	50S RIBOSOMAL PROTEIN L31, CHLOROPLASTIC	coord: 28..161
IPR042105	Ribosomal protein L31 superfamily	GENE3D	4.10.830.30	Ribosomal protein L31	coord: 68..135 e-value: 3.6E-17 score: 64.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33280:SF5	50S RIBOSOMAL PROTEIN L31	coord: 28..161
IPR034704	L28p-like	SUPERFAMILY	143800	L28p-like	coord: 68..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0092801.1	Cmc04g0092801.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome