Cmc04g0092011 (gene) Melon (Charmono) v1.1

Overview
NameCmc04g0092011
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 3797411 .. 3798853 (+)
RNA-Seq ExpressionCmc04g0092011
SyntenyCmc04g0092011
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACAGTACAGGAAAAGGGCACGAGCAATGTCTGAGATATACACATGGATTATAGTATGAGACAAGGACATGTCATGTAATAAGAACAAGAAAATATGAAAATTTTTATATTTGAATTTTTAGTATATCCCTATCCCCCCCATTTGAAATGTCACAAAGACAAAAGGAGTCAGGTGAAACAGAGCAAATGAGACATATGCCCCTTCAGTTTATTTTTATATTGCACATGTCTTCCCATTGGAGCCTCCCCCTGCCCCAATTACTAATTTACAACCTTTCCTTTTCTAAATAAAATCATTAGTCACATTGGAATTGGAATTGGAATTGGAATTGGAATTGGAATTGGTCTATAGAATTTCTCATTGAATAATTTGAAATCAATCGCTTAATATACAGAAAATAGACCTCTGGCCGAATTAGCAACACTTTCTGTTGTTTTTCTTCTTCCTCTTCTTCCTTCTCGGTTCCGCCCCGACTCCGATTCGAGCTCGGGACGACACGGTGAATTGATCCCTCCACCAGTTTTTGCCATCTCCATAAGCATTCTCCGGAGCTAAAACAAGTTCCCCAATAATCACATTACACTTCCTTCACTTTGTTTCTTTTTTTTTTTTCTCTCAAAGAAAAACCCCCATAAATCCTCTAGCCTTTTCTGTGTATATGTAGCAAGTAGGATGTGGAAGGTCCAAAAAAGGGGAAAAAATGAAAACCCAGATTAGATTAAATTAAAATTACAACCCATCTCGGGTAACTCAACCGAGTCAAATCTGGATCTTTGACTCGCTCCTTTTGATGTTGTTCTTGTTTATGTTCTTCACTTTATCTGCAAAGTTGCTGCCAATTCAGACGGATTTACAAAAACACCCGCATTACCAAATGGATTTTTCGGCCAACCCATGAAGCAAAGGCCGAGATTCCGGCCACAAATCCAGCCCAGTTCTGATTCCGATATGACAATAACTTTGAAAATCGTCCAATTTCACGAACCGCCCCGAGTTCGGAGACTCGGATCTAGAGATGAACCGGATAACTTCTTCGAAAACCGACTCGTCGCAAGGGATTGCCAACGGACCTTGATTGGTGAACCCATACTCCTCTTCGGCTTGGACCAGAAGCTTCTTGAAAACCGGGTGGTTCAAGTAAGTGGCACGGACAACGAACCGCCGCGAGCTTGTTCCGACGCATACAGCCACGTGTCCGGCGGGTACGTCGGAAGGGATACGATTGGCTGACATTCTAGCTTTGTTGCGCCACCGTCGTAGCATTTGCCGGAGCCTGACAATGTGGCGGATTTTGCTGCATTTTCCGAGCCCGGCCGACATATTCCGATTGGAGGAAAAACAAAAAGGGGAGGTTGAAGGTGAGATTTGGAGGATGTGTTTGGAAGTTGGGGAGTTTTTGCAATGGCAATGGTGGAGGGTTTTATAGACATTCGGTTGACGA

mRNA sequence

TTACAGTACAGGAAAAGGGCACGAGCAATGTCTGAGATATACACATGGATTATAGTATGAGACAAGGACATGTCATGTAATAAGAACAAGAAAATATGAAAATTTTTATATTTGAATTTTTAGTATATCCCTATCCCCCCCATTTGAAATGTCACAAAGACAAAAGGAGTCAGGTGAAACAGAGCAAATGAGACATATGCCCCTTCAGTTTATTTTTATATTGCACATGTCTTCCCATTGGAGCCTCCCCCTGCCCCAATTACTAATTTACAACCTTTCCTTTTCTAAATAAAATCATTAGTCACATTGGAATTGGAATTGGAATTGGAATTGGAATTGGAATTGGTCTATAGAATTTCTCATTGAATAATTTGAAATCAATCGCTTAATATACAGAAAATAGACCTCTGGCCGAATTAGCAACACTTTCTGTTGTTTTTCTTCTTCCTCTTCTTCCTTCTCGGTTCCGCCCCGACTCCGATTCGAGCTCGGGACGACACGGTGAATTGATCCCTCCACCAGTTTTTGCCATCTCCATAAGCATTCTCCGGAGCTAAAACAAGTTCCCCAATAATCACATTACACTTCCTTCACTTTGTTTCTTTTTTTTTTTTCTCTCAAAGAAAAACCCCCATAAATCCTCTAGCCTTTTCTGTGTATATGTAGCAAGTAGGATGTGGAAGGTCCAAAAAAGGGGAAAAAATGAAAACCCAGATTAGATTAAATTAAAATTACAACCCATCTCGGGTAACTCAACCGAGTCAAATCTGGATCTTTGACTCGCTCCTTTTGATGTTGTTCTTGTTTATGTTCTTCACTTTATCTGCAAAGTTGCTGCCAATTCAGACGGATTTACAAAAACACCCGCATTACCAAATGGATTTTTCGGCCAACCCATGAAGCAAAGGCCGAGATTCCGGCCACAAATCCAGCCCAGTTCTGATTCCGATATGACAATAACTTTGAAAATCGTCCAATTTCACGAACCGCCCCGAGTTCGGAGACTCGGATCTAGAGATGAACCGGATAACTTCTTCGAAAACCGACTCGTCGCAAGGGATTGCCAACGGACCTTGATTGGTGAACCCATACTCCTCTTCGGCTTGGACCAGAAGCTTCTTGAAAACCGGGTGGTTCAAGTAAGTGGCACGGACAACGAACCGCCGCGAGCTTGTTCCGACGCATACAGCCACGTGTCCGGCGGGTACGTCGGAAGGGATACGATTGGCTGACATTCTAGCTTTGTTGCGCCACCGTCGTAGCATTTGCCGGAGCCTGACAATGTGGCGGATTTTGCTGCATTTTCCGAGCCCGGCCGACATATTCCGATTGGAGGAAAAACAAAAAGGGGAGGTTGAAGGTGAGATTTGGAGGATGTGTTTGGAAGTTGGGGAGTTTTTGCAATGGCAATGGTGGAGGGTTTTATAGACATTCGGTTGACGA

Coding sequence (CDS)

ATGAAGCAAAGGCCGAGATTCCGGCCACAAATCCAGCCCAGTTCTGATTCCGATATGACAATAACTTTGAAAATCGTCCAATTTCACGAACCGCCCCGAGTTCGGAGACTCGGATCTAGAGATGAACCGGATAACTTCTTCGAAAACCGACTCGTCGCAAGGGATTGCCAACGGACCTTGATTGGTGAACCCATACTCCTCTTCGGCTTGGACCAGAAGCTTCTTGAAAACCGGGTGGTTCAAGTAAGTGGCACGGACAACGAACCGCCGCGAGCTTGTTCCGACGCATACAGCCACGTGTCCGGCGGGTACGTCGGAAGGGATACGATTGGCTGA

Protein sequence

MKQRPRFRPQIQPSSDSDMTITLKIVQFHEPPRVRRLGSRDEPDNFFENRLVARDCQRTLIGEPILLFGLDQKLLENRVVQVSGTDNEPPRACSDAYSHVSGGYVGRDTIG
Homology
[Close]
BLAST of Cmc04g0092011 vs. NCBI nr
Match: KAF3446758.1 (hypothetical protein FNV43_RR11938 [Rhamnella rubrinervis])

HSP 1 Score: 112.5 bits (280), Expect = 2.4e-21
Identity = 53/107 (49.53%), Postives = 75/107 (70.09%), Query Frame = 0 

Query: 1   MKQRPRFRPQIQPSSDSDMTITLKIVQFHEPPRVRRLGSRDEPDNFFENRLVARDCQRTL 60
           MKQR R  P++Q +SD+D+ ++LK+++  +   V RLGS +EP+ F E R VAR+ +RTL
Sbjct: 1   MKQRSRIGPEVQVTSDADVAVSLKVLEIEKSGGVTRLGSGNEPEEFLEKRFVARNGERTL 60

Query: 61  IGEPILLFGLDQKLLENRVVQVSGTDNEPPRACSDAYSHVSGGYVGR 108
           +GE +  FGLD+K+LE+ VVQV   DNE     +DA  HVSGG +GR
Sbjct: 61  VGEAVFFFGLDKKVLEDGVVQVRRADNESSATPTDADGHVSGGDIGR 107

[Close]
BLAST of Cmc04g0092011 vs. NCBI nr
Match: EYU37908.1 (hypothetical protein MIMGU_mgv1a016354mg [Erythranthe guttata])

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-09
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 0 

Query: 1   MKQRPRFRPQIQ---PSSDSDMTITLKIVQFHEPPRVRRLGSRDEPDNFFENRLVARDCQ 60
           ++QRPRF  +I+   P + + +  +L++       RV R+ S  E ++ FE R VAR+ Q
Sbjct: 11  IEQRPRFVVKIRVLTPHAAASVAASLRV-------RVNRVDSGHESEDLFEERFVARNRQ 70

Query: 61  R-TLIGEPILLFGLDQKLLENRVVQVSGTDNEPPRACSDAYSHVSGGYVGRDTI 111
           R  +IGE +LL G+ ++  EN V+QVSG D+EPP     A  HVS  +V R ++
Sbjct: 71  RPRVIGESVLLLGVAEQPPENGVIQVSGADDEPPGTAPHADRHVSRRHVRRKSV 117

[Close]
BLAST of Cmc04g0092011 vs. ExPASy TrEMBL
Match: A0A022RDV3 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016354mg PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.0e-09
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 0 

Query: 1   MKQRPRFRPQIQ---PSSDSDMTITLKIVQFHEPPRVRRLGSRDEPDNFFENRLVARDCQ 60
           ++QRPRF  +I+   P + + +  +L++       RV R+ S  E ++ FE R VAR+ Q
Sbjct: 11  IEQRPRFVVKIRVLTPHAAASVAASLRV-------RVNRVDSGHESEDLFEERFVARNRQ 70

Query: 61  R-TLIGEPILLFGLDQKLLENRVVQVSGTDNEPPRACSDAYSHVSGGYVGRDTI 111
           R  +IGE +LL G+ ++  EN V+QVSG D+EPP     A  HVS  +V R ++
Sbjct: 71  RPRVIGESVLLLGVAEQPPENGVIQVSGADDEPPGTAPHADRHVSRRHVRRKSV 117

The following BLAST results are available for this feature:
BLAST of Cmc04g0092011 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3446758.12.4e-2149.53hypothetical protein FNV43_RR11938 [Rhamnella rubrinervis][more]
EYU37908.12.1e-0938.60hypothetical protein MIMGU_mgv1a016354mg [Erythranthe guttata][more]
BLAST of Cmc04g0092011 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc04g0092011 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A022RDV31.0e-0938.60Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016354mg PE... [more]
BLAST of Cmc04g0092011 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc04g0092011.1Cmc04g0092011.1mRNA