Cmc04g0090991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0090991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	transcription factor HY5
Location	CMiso1.1chr04: 3048339 .. 3052300 (+)
RNA-Seq Expression	Cmc04g0090991
Synteny	Cmc04g0090991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTCCATTGCCTTTTAATAAGCAGAGCTTTCCAATTTTTCATCTCATATCAATCTTTTCGGTGTTGATTATTCGCCGGCGTAATGCAGGGGCGAGCCGCCGCCGCCGCCATCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGGTTTAATTTGAATTTCTTTCGTTTTCTTTACGATCTCTAGCGGAAATATTGAGCGTGAAGTAGTGCAGCCGGATGTCATTAGGAAGAGCTTTTTTTTTTCCTTGTTCTTTTGATTCATCGGAGACGAGTTTGTTTTTCAAAATCAAATCATTGTTTCATTTTATCATCGTTCGTTTTACTGTCTTTTTCCACGGCGAAATTGCAAAAGCGGCTCTGTATTCGATTGAAGCATATTTTCCTAACCTAATTTCGTAACAATATGACAATTTCTCCTAAGCGATTATCCTTCCTCGTTCAAGCTTGTGTAAAAATTGTTGACGTAGATCCGTGTATATAATTACTAATAATAAGTTTCTGGAATCTCATCCTGATTTTGTTTTTCGTTTTCTGGAGAATTACGTTATATATATTGTTTCTTTTCTTTACTGCAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCCGCAGATCTGCGACAACTCCGGCTCCACCGTCGGCATTTCAGCGCCAGGTAAAGCGCCCGCATCAGATAGCGTAAGGAGCAGAGGGCGAAGTGCGGCTGAGAAAGAAAGAAAAAGGCTGAAGAGGTAAGATTTTAGGTCTAGAATAAGGTAAAAAAGTAGCGTATAATTGCAAATTTCTTCTGTCGTATCGTATGTGGAGGAAATACTGGTAGCTGAATGCCATTTTCGTGTCCTGAAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAAGAAAGAGCAACAAATTTGGAGAAAAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAACGAGAATCAAATGCTTAGACACGTACGTCAAACTAAACCCTCTCCTTTAGCTCTATTCGTAAATATCTTTGTTCATGACGGATCTAACATAGACCCAAAAGATTCAACCTCCTCAATTTTAGTATTAATGCCCTTAGCAAGCATAGTGGTGAATATATATGTCTTGAACCTTCGCACTTAGGTTTCCCACCTTTTTGGTCGTCTCGATTATATAAAAAAAATTATTTCAATTTTTTATCCAACACAATTTTAATTTGTTTTTATTAATTCTACCCATCTATTATGTGCGCTAAATTGTAGCGTTGAGGTGTTGGTTCCTATTAAACCTAAACTTAAAATTTATGTTTAATAGATTATTATCTTTGTTGAATTTCGGCACCTTTGTCCTTTAGTTTTATAGGTATCTATCTATGGATTTGGTGTTTAGCAAAAGTCTTGTCTTTCTATTCTTATTAATATTTTTAATGTTTATTAGATCCCATGATTTCATTTTAAGGAAAAAAAAGGTTAGAATGATATAAACTTATGATACACTGAAGTTTAAAGTTTAAAGCAACTTACTTAGATTTTTGTTTAAAACGGCAGTAAAAGATGAAACCAACTAAAATTGCTTTTTTAAAACTATTAAATACAAAAACAACTGTTTGTGAATTCATCTAATTTTGATTAAACTTTTCTTACAATGATGAGATGGGCCATCATCGACTAGTTAATGTCATTTATTAGATAAATTATTGTATGGTTGGCCCACCCCTTATGTCGCCTCTTTCCCATTTGTGAAGCACTACTTAATCATGCATTTTCCAATTTAACAGTATATATAGGAAAATATTAATAAAATATAACAAAATCTTATTAAATATTTTTGAAATTTACTCTATTTTATAAATATTTTAATTTAATTTGTTATATTTTGAATTATATATATAGATTTGTATGTCATAAATTATAGTTATATTACATTTACCTTCTTGATTTTAGATGTGTTTGGATTGATTTTTTATATTTATAAATAAAAGAAAATTGTTCGGAACTTTTAATTTGTTCTTAACTTATACTTAGATAGTCTTGACTTTGAATAATACGTGAAATAACCTTTTAAATCTATTAGTTAATGATTATAATACAGATACTGAAGAACACAACAACCAACAAGAAAAGTGATAGCGATGCTACTAAATGCTAAGGGAAACGAAACCAAAATTGATATAGCGGTATGACAAGGTAAATTTACTCTAGTATTAGTATGTGTACATAATAACCATGTCGACTCGAAAGAAATTAAATGAATAATTAAGTATGGGGTAGGCTTTAATTTCATGTGTCGGGATAAATTATTTAACATGACAAATACAAATATTTGTTGCTTTTTATATAATCATTTGATGTATGATAAAGAAACTGGAAATTTCTTAGCAGTTTAGTCTATCAAACATAGTTAAAGAGGGTAACAACTTAGTCATTATTCTTCATCAATTCGATGATTTTAACTTTTCATTGATTTCTTGATCAAAGTGTATAAGAAAAATTATTAAAATTTACTAATAGTTTTTTTCTTTATTAGAGGTTAAATTGTTTCAAACTACTAAAAAGTCGATAATTATTATAAGAGGATAGTAATTGGGAGAGGTGACTTAAATAACAAAGTAAGAAATGATTGGGCTGAATAGCTACCCCATTCTAATTAATAGGAAATCAAAGAGCAAATAGTCAGTGAATTCTTTTTACTCACCCTACCCAACACAGCTTGGGAGGTCAAATGGCCCCGAAGCATATATGAACTATATTGTTGTTTATTTATTTAGTTTTATGATTAAATTGTTATAAAATTTCTAAATAGTTACCACCTCTAGTTTGGGAACTGAAGAGTCACAACTATATTGGAGGGTCAATCTCTTAGTTATATTGATTTTGAAAATTTTATTGACAATGTTGGATAACATTGTTGAGTAAGATGTGTTTTCTTTTTAGGGTTAACCGTTTGAAGCAATTGAGTTATGTTTATGTGACAGTAAAAATTGTTTATTTAATTTGTTATAAGAATAAAACTGCTTTTATTTTTCTATTTCAAGTTGACAGTTTTTTAATTTGCTTTCTCTATCTCTATTTTCTTCTTCTTCTTTTTCCCTCAAGTAGGTAATTTAATGACATGTTTTGTTCTTGCTATCTTAAGAAAAAAAATATCAAATTATTTTTTTTTATAAAGATAATTGAATTAATATTATTTTATTATTAATTATGTAAAGAAAGATGGATGCATGAATTAGGTGTAGCGTAGGCTACATCTAATACTTACCGTTTTGAAGATAATAATGTGACACTGGTGTATTTATATTGGCCTTTTTAGCAATACAATCTATCAATTATACATAAACAATGTATCAATATTGCTAGAAGACCTAATTTACGTAAATAATATATTAGCATCACAATCTATCAATAATTTCCATTGGTTTTTGGTACATCGTTGCTTATAATTTGATCATTTTAGATATAAATGTGTAGTTTGTTTATTTTCTACGTTAATAATAATCAGTTGACCTAATTTGAAATAGGTATTTGGTAATTGTTGGTGGCAGACTATTGTTAACAATAATGTTGAATTAAATGTTGAGTGTTTATATAGAAAAACTTCTCAATCTTTCCAACCTTTGAAAGTTGAAACTTTAATGAAAGACCTAACTTTAGCATGATCTCCAAAAGAGGGAAAGAAAAATAAACTCAATCAATTGGGTTAATTTCAGTTGTTGAGGATGTATATACTTGTTTTTGAATCCTAAATTAGTAGTTATATTAATTTAAATCGTATCAACTTAAAAAGAATTCTATTAATTTGAATTTTAAACTTTAAATTTTCATAAATGCATCAAACTTAAATCTTGAATTTTCATACATTTATTAATATTTAAACTTTTAACTTTCATAAGTGCGTGCGTC

mRNA sequence

CTCCTCCATTGCCTTTTAATAAGCAGAGCTTTCCAATTTTTCATCTCATATCAATCTTTTCGGTGTTGATTATTCGCCGGCGTAATGCAGGGGCGAGCCGCCGCCGCCGCCATCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCCGCAGATCTGCGACAACTCCGGCTCCACCGTCGGCATTTCAGCGCCAGGTAAAGCGCCCGCATCAGATAGCGTAAGGAGCAGAGGGCGAAGTGCGGCTGAGAAAGAAAGAAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAAGAAAGAGCAACAAATTTGGAGAAAAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAACGAGAATCAAATGCTTAGACACATACTGAAGAACACAACAACCAACAAGAAAAGTGATAGCGATGCTACTAAATGCTAAGGGAAACGAAACCAAAATTGATATAGCGGTATGACAAGGTAAATTTACTCTAGTATTAGTATGTGTACATAATAACCATGTCGACTCGAAAGAAATTAAATGAATAATTAAGTATGGGGTAGGCTTTAATTTCATGTGTCGGGATAAATTATTTAACATGACAAATACAAATATTTGTTGCTTTTTATATAATCATTTGATGTATGATAAAGAAACTGGAAATTTCTTAGCAGTTTAGTCTATCAAACATAGTTAAAGAGGGTAACAACTTAGTCATTATTCTTCATCAATTCGATGATTTTAACTTTTCATTGATTTCTTGATCAAAGTGTATAAGAAAAATTATTAAAATTTACTAATAGTTTTTTTCTTTATTAGAGGTTAAATTGTTTCAAACTACTAAAAAGTCGATAATTATTATAAGAGGATAGTAATTGGGAGAGGTGACTTAAATAACAAAGTAAGAAATGATTGGGCTGAATAGCTACCCCATTCTAATTAATAGGAAATCAAAGAGCAAATAGTCAGTGAATTCTTTTTACTCACCCTACCCAACACAGCTTGGGAGGTCAAATGGCCCCGAAGCATATATGAACTATATTGTTGTTTATTTATTTAGTTTTATGATTAAATTGTTATAAAATTTCTAAATAGTTACCACCTCTAGTTTGGGAACTGAAGAGTCACAACTATATTGGAGGGTCAATCTCTTAGTTATATTGATTTTGAAAATTTTATTGACAATGTTGGATAACATTGTTGAGTAAGATGTGTTTTCTTTTTAGGGTTAACCGTTTGAAGCAATTGAGTTATGTTTATGTGACAGTAAAAATTGTTTATTTAATTTGTTATAAGAATAAAACTGCTTTTATTTTTCTATTTCAAGTTGACAGTTTTTTAATTTGCTTTCTCTATCTCTATTTTCTTCTTCTTCTTTTTCCCTCAAGTAGGTAATTTAATGACATGTTTTGTTCTTGCTATCTTAAGAAAAAAAATATCAAATTATTTTTTTTTATAAAGATAATTGAATTAATATTATTTTATTATTAATTATGTAAAGAAAGATGGATGCATGAATTAGGTGTAGCGTAGGCTACATCTAATACTTACCGTTTTGAAGATAATAATGTGACACTGGTGTATTTATATTGGCCTTTTTAGCAATACAATCTATCAATTATACATAAACAATGTATCAATATTGCTAGAAGACCTAATTTACGTAAATAATATATTAGCATCACAATCTATCAATAATTTCCATTGGTTTTTGGTACATCGTTGCTTATAATTTGATCATTTTAGATATAAATGTGTAGTTTGTTTATTTTCTACGTTAATAATAATCAGTTGACCTAATTTGAAATAGGTATTTGGTAATTGTTGGTGGCAGACTATTGTTAACAATAATGTTGAATTAAATGTTGAGTGTTTATATAGAAAAACTTCTCAATCTTTCCAACCTTTGAAAGTTGAAACTTTAATGAAAGACCTAACTTTAGCATGATCTCCAAAAGAGGGAAAGAAAAATAAACTCAATCAATTGGGTTAATTTCAGTTGTTGAGGATGTATATACTTGTTTTTGAATCCTAAATTAGTAGTTATATTAATTTAAATCGTATCAACTTAAAAAGAATTCTATTAATTTGAATTTTAAACTTTAAATTTTCATAAATGCATCAAACTTAAATCTTGAATTTTCATACATTTATTAATATTTAAACTTTTAACTTTCATAAGTGCGTGCGTC

Coding sequence (CDS)

ATGCAGGGGCGAGCCGCCGCCGCCGCCATCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCCGCAGATCTGCGACAACTCCGGCTCCACCGTCGGCATTTCAGCGCCAGGTAAAGCGCCCGCATCAGATAGCGTAAGGAGCAGAGGGCGAAGTGCGGCTGAGAAAGAAAGAAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAAGAAAGAGCAACAAATTTGGAGAAAAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAACGAGAATCAAATGCTTAGACACATACTGAAGAACACAACAACCAACAAGAAAAGTGATAGCGATGCTACTAAATGCTAA

Protein sequence

MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISAPGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTNKKSDSDATKC

Homology

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BLAST of Cmc04g0090991 vs. NCBI nr
Match: XP_008466392.1 (PREDICTED: transcription factor HY5 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDSDATKC 158
           SELEEKLSTLQNENQMLRHILKNTTTNKKSD+DATKC
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC 157

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BLAST of Cmc04g0090991 vs. NCBI nr
Match: XP_004136344.1 (transcription factor HY5 [Cucumis sativus] >KGN60111.1 hypothetical protein Csa_001769 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 9.5e-64
Identity = 147/156 (94.23%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK+N
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDSDATK 157
           SELEEKLSTLQNENQMLRHILKNTTTNK+SD DA K
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK 156

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BLAST of Cmc04g0090991 vs. NCBI nr
Match: KAA0038802.1 (transcription factor HY5 [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 141
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

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BLAST of Cmc04g0090991 vs. NCBI nr
Match: TYK31424.1 (transcription factor HY5 [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 7.8e-58
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 141
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

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BLAST of Cmc04g0090991 vs. NCBI nr
Match: XP_022981220.1 (transcription factor HY5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 198.0 bits (502), Expect = 6.2e-47
Identity = 125/155 (80.65%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MQGR-AAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTV-GI 60
           MQ R  A A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQIC NS S   G 
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SAPGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK 120
           SA GKAPASD VRSRGRS+A+KE KRLKRLLRNRVSAQQARERKK YL +LE RA NL K
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEEKLSTLQNENQMLRHILKNTTTNKKSDSD 154
           RNSELEE LSTLQNENQMLRHILKNTTTNK+SD D
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGD 155

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BLAST of Cmc04g0090991 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 102/173 (58.96%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 1   MQGRAAAA-AISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGIS 60
           MQ +A ++ A S + SSSERSSSSA  L++KE  G ESD EEI RVP+     G  VG  
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKE--GIESD-EEIRRVPEF---GGEAVGKE 60

Query: 61  APGK------------APASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLS 120
             G+            A   +S R RGR+ AEKE KRLKRLLRNRVSAQQARERKK YLS
Sbjct: 61  TSGRESGSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLS 120

Query: 121 ELEERATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTNKK-----SDSDAT 156
           ELE R  +LE +NSELEE+LSTLQNENQMLRHILKNTT NK+     S++DA+
Sbjct: 121 ELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADAS 167

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BLAST of Cmc04g0090991 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MQGRAAAA-AISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTV--- 60
           MQ +A ++ A S + SSSERSSSSA   ++KE  G ESD +EI RVP++   +  T    
Sbjct: 1   MQEQATSSIAASSLPSSSERSSSSALHHELKE--GMESD-DEIRRVPEMGGEATGTTSAS 60

Query: 61  ---GISAPGKA-PASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEER 120
              G+SA G+A P++ + R RGRS A+KE KRLKRLLRNRVSAQQARERKK YL +LE R
Sbjct: 61  GRDGVSAAGQAQPSAGTQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEAR 120

Query: 121 ATNLEKRNSELEEKLSTLQNENQMLRHILKNTT 146
              LE +N+ELEE+LSTLQNENQMLRHILKNTT
Sbjct: 121 VKELETKNAELEERLSTLQNENQMLRHILKNTT 150

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BLAST of Cmc04g0090991 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.5e-15
Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 10  ISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISAPG------- 69
           +S  R +   SSSS+ +    E+      +EE+  VP + + +GST  +S+         
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTEE-----SDEELLMVPDM-EAAGSTCVLSSSADDGVNNP 60

Query: 70  -----KAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLE 129
                +   S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+
Sbjct: 61  ELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQ 120

Query: 130 KRNSELEEKLSTLQNENQMLRHILKNT 145
             N +LEEK+STL NEN MLR +L NT
Sbjct: 121 NNNDQLEEKISTLTNENTMLRKMLINT 141

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BLAST of Cmc04g0090991 vs. ExPASy Swiss-Prot
Match: A2VD01 (Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Xenopus laevis OX=8355 GN=creb3l2 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.8e-04
Identity = 25/61 (40.98%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 77  AAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEKLSTLQNENQM 136
           A EK  K+++R ++N++SAQ++R +KK Y+  LE+R  N    NSEL +K+  L++ N+ 
Sbjct: 295 AEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKRVENSSSENSELRKKVEVLESTNRT 354

Query: 137 L 138
           L
Sbjct: 355 L 355

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BLAST of Cmc04g0090991 vs. ExPASy Swiss-Prot
Match: Q1XGE2 (Transcriptional activator hacA OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=hacA PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.8e-04
Identity = 27/67 (40.30%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 71  RSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEKLSTL 130
           R R ++  EKE++R++R+LRNR +AQ +RERK++ + +LE     +E++N  L ++LS +
Sbjct: 73  RKRAKTEDEKEQRRIERVLRNRAAAQTSRERKRLEMEKLENEKIQMEQQNQFLLQRLSQM 132

Query: 131 QNENQML 138
           + EN  L
Sbjct: 133 EAENNRL 139

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BLAST of Cmc04g0090991 vs. ExPASy TrEMBL
Match: A0A1S3CSG2 (transcription factor HY5 OS=Cucumis melo OX=3656 GN=LOC103503812 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDSDATKC 158
           SELEEKLSTLQNENQMLRHILKNTTTNKKSD+DATKC
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDTDATKC 157

[Close]

BLAST of Cmc04g0090991 vs. ExPASy TrEMBL
Match: A0A0A0LJB7 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878800 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.6e-64
Identity = 147/156 (94.23%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK+N
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKN 120

Query: 121 SELEEKLSTLQNENQMLRHILKNTTTNKKSDSDATK 157
           SELEEKLSTLQNENQMLRHILKNTTTNK+SD DA K
Sbjct: 121 SELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK 156

[Close]

BLAST of Cmc04g0090991 vs. ExPASy TrEMBL
Match: A0A5A7T5P8 (Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003580 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 141
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

[Close]

BLAST of Cmc04g0090991 vs. ExPASy TrEMBL
Match: A0A5D3E623 (Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007340 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.8e-58
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISA 60
           MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISA
Sbjct: 1   MQGRAAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISA 60

Query: 61  PGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120
           PGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN
Sbjct: 61  PGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRN 120

Query: 121 SELEEKLSTLQNENQMLRHI 141
           SELEEKLSTLQNENQMLRH+
Sbjct: 121 SELEEKLSTLQNENQMLRHV 140

[Close]

BLAST of Cmc04g0090991 vs. ExPASy TrEMBL
Match: A0A6J1IYV9 (transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.0e-47
Identity = 125/155 (80.65%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 1   MQGR-AAAAAISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTV-GI 60
           MQ R  A A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQIC NS S   G 
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SAPGKAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEK 120
           SA GKAPASD VRSRGRS+A+KE KRLKRLLRNRVSAQQARERKK YL +LE RA NL K
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEEKLSTLQNENQMLRHILKNTTTNKKSDSD 154
           RNSELEE LSTLQNENQMLRHILKNTTTNK+SD D
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGD 155

[Close]

BLAST of Cmc04g0090991 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 102/173 (58.96%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 1   MQGRAAAA-AISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGIS 60
           MQ +A ++ A S + SSSERSSSSA  L++KE  G ESD EEI RVP+     G  VG  
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKE--GIESD-EEIRRVPEF---GGEAVGKE 60

Query: 61  APGK------------APASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLS 120
             G+            A   +S R RGR+ AEKE KRLKRLLRNRVSAQQARERKK YLS
Sbjct: 61  TSGRESGSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLS 120

Query: 121 ELEERATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTNKK-----SDSDAT 156
           ELE R  +LE +NSELEE+LSTLQNENQMLRHILKNTT NK+     S++DA+
Sbjct: 121 ELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADAS 167

[Close]

BLAST of Cmc04g0090991 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 67  SDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEK 126
           S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK
Sbjct: 50  STAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEK 109

Query: 127 LSTLQNENQMLRHILKNT 145
           +STL NEN MLR +L NT
Sbjct: 110 ISTLTNENTMLRKMLINT 127

[Close]

BLAST of Cmc04g0090991 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 67  SDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEK 126
           S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK
Sbjct: 35  STAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEK 94

Query: 127 LSTLQNENQMLRHILKNT 145
           +STL NEN MLR +L NT
Sbjct: 95  ISTLTNENTMLRKMLINT 112

[Close]

BLAST of Cmc04g0090991 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 67  SDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKRNSELEEK 126
           S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK
Sbjct: 49  STAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEK 108

Query: 127 LSTLQNENQMLRHILKNT 145
           +STL NEN MLR +L NT
Sbjct: 109 ISTLTNENTMLRKMLINT 126

[Close]

BLAST of Cmc04g0090991 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog )

HSP 1 Score: 82.0 bits (201), Expect = 4.6e-16
Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 10  ISRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICDNSGSTVGISAPG------- 69
           +S  R +   SSSS+ +    E+      +EE+  VP + + +GST  +S+         
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTEE-----SDEELLMVPDM-EAAGSTCVLSSSADDGVNNP 60

Query: 70  -----KAPASDSVRSRGRSAAEKERKRLKRLLRNRVSAQQARERKKVYLSELEERATNLE 129
                +   S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+
Sbjct: 61  ELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQ 120

Query: 130 KRNSELEEKLSTLQNENQMLRHILKNT 145
             N +LEEK+STL NEN MLR +L NT
Sbjct: 121 NNNDQLEEKISTLTNENTMLRKMLINT 141

The following BLAST results are available for this feature:

BLAST of Cmc04g0090991 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466392.1	4.1e-67	98.09	PREDICTED: transcription factor HY5 [Cucumis melo]	[more]
XP_004136344.1	9.5e-64	94.23	transcription factor HY5 [Cucumis sativus] >KGN60111.1 hypothetical protein Csa_...	[more]
KAA0038802.1	2.4e-59	99.29	transcription factor HY5 [Cucumis melo var. makuwa]	[more]
TYK31424.1	7.8e-58	97.86	transcription factor HY5 [Cucumis melo var. makuwa]	[more]
XP_022981220.1	6.2e-47	80.65	transcription factor HY5-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cmc04g0090991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24646	1.9e-30	58.96	Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1	[more]
Q9SM50	1.3e-28	60.78	Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1	[more]
Q8W191	6.5e-15	44.90	Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1	[more]
A2VD01	8.8e-04	40.98	Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Xenopus laevis...	[more]
Q1XGE2	8.8e-04	40.30	Transcriptional activator hacA OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40...	[more]

BLAST of Cmc04g0090991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSG2	2.0e-67	98.09	transcription factor HY5 OS=Cucumis melo OX=3656 GN=LOC103503812 PE=3 SV=1	[more]
A0A0A0LJB7	4.6e-64	94.23	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878800 PE=3 S...	[more]
A0A5A7T5P8	1.2e-59	99.29	Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3E623	3.8e-58	97.86	Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1IYV9	3.0e-47	80.65	transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of Cmc04g0090991 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11260.1	1.3e-31	58.96	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT3G17609.1	1.2e-16	65.38	HY5-homolog	[more]
AT3G17609.3	1.2e-16	65.38	HY5-homolog	[more]
AT3G17609.4	1.2e-16	65.38	HY5-homolog	[more]
AT3G17609.2	4.6e-16	44.90	HY5-homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..140
None	No IPR available	PRINTS	PR00041	LEUZIPPRCREB	coord: 96..116 score: 38.73 coord: 78..94 score: 45.1 coord: 116..133 score: 40.37
None	No IPR available	GENE3D	1.20.5.490	Single helix bin	coord: 102..143 e-value: 9.6E-19 score: 69.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	PANTHER	PTHR46714:SF6	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..150
None	No IPR available	CDD	cd14704	bZIP_HY5-like	coord: 84..135 e-value: 2.50327E-17 score: 69.1402
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 83..141
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 79..143 e-value: 2.0E-12 score: 57.3
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 79..140 e-value: 3.6E-12 score: 46.2
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 86..101
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 81..144 score: 12.323049
IPR044280	Transcriptional activator Hac1/HY5	PANTHER	PTHR46714	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0090991.1	Cmc04g0090991.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0010017	red or far-red light signaling pathway
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0010218	response to far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0003700	DNA-binding transcription factor activity