
Cmc04g0088511 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCTTTTTGGCTTCCATTCCATCTGTGAATGACAAGTAAAAGATCTTCCCCTCCTTCCAAGATTTTTATTCCTTCTCAATAAAAGCTGATCTCGATCCATCCATCCTCTTACTTATTTTGTTTTTGAAATTTTAATCAATTCCTTTTTTCCTTCCTTTGCTTATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCATCATCAACAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCAATTCCTCATCATCAACAATCTCTTCCTAATTTTCATAATTACCAAAATAATAATCATCATCATCATCACCTCCTCCCTTCTTTCTATGATTTTCCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAGAAACCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGAATCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCTAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTTACTGGAATCCCTTCCCCGCCCTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGCAATAACTCAACGGCTACGCGGCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGATGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTTAGAGATGGATCACAATGTTGTTCATGGGAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACCACTGCAGCAACAGCAACAGCAACCGCAGCAACAGCAGCGACAGTGACAGCAAATTCCAACAATAACAATAATAATAATAATGCAGCAAATTGTAAGTTTTAAATTTTATGGGGTCGTTGTTCACTTTGTTCTTTCATCGAATAATTTGGGGAATATTTGTTTCAACTACCAAGAGGGGTAAAAGTACAGTAGTAGATTAAAGAGAGAGAAAAAAAAAAGGGGAAATGGGTAAAATTTTTCTTTTAGGTAATCAAAATGGCAATGATGATGATACTGATGATTTTAATGATGATTGTGGAGATTCTAGTGGTGGTGGTAGTGGTGGTGGTGAGTTGATGATGGAAAATAAGAACCCTCAAGCTAAGCAACAACCCCTCTTCCCCCATAGACCCATCATCATAAAACCCTTTTGGCAGTTTATATACAAAGGAATATTATCATTATTTTTTGAGTTCAAAATATCAATTTATACCACAAGTCTATTCATTTCAACCCCAACTTTCATAAATATATCAATCTAAAATCTTCAAATTTCGTTAAACATAGTATACAAAATGTTTAAGTTGATACAAACAATTAAATTTAAAAGATGATTTTAAAGATTTCAGGTTAATTAATGCTTTGTTTAGAGCATAAAATGATGAAAATTTAGGGTTTATAACGGTGGGTGTGTACTGTTTGGATTTTAGTGGATTCAGTTTACAATATAATGGCGTAAAGACGAAGGTGGAAGACATTTTCCAACGCCGTAGCAGCAGCTGTGTTTTGGCAATTGCCGCAGTCTATGGCGGTTCGAAATTTTCCGGTCAGAAATGGGGCCCTCTCTCTCTCTACTACCGGTGATTTTGAAGGGAAAGAAAATTTATATATACATATTATATGAAGCTATATGCTTGATGTAGGCTATTCTCTATTCCTACCCTAATATATATATATGTGATGTTCATATTCTCTTTACCTGTTGTTGTTATGTTATTAGTCAAATATGTGTAAATATCTCTCTCTTTAATTTATCTCTTATTTATTTATTTATTTATTATGATAC TTCCTTTTTGGCTTCCATTCCATCTGTGAATGACAAGTAAAAGATCTTCCCCTCCTTCCAAGATTTTTATTCCTTCTCAATAAAAGCTGATCTCGATCCATCCATCCTCTTACTTATTTTGTTTTTGAAATTTTAATCAATTCCTTTTTTCCTTCCTTTGCTTATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCATCATCAACAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCAATTCCTCATCATCAACAATCTCTTCCTAATTTTCATAATTACCAAAATAATAATCATCATCATCATCACCTCCTCCCTTCTTTCTATGATTTTCCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAGAAACCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGAATCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCTAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTTACTGGAATCCCTTCCCCGCCCTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGCAATAACTCAACGGCTACGCGGCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGATGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTTAGAGATGGATCACAATGTTGTTCATGGGAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACCACTGCAGCAACAGCAACAGCAACCGCAGCAACAGCAGCGACAGTGACAGCAAATTCCAACAATAACAATAATAATAATAATGCAGCAAATTTGGATTCAGTTTACAATATAATGGCGTAAAGACGAAGGTGGAAGACATTTTCCAACGCCGTAGCAGCAGCTGTGTTTTGGCAATTGCCGCAGTCTATGGCGGTTCGAAATTTTCCGGTCAGAAATGGGGCCCTCTCTCTCTCTACTACCGGTGATTTTGAAGGGAAAGAAAATTTATATATACATATTATATGAAGCTATATGCTTGATGTAGGCTATTCTCTATTCCTACCCTAATATATATATATGTGATGTTCATATTCTCTTTACCTGTTGTTGTTATGTTATTAGTCAAATATGTGTAAATATCTCTCTCTTTAATTTATCTCTTATTTATTTATTTATTTATTATGATAC ATGGATTCCGGTAGCGGAAGTTTGCAATCTTCTAGTGGTGGTGATGAAGAATATGATTCTCATCATCATCATCATCAACAACAACCTCAACTAGTTTTTCCTCCATCCCCACTTTTCTTCAATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCTTGCTTGTTCTTCTTCTTCAATTCCTCATCATCAACAATCTCTTCCTAATTTTCATAATTACCAAAATAATAATCATCATCATCATCACCTCCTCCCTTCTTTCTATGATTTTCCTTCCTCTAATTACAATTTCAACCCTGATTCTTCTTCCAATTCCTTTGTTAATCTCGACGTCTTAAGATCTGGAGAACCCACCCATTTCAGAAACCCCCCCGACGGATCTACCCAAAACCAAATCCCAACGAATCGTTCAACCCCATCAACATCTTCCGGCGCTTTACATCCTAAAGTCACTACCAAGAAACGAACTAGAGCTTCACGTCGAGCCCCCACCACCGTTCTCACAACAGACACTACTAATTTCAGAGCAATGGTACAAGAGTTTACTGGAATCCCTTCCCCGCCCTTTACTTCCGGTGGGTCATCCTATTCCCGGCGATTTGATCTGTTTGGGTTGGTTCGAACAACAAGCAATAACTCAACGGCTACGCGGCTAGAAGATTCTGGATTGGGAGTGGGTTCTTACCCTTCTCGATCAAAGGATGACAATGTTGGTGTTGGTGGGGTTTTTTCGTTTCAATCGGTATCTTCAGGGCATGATTTTAATTCTAATTCCAAGCAAGTTAGAGAAAATTTAGAGATGGATCACAATGTTGTTCATGGGAGTAATAGGCTGGTACAAAATGATGAAACCTGGAGAAGCAACCGCGGCGGTAGTACCACTGCAGCAACAGCAACAGCAACCGCAGCAACAGCAGCGACAGTGACAGCAAATTCCAACAATAACAATAATAATAATAATGCAGCAAATTTGGATTCAGTTTACAATATAATGGCGTAA MDSGSGSLQSSSGGDEEYDSHHHHHQQQPQLVFPPSPLFFNLPSSSSSSSSSSSSSSSLLACSSSSIPHHQQSLPNFHNYQNNNHHHHHLLPSFYDFPSSNYNFNPDSSSNSFVNLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVGSYPSRSKDDNVGVGGVFSFQSVSSGHDFNSNSKQVRENLEMDHNVVHGSNRLVQNDETWRSNRGGSTTAATATATAATAATVTANSNNNNNNNNAANLDSVYNIMA Homology
BLAST of Cmc04g0088511 vs. NCBI nr
Match: XP_016903526.1 (PREDICTED: anaphase-promoting complex subunit cdh1-like [Cucumis melo]) HSP 1 Score: 612.1 bits (1577), Expect = 3.0e-171 Identity = 335/346 (96.82%), Postives = 336/346 (97.11%), Query Frame = 0
BLAST of Cmc04g0088511 vs. NCBI nr
Match: XP_011652626.1 (uncharacterized protein DDB_G0271670 [Cucumis sativus] >KAE8651421.1 hypothetical protein Csa_001203 [Cucumis sativus]) HSP 1 Score: 556.2 bits (1432), Expect = 1.9e-154 Identity = 318/344 (92.44%), Postives = 322/344 (93.60%), Query Frame = 0
BLAST of Cmc04g0088511 vs. NCBI nr
Match: KAA0038603.1 (anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa] >TYK31202.1 anaphase-promoting complex subunit cdh1-like [Cucumis melo var. makuwa]) HSP 1 Score: 520.0 bits (1338), Expect = 1.5e-143 Identity = 283/312 (90.71%), Postives = 289/312 (92.63%), Query Frame = 0
BLAST of Cmc04g0088511 vs. NCBI nr
Match: XP_038898813.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida]) HSP 1 Score: 368.2 bits (944), Expect = 7.4e-98 Identity = 260/365 (71.23%), Postives = 276/365 (75.62%), Query Frame = 0
BLAST of Cmc04g0088511 vs. NCBI nr
Match: XP_023524775.1 (probable serine/threonine-protein kinase MARK-A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.4 bits (516), Expect = 3.2e-48 Identity = 174/376 (46.28%), Postives = 208/376 (55.32%), Query Frame = 0
BLAST of Cmc04g0088511 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.7e-04 Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Cmc04g0088511 vs. ExPASy TrEMBL
Match: A0A1S4E5L0 (anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC103503584 PE=4 SV=1) HSP 1 Score: 612.1 bits (1577), Expect = 1.4e-171 Identity = 335/346 (96.82%), Postives = 336/346 (97.11%), Query Frame = 0
BLAST of Cmc04g0088511 vs. ExPASy TrEMBL
Match: A0A5D3E5M3 (Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004870 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 7.4e-144 Identity = 283/312 (90.71%), Postives = 289/312 (92.63%), Query Frame = 0
BLAST of Cmc04g0088511 vs. ExPASy TrEMBL
Match: A0A0A0LJY7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 2.4e-110 Identity = 229/249 (91.97%), Postives = 232/249 (93.17%), Query Frame = 0
BLAST of Cmc04g0088511 vs. ExPASy TrEMBL
Match: A0A6J1FJ60 (mucin-5AC-like OS=Cucurbita moschata OX=3662 GN=LOC111445950 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46 Identity = 172/386 (44.56%), Postives = 206/386 (53.37%), Query Frame = 0
BLAST of Cmc04g0088511 vs. ExPASy TrEMBL
Match: A0A6J1IVA8 (mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45 Identity = 177/399 (44.36%), Postives = 213/399 (53.38%), Query Frame = 0
BLAST of Cmc04g0088511 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein ) HSP 1 Score: 62.8 bits (151), Expect = 6.2e-10 Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 0
BLAST of Cmc04g0088511 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09 Identity = 75/197 (38.07%), Postives = 95/197 (48.22%), Query Frame = 0
BLAST of Cmc04g0088511 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein ) HSP 1 Score: 53.5 bits (127), Expect = 3.8e-07 Identity = 64/187 (34.22%), Postives = 94/187 (50.27%), Query Frame = 0
BLAST of Cmc04g0088511 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.9e-06 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Cmc04g0088511 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein ) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05 Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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