
Cmc04g0088151 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGCGATAAGACCGAAGCAAAGAAGAAAATGAAAGCCAAAATTTATAAAGGAAAGAAGGAGATGAGTTCCTTATACCCAACGCATCTTTTCCCATTTGCTTCTGCTTCGGACCTTTTTGCTTCGGTTTAGACTTTTTTCAGATAAGAATCACTTCTCTCTCCCCCAAATTTCTTTCAGGAACCCTTCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTCCTTCAATCTGGCTATTCAACACCACCATTCAAATCTCCCTCAAATCAATCCAACTCTCATGGTAATTCCACTTCTGGGTTCTTCACTAAGTTCTCAAACCATTCATTCTTATTAATCCATGATTTTGATTTTTTTTTTTTCTGTTTGTTTCAAAAACAGGGTCTTGCTGGAAGTCCTGTAGATGAAGATAACAGATGGCCTCCATGGCTTAAACCTTTACTCCGTGAAAGCTTCTTTGTTCAATGCAAGTTCCATGCTGATTCTCATAAAAGCGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCACAAAGACCATCGTGCTATTCAGGTCTATTTCTTTGAGGTTCCGTTGAATTTCCAATTGCTCTATTTTATTTTTTCTGATTGGCTTTGTGTTTTTTTTTTTTTTTGTACAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTAGACATAACCGGAGTTCAAACCTACATTATAAACAGCGCGAGAGTTGTTTTCTTGAATGAGCGGCCACAGCCTAGGCCTGGGAAAGGGGTAACGAACACGTGTGAAGTTTGTGAACGGAGTCTTCTCGATTCATTTCGATTCTGTTCTCTTGGATGTAAGGTAATGTAATGAAATCGACTTTTTTATTCCCTTTCTTCTGGGTTTCTGTAGTGATATTTTTTTTTTTGATGAATGTGGAAGAATTGGGAGAAATTGAATTGTGGGGGTTTTGTTGTAGATTGTTGGAACATCGAAGAATTATGAGAAGAAACGGAGAGTGATGGGGTCGGATTCAGAGGATTCGTCGTATAGTAGTAATAGCAGTCGAGGGAGAATAATGAAGAACAGCAATAAGAACAGAGTTGTTCAGAGTTTTACACCGTCGACGCCACCGCCAACGCTGGTTAGTTACAGAACAGCTAAACGAAGAAAGGGAATTCCTCACAGAGCTCCAATGGGAGGACTTATTATCGAATACTGAAAAAGGAAAGAAAAAAAAAAAACCTTTTTTCTTTTTTCACTTCATAAAGATTACCCTTTTCTCTCTAATTTGAATTACAGAGATATGATGATAATGTAGTTTTCAAACGAGAGCTCCCATGGCGTTAGAAGGAGGAGCTTTGATTATTGTCTTGTTAAAAGTTCAATGTGAATATTGGGGTGGGAAAAGAGAAATGGAGGATGAGGAAGAATGGGTGAATGTGGAAATAGTGTAAAGAGATGGTGGACTTGGGTGAAAATTAAAAAAAAAAAAAAAAAAAAAAAAACGAAGGATTTGACTAGTGTTCTATAGATGATAATTATATGAAATAGGACGCTTTATACGTGAGTTTTGGTTTATAGATGTGAATATTGTTTCTTTTTCTTTTTTTTTTTCTTATATATATATATATTATATGAATATAGTTCTCCTTCCTTGATTGTAATTTTAGAAATATGTTTATACAAGGAATGAAATAAAAAGAAAAATG TATGCGATAAGACCGAAGCAAAGAAGAAAATGAAAGCCAAAATTTATAAAGGAAAGAAGGAGATGAGTTCCTTATACCCAACGCATCTTTTCCCATTTGCTTCTGCTTCGGACCTTTTTGCTTCGGTTTAGACTTTTTTCAGATAAGAATCACTTCTCTCTCCCCCAAATTTCTTTCAGGAACCCTTCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTCCTTCAATCTGGCTATTCAACACCACCATTCAAATCTCCCTCAAATCAATCCAACTCTCATGGGTCTTGCTGGAAGTCCTGTAGATGAAGATAACAGATGGCCTCCATGGCTTAAACCTTTACTCCGTGAAAGCTTCTTTGTTCAATGCAAGTTCCATGCTGATTCTCATAAAAGCGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCACAAAGACCATCGTGCTATTCAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTAGACATAACCGGAGTTCAAACCTACATTATAAACAGCGCGAGAGTTGTTTTCTTGAATGAGCGGCCACAGCCTAGGCCTGGGAAAGGGGTAACGAACACGTGTGAAGTTTGTGAACGGAGTCTTCTCGATTCATTTCGATTCTGTTCTCTTGGATGTAAGATTGTTGGAACATCGAAGAATTATGAGAAGAAACGGAGAGTGATGGGGTCGGATTCAGAGGATTCGTCGTATAGTAGTAATAGCAGTCGAGGGAGAATAATGAAGAACAGCAATAAGAACAGAGTTGTTCAGAGTTTTACACCGTCGACGCCACCGCCAACGCTGGTTAGTTACAGAACAGCTAAACGAAGAAAGGGAATTCCTCACAGAGCTCCAATGGGAGGACTTATTATCGAATACTGAAAAAGGAAAGAAAAAAAAAAAACCTTTTTTCTTTTTTCACTTCATAAAGATTACCCTTTTCTCTCTAATTTGAATTACAGAGATATGATGATAATGTAGTTTTCAAACGAGAGCTCCCATGGCGTTAGAAGGAGGAGCTTTGATTATTGTCTTGTTAAAAGTTCAATGTGAATATTGGGGTGGGAAAAGAGAAATGGAGGATGAGGAAGAATGGGTGAATGTGGAAATAGTGTAAAGAGATGGTGGACTTGGGTGAAAATTAAAAAAAAAAAAAAAAAAAAAAAAACGAAGGATTTGACTAGTGTTCTATAGATGATAATTATATGAAATAGGACGCTTTATACGTGAGTTTTGGTTTATAGATGTGAATATTGTTTCTTTTTCTTTTTTTTTTTCTTATATATATATATATTATATGAATATAGTTCTCCTTCCTTGATTGTAATTTTAGAAATATGTTTATACAAGGAATGAAATAAAAAGAAAAATG ATGGGTCTTGCTGGAAGTCCTGTAGATGAAGATAACAGATGGCCTCCATGGCTTAAACCTTTACTCCGTGAAAGCTTCTTTGTTCAATGCAAGTTCCATGCTGATTCTCATAAAAGCGAATGTAATATGTATTGTTTGGATTGCATGAATGGCGCTCTCTGTTCTCTCTGTCTCGCTTTTCACAAAGACCATCGTGCTATTCAGATTAGAAGATCTTCATATCATGATGTGATAAGGGTATCTGAGATTCAGAAAGTTCTAGACATAACCGGAGTTCAAACCTACATTATAAACAGCGCGAGAGTTGTTTTCTTGAATGAGCGGCCACAGCCTAGGCCTGGGAAAGGGGTAACGAACACGTGTGAAGTTTGTGAACGGAGTCTTCTCGATTCATTTCGATTCTGTTCTCTTGGATGTAAGATTGTTGGAACATCGAAGAATTATGAGAAGAAACGGAGAGTGATGGGGTCGGATTCAGAGGATTCGTCGTATAGTAGTAATAGCAGTCGAGGGAGAATAATGAAGAACAGCAATAAGAACAGAGTTGTTCAGAGTTTTACACCGTCGACGCCACCGCCAACGCTGGTTAGTTACAGAACAGCTAAACGAAGAAAGGGAATTCCTCACAGAGCTCCAATGGGAGGACTTATTATCGAATACTGA MGLAGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMGSDSEDSSYSSNSSRGRIMKNSNKNRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY Homology
BLAST of Cmc04g0088151 vs. NCBI nr
Match: XP_004136189.1 (uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED: uncharacterized protein LOC103503550 [Cucumis melo] >KAE8651437.1 hypothetical protein Csa_000726 [Cucumis sativus] >TYK31172.1 putative zinc-binding protein [Cucumis melo var. makuwa]) HSP 1 Score: 454.9 bits (1169), Expect = 3.9e-124 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Cmc04g0088151 vs. NCBI nr
Match: XP_038888735.1 (uncharacterized protein LOC120078532 [Benincasa hispida]) HSP 1 Score: 433.7 bits (1114), Expect = 9.4e-118 Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0
BLAST of Cmc04g0088151 vs. NCBI nr
Match: XP_022995236.1 (uncharacterized protein LOC111490843 [Cucurbita maxima]) HSP 1 Score: 410.6 bits (1054), Expect = 8.5e-111 Identity = 201/218 (92.20%), Postives = 208/218 (95.41%), Query Frame = 0
BLAST of Cmc04g0088151 vs. NCBI nr
Match: XP_022159845.1 (uncharacterized protein LOC111026143, partial [Momordica charantia]) HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110 Identity = 197/214 (92.06%), Postives = 207/214 (96.73%), Query Frame = 0
BLAST of Cmc04g0088151 vs. NCBI nr
Match: XP_022930997.1 (uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothetical protein SDJN03_03571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036196.1 hypothetical protein SDJN02_02997 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110 Identity = 202/218 (92.66%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.7e-32 Identity = 64/134 (47.76%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy Swiss-Prot
Match: P0CB19 (Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 8.5e-05 Identity = 38/135 (28.15%), Postives = 62/135 (45.93%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy TrEMBL
Match: A0A5D3E5J1 (Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004540 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 1.9e-124 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy TrEMBL
Match: A0A1S3CQ58 (uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 1.9e-124 Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy TrEMBL
Match: A0A6J1K1F4 (uncharacterized protein LOC111490843 OS=Cucurbita maxima OX=3661 GN=LOC111490843 PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 4.1e-111 Identity = 201/218 (92.20%), Postives = 208/218 (95.41%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy TrEMBL
Match: A0A6J1DZX6 (uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026143 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.4e-111 Identity = 197/214 (92.06%), Postives = 207/214 (96.73%), Query Frame = 0
BLAST of Cmc04g0088151 vs. ExPASy TrEMBL
Match: A0A6J1ES91 (uncharacterized protein LOC111437323 OS=Cucurbita moschata OX=3662 GN=LOC111437323 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.4e-111 Identity = 202/218 (92.66%), Postives = 207/218 (94.95%), Query Frame = 0
BLAST of Cmc04g0088151 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 317.4 bits (812), Expect = 9.1e-87 Identity = 161/216 (74.54%), Postives = 177/216 (81.94%), Query Frame = 0
BLAST of Cmc04g0088151 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein ) HSP 1 Score: 308.9 bits (790), Expect = 3.2e-84 Identity = 153/213 (71.83%), Postives = 174/213 (81.69%), Query Frame = 0
BLAST of Cmc04g0088151 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.5e-68 Identity = 135/178 (75.84%), Postives = 147/178 (82.58%), Query Frame = 0
BLAST of Cmc04g0088151 vs. TAIR 10
Match: AT4G17900.2 (PLATZ transcription factor family protein ) HSP 1 Score: 231.9 bits (590), Expect = 5.0e-61 Identity = 122/174 (70.11%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Cmc04g0088151 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-60 Identity = 118/238 (49.58%), Postives = 152/238 (63.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|