Cmc04g0087171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0087171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ras-related protein Rab-1A
Location	CMiso1.1chr04: 188044 .. 191439 (-)
RNA-Seq Expression	Cmc04g0087171
Synteny	Cmc04g0087171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCCTCTCCCCTTCTTCTCATTTCTTCGATTTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCCTCTTCTCTTCTCCGGCGACGTATCTTCCTCCGGTCAAGCTTTCGCCGGCAGCTCCTCTCATCGCATCGCATCGATCTCTTCTCCTATTCTTAACTTCCTCATCTAATTATAGCCATGAATCCTGAATAGTAAGCTCGATTTCTTCTTTTTCGTTGTCTTTTTTTTTTTTTTTTTTTTTACGCTTTCGTTTTCTTTGAGTTGAATTTTTCTATTGGAAGCCCTTGTTTTGTTGTCGTTTTTCCTGAATTGTGTTGGATCTGGTCGATGCGGAAGATGGAACTTTCTTTTTCAGAAAAATGTTTTTGTGTTGGTTTGTTTAATTAATCGGGGATTTTGAGATTGTGATTCTGTCTGTTATGATTTGGTCGAAATCTGGGTGATCCATTTGAGATCTCAATTTATTTGTTGACCCTTTTAATTTCATGTTTCTTTTCTGAATGATTGAAGGTGTGTGAATGTGAATTTGGTTTATTTTTATGATCCGCTTGTATTATGAGCTTGAATTTCTGAAGAGTCCTTTAATTCGTCTGGAGTTATTTGGTCCTTTAAATTTAATTGCGCGGTTCTATATAATATTCGAGTCCTCGAGGATTTTTTTTTTTCGCTGTAGGAGTCGGTAATCGAGTTGTGATATTAACTTGTTCGTTCTTCTTGTATCTGCAGCGACTATTTGTTTAAGCTTCTTCTTATCGGAGACTCGGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGTAAGTTGTCAGGATCGATTCTCTCCCCATAATTATTTTTCTCCCCAACTTTTTTCGACCTTTTCTTTTTATTATTTTGCTGTTGGCTGTAGAGATAGTTGGTGTAGCTTTAGTTAATACATATATATTCGCCATACCGACTTAGTAAGGAATAATTTCTGTGGCAAATATGCCTACTTCTACGCTAGAGAGTATACGTTCTTTATTGAGTTGCATCCACAGTCCGTCTTTTATAGAAATGTGGAAACTTTTCCAGTAGTTGACACCTCATCATTTGTTTCCCCCCTTTTTGCATATCCAACATAATTTCATTGTTCATTTTCTTCTGAGGTGGCCATAGAGATTGTTCATGCTGGACAGTGTATATATATAAGTTACGCGGAATGATTTTCTAAACAACTGCTATTTGTTAATGTTATCACTACTAAATAAGTTGTTCACAGATTTATCATCTTTATATTTTACAAAATTCTCGTTTTGTGTAATAGTAAATCCCCTTACTTTTCTATTTGGTTGGGAATTTCCAGTCACTGCTGATTGGCATTTATGATCTATTGAGTTCGGTGGAAGGCATTTGTGGATTAGGTGTATCTGAAATTCCTTGTTCCTTAACTAATTCCTTCTGTTTTTCAAATCAGGATGATTCGTATCTGGATAGCTACATTAGCACTATCGGAGTGGACTTTGTAAGCTTCTACCACATATTTGGTTTTCTTTACTAATTACTACAACATGAAGTTTCTCAGCTCTGATCCTTGAAATACATTATTACTTGTAGAAAATTCGTACTGTGGAACAGGATGGAAAGACAATTAAACTTCAAATTGTAAGTTTCGGTTTTTCAGTTGTTCTTGCTTTAATCTAAGCCTAGAGCATTTGTTACTCAAGCGACTTAAAATTCTAATCTGGAAGCCCGCTATTCTTCTGTCGGTTAAATAAAATCTAACTGTTAATCGTTCGGGGGGAGAGAGAGAGAGAGCGAGCGAGAGAGAGAAGGGGGTGTCAAATCTAATCGAAAACACGCAATTATTCAGATTTTATTAATATTGTTTGTTTAAGAAGCTTTCAGTGGTTTTTGGTCTGTGCTGTTAATTGGTAATTTTCACCATCAACTGTAGTGGGACACTGCCGGTCAAGAACGTTTCAGAACAATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATTGTAATTGCACATTCTTGTTGCTATTCATTTTCTTTTCCTGCCCTTTCCAATCTTCTAAAAGTGAAGTTTGCCCCTACATTGTTCTGCCATGTAGGTTGTGTATGACGTTACAGATCAGGAGAGCTTCAATAATGTTAAGCAATGGTTGAATGAAATAGACCGATATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGTAATAAATGTGATCTCACTGCAAATAAGGTCGTTTCTTATGAGACAGCCAAGGTAGGAATCTTACATAGGCATCTTCTATTAAAGCATGTATATGAATCTCAAGACTAAAATCCGTAACAATAATTTTCCAAAGGCCTTTGCTGATGAAATTGGGATTCCATTCATGGAAACAAGTGCTAAAAGCGCCACCAATGTGGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGTATGAATACTAGCAACTGTTCCGATTCTTCCATCTAATTTATCAGTCTCACTGTTCTATTTACCGTGGCCGGGTGGTGACTGCCTACGAGCTTACTCTCTTTCCCCTTTTTTTTTTTTTTAATTATTATTATAATATTCATGAGTGTCTTAGCTAGCTTATGAATATTTTACAGATACTTTTCTAGTCATCCATAACCCATCATGGTTTGAATCCGTTTCTTATATGACTTTCACTTTTTTCATGGGCACCTATGATCACTAAACTAAGCTGGCCTGATTAGTTCGATCCAAGCTTGGATAAGCCCAGCTTCATATCCACTAGGACCTTTCACTAGTTATCATAGACAAGTAGAAAATGGGGTGTGGTGAACCACTCCTGAGGTCTTGACGACTTCTGAGTTCTACCTCCATTCTTTACTTCAACAACAGTAGCTCCGTTGGACCTTCAGGCAGCTACATTCTTTAGCTCGTCTCTTATTTGTTTGTCCCTGCAATGGCGCAATCATGTTCCTTTCTTTACTTGATTTGTTGTTTTGGGTTCATTTTTATAGGATGGCAACACAACCAATGAACAACGCCAGGCCGCCGACAGTGAACATTCGAGGACAACCTGTGAATCAGAAATCTGGTTGCTGCTCATCTTAAAGATGGATGCCTCTTATCGAATGATTGACTGATGATGGTGGTGATGTTTATGTATGGACCGTGACATGTAAAACTAGTTGTCTCTCTCCCTGTCCCTGTCTCTGTTGCTTTTCGTATGGAAAGATTCGTCCGTCATGATTTGCCTTTTATTCTATGTCTTTTGTCGTCAGACCTTTGTTAACTCTTCCATTCTTTCCAATATATTTGTTTCTGGATCAACATTATTCAGCTGTAAAATTTAGATATCAATGACCAGTAGAGTATTTGCTTCATTTTCTTTATTATTCATTCATCCATTCCTAATAATAAATCTCATTCTTATTT

mRNA sequence

GCCCCTCTCCCCTTCTTCTCATTTCTTCGATTTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCCTCTTCTCTTCTCCGGCGACGTATCTTCCTCCGGTCAAGCTTTCGCCGGCAGCTCCTCTCATCGCATCGCATCGATCTCTTCTCCTATTCTTAACTTCCTCATCTAATTATAGCCATGAATCCTGAATACGACTATTTGTTTAAGCTTCTTCTTATCGGAGACTCGGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGATGATTCGTATCTGGATAGCTACATTAGCACTATCGGAGTGGACTTTAAAATTCGTACTGTGGAACAGGATGGAAAGACAATTAAACTTCAAATTTGGGACACTGCCGGTCAAGAACGTTTCAGAACAATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATTGTTGTGTATGACGTTACAGATCAGGAGAGCTTCAATAATGTTAAGCAATGGTTGAATGAAATAGACCGATATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGTAATAAATGTGATCTCACTGCAAATAAGGTCGTTTCTTATGAGACAGCCAAGGCCTTTGCTGATGAAATTGGGATTCCATTCATGGAAACAAGTGCTAAAAGCGCCACCAATGTGGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGATGGCAACACAACCAATGAACAACGCCAGGCCGCCGACAGTGAACATTCGAGGACAACCTGTGAATCAGAAATCTGGTTGCTGCTCATCTTAAAGATGGATGCCTCTTATCGAATGATTGACTGATGATGGTGGTGATGTTTATGTATGGACCGTGACATGTAAAACTAGTTGTCTCTCTCCCTGTCCCTGTCTCTGTTGCTTTTCGTATGGAAAGATTCGTCCGTCATGATTTGCCTTTTATTCTATGTCTTTTGTCGTCAGACCTTTGTTAACTCTTCCATTCTTTCCAATATATTTGTTTCTGGATCAACATTATTCAGCTGTAAAATTTAGATATCAATGACCAGTAGAGTATTTGCTTCATTTTCTTTATTATTCATTCATCCATTCCTAATAATAAATCTCATTCTTATTT

Coding sequence (CDS)

ATGAATCCTGAATACGACTATTTGTTTAAGCTTCTTCTTATCGGAGACTCGGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGATGATTCGTATCTGGATAGCTACATTAGCACTATCGGAGTGGACTTTAAAATTCGTACTGTGGAACAGGATGGAAAGACAATTAAACTTCAAATTTGGGACACTGCCGGTCAAGAACGTTTCAGAACAATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATTGTTGTGTATGACGTTACAGATCAGGAGAGCTTCAATAATGTTAAGCAATGGTTGAATGAAATAGACCGATATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGTAATAAATGTGATCTCACTGCAAATAAGGTCGTTTCTTATGAGACAGCCAAGGCCTTTGCTGATGAAATTGGGATTCCATTCATGGAAACAAGTGCTAAAAGCGCCACCAATGTGGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGATGGCAACACAACCAATGAACAACGCCAGGCCGCCGACAGTGAACATTCGAGGACAACCTGTGAATCAGAAATCTGGTTGCTGCTCATCTTAA

Protein sequence

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNNARPPTVNIRGQPVNQKSGCCSS

Homology

[Close]

BLAST of Cmc04g0087171 vs. NCBI nr
Match: XP_004148356.1 (ras-related protein RABD2c [Cucumis sativus] >XP_008465881.1 PREDICTED: ras-related protein RABD2c [Cucumis melo] >XP_038888953.1 ras-related protein RABD2c [Benincasa hispida] >KAA0038499.1 Ras-related protein RABD2c [Cucumis melo var. makuwa] >KGN60467.1 hypothetical protein Csa_000830 [Cucumis sativus] >TYK31093.1 Ras-related protein RABD2c [Cucumis melo var. makuwa])

HSP 1 Score: 405.6 bits (1041), Expect = 2.5e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. NCBI nr
Match: XP_022931789.1 (ras-related protein RABD2c [Cucurbita moschata])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 200/202 (99.01%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQK+GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKTGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. NCBI nr
Match: XP_022159480.1 (ras-related protein RABD2c [Momordica charantia])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 200/202 (99.01%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQK+GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKAGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. NCBI nr
Match: XP_022958560.1 (ras-related protein RABD2c-like [Cucurbita moschata] >XP_022995189.1 ras-related protein RABD2c [Cucurbita maxima] >XP_023521387.1 ras-related protein RABD2c [Cucurbita pepo subsp. pepo] >XP_023533221.1 ras-related protein RABD2c [Cucurbita pepo subsp. pepo] >KAG6606206.1 Ras-related protein RABD2c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036151.1 Ras-related protein RABD2c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQK GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKGGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. NCBI nr
Match: XP_023554189.1 (GTP-binding protein YPTM2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 199/202 (98.51%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVE+AFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEDAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQK+GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKTGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy Swiss-Prot
Match: Q9SEH3 (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-101
Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ++PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy Swiss-Prot
Match: Q9FPJ4 (Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-100
Identity = 183/202 (90.59%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NK DLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           A+PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy Swiss-Prot
Match: Q05737 (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.7e-100
Identity = 184/203 (90.64%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQP-MN 180
           NK DLTANKVV+ ETAKAFADE+GIPFMETSAK+ATNV++AFMAMAA IK+RMA+QP   
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180

Query: 181 NARPPTVNIRGQPVNQKSGCCSS 203
           NARP TV IRGQPVNQK+ CCSS
Sbjct: 181 NARPATVQIRGQPVNQKTSCCSS 203

[Close]

BLAST of Cmc04g0087171 vs. ExPASy Swiss-Prot
Match: P28188 (Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3)

HSP 1 Score: 362.1 bits (928), Expect = 4.2e-99
Identity = 178/203 (87.68%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPM-N 180
           NK DLT N+ + YETAKAFADEIGIPFMETSAK ATNVE+AFMAM+A IK RMA+QP  N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 NARPPTVNIRGQPVNQKSGCCSS 203
           NARPPTV IRGQPV QK+GCCS+
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203

[Close]

BLAST of Cmc04g0087171 vs. ExPASy Swiss-Prot
Match: P40392 (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 2.7e-98
Identity = 179/202 (88.61%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDL  N+VVSYE  KA ADEIGIPF+ETSAK ATNVE+AFM MA EIKNRMA+QP  N
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180

Query: 181 A-RPPTVNIRGQPVNQKSGCCS 202
           A +P TV +RGQPV Q+S CCS
Sbjct: 181 ASKPATVQMRGQPVAQQSSCCS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy TrEMBL
Match: A0A5A7TAX6 (Ras-related protein RABD2c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003700 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy TrEMBL
Match: A0A0A0LID7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G913980 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy TrEMBL
Match: A0A1S3CQ93 (ras-related protein RABD2c OS=Cucumis melo OX=3656 GN=LOC103503466 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy TrEMBL
Match: A0A6J1DYV6 (ras-related protein RABD2c OS=Momordica charantia OX=3673 GN=LOC111025883 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.0e-109
Identity = 200/202 (99.01%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQK+GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKAGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. ExPASy TrEMBL
Match: A0A6J1EV78 (ras-related protein RABD2c OS=Cucurbita moschata OX=3662 GN=LOC111438063 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.0e-109
Identity = 200/202 (99.01%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ+SFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQK+GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKTGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. TAIR 10
Match: AT4G17530.1 (RAB GTPase homolog 1C )

HSP 1 Score: 370.5 bits (950), Expect = 8.3e-103
Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ++PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. TAIR 10
Match: AT5G47200.1 (RAB GTPase homolog 1A )

HSP 1 Score: 367.1 bits (941), Expect = 9.2e-102
Identity = 183/202 (90.59%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NK DLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           A+PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCSS 202

[Close]

BLAST of Cmc04g0087171 vs. TAIR 10
Match: AT1G02130.1 (RAS 5 )

HSP 1 Score: 362.1 bits (928), Expect = 3.0e-100
Identity = 178/203 (87.68%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPM-N 180
           NK DLT N+ + YETAKAFADEIGIPFMETSAK ATNVE+AFMAM+A IK RMA+QP  N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 NARPPTVNIRGQPVNQKSGCCSS 203
           NARPPTV IRGQPV QK+GCCS+
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203

[Close]

BLAST of Cmc04g0087171 vs. TAIR 10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 302.0 bits (772), Expect = 3.6e-82
Identity = 148/202 (73.27%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NK D+  +KVVS ET +A ADE+GIPF+ETSAK + NVE+AF+ +A EIK +M +Q   N
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180

Query: 181 --ARPPTVNIRGQPVNQKSGCC 201
             + P TV ++GQP+ Q +G C
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGC 202

[Close]

BLAST of Cmc04g0087171 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 242.3 bits (617), Expect = 3.4e-64
Identity = 125/208 (60.10%), Postives = 155/208 (74.52%), Query Frame = 0


Query: 4   EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
           +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11  DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70

Query: 64  TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
           TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++AS+NVNK+LVGNK 
Sbjct: 71  TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130

Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNNAR 183
           D+  +K  V     +A ADE GI F ETSAK+  NVEE F ++A +IK R+A    + A 
Sbjct: 131 DMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTD-SRAE 190

Query: 184 PPTVNI--------RGQPVNQKSGCCSS 203
           P T+ I         GQ   QKS CC S
Sbjct: 191 PATIKISQTDQAAGAGQ-ATQKSACCGS 216

The following BLAST results are available for this feature:

BLAST of Cmc04g0087171 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148356.1	2.5e-109	100.00	ras-related protein RABD2c [Cucumis sativus] >XP_008465881.1 PREDICTED: ras-rela...	[more]
XP_022931789.1	1.2e-108	99.01	ras-related protein RABD2c [Cucurbita moschata]	[more]
XP_022159480.1	1.2e-108	99.01	ras-related protein RABD2c [Momordica charantia]	[more]
XP_022958560.1	1.6e-108	99.01	ras-related protein RABD2c-like [Cucurbita moschata] >XP_022995189.1 ras-related...	[more]
XP_023554189.1	2.8e-108	98.51	GTP-binding protein YPTM2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc04g0087171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEH3	1.2e-101	90.59	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
Q9FPJ4	1.3e-100	90.59	Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=1 SV=1	[more]
Q05737	1.7e-100	90.64	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
P28188	4.2e-99	87.68	Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3	[more]
P40392	2.7e-98	88.61	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]

BLAST of Cmc04g0087171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAX6	1.2e-109	100.00	Ras-related protein RABD2c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0LID7	1.2e-109	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G913980 PE=4 SV=1	[more]
A0A1S3CQ93	1.2e-109	100.00	ras-related protein RABD2c OS=Cucumis melo OX=3656 GN=LOC103503466 PE=4 SV=1	[more]
A0A6J1DYV6	6.0e-109	99.01	ras-related protein RABD2c OS=Momordica charantia OX=3673 GN=LOC111025883 PE=4 S...	[more]
A0A6J1EV78	6.0e-109	99.01	ras-related protein RABD2c OS=Cucurbita moschata OX=3662 GN=LOC111438063 PE=4 SV...	[more]

BLAST of Cmc04g0087171 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17530.1	8.3e-103	90.59	RAB GTPase homolog 1C	[more]
AT5G47200.1	9.2e-102	90.59	RAB GTPase homolog 1A	[more]
AT1G02130.1	3.0e-100	87.68	RAS 5	[more]
AT3G11730.1	3.6e-82	73.27	Ras-related small GTP-binding family protein	[more]
AT5G59840.1	3.4e-64	60.10	Ras-related small GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 147..169 score: 46.71 coord: 9..30 score: 56.84 coord: 112..125 score: 56.24 coord: 50..72 score: 58.74 coord: 32..48 score: 34.84
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..173 e-value: 0.0022 score: 3.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..172 e-value: 4.0E-37 score: 139.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..172 e-value: 3.5E-109 score: 378.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..199 e-value: 5.8E-6 score: 35.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..202
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 6..201
None	No IPR available	PANTHER	PTHR47977:SF6	RAS-RELATED PROTEIN RABD2A-LIKE	coord: 6..201
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..174 score: 11.438087
None	No IPR available	PROSITE	PS51419	RAB	coord: 4..202 score: 39.419506
None	No IPR available	PROSITE	PS51417	ARF	coord: 2..178 score: 8.615717
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 7..172 e-value: 4.10278E-131 score: 363.187
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 11..171 e-value: 6.6E-16 score: 68.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..170 e-value: 4.1E-67 score: 224.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..202 score: 21.014259
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..164 e-value: 9.7E-35 score: 117.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..197 e-value: 8.5E-78 score: 262.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0087171.1	Cmc04g0087171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding