Cmc04g0086971 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAATTATCTTTTTATTATTATTCTAAATCTAATATCTAAACCACTCTCTTCCTCTCTCTCTCTCTCTCTCTCTTCCTTTTTCTCCTTTTCTCTCCACTCCCATGGCTGAAGAATCCAAGAAAATCGAATCCCCGCCGCCCTCCGATCCTCCTCCCCCACCGCCTGAAGAGCTCCCCAAAGACGTCGCCGAGGAGAAATCCGTCATTCCCCCACCGCCTGAAGACAAAACTGATGACTCTAAAGCCCTCGTTCTTGTTGAAAGTAAGTCAATTCTTCGTTACCACCACCCCCCCCCTCCTTTTTTTTATCCTCTCTCTCTTCTCCCTTCTCTTTTTTTATTAATATTTTCACCTCAGAGTTTTCTATATTTAATTCTGATGAAATTTGATTCAATTTTTAAATTTTTTTTTTTATATATAATTTTACTGTATGCTGTCAATTGGGAAAGTTGAGTTTTTAGTTTGGGTGTTGGAATGGAAATCACTAGAAAGAAGACAGATACTTTTCCCAGTCATAAATTATTTTTAATTAATCTTTTGTTGTTTTCTCTTATGCAGAGGTTCCAGAAGTTGCTGACCCCAAAAGCACTGAAGGCTCTGTAAACAGAGGTCTATTTATTTTTCATTTTTATTTTTTTGCAAATCTTAAATTGTAAATTTGATTCTTTCCATATATTAGAATTATAGTTCGACTTCAGTCTTTTAAGAAAAAAGAAAAAAAACGAAATTCTATAAGCATAGGGATCAAACATGAAATTTAATTTATTCCTACATATTTTGACATAGATCTTGCGGAATACTTCAACAATTAAAGGAAATGTTTTAGAAATGTATAAAACTAAAATAGGAAGATCATTTCGTAATAATAATTTAGTTTTGTAGTCTATTAATACTAATTTTCTTTTTACTTCTGGAATCTTAGTGATGCAAATATTGCATTTTATATTTCTTTAATAAAACATTATATATAAACTTTAGGTTAAATAAGGAGAGTGGTTGGGAAACAGAGACCTGGAATTTATATAATATAAAAGGAGAATAGGATTTTAAAGTAAGTAATATTATTTAGAGTGAAAGAATGAGTTTATATGAATATAATTTGTTGAGATACGCACAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCATTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAAAACAAGTAAGACCACCTCATTTTTCAATTTCACTTTTCTTATATCATCATGTAATTTTGTAATACTTTTCATTTTTAATTTTCATAATCTTATAAGACCCAACTTATTTTTCCATCTTGTTTTGCAGAGCTCACAAAAAGCTATCTTCTGTTGCTGCATGGGAGAATAGCAAAAAAGCTTCTGTAGAAGCTGAGTTGAAGAAGATTGAGGTATCAAATATACTTTATTACCCACCTTTACTCTATATCATATTTTGTTTTTTTTTTTTTTTCCTTTCTTTTTAATCATTCAAATACTTCATTTTACAATATAGACAAACATGGTTGAGTTGATTTGTAGTTTGGGAGTGATATTATTTTGACGACAGCTAGCTGATTAAACAAAACTTTGAGCAGGAAAGTTTGGAGAAAAAGAAGGGCGAGTACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCAGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCAAAGAAGCTTCTCGGCTGCTTCTCGAGCTGAATGTCTCGTTTCCAATCTCTGATTATTGCATGCGGTGTAGTGGGAAATACAAATCTTCATCAGTTGGGGGTGTTAATTAGATGTGCTGTGTGTGTGATGGAAGGAAAATTATTGTTTATGGTTTGATTTATTGGTGTGTGTTCAGGGCTTATGTGTTTTGTGAATATGATATTTGGAGGAAGATTACTTTGAATGTAAATCAATATTGTTATTTTAATACGTTTTGTTGTTGTTCATTCACATGAAAATTTTTGAAAAGATCAGC CCCAATTATCTTTTTATTATTATTCTAAATCTAATATCTAAACCACTCTCTTCCTCTCTCTCTCTCTCTCTCTCTTCCTTTTTCTCCTTTTCTCTCCACTCCCATGGCTGAAGAATCCAAGAAAATCGAATCCCCGCCGCCCTCCGATCCTCCTCCCCCACCGCCTGAAGAGCTCCCCAAAGACGTCGCCGAGGAGAAATCCGTCATTCCCCCACCGCCTGAAGACAAAACTGATGACTCTAAAGCCCTCGTTCTTGTTGAAAAGGTTCCAGAAGTTGCTGACCCCAAAAGCACTGAAGGCTCTGTAAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCATTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAAAACAAAGCTCACAAAAAGCTATCTTCTGTTGCTGCATGGGAGAATAGCAAAAAAGCTTCTGTAGAAGCTGAGTTGAAGAAGATTGAGGAAAGTTTGGAGAAAAAGAAGGGCGAGTACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCAGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCAAAGAAGCTTCTCGGCTGCTTCTCGAGCTGAATGTCTCGTTTCCAATCTCTGATTATTGCATGCGGTGTAGTGGGAAATACAAATCTTCATCAGTTGGGGGTGTTAATTAGATGTGCTGTGTGTGTGATGGAAGGAAAATTATTGTTTATGGTTTGATTTATTGGTGTGTGTTCAGGGCTTATGTGTTTTGTGAATATGATATTTGGAGGAAGATTACTTTGAATGTAAATCAATATTGTTATTTTAATACGTTTTGTTGTTGTTCATTCACATGAAAATTTTTGAAAAGATCAGC ATGGCTGAAGAATCCAAGAAAATCGAATCCCCGCCGCCCTCCGATCCTCCTCCCCCACCGCCTGAAGAGCTCCCCAAAGACGTCGCCGAGGAGAAATCCGTCATTCCCCCACCGCCTGAAGACAAAACTGATGACTCTAAAGCCCTCGTTCTTGTTGAAAAGGTTCCAGAAGTTGCTGACCCCAAAAGCACTGAAGGCTCTGTAAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCATTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAAAACAAAGCTCACAAAAAGCTATCTTCTGTTGCTGCATGGGAGAATAGCAAAAAAGCTTCTGTAGAAGCTGAGTTGAAGAAGATTGAGGAAAGTTTGGAGAAAAAGAAGGGCGAGTACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCAGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCAAAGAAGCTTCTCGGCTGCTTCTCGAGCTGA MAEESKKIESPPPSDPPPPPPEELPKDVAEEKSVIPPPPEDKTDDSKALVLVEKVPEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSKKASVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCFSS Homology
BLAST of Cmc04g0086971 vs. NCBI nr
Match: XP_008465865.1 (PREDICTED: remorin [Cucumis melo]) HSP 1 Score: 342.8 bits (878), Expect = 1.9e-90 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Cmc04g0086971 vs. NCBI nr
Match: XP_011652698.1 (remorin [Cucumis sativus] >KGN60481.1 hypothetical protein Csa_002244 [Cucumis sativus]) HSP 1 Score: 314.3 bits (804), Expect = 7.3e-82 Identity = 178/193 (92.23%), Postives = 186/193 (96.37%), Query Frame = 0
BLAST of Cmc04g0086971 vs. NCBI nr
Match: XP_038888841.1 (LOW QUALITY PROTEIN: remorin-like [Benincasa hispida]) HSP 1 Score: 297.4 bits (760), Expect = 9.2e-77 Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Cmc04g0086971 vs. NCBI nr
Match: KAA0038488.1 (remorin [Cucumis melo var. makuwa]) HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75 Identity = 172/193 (89.12%), Postives = 172/193 (89.12%), Query Frame = 0
BLAST of Cmc04g0086971 vs. NCBI nr
Match: XP_022952053.1 (remorin-like [Cucurbita moschata]) HSP 1 Score: 289.3 bits (739), Expect = 2.5e-74 Identity = 167/196 (85.20%), Postives = 176/196 (89.80%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-58 Identity = 146/200 (73.00%), Postives = 168/200 (84.00%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.8e-51 Identity = 132/203 (65.02%), Postives = 155/203 (76.35%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50 Identity = 125/203 (61.58%), Postives = 148/203 (72.91%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.2e-44 Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.8e-09 Identity = 46/132 (34.85%), Postives = 69/132 (52.27%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 9.2e-91 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy TrEMBL
Match: A0A0A0LKG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.5e-82 Identity = 178/193 (92.23%), Postives = 186/193 (96.37%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy TrEMBL
Match: A0A5A7T6L0 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00110 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 8.4e-76 Identity = 172/193 (89.12%), Postives = 172/193 (89.12%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 1.2e-74 Identity = 167/196 (85.20%), Postives = 176/196 (89.80%), Query Frame = 0
BLAST of Cmc04g0086971 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 2.3e-73 Identity = 170/197 (86.29%), Postives = 175/197 (88.83%), Query Frame = 0
BLAST of Cmc04g0086971 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein ) HSP 1 Score: 203.8 bits (517), Expect = 1.3e-52 Identity = 132/203 (65.02%), Postives = 155/203 (76.35%), Query Frame = 0
BLAST of Cmc04g0086971 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein ) HSP 1 Score: 203.0 bits (515), Expect = 2.2e-52 Identity = 134/203 (66.01%), Postives = 156/203 (76.85%), Query Frame = 0
BLAST of Cmc04g0086971 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51 Identity = 125/203 (61.58%), Postives = 148/203 (72.91%), Query Frame = 0
BLAST of Cmc04g0086971 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein ) HSP 1 Score: 194.9 bits (494), Expect = 6.0e-50 Identity = 116/168 (69.05%), Postives = 133/168 (79.17%), Query Frame = 0
BLAST of Cmc04g0086971 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein ) HSP 1 Score: 178.7 bits (452), Expect = 4.4e-45 Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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