Cmc03g0083601 (gene) Melon (Charmono) v1.1

Overview
NameCmc03g0083601
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionExtensin_2 domain-containing protein
LocationCMiso1.1chr03: 28273504 .. 28280285 (+)
RNA-Seq ExpressionCmc03g0083601
SyntenyCmc03g0083601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATTCTTTACAATACATTGTTACAAAAATAGAAGGACATACAAATAGTTATGGTAATTAATTTTATGGGTACACAAAATTAATGCCAAATATGGAAAAGGGTTAGTATAAATAATTGACATTAGGTGTTGATTTGAGACATAATCTTTCATCATAATCATCATAGAGAAGAAGAAAAGATGAATGCTGTAGGGTTCTTTCTGCTTTTCCTTTTCTCCCTTTTCTCTCATTCCTTTGTCCATGCCGCCCGTGTAACATTCCCGGAGCTGAAGCAATCTTCCAAAGCTGCGTATCTCCTACCCTCTCCGCCGCCTCCCAGTCCTCCGGCTGCATTCCTCTTCCTCTCGCCACCACCTCCTGCAAAACTCTTCTCAAGATCTTCGAAGCTTCCGCCTCCGAGTCCTCCCGCGGCCTTCCTGTTTCTGTCTCCGCCACCTCCTTCTGCGTTCCTGTATACCTCTCCGCCGCCCCCGGCGCAGGTGGCGGAATGATGTGTGAAAGACCGTACGGAGCGGAGAAGTAAATGGGCTTTTTTATAGCTAAGGCCCATTTGGAAGCTAACAACGTTGTAATTTGTGTGTGTGTTTGATTTTTTTCTTAAGAAAAAGAACAACACAGAAAATATAAATTGTGAGTCTTTCTCTTCGTGTTTTTAATAATCTTAATAAAAACCAACCTAAAACGATTCCTATTGTATTGCTCTCTTTGATTTGATTACTCCCGCCGAAAAAAAAAACCAATTTTGACGTGTTTAGATTATATTTTCAAGTGTTTAATTTAAAAAATAAAAACAATTTCTTCAAAAAAAATTCAACAATTTATTTTTGTTTAAACAATACGAAAGGGTGTGAGTATTGGGCCTGAAGGCCCGGCCGAAATACAATTCGAAGCTAGGAACACTTCGGTTGTCTAGGCTTTAGAATGGGCTAGACTACTACTGGGCTCATTAGTCCCACGTTCTGGGTAGCTTAGATGCGTGTCATGGAGCCCAAGCCCATCTTCTTCTCTTATAAATAATTCCATAGCTATACAAATGAAACATATTGAACTTAAGTGAGGTTGACTTAGTGTTATTGACATTTGCTCAATTTGACAAATTAAAAGTTTAATTGGAGTAAATATGGACAGTACAACGTTATCAAATTTATAAAATTCCTATGGACAAATTGCAATGACACCAAAATAAAAACACACTTTAGATATGAGGAAATGGATAAAAAGGAGAAGAATATCCTTTATTAAGAATATATATATATATATATAATAAAGCAAATTTATACCAACCCCTAAAGTTAAAAAACATTGCGTGACATAAAATAGTAAATTTACACATTCTTCCAATCTTTAAGATTGTTATTGGGAAGAAGAATCTTTAAAGGCCATACCAAAACAGAGGGAAATATAAATACATGCATTACCAAAAATGGTAATTGTGAAAAAGATATATTCCAAAGCAAAAGGAGTGCAAGTAAATTCAAACCGATACCCACTTTCTATCATTAGAAATACAGACACATCTAACTAAGTAGGAGAATGAATCAATAAATCAAAAGAACTAACAACAACACTTTAGATAACCAATAACAAAATTACAATAGCCCTCTGTTGTTTATGTTGTGTATATATATATATATATATATATATATATATATATATATATATATCATCATTATAATTATCCAATTTGTTTAATAATATTGTTTCTTTTTCTTTTTGTAATAAAAAGGATTCATTGCAAGTGGATAAGCTTTGTGAAATGCAAGTGTTTATATATATATGTATGTATGTATATGTATATGTATATTTTCACTAAAATATATTTTTATTATACACATGAAAAAATAAAAGAAAAGAAAAAACACTTCCAACTTGAATTTCTTCCCCATCCCATTCCAAATGAATTCAAATAAAAGAAATCATTATGGCTTAGGACCCCACTTTTCCACCCAACTTTTATTTTATTGTAATCCACAGAACTTGGGATTTTTATTATTGATTTTACACAAAACTTGGGATCTTATTTTTTCACAATAGTTTTTAAATTTAGCCTCTTTTTATGAAGTCTTTTATATAAATTCTATACATAATATAACCGTAGCCATATTAATATTCATTCTTTTGAAATCTATGTCTTCGGAATCTCTAACACTTCCTTAATCTATCGTAACCCTACCCACATAACCCTTCTCCCAAACACATCTTATCAAAACATTATCATAACACTTCTTCCATAACTCTTCCCCCAAACACATCTTATCATAATCATAGGTTTATCATAACCCTAACTCTCCATAACCCAACTCTTCCCCCAAACGCCCCCTAAGTTATTTAAGGATACGTCATAAAAAAAAAAAAAAAAAACTGTTCGAATAATCATAATTTCAAATTAATTATTGTAGAAAATGTATTTTTTATCACTAAAATCCATTAGAAAAAAAAAAAAAAAAAAGACTGTACTTCAAAATTTCAAAGATACGAGAATGCCTAGATTGATCCTGGGGTTATAGCTAGGCACAAGCATCCTTCACTATTATAGCAAAAATGAAAGTCTTTTTTTTTTCTTAATGAAAAAATAAAATAAGGTTGGTTGAAGTTATATTAAACCAAATTAATATAAAGATATACATATAAACAGATCCATAGATATGTATGGATAGTGATATTAAAAATAGCAAAAAGAGAGGTTATGCAATCAATCACATCATTCTGCTAAAACATATATCTTACTTCATTTTGAGTAAAATAATAAAATATGTGCTAATCTCATTTCCACTCTCCATCCTCACATGCTCATCTCATCTCACCATGTTTTCTTTTAAACCAAGGTAAAACACAAAAGGCAAACAAATACTAGAAACAACAACAATAACAAGTAATACAAATTCGTTTTGTTGTTTTTTCAACAATGTATATGTTTTATGCAACTAAAAATTGTCTTCAAAATATAAAACTCGAACATAAATGACTTAAATGAGTTTTTTTACCTAACAACCATTTTTTCTTCCAATTATCTATTTTCTCGTCATTTTAGACATTTTATGTATTGATATGTCAATGCAGCAGTTGAAACATGCTTACTTTGTCTACTTATCATACCATTTTTTATTTATATCAATGAAATTCTTTAGGTCTATTAAATTGTATATGCTATTCTTTACGTTAACCTCAATAATATATTCCAAATGATTAAATGTCAAGGATGCTGAGATTATGTTAATCTAATTAAGATAATTGGGTACACCAACTCAGTCCTATTGTATTTATATTTAAAAGAATATATGTACACATTATAAAAGAAACAAAATTTGAAAGTCAAGAGTTACAACATAAATTAATAATGTTTGATTAATATTCTGTTTATAGTATGGGTTGGTGTATTTTTTTATTTTTTATTTTGGAATGGGACCCACACATAGACCCTCTAAAGAGAAAAGAAAACAAATTATATTAAATATGAGAAATTGGTGATGGGAGGTTGAGGGGTCATGTCCTAAGAGAGGGAAGTTGGGCCCAATGACCAGAGGCCCACTTTGTTCTCTTTTGTCAATGGAAGCAGATAATTAAAAGCAATTGAGTAAGAGTTCCTTTGCCACCACCACATGGGGCAACACATCATTATCATTTTTGGTTCTCTCTTATTCTCATTCATTATTTAAGGAGTAGTTTCACAAATAAATACATGGAAAAAAATATTTTAAATGTCAAAACTGTTCAAAACAAAAATATCAACCGTCTATATCGATTGACATCTATCAGTGATGGATAATAATAGACTAATGCTTATAGATATTTTTATTTTATTATATTTGTGTATATGTGTTTGTGTGCGCGCCAAAATAGGTTTTTTTTTTCTAACAACCTCGAATAAAAGGTTTGAATCTCCCGACTCAAATGTTGTAAAAAGAGAAAACAATAAACATATATATTTTAGAAAAGAAGAATATATATATACACATACATATATTAAAAACTTTATAAATAAAATAATTAGAACTTTAGACTTTTTGCATCCTGATTTATATATGGTATAATGTTTTTTTAGGATATACTCTATTTTAATTCCTAAATTATCCATAAACAATTATTCTTTATTTATAGTTGATATGAAATCATCTTATTTTCATCTATTTTGTTTGAATTAATATGTGGTATAGTCTCAAAGTCCTATTTTTAAATGAATTCAAATTATCACTTAATCGTTAGTGAATGATTAATAAAAACATAAATCAAAATATTAAAACTTGGAATATAATTATTTTTTAAAAAAAATGAGATTTAGGTATCTATTTGTGTTATTACATATCACATTGAGCAAATTTCATTTTAGAAGCCATCAAAAGTAATCCTAAAAACTAATCAAATAAAGGACAATAGACTAACAAATCCTCTTCCCCTTTGGAATTACATACATACATACATACATACATACATACATACATACACCCTAAACAATTTGGGGTCTCATAATTAGGGCTTCTCAATTATCAAGGCACTTTAGATGGCCCCTCCACATACACCCACCTATTGTTCCAACCCTAATTTTATTCATTTTTATGTCCTTTGAATTTTATTTTTAATCACCAAAAACTCCAACAATTCTTCTATTTCTCCACTGTTTTTTCCTACCTAAATCTTTTGTTCGGTATGAAAATTGAATTTATTCAAATAAAGAGGATAAAACTTCAAATTGAATTTTCTTCCGAAAAATCATCATATCTTAATGTAATGTCTACAGTAAACACAAAATAAAATTGAAAATTTTGAACTTTGACATTTGTTACGAATTTCAAATCATGGTGTACTATTTAATTACGCATTAAATTTGAATAAGTTGTAAAATGAATGCTTTATTTGAAATTAAGCTATAAAGAATTGCTAAAGAAGTTCACCAATAACAACCCCATAATCCAACAACAAAATATCTCAAATCACTTTAATATTAGGATTTTTTTTTTCAAAGCCTATTTATTTTCCATATAATTTGAATAAAGTTAGCTCACCCCAATAATCATAATCTATGATTTATTTACACCAATAGTCTTTCTTTTTTTAGTTATTATTAAAATCAAAACAATAATTATGTACTATCATGAAAACAAATCGTGTTGAATAAAATTAATAAAAAACAATGGAGACCTAAAATTGTTATTGGATGAATCATCTACATTAAAGTATAATACCAATATATTTGGATAAGATGAGAGATTGTGACTTTTAAATTTTTAGGCCAACTATATGGGTAAGATCTGAATACAGGCACTTGTAATGGGAATGGGATGAATCTTGTCCTATTAAAAAAGAGAAAGAAAAAGAAGAAAAAAAATGATGATTCTGAGTATCAAAATATCAAAATTTCATTGAAGAAAAGAAACACTAATGGACCATGGTAGGCGACCAAATGGGTGCTAACTAAAAGTTTATTTGGTAAAAATGATGTCAAGACCCACCCAACTGCTCTCACCGAATTAAAAAGCTTTGGCAAGACTGAGCAAAAACATAATTGTTTTATTGGGAAATAGCTTTAGGGGGAATTGATTAAATTAGTTAGAAGTTGTTTGCTCGGTTTGCTCCAATAGCTGAATGGTTCTGATTCTGATCACTTTTCTTTTCCCACATCAAAGCAGATTTCACACCCACCAGTTTTAACATTCAAAAACTTTATCATCACTCCAACCTAACTTTACTTGGCACTTTCACTTTCTCGGGGTGGAAAAATGGGAGCTGGAAAGCATATAGAACATGACGATCAGTAGTGACCTTGCGGATTCATCAGTTGCACAGAATTGATTCAACAACTTCCAAAAATTTCAAGGACAACTGATGTTAAAGAGGTGTTTACTGATGACTAAAATGAAACCAAAAGAAAGAAAAGTATCTTTGTTTTAGTAGTTTGTTCTTAATGGATTGAACTGTTTGTTGAGATGATTTGAATATGCAGATGGGTATCAATGAATCGAGGTGGATTCAGATCTGGGTTGATAGTTCAAATAGATCTGAAAATTCAACCATGAAAAGCTAGTTGGTAAATACCAAACTCCGGGCAGGAAGTTTCTAATAATTGACACTAGAATTGGACAGATAGGCTAATAATAACAATAAACCATTATTTAGACTGCATGAGTTGCAGTCAAATCCGTCCACTAGCAATTTGTGCAATTAAAGCAAAGTGGGTTTGATTCCAAAAGTCCCTTTCCAGTTCCACAGTCAAAATATGCTTAGAAAACAAATTGTATAAAACAGAGCCACAATCCACATCCAAAAAAAACCCTGTTTTTCTCTCTCAGGCATTTCCACAAACACCTTCCGTACGCAAATTTTTTTTTTCTTTTCCCCACTGAACACCCACTCTCTAACTTTCAAAGATTCCTTGATCTACCATAAACAATTCGATTATTAGGATTATCTGAGGAAAGAATCAGAGACATAGATCACATATGGGGGGGAAGAGGATGAATGAAACGGCGAGAAACTATTCACAAATGGAAAGCTTGTAAAAGTGGGTTTGAAGAAAATACCGAACCCAAATCCGGGTAATTGTATAATGGCTTTTGAGAATTGTTCGAAACCAAAAAAGCTAATTCACGTAATCCCTATCCCCTAAACTTAGAATTCGATTAATACTAATCCAATTCTTCAACCAAACGAAAAAAAAAAAAAAAAAAGTTACCTTTTCAATGGGCGCGCTCTTTTTTCCCTAAAAAAAGTTTGATTCATCCAAGAAAATCAAAAGCTTCTCTTCGATTCCTTCCCTTCCCTTTCTTCCATCTTCTCGGCAACTGT

mRNA sequence

TTTTATTCTTTACAATACATTGTTACAAAAATAGAAGGACATACAAATAGTTATGGTAATTAATTTTATGGGTACACAAAATTAATGCCAAATATGGAAAAGGGTTAGTATAAATAATTGACATTAGGTGTTGATTTGAGACATAATCTTTCATCATAATCATCATAGAGAAGAAGAAAAGATGAATGCTGTAGGGTTCTTTCTGCTTTTCCTTTTCTCCCTTTTCTCTCATTCCTTTGTCCATGCCGCCCGTGTAACATTCCCGGAGCTGAAGCAATCTTCCAAAGCTGCGTATCTCCTACCCTCTCCGCCGCCTCCCAGTCCTCCGGCTGCATTCCTCTTCCTCTCGCCACCACCTCCTGCAAAACTCTTCTCAAGATCTTCGAAGCTTCCGCCTCCGAGTCCTCCCGCGGCCTTCCTGTTTCTGTCTCCGCCACCTCCTTCTGCGTTCCTGTATACCTCTCCGCCGCCCCCGGCGCAGGTGGCGGAATGATGTGTGAAAGACCGTACGGAGCGGAGAAGTAAATGGGCTTTTTTATAGCTAAGGCCCATTTGGAAGCTAACAACGTTGTAATTTGTGTGTGTGTTTGATTTTTTTCTTAAGAAAAAGAACAACACAGAAAATATAAATTGTGAGTCTTTCTCTTCGTGTTTTTAATAATCTTAATAAAAACCAACCTAAAACGATTCCTATTGTATTGCTCTCTTTGATTTGATTACTCCCGCCGAAAAAAAAAACCAATTTTGACGTGTTTAGATTATATTTTCAAGTGTTTAATTTAAAAAATAAAAACAATTTCTTCAAAAAAAATTCAACAATTTATTTTTGTTTAAACAATACGAAAGGGTGTGAGTATTGGGCCTGAAGGCCCGGCCGAAATACAATTCGAAGCTAGGAACACTTCGGTTGTCTAGGCTTTAGAATGGGCTAGACTACTACTGGGCTCATTAGTCCCACGTTCTGGGTAGCTTAGATGCGTGTCATGGAGCCCAAGCCCATCTTCTTCTCTTATAAATAATTCCATAGCTATACAAATGAAACATATTGAACTTAAGTGAGGTTGACTTAGTGTTATTGACATTTGCTCAATTTGACAAATTAAAAGTTTAATTGGAGTAAATATGGACAGTACAACGTTATCAAATTTATAAAATTCCTATGGACAAATTGCAATGACACCAAAATAAAAACACACTTTAGATATGAGGAAATGGATAAAAAGGAGAAGAATATCCTTTATTAAGAATATATATATATATATATAATAAAGCAAATTTATACCAACCCCTAAAGTTAAAAAACATTGCGTGACATAAAATAGTAAATTTACACATTCTTCCAATCTTTAAGATTGTTATTGGGAAGAAGAATCTTTAAAGGCCATACCAAAACAGAGGGAAATATAAATACATGCATTACCAAAAATGGTAATTGTGAAAAAGATATATTCCAAAGCAAAAGGAGTGCAAGTAAATTCAAACCGATACCCACTTTCTATCATTAGAAATACAGACACATCTAACTAAGTAGGAGAATGAATCAATAAATCAAAAGAACTAACAACAACACTTTAGATAACCAATAACAAAATTACAATAGCCCTCTGTTGTTTATGTTGTGTATATATATATATATATATATATATATATATATATATATATATATCATCATTATAATTATCCAATTTGTTTAATAATATTGTTTCTTTTTCTTTTTGTAATAAAAAGGATTCATTGCAAGTGGATAAGCTTTGTGAAATGCAAGTGTTTATATATATATGTATGTATGTATATGTATATGTATATTTTCACTAAAATATATTTTTATTATACACATGAAAAAATAAAAGAAAAGAAAAAACACTTCCAACTTGAATTTCTTCCCCATCCCATTCCAAATGAATTCAAATAAAAGAAATCATTATGGCTTAGGACCCCACTTTTCCACCCAACTTTTATTTTATTGTAATCCACAGAACTTGGGATTTTTATTATTGATTTTACACAAAACTTGGGATCTTATTTTTTCACAATAGTTTTTAAATTTAGCCTCTTTTTATGAAGTCTTTTATATAAATTCTATACATAATATAACCGTAGCCATATTAATATTCATTCTTTTGAAATCTATGTCTTCGGAATCTCTAACACTTCCTTAATCTATCGTAACCCTACCCACATAACCCTTCTCCCAAACACATCTTATCAAAACATTATCATAACACTTCTTCCATAACTCTTCCCCCAAACACATCTTATCATAATCATAGGTTTATCATAACCCTAACTCTCCATAACCCAACTCTTCCCCCAAACGCCCCCTAAGTTATTTAAGGATACGTCATAAAAAAAAAAAAAAAAAACTGTTCGAATAATCATAATTTCAAATTAATTATTGTAGAAAATGTATTTTTTATCACTAAAATCCATTAGAAAAAAAAAAAAAAAAAAGACTGTACTTCAAAATTTCAAAGATACGAGAATGCCTAGATTGATCCTGGGGTTATAGCTAGGCACAAGCATCCTTCACTATTATAGCAAAAATGAAAGTCTTTTTTTTTTCTTAATGAAAAAATAAAATAAGGTTGGTTGAAGTTATATTAAACCAAATTAATATAAAGATATACATATAAACAGATCCATAGATATGTATGGATAGTGATATTAAAAATAGCAAAAAGAGAGGTTATGCAATCAATCACATCATTCTGCTAAAACATATATCTTACTTCATTTTGAGTAAAATAATAAAATATGTGCTAATCTCATTTCCACTCTCCATCCTCACATGCTCATCTCATCTCACCATGTTTTCTTTTAAACCAAGGTAAAACACAAAAGGCAAACAAATACTAGAAACAACAACAATAACAAGTAATACAAATTCGTTTTGTTGTTTTTTCAACAATGTATATGTTTTATGCAACTAAAAATTGTCTTCAAAATATAAAACTCGAACATAAATGACTTAAATGAGTTTTTTTACCTAACAACCATTTTTTCTTCCAATTATCTATTTTCTCGTCATTTTAGACATTTTATGTATTGATATGTCAATGCAGCAGTTGAAACATGCTTACTTTGTCTACTTATCATACCATTTTTTATTTATATCAATGAAATTCTTTAGGTCTATTAAATTGTATATGCTATTCTTTACGTTAACCTCAATAATATATTCCAAATGATTAAATGTCAAGGATGCTGAGATTATGTTAATCTAATTAAGATAATTGGGTACACCAACTCAGTCCTATTGTATTTATATTTAAAAGAATATATGTACACATTATAAAAGAAACAAAATTTGAAAGTCAAGAGTTACAACATAAATTAATAATGTTTGATTAATATTCTGTTTATAGTATGGGTTGGTGTATTTTTTTATTTTTTATTTTGGAATGGGACCCACACATAGACCCTCTAAAGAGAAAAGAAAACAAATTATATTAAATATGAGAAATTGGTGATGGGAGGTTGAGGGGTCATGTCCTAAGAGAGGGAAGTTGGGCCCAATGACCAGAGGCCCACTTTGTTCTCTTTTGTCAATGGAAGCAGATAATTAAAAGCAATTGAGTAAGAGTTCCTTTGCCACCACCACATGGGGCAACACATCATTATCATTTTTGGTTCTCTCTTATTCTCATTCATTATTTAAGGAGTAGTTTCACAAATAAATACATGGAAAAAAATATTTTAAATGTCAAAACTGTTCAAAACAAAAATATCAACCGTCTATATCGATTGACATCTATCAGTGATGGATAATAATAGACTAATGCTTATAGATATTTTTATTTTATTATATTTGTGTATATGTGTTTGTGTGCGCGCCAAAATAGGTTTTTTTTTTCTAACAACCTCGAATAAAAGGTTTGAATCTCCCGACTCAAATGTTGTAAAAAGAGAAAACAATAAACATATATATTTTAGAAAAGAAGAATATATATATACACATACATATATTAAAAACTTTATAAATAAAATAATTAGAACTTTAGACTTTTTGCATCCTGATTTATATATGGTATAATGTTTTTTTAGGATATACTCTATTTTAATTCCTAAATTATCCATAAACAATTATTCTTTATTTATAGTTGATATGAAATCATCTTATTTTCATCTATTTTGTTTGAATTAATATGTGGTATAGTCTCAAAGTCCTATTTTTAAATGAATTCAAATTATCACTTAATCGTTAGTGAATGATTAATAAAAACATAAATCAAAATATTAAAACTTGGAATATAATTATTTTTTAAAAAAAATGAGATTTAGGTATCTATTTGTGTTATTACATATCACATTGAGCAAATTTCATTTTAGAAGCCATCAAAAGTAATCCTAAAAACTAATCAAATAAAGGACAATAGACTAACAAATCCTCTTCCCCTTTGGAATTACATACATACATACATACATACATACATACATACATACACCCTAAACAATTTGGGGTCTCATAATTAGGGCTTCTCAATTATCAAGGCACTTTAGATGGCCCCTCCACATACACCCACCTATTGTTCCAACCCTAATTTTATTCATTTTTATGTCCTTTGAATTTTATTTTTAATCACCAAAAACTCCAACAATTCTTCTATTTCTCCACTGTTTTTTCCTACCTAAATCTTTTGTTCGGTATGAAAATTGAATTTATTCAAATAAAGAGGATAAAACTTCAAATTGAATTTTCTTCCGAAAAATCATCATATCTTAATGTAATGTCTACAGTAAACACAAAATAAAATTGAAAATTTTGAACTTTGACATTTGTTACGAATTTCAAATCATGGTGTACTATTTAATTACGCATTAAATTTGAATAAGTTGTAAAATGAATGCTTTATTTGAAATTAAGCTATAAAGAATTGCTAAAGAAGTTCACCAATAACAACCCCATAATCCAACAACAAAATATCTCAAATCACTTTAATATTAGGATTTTTTTTTTCAAAGCCTATTTATTTTCCATATAATTTGAATAAAGTTAGCTCACCCCAATAATCATAATCTATGATTTATTTACACCAATAGTCTTTCTTTTTTTAGTTATTATTAAAATCAAAACAATAATTATGTACTATCATGAAAACAAATCGTGTTGAATAAAATTAATAAAAAACAATGGAGACCTAAAATTGTTATTGGATGAATCATCTACATTAAAGTATAATACCAATATATTTGGATAAGATGAGAGATTGTGACTTTTAAATTTTTAGGCCAACTATATGGGTAAGATCTGAATACAGGCACTTGTAATGGGAATGGGATGAATCTTGTCCTATTAAAAAAGAGAAAGAAAAAGAAGAAAAAAAATGATGATTCTGAGTATCAAAATATCAAAATTTCATTGAAGAAAAGAAACACTAATGGACCATGGTAGGCGACCAAATGGGTGCTAACTAAAAGTTTATTTGGTAAAAATGATGTCAAGACCCACCCAACTGCTCTCACCGAATTAAAAAGCTTTGGCAAGACTGAGCAAAAACATAATTGTTTTATTGGGAAATAGCTTTAGGGGGAATTGATTAAATTAGTTAGAAGTTGTTTGCTCGGTTTGCTCCAATAGCTGAATGGTTCTGATTCTGATCACTTTTCTTTTCCCACATCAAAGCAGATTTCACACCCACCAGTTTTAACATTCAAAAACTTTATCATCACTCCAACCTAACTTTACTTGGCACTTTCACTTTCTCGGGGTGGAAAAATGGGAGCTGGAAAGCATATAGAACATGACGATCAGTAGTGACCTTGCGGATTCATCAGTTGCACAGAATTGATTCAACAACTTCCAAAAATTTCAAGGACAACTGATGTTAAAGAGGTGTTTACTGATGACTAAAATGAAACCAAAAGAAAGAAAAGTATCTTTGTTTTAGTAGTTTGTTCTTAATGGATTGAACTGTTTGTTGAGATGATTTGAATATGCAGATGGGTATCAATGAATCGAGGTGGATTCAGATCTGGGTTGATAGTTCAAATAGATCTGAAAATTCAACCATGAAAAGCTAGTTGGTAAATACCAAACTCCGGGCAGGAAGTTTCTAATAATTGACACTAGAATTGGACAGATAGGCTAATAATAACAATAAACCATTATTTAGACTGCATGAGTTGCAGTCAAATCCGTCCACTAGCAATTTGTGCAATTAAAGCAAAGTGGGTTTGATTCCAAAAGTCCCTTTCCAGTTCCACAGTCAAAATATGCTTAGAAAACAAATTGTATAAAACAGAGCCACAATCCACATCCAAAAAAAACCCTGTTTTTCTCTCTCAGGCATTTCCACAAACACCTTCCGTACGCAAATTTTTTTTTTCTTTTCCCCACTGAACACCCACTCTCTAACTTTCAAAGATTCCTTGATCTACCATAAACAATTCGATTATTAGGATTATCTGAGGAAAGAATCAGAGACATAGATCACATATGGGGGGGAAGAGGATGAATGAAACGGCGAGAAACTATTCACAAATGGAAAGCTTGTAAAAGTGGGTTTGAAGAAAATACCGAACCCAAATCCGGGTAATTGTATAATGGCTTTTGAGAATTGTTCGAAACCAAAAAAGCTAATTCACGTAATCCCTATCCCCTAAACTTAGAATTCGATTAATACTAATCCAATTCTTCAACCAAACGAAAAAAAAAAAAAAAAAAGTTACCTTTTCAATGGGCGCGCTCTTTTTTCCCTAAAAAAAGTTTGATTCATCCAAGAAAATCAAAAGCTTCTCTTCGATTCCTTCCCTTCCCTTTCTTCCATCTTCTCGGCAACTGT

Coding sequence (CDS)

ATGAATGCTGTAGGGTTCTTTCTGCTTTTCCTTTTCTCCCTTTTCTCTCATTCCTTTGTCCATGCCGCCCGTGTAACATTCCCGGAGCTGAAGCAATCTTCCAAAGCTGCGTATCTCCTACCCTCTCCGCCGCCTCCCAGTCCTCCGGCTGCATTCCTCTTCCTCTCGCCACCACCTCCTGCAAAACTCTTCTCAAGATCTTCGAAGCTTCCGCCTCCGAGTCCTCCCGCGGCCTTCCTGTTTCTGTCTCCGCCACCTCCTTCTGCGTTCCTGTATACCTCTCCGCCGCCCCCGGCGCAGGTGGCGGAATGA

Protein sequence

MNAVGFFLLFLFSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQVAE
Homology
[Close]
BLAST of Cmc03g0083601 vs. NCBI nr
Match: KGN62573.1 (hypothetical protein Csa_021860 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21
Identity = 73/105 (69.52%), Postives = 77/105 (73.33%), Query Frame = 0 

Query: 1   MNAVGFFLLF--LFSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPP 60
           MN VG FLLF  L S FSHS VHA      ELKQS+K+AYL  SPPPPS   AFL+LSPP
Sbjct: 1   MNGVGLFLLFLSLLSFFSHSSVHAR-----ELKQSAKSAYLFTSPPPPS---AFLYLSPP 60

Query: 61  PPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQVAE 104
           PPA+ F R S  PPPS   AFLFLSPPPPSAFLYTSPPPPA V E
Sbjct: 61  PPARRFLRQSSPPPPS---AFLFLSPPPPSAFLYTSPPPPASVVE 94

[Close]
BLAST of Cmc03g0083601 vs. NCBI nr
Match: XP_023520927.1 (extensin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 70/148 (47.30%), Postives = 82/148 (55.41%), Query Frame = 0 

Query: 1   MNAVGFFLLFLFSLFSHSFVHAARVTFPELKQS--SKAAYLLPSPPPPS-------PPAA 60
           MN VGFFLLF+FSLFSH F+ A   ++ ELK S  S +A+L  SPPPP+       PPAA
Sbjct: 1   MNLVGFFLLFIFSLFSHPFL-AIADSWSELKHSGRSLSAFLFTSPPPPARNFFKSPPPAA 60

Query: 61  FLFLSPPPPAKLFSRSS------------------KLPPPS------------------P 104
           FLF SPPPP + F +S                   K PPP+                  P
Sbjct: 61  FLFPSPPPPERSFFKSPPPEAFLFLSLPPPERSFFKSPPPAAFLFPSQTPPSQSFFKSPP 120

[Close]
BLAST of Cmc03g0083601 vs. NCBI nr
Match: KEH30231.1 (extensin-like region protein [Medicago truncatula])

HSP 1 Score: 58.9 bits (141), Expect = 2.9e-05
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 38  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPP 97
           Y+ PSPPPPSPP  +++ SPPPP  ++      PPPSPP  +++ SPPPP  ++Y SPPP
Sbjct: 305 YVYPSPPPPSPPPPYVYKSPPPPPYVYPSP---PPPSPPPPYIYKSPPPP-PYVYKSPPP 364

Query: 98  PAQV 102
           P  V
Sbjct: 365 PPYV 364

[Close]
BLAST of Cmc03g0083601 vs. NCBI nr
Match: XP_039688684.1 (extensin-2 [Medicago truncatula])

HSP 1 Score: 57.8 bits (138), Expect = 6.5e-05
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 38  YLLPSPPPPSPPAAFLFLSPPPPAKLFS------RSSKLPPPSPPAAFLFLSPPPPSAFL 97
           Y+ PSPPPPSPP  +++ SPPPP  +++      +S   P PSPP  +++ SPPPP  ++
Sbjct: 363 YVYPSPPPPSPPPPYIYKSPPPPPYVYTPPPYVYKSPPPPSPSPPPPYVYKSPPPP-PYV 422

Query: 98  YTSPPPPAQVAE 104
           Y SPPPP  V E
Sbjct: 423 YKSPPPPPYVYE 433

[Close]
BLAST of Cmc03g0083601 vs. NCBI nr
Match: XP_020531933.1 (extensin-2 isoform X1 [Amborella trichopoda])

HSP 1 Score: 57.8 bits (138), Expect = 6.5e-05
Identity = 32/71 (45.07%), Postives = 40/71 (56.34%), Query Frame = 0 

Query: 28  PELKQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPP 87
           P +K      Y  P PP PSPP  + + SPPPP   + +S   P PSPP  + + SPPPP
Sbjct: 165 PPVKTEPPYLYKSPPPPSPSPPPPYYYKSPPPPPPYYYKSPPPPSPSPPPPYYYKSPPPP 224

Query: 88  SAFLYTSPPPP 99
             + Y SPPPP
Sbjct: 225 PPYYYKSPPPP 235

[Close]
BLAST of Cmc03g0083601 vs. ExPASy Swiss-Prot
Match: O65375 (Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRX1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-04
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 41  PSPPPP----SPPAAFLFLSPPPPAKLFSRSSKLPPP----SPPAAFLFLSPPPPSAFLY 99
           PSPPPP    SPP  +++ SPPPP  ++  SS  PPP    SPP  +++ SPPPP  ++Y
Sbjct: 464 PSPPPPYVYSSPPPPYVYSSPPPPPYVY--SSPPPPPYVYSSPPPPYVYSSPPPP--YVY 523

[Close]
BLAST of Cmc03g0083601 vs. ExPASy TrEMBL
Match: A0A0A0LLD7 (Extensin_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361390 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.3e-22
Identity = 73/105 (69.52%), Postives = 77/105 (73.33%), Query Frame = 0 

Query: 1   MNAVGFFLLF--LFSLFSHSFVHAARVTFPELKQSSKAAYLLPSPPPPSPPAAFLFLSPP 60
           MN VG FLLF  L S FSHS VHA      ELKQS+K+AYL  SPPPPS   AFL+LSPP
Sbjct: 1   MNGVGLFLLFLSLLSFFSHSSVHAR-----ELKQSAKSAYLFTSPPPPS---AFLYLSPP 60

Query: 61  PPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPPPAQVAE 104
           PPA+ F R S  PPPS   AFLFLSPPPPSAFLYTSPPPPA V E
Sbjct: 61  PPARRFLRQSSPPPPS---AFLFLSPPPPSAFLYTSPPPPASVVE 94

[Close]
BLAST of Cmc03g0083601 vs. ExPASy TrEMBL
Match: A0A7N2MQ52 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 0 

Query: 28  PELKQSSKAAYLLPSPPP--PSPPAAFLFLSPPPPAKLFS-----RSSKLPPPSPPAAFL 87
           P L  S    Y+  SPPP  PSPP  +++ SPPPP+ LF      +S   PPPSPP  ++
Sbjct: 179 PPLSPSPPPPYIYKSPPPPSPSPPLPYIYKSPPPPSPLFPPPYVYKSPPPPPPSPPPPYI 238

Query: 88  FLSPPPPSA-----FLYTSPPPPA 100
           + SPPPPS+     ++Y SPPPP+
Sbjct: 239 YKSPPPPSSSPPPPYIYKSPPPPS 262

[Close]
BLAST of Cmc03g0083601 vs. ExPASy TrEMBL
Match: A0A072ULF8 (Extensin-like region protein OS=Medicago truncatula OX=3880 GN=MTR_4g065113 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 38  YLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFLYTSPPP 97
           Y+ PSPPPPSPP  +++ SPPPP  ++      PPPSPP  +++ SPPPP  ++Y SPPP
Sbjct: 305 YVYPSPPPPSPPPPYVYKSPPPPPYVYPSP---PPPSPPPPYIYKSPPPP-PYVYKSPPP 364

Query: 98  PAQV 102
           P  V
Sbjct: 365 PPYV 364

[Close]
BLAST of Cmc03g0083601 vs. ExPASy TrEMBL
Match: A0A396I8H9 (Putative Extensin domain-containing protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0032531 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.2e-05
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 38  YLLPSPPPPSPPAAFLFLSPPPPAKLFS------RSSKLPPPSPPAAFLFLSPPPPSAFL 97
           Y+ PSPPPPSPP  +++ SPPPP  +++      +S   P PSPP  +++ SPPPP  ++
Sbjct: 363 YVYPSPPPPSPPPPYIYKSPPPPPYVYTPPPYVYKSPPPPSPSPPPPYVYKSPPPP-PYV 422

Query: 98  YTSPPPPAQVAE 104
           Y SPPPP  V E
Sbjct: 423 YKSPPPPPYVYE 433

[Close]
BLAST of Cmc03g0083601 vs. ExPASy TrEMBL
Match: A0A7N2KKX8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.4e-05
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 38  YLLPSPPPPSPPAAFLFLSPPPPAKLFS-----RSSKLPPPSPPAAFLFLSPPPPSA--- 97
           Y  P PP PSPP  +++ SPPPP+ LF      +S   PPPSPP  +++ SPPPPS+   
Sbjct: 192 YKSPPPPSPSPPPPYIYKSPPPPSPLFPPPYVYKSPPPPPPSPPPPYIYKSPPPPSSSPP 251

Query: 98  --FLYTSPPPPA 100
             ++Y SPPPP+
Sbjct: 252 PPYIYKSPPPPS 263

[Close]
BLAST of Cmc03g0083601 vs. TAIR 10
Match: AT1G12040.1 (leucine-rich repeat/extensin 1 )

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-05
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 41  PSPPPP----SPPAAFLFLSPPPPAKLFSRSSKLPPP----SPPAAFLFLSPPPPSAFLY 99
           PSPPPP    SPP  +++ SPPPP  ++  SS  PPP    SPP  +++ SPPPP  ++Y
Sbjct: 464 PSPPPPYVYSSPPPPYVYSSPPPPPYVY--SSPPPPPYVYSSPPPPYVYSSPPPP--YVY 523

[Close]
BLAST of Cmc03g0083601 vs. TAIR 10
Match: AT1G26250.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 38  YLLPSPPPP------SPPAAFLFLSPPPPAKLFSRSSKLPPPSPPAAFLFLSPPPPSAFL 97
           Y+  SPPPP       PP  +++ SPPPP  ++S     PPP PP  +++ SPPPP  ++
Sbjct: 135 YVYSSPPPPPYVYSSPPPPPYVYKSPPPPPYVYS-----PPPPPP--YVYQSPPPP-PYV 194

Query: 98  YTSPPPPAQV 102
           Y+SPPPP  V
Sbjct: 195 YSSPPPPPYV 196

[Close]
BLAST of Cmc03g0083601 vs. TAIR 10
Match: AT2G43150.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04
Identity = 34/84 (40.48%), Postives = 42/84 (50.00%), Query Frame = 0 

Query: 28  PELKQSSKAAYLLPSPPPP--SPPAAFLFLSPPPPAK-----LFSRSSKLPPPSPPAAFL 87
           P   +S    Y   SPPPP  SPP  + + SPPPP K      +  S   P  SPP  +L
Sbjct: 126 PPPVKSPPPPYYYHSPPPPVKSPPPPYYYHSPPPPVKSPPPPYYYHSPPPPVKSPPPPYL 185

Query: 88  FLSP------PPPSAFLYTSPPPP 99
           + SP      PPP  ++Y SPPPP
Sbjct: 186 YSSPPPPVKSPPPPVYIYASPPPP 209

[Close]
BLAST of Cmc03g0083601 vs. TAIR 10
Match: AT1G26240.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0 

Query: 38  YLLPSPPPP------SPPAAFLFLSPPPPAKLFSRSSKLPPP-----SPPAAFLFLSPPP 97
           Y+  SPPPP       PP+ +++ SPPPP  ++  SS  PPP      PP  +++ SPPP
Sbjct: 345 YVYKSPPPPPYVYSSPPPSPYVYKSPPPPPYVY--SSPPPPPYVYKSPPPPPYVYSSPPP 404

Query: 98  PSAFLYTSPPPPAQV 102
           P  ++Y SPPPP  V
Sbjct: 405 P-PYVYKSPPPPPYV 416

[Close]
BLAST of Cmc03g0083601 vs. TAIR 10
Match: AT4G08370.1 (Proline-rich extensin-like family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04
Identity = 31/75 (41.33%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 31  KQSSKAAYLLPSPPPPSPPAAFLFLSPPPPAKLFSRSSKLPP----PSPPAAFLFLSPPP 90
           K    + YL  SPPPP     +++ SPPPP      S   PP      PP  F++ SPPP
Sbjct: 53  KSPPPSPYLYSSPPPP----PYVYNSPPPPPPYIYNSPPRPPYVYKSPPPPPFVYSSPPP 112

Query: 91  PSAFLYTSPPPPAQV 102
           P+ ++Y SPPPP  V
Sbjct: 113 PT-YIYNSPPPPPYV 122

The following BLAST results are available for this feature:
BLAST of Cmc03g0083601 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62573.11.3e-2169.52hypothetical protein Csa_021860 [Cucumis sativus][more]
XP_023520927.13.5e-1447.30extensin-like [Cucurbita pepo subsp. pepo][more]
KEH30231.12.9e-0551.56extensin-like region protein [Medicago truncatula][more]
XP_039688684.16.5e-0547.22extensin-2 [Medicago truncatula][more]
XP_020531933.16.5e-0545.07extensin-2 isoform X1 [Amborella trichopoda][more]
BLAST of Cmc03g0083601 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O653752.0e-0450.00Leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
BLAST of Cmc03g0083601 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLD76.3e-2269.52Extensin_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G361390 ... [more]
A0A7N2MQ521.1e-0545.24Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A072ULF81.4e-0551.56Extensin-like region protein OS=Medicago truncatula OX=3880 GN=MTR_4g065113 PE=4... [more]
A0A396I8H93.2e-0547.22Putative Extensin domain-containing protein OS=Medicago truncatula OX=3880 GN=Mt... [more]
A0A7N2KKX85.4e-0547.22Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
BLAST of Cmc03g0083601 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G12040.11.4e-0550.00leucine-rich repeat/extensin 1 [more]
AT1G26250.11.6e-0444.29Proline-rich extensin-like family protein [more]
AT2G43150.12.0e-0440.48Proline-rich extensin-like family protein [more]
AT1G26240.12.6e-0442.67Proline-rich extensin-like family protein [more]
AT4G08370.12.6e-0441.33Proline-rich extensin-like family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc03g0083601.1Cmc03g0083601.1mRNA