Cmc03g0062571 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0062571
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-CH-type domain-containing protein
Location	CMiso1.1chr03: 2837756 .. 2840445 (-)
RNA-Seq Expression	Cmc03g0062571
Synteny	Cmc03g0062571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCAGGATTTGCCATCTGAGTTTGGATGCTTCTAATCATGAATCTGGAATTCCTATTGAGTTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATGTAAGTTTTTTAAAATTGAATAACACCTAATGTTTCTTGCTTTCAAGTTTCGCTTCTTGTCTTCATTTACTTTTCAATTCATTGGATATAATGATTGCCACTATAAACATGCCTGGAATCCGGAGTACCAACCTTGTTTTCTTGATTTAATCTTGTAGTTCAAATTTCCTTATTCCTCATAGTGTTTTAGTTTTTATTTTAGTGGTATTTTTCTCTTTTCTGACTACTCTTGAAGTTTGTCTTCTACTTAAAAAGTTGTGGGCATGTGGTTGACTTCTGTTACTCTTGGTGTTTTAGTAATGTTAAAGAATGTGGCTTCTATTTGTGTTTGGCCGTGTCAAGATAGCCTTCTTTGACTAAAAAGGACTAATTCCTGACCTTGTGTTTTCAAAACAGTAATCCAAATGCTAAAGAATTGAGACTATGTAGTCATCTTTATTTTTGCTTCTCCCTTGTGGAAATAGTGGTGCCATTATAAATCCATCAAGCCTTTTATAGAATCCATGTATTCGTTTCCTGTTAAAGATCAAAGCCAAAACGCAATGTTTTTCTTTGTCAAAACGAAGAGAAGTTGGATTTTGCATTGGACGATATGAGACCGAGATGGCATTTGATTTAGGAGAGAACTGCTCTCGGATTGGAGGTGTTTCTTGATGTAGCACTCTTGCCTTCGTCTTGTAGAAAAGGCTCATTCCTTTAGCCTATAATTTGCTTGCTTTAGTCTGATGTATTATTGATTAGAGCACGTTTCTGCTGAGTTCAAATGTTTGAATATTCTTTCTTAGCATGTTGTGTCTTTGTTTTTGCCTTTCTGGTCAGCTGCAGTGTGAAGTTTGAAACAATGGAGAAAATATTCATAACTTTTGCTACATATTCTTTATTACTTCATTACATGATGTTGGTATCTACAAAAATATATGGAATCAACATTTATTCCTAAAAAGACCAATCAGTGAGATTCTTTTTTCCTTGTTAACCATTTCTTTATCAGTTCACACTGTCCTACAGAAGATGTTGCGAAGATTAGTACATATATTATTTATGATACAATATAGATTGGTTTTGTTTTGAGTTTCGAACATCTTTCTTTGAGGTTTAACCTATATTTACATTTTCACAAGTTCCGTGATCGGCATAGCTATCAATATTCGTATCATCCTTTGTTCAGAATGTATTTAAACTTGTATGGACAAAGTTAGAGCTTCAGTCTGAGGTTGATTGTTATTTCATTTCACCACTCTCAAATCACCATTCAAGACTGTGAAGCTATTTTGTCTGTCGAATACTTCACGGTATCAAACATTCATCTCCCATAGAACCTAGGAAACACATTTAAATTTATAGATAAGAGATACAATATTTGAACATGGTTATTTCCTCATTCATTATACTGTAACCTGAATTAAGCATCGCTATCTGAAACCTCTTTTCATTGTCAAATTTGTTGATTGATTAAAGCTTATTACATACAGATGACGGTCAAAGGGTCTGTAGACTGTAAGAAGCCAAAAAACTATCTTCACTATATCTTCTGCATAGGTTGAACATATTTTTCCCATGATGAATCTATGAGCGTATTGAAAGAATTGAATTGTAATAGTCGGTCTGTGAAGAACTTTATTGCGTTTGACCCTGCTAGCAAACATATATAGTTTGGCCAGGAAAACTTTTCACTATTAGAGAGCGTTCTATAAAACTTGATTGTGATTCATGTTGTTCTTTTAGCTGACTTTGGTGTTTGAAGTAATTTGAAAAGTTATGTTATCTGGAATAAAAGACGGGGGGAAAAGCAAATACTGTTCAAACTTGGAAAAGCTCAACATGTACCTTGCACTGACCCATGTGTAATTTGTTACAGCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTACGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCCATAGTGATGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAAGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGTTATTTCACTTCAAAATACCCTCATAATTATGAAAAAGAAAACTATATTTGAAAAGTAGCATCAAAAGATTGTCGAAAATCTTCATCGGGCTCTCTTCATTCTGCAATGCAGCCACTGAAACAAACTCGAAAGATCAACTATATTGCACGGTTACAGGCTTGGGATTGTGATTACAAATATTCTGTTAATATATATTAGTGTTAGAGAACCTTGGAGGAAGAGTTTGGCCTTTGTAACAAGTAAGATGTATAATGAAATTGTTTGTAAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCATCTCAATTGTTCGTGCTGTTTGTCTCTTGTCGTTTCATTGTGGATAATTCTCTGTGGAGATTCCGACATGTAGTTCCTTCTATAACAACAAAATCGGATTTG

mRNA sequence

ATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCAGGATTTGCCATCTGAGTTTGGATGCTTCTAATCATGAATCTGGAATTCCTATTGAGTTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATTTTGTCTTCTACTTAAAAAGTTGTGGGCATGTGGTTGACTTCTGTTACTCTTGGTGTTTTAGTAATGTTAAAGAATGTGGCTTCTATTTGTGTTTGGCCGTGTCAAGATAGCCTTCTTTGACTAAAAAGGACTAATTCCTGACCTTGTGTTTTCAAAACAGTAATCCAAATGCTAAAGAATTGAGACTATGTAGTCATCTTTATTTTTGCTTCTCCCTTGTGGAAATAGTGGTGCCATTATAAATCCATCAAGCCTTTTATAGAATCCATGTATTCGTTTCCTGTTAAAGATCAAAGCCAAAACGCAATGTTTTTCTTTGTCAAAACGAAGAGAAGTTGGATTTTGCATTGGACGATATGAGACCGAGATGGCATTTGATTTAGGAGAGAACTGCTCTCGGATTGGAGGTGTTTCTTGATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTACGAAGCCGATTCAACAGAGCAACGCAATGAACCAAACGAAGCAACAACAGCAACTGCTACAGCTGCCATAGTGATGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAAGGCCACAGCCACTGAAACAAACTCGAAAGATCAACTATATTGCACGGTTACAGGCTTGGGATTGTGATTACAAATATTCTGTTAATATATATTAGTGTTAGAGAACCTTGGAGGAAGAGTTTGGCCTTTGTAACAAGTAAGATGTATAATGAAATTGTTTGTAAGTTTATATTGTATTATTGGGCTCAGCCTAGCTGGATTGGCCATCTCAATTGTTCGTGCTGTTTGTCTCTTGTCGTTTCATTGTGGATAATTCTCTGTGGAGATTCCGACATGTAGTTCCTTCTATAACAACAAAATCGGATTTG

Coding sequence (CDS)

ATGGATCTCGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCAGGATTTGCCATCTGAGTTTGGATGCTTCTAATCATGAATCTGGAATTCCTATTGAGTTGGGTTGTTCTTGTAAAGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGGCTTGGTTCAAGATTAAGGGCGACATTTTGTCTTCTACTTAA

Protein sequence

MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDILSST

Homology

[Close]

BLAST of Cmc03g0062571 vs. NCBI nr
Match: XP_008441426.1 (PREDICTED: uncharacterized protein LOC103485546 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 128 FKIKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. NCBI nr
Match: KAA0041505.1 (E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa] >TYK24378.1 E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 4.3e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 128 FKIKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. NCBI nr
Match: XP_004138437.1 (uncharacterized protein LOC101207404 [Cucumis sativus] >KGN45763.1 hypothetical protein Csa_004857 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 9.6e-32
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 128 FKIKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. NCBI nr
Match: XP_022133648.1 (uncharacterized protein LOC111006186 [Momordica charantia])

HSP 1 Score: 146.4 bits (368), Expect = 9.6e-32
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIERDCRICHLSLD+SNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 55  MDLECGLAEIKVHLAKIERDCRICHLSLDSSNHESGIPIELGCSCKDDLAAAHKHCAEAW 114

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 115 FKIKGDI 121

[Close]

BLAST of Cmc03g0062571 vs. NCBI nr
Match: KAG6602635.1 (hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.3 bits (360), Expect = 8.2e-31
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 70  MDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAHKHCAEAW 129

Query: 61  FKIKGDI 68
           FK+KGDI
Sbjct: 130 FKVKGDI 136

[Close]

BLAST of Cmc03g0062571 vs. ExPASy TrEMBL
Match: A0A5A7TJA4 (E3 ubiquitin-protein ligase MARCH8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001630 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 128 FKIKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. ExPASy TrEMBL
Match: A0A1S3B429 (uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 128 FKIKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. ExPASy TrEMBL
Match: A0A0A0K8G0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009420 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 128 FKIKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. ExPASy TrEMBL
Match: A0A6J1BZQ7 (uncharacterized protein LOC111006186 OS=Momordica charantia OX=3673 GN=LOC111006186 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-32
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGLAEIKVHLAKIERDCRICHLSLD+SNHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 55  MDLECGLAEIKVHLAKIERDCRICHLSLDSSNHESGIPIELGCSCKDDLAAAHKHCAEAW 114

Query: 61  FKIKGDI 68
           FKIKGDI
Sbjct: 115 FKIKGDI 121

[Close]

BLAST of Cmc03g0062571 vs. ExPASy TrEMBL
Match: A0A6J1JQX9 (uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-31
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           MDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCKDDLAAAHKHCAEAW
Sbjct: 68  MDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAHKHCAEAW 127

Query: 61  FKIKGDI 68
           FK+KGDI
Sbjct: 128 FKVKGDI 134

[Close]

BLAST of Cmc03g0062571 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 2.9e-26
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAW 60
           +DLE GL E  VHL++ ERDCRICH+SLDA+N ESG+PIELGCSCK DLAAAHKHCAE W
Sbjct: 59  IDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETW 118

Query: 61  FKIKGD 67
           FKIKG+
Sbjct: 119 FKIKGN 124

[Close]

BLAST of Cmc03g0062571 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 18  ERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGD 67
           E+DCRICHL L++S HE G P+ LGCSCKDDL   HK CA+ WFKIKG+
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGN 123

[Close]

BLAST of Cmc03g0062571 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 18  ERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGD 67
           E+DCRICHL L++S HE G P+ LGCSCKDDL   HK CA+ WFKIKG+
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGN 123

[Close]

BLAST of Cmc03g0062571 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 5.1e-15
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 18  ERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGD 67
           E+DCRICHL ++ S    G  IELGCSCKDDLA AH+ CAE WFKIKGD
Sbjct: 81  EKDCRICHLGVETS---GGGAIELGCSCKDDLAVAHRQCAETWFKIKGD 126

[Close]

BLAST of Cmc03g0062571 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 5.9e-11
Identity = 29/56 (51.79%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 18  ERDCRICHLSLDASNHESGIP-------IELGCSCKDDLAAAHKHCAEAWFKIKGD 67
           ER CRICH   D S   SG         IE+GC CK++L  AH HCAEAWFK++G+
Sbjct: 99  ERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGN 154

The following BLAST results are available for this feature:

BLAST of Cmc03g0062571 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441426.1	4.3e-32	100.00	PREDICTED: uncharacterized protein LOC103485546 [Cucumis melo]	[more]
KAA0041505.1	4.3e-32	100.00	E3 ubiquitin-protein ligase MARCH8 [Cucumis melo var. makuwa] >TYK24378.1 E3 ubi...	[more]
XP_004138437.1	9.6e-32	98.51	uncharacterized protein LOC101207404 [Cucumis sativus] >KGN45763.1 hypothetical ...	[more]
XP_022133648.1	9.6e-32	98.51	uncharacterized protein LOC111006186 [Momordica charantia]	[more]
KAG6602635.1	8.2e-31	94.03	hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc03g0062571 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc03g0062571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJA4	2.1e-32	100.00	E3 ubiquitin-protein ligase MARCH8 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B429	2.1e-32	100.00	uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=...	[more]
A0A0A0K8G0	4.7e-32	98.51	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00942...	[more]
A0A6J1BZQ7	4.7e-32	98.51	uncharacterized protein LOC111006186 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JQX9	3.9e-31	94.03	uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535...	[more]

BLAST of Cmc03g0062571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	2.9e-26	77.27	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	1.2e-16	67.35	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.2e-16	67.35	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	5.1e-15	69.39	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	5.9e-11	51.79	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 20..67 e-value: 7.0E-9 score: 45.5
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 21..63 e-value: 4.3E-8 score: 33.2
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 13..71 score: 12.861756
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 8..70 e-value: 4.9E-11 score: 44.0
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 2..66
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 2..66
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 18..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0062571.1	Cmc03g0062571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0008270	zinc ion binding