Cmc03g0060541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0060541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	gibberellin-regulated protein 9
Location	CMiso1.1chr03: 812363 .. 815056 (-)
RNA-Seq Expression	Cmc03g0060541
Synteny	Cmc03g0060541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTCCCTTTTAACACTTAATGGCAGGAAGAAGACAATAAAAATTAAAAAAAAAAAAAAAAAACAAATAATATATGTAAATTAAAGGACAAATATGTAATTTTACTCGTTTTTGTCTTGAGATGGAAAAAGAAAAACCCATATACATTGGAGAGGCATTGCACCTATATATATCCCACCATCTTCGCCACCTGAGTTCATCAATCAAATTATCTTTTCAGACATATCCTTTTAGAGAAATGAAGCCACTCAGTCTTCTTTGCATTTTCATTATTCTTTCCTTTCTCCTGCAGGTAATATTTCTATTTTTATGTATATATATTTTTTACATGTTTACATTTTTATTTAACAAATTTCATTTAATGAATTTAATTCTTTTATGCATTTTGTTGTAGGGTTTTTCAGAGGCTATCACTACTGTGAGTGTTCACCATCCATATTATATATCTCTTACTTTACTTTTTACCTTTCCATCATTACCTTTTCTATGTTTTGCAATCCATTGAATTGAAATTTTGAGATTATTGTTAAGGCTTATTATATCTAATAATTGTTGGAAACAACCACCACTTAACAACTCCAACTTGTTATTCTAATCTCTTAAAAGTTATTGGAGTGGACTACCTCACTCGGCTCTAATTAACTTGTCGTTTTAAACTATATATCATATTTTACAATTGACTATAACATCAGTATTTTGAAACCCTATTTGCTACATTACTAACTATTTTTTACAGTATTTACTATATTTACCCAGACTAAAATAATATACACCTCAAGCACATACAATTTTACGAGACTAAAATAGTTTATACCCAAACACGAACAATTACGATCTATAAACTATTATACTTCACAAACTTTAATAACTCTACTCTACATACCCCTTAATCATTGAAATTAATTTGGTCGAGTAGGGTTTAACATCGCAAGAGTATCAAGGAACGAGATACAATTTCGGCTTAATATATAAGAAAAATGATGAGCATATAAACATAGTTTGAACAAATGAAGAGTTAAAGAAGAATATATGGGATTTCTAAGCCTAGTTCTCAACCTTAACTAATTAAGCTAAAGTCATGATAACATGTCCTAAATAATTAGGAAAACAAAAAGTTAGGTGAATGAAAATAATTATAACAATCATATGAATACTGACATTATATTGGATTCAGGTGGATGCAGGGACCAATACAGTAGCACTCAGCAAAAAGTATCACTATCAGCCAAAAATCAGTAAGTTGCCATAAAATATAATAATAGTAATAATACATATAGAGAATTACAAATTTATTCTTTCAACTTAAATGAGTGTTAGAATAGGTTTTCAAATCGTAAGTTAGTCAAATAGGTCTTTAAACTTTCAATTAATATAGGTATAACCTATTTAAATTTTAGGACGGTCAAATAAGTCTTTAAACTTTCGATTAATATAGGTATAAATTATTGTTTTCTGCATCCTTGAAATTGTAATTTTTAAATTAGCAATTCTACGGAGAGTGAATTTTGTATCTAATAGAACATTAAACTTTTAATTTGTAGTCATATTTAAAAAAAAAAAAAACAAAAACCAAATGGTTATCGAACGCGATTTTCAAAAACCTTAATATAAAATAGATAACAAAACAATAAAAATTGGTGCAAAATGGGTATTGTTTATATGCTTAATTTTCAAAAAACAAAAAATTACAAAACGGAACTATAGTTTTCAAAAACTTCTTTTCATTCATACAATTTGACAAAAGTTTCAAGTGGTTCTTGAAGAAATCTGAAAATAACCGTAAGCAATTTAGGAGAAAACAAGCATAAACGTCAAGAACAAAATAGTCACCCAACGGAGATTTTAAAAACTAAACACGTAACAGAACATTTTTTTTTCTTTTTTTATATAAAGAAACTTATAACACAAAATTTGGAGTGAAATTAACAATCAGGTTGGGTTGAATTGGTTTGGGGTAGATTGCAAAAGTGAATGTTCAAGGAGATGCAGCAAAGTGTTCAGAAAGAAGATATGTATGCGTGCTTGTGGGACTTGCTGCAGTCGGTGTCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCATGGCAATAAGCCCAAGTGCCCCTAATTTCCACTCTACTCTTCCAACCCTACTTCTACACTATTTCCTTTTATATATTGGAGGTCATTTAATTCTTTGTATTTTCCATTTATGTTTATATACTATTAATGTGTATAAAAATGCCAAGGTGAGCATTGCTCATCTGGCATATAAATGTGTTATTGATCAAGATGTTTCAACCTTCCAGTTAAGACAACTCATTAGCCTTAATTGGATTTTGGGTTTGAGTATCTTGATTTCCTTCTCAAAATTCATTATGTTATGGAATTCTTCTAGAAGGATTCCTTCTGTTAATGATGATAATTTATTGTGGGTGAGTGTATTTTGCAAGAGTTTTCCTCCCAGGCCAACTATATAGGATTGGTGTTATTTACCTATCAATATATTGAAGCCAAGGGTTTCTCTTGCATTCTCTCTTTTTGATTATGTTGATTTTCCCACCTCTGTTGTACTATATCTAAGTGGCTTGTGTTGCTTACAATTGGAATAAAAATCAGTGCTGTATTTTTTTCCATAAGGACCAATTTTCTAATTGATAATATATTTAAGTGATCTTT

mRNA sequence

CTCTCTTCCCTTTTAACACTTAATGGCAGGAAGAAGACAATAAAAATTAAAAAAAAAAAAAAAAAACAAATAATATATGTAAATTAAAGGACAAATATGTAATTTTACTCGTTTTTGTCTTGAGATGGAAAAAGAAAAACCCATATACATTGGAGAGGCATTGCACCTATATATATCCCACCATCTTCGCCACCTGAGTTCATCAATCAAATTATCTTTTCAGACATATCCTTTTAGAGAAATGAAGCCACTCAGTCTTCTTTGCATTTTCATTATTCTTTCCTTTCTCCTGCAGGGTTTTTCAGAGGCTATCACTACTGTGGATGCAGGGACCAATACAGTAGCACTCAGCAAAAAGTATCACTATCAGCCAAAAATCAATTGCAAAAGTGAATGTTCAAGGAGATGCAGCAAAGTGTTCAGAAAGAAGATATGTATGCGTGCTTGTGGGACTTGCTGCAGTCGGTGTCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCATGGCAATAAGCCCAAGTGCCCCTAATTTCCACTCTACTCTTCCAACCCTACTTCTACACTATTTCCTTTTATATATTGGAGGTCATTTAATTCTTTGTATTTTCCATTTATGTTTATATACTATTAATGTGTATAAAAATGCCAAGGTGAGCATTGCTCATCTGGCATATAAATGTGTTATTGATCAAGATGTTTCAACCTTCCAGTTAAGACAACTCATTAGCCTTAATTGGATTTTGGGTTTGAGTATCTTGATTTCCTTCTCAAAATTCATTATGTTATGGAATTCTTCTAGAAGGATTCCTTCTGTTAATGATGATAATTTATTGTGGGTGAGTGTATTTTGCAAGAGTTTTCCTCCCAGGCCAACTATATAGGATTGGTGTTATTTACCTATCAATATATTGAAGCCAAGGGTTTCTCTTGCATTCTCTCTTTTTGATTATGTTGATTTTCCCACCTCTGTTGTACTATATCTAAGTGGCTTGTGTTGCTTACAATTGGAATAAAAATCAGTGCTGTATTTTTTTCCATAAGGACCAATTTTCTAATTGATAATATATTTAAGTGATCTTT

Coding sequence (CDS)

ATGGAAAAAGAAAAACCCATATACATTGGAGAGGCATTGCACCTATATATATCCCACCATCTTCGCCACCTGAGTTCATCAATCAAATTATCTTTTCAGACATATCCTTTTAGAGAAATGAAGCCACTCAGTCTTCTTTGCATTTTCATTATTCTTTCCTTTCTCCTGCAGGGTTTTTCAGAGGCTATCACTACTGTGGATGCAGGGACCAATACAGTAGCACTCAGCAAAAAGTATCACTATCAGCCAAAAATCAATTGCAAAAGTGAATGTTCAAGGAGATGCAGCAAAGTGTTCAGAAAGAAGATATGTATGCGTGCTTGTGGGACTTGCTGCAGTCGGTGTCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCATGGCAATAAGCCCAAGTGCCCCTAA

Protein sequence

MEKEKPIYIGEALHLYISHHLRHLSSSIKLSFQTYPFREMKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP

Homology

[Close]

BLAST of Cmc03g0060541 vs. NCBI nr
Match: XP_008441216.1 (PREDICTED: gibberellin-regulated protein 9 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 6.7e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 99
           MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 60

Query: 100 RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cmc03g0060541 vs. NCBI nr
Match: XP_004138815.1 (gibberellin-regulated protein 9 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 99
           MKPLSLLCIFIILSFLLQGFSEAI TVD GTNTVAL+KKYHYQPKINCKSECSRRCSKVF
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAIATVDEGTNTVALTKKYHYQPKINCKSECSRRCSKVF 60

Query: 100 RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cmc03g0060541 vs. NCBI nr
Match: XP_038885058.1 (gibberellin-regulated protein 9-like [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.6e-52
Identity = 99/106 (93.40%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 99
           MKPLSLLCIFIILS LLQGFSEA TTVD GTNTVAL+KKYHY PKINCK ECSRRCSKVF
Sbjct: 1   MKPLSLLCIFIILSILLQGFSEAFTTVDEGTNTVALTKKYHYHPKINCKRECSRRCSKVF 60

Query: 100 RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARL+THGNKPKCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLKTHGNKPKCP 106

[Close]

BLAST of Cmc03g0060541 vs. NCBI nr
Match: XP_023550961.1 (gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 2.5e-42
Identity = 83/107 (77.57%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 39  EMKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKV 98
           EMKPLS+LC F++L   LQG SEA T V+ GTNT AL+KK+ Y PKINCK  CSRRC KV
Sbjct: 20  EMKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKV 79

Query: 99  FRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
            RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGN+ KCP
Sbjct: 80  RRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 126

[Close]

BLAST of Cmc03g0060541 vs. NCBI nr
Match: XP_022993114.1 (gibberellin-regulated protein 9-like [Cucurbita maxima])

HSP 1 Score: 182.6 bits (462), Expect = 2.5e-42
Identity = 84/107 (78.50%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 39  EMKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKV 98
           EMKPLS+LC F++L   LQG SEA T V+ GTNT AL KK+ Y PKINCK  CSRRC KV
Sbjct: 20  EMKPLSVLCTFVLLLLFLQGLSEASTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKV 79

Query: 99  FRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
            RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGNK KCP
Sbjct: 80  RRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Cmc03g0060541 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 43  LSLLCIFIILSFLLQGFS-------EAITTVDAGTNTVALSKKYHYQPKINCKSECSRRC 102
           ++L+  F++LS +L   S        +++  +    T A  + YH++P+INC   C+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 103 SKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           SK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cmc03g0060541 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.6e-20
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 50  IILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICMRACG 109
           ++LS LL    ++I T    +N  A+S+  +   KI+C   C+ RC    R ++C RACG
Sbjct: 11  LLLSLLLLEQVQSIQTDQVTSN--AISEAAYSYKKIDCGGACAARCRLSSRPRLCNRACG 70

Query: 110 TCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           TCC+RC+CVPPGT GN + CPCYA L THGNK KCP
Sbjct: 71  TCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Cmc03g0060541 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-18
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 77  KKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLR 136
           KK  Y  KI+C S C  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 137 THGNKPKCP 146
           THG + KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of Cmc03g0060541 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.4e-18
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 83  PKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKP 142
           PKI+C S C  RCS   R  +C RACGTCC+RC+CV PGT GN+  CPCY  L THG + 
Sbjct: 32  PKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRR 91

Query: 143 KCP 146
           KCP
Sbjct: 92  KCP 94

[Close]

BLAST of Cmc03g0060541 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-18
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 84  KINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPK 143
           KI+C   C  RCSK  R K+C+RAC +CCSRC+CVPPGT GN   CPCYA + THG + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 144 CP 146
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Cmc03g0060541 vs. ExPASy TrEMBL
Match: A0A1S3B2G6 (gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 99
           MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 60

Query: 100 RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cmc03g0060541 vs. ExPASy TrEMBL
Match: A0A0A0LMS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.0e-54
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 99
           MKPLSLLCIFIILSFLLQGFSEAI TVD GTNTVAL+KKYHYQPKINCKSECSRRCSKVF
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAIATVDEGTNTVALTKKYHYQPKINCKSECSRRCSKVF 60

Query: 100 RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cmc03g0060541 vs. ExPASy TrEMBL
Match: A0A6J1JZB3 (gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.2e-42
Identity = 84/107 (78.50%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 39  EMKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKV 98
           EMKPLS+LC F++L   LQG SEA T V+ GTNT AL KK+ Y PKINCK  CSRRC KV
Sbjct: 20  EMKPLSVLCTFVLLLLFLQGLSEASTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKV 79

Query: 99  FRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
            RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGNK KCP
Sbjct: 80  RRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Cmc03g0060541 vs. ExPASy TrEMBL
Match: A0A6J1FFC2 (gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.8e-42
Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 99
           MKPLS+LC F++L   LQG SEA T V+ GTNT AL KK+ Y PKINCK  CSRRC KV 
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKVR 60

Query: 100 RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGN+ KCP
Sbjct: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Cmc03g0060541 vs. ExPASy TrEMBL
Match: A0A6J1DG94 (gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.8e-37
Identity = 76/109 (69.72%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 40  MKPLSLLCIFIILSFLLQGFSEA---ITTVDAGTNTVALSKKYHYQPKINCKSECSRRCS 99
           MKP+S L I ++L FLLQ  SEA    +TV+ G+N VA+ KK+   PKINCK  CSRRC 
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 100 KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+TH NKPKCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Cmc03g0060541 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.1e-27
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 43  LSLLCIFIILSFLLQGFS-------EAITTVDAGTNTVALSKKYHYQPKINCKSECSRRC 102
           ++L+  F++LS +L   S        +++  +    T A  + YH++P+INC   C+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 103 SKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           SK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cmc03g0060541 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.1e-27
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 43  LSLLCIFIILSFLLQGFS-------EAITTVDAGTNTVALSKKYHYQPKINCKSECSRRC 102
           ++L+  F++LS +L   S        +++  +    T A  + YH++P+INC   C+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 103 SKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           SK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cmc03g0060541 vs. TAIR 10
Match: AT1G22690.3 (Gibberellin-regulated family protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.1e-27
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 43  LSLLCIFIILSFLLQGFS-------EAITTVDAGTNTVALSKKYHYQPKINCKSECSRRC 102
           ++L+  F++LS +L   S        +++  +    T A  + YH++P+INC   C+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 103 SKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 146
           SK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cmc03g0060541 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 77  KKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLR 136
           KK  Y  KI+C S C  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 137 THGNKPKCP 146
           THG + KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of Cmc03g0060541 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 77  KKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLR 136
           KK  Y  KI+C S C  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 29  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 88

Query: 137 THGNKPKCP 146
           THG + KCP
Sbjct: 89  THGGRRKCP 97

The following BLAST results are available for this feature:

BLAST of Cmc03g0060541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441216.1	6.7e-56	100.00	PREDICTED: gibberellin-regulated protein 9 [Cucumis melo]	[more]
XP_004138815.1	2.2e-54	97.17	gibberellin-regulated protein 9 [Cucumis sativus]	[more]
XP_038885058.1	2.6e-52	93.40	gibberellin-regulated protein 9-like [Benincasa hispida]	[more]
XP_023550961.1	2.5e-42	77.57	gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022993114.1	2.5e-42	78.50	gibberellin-regulated protein 9-like [Cucurbita maxima]	[more]

BLAST of Cmc03g0060541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK5	1.3e-25	48.18	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]
Q93X17	3.6e-20	50.00	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	1.5e-18	59.42	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
F4IQJ4	4.4e-18	60.32	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46688	5.8e-18	61.29	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]

BLAST of Cmc03g0060541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2G6	3.3e-56	100.00	gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=...	[more]
A0A0A0LMS4	1.0e-54	97.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1	[more]
A0A6J1JZB3	1.2e-42	78.50	gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231...	[more]
A0A6J1FFC2	7.8e-42	77.36	gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE...	[more]
A0A6J1DG94	9.8e-37	69.72	gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 P...	[more]

BLAST of Cmc03g0060541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22690.1	9.1e-27	48.18	Gibberellin-regulated family protein	[more]
AT1G22690.2	9.1e-27	48.18	Gibberellin-regulated family protein	[more]
AT1G22690.3	9.1e-27	48.18	Gibberellin-regulated family protein	[more]
AT1G75750.1	1.1e-19	59.42	GAST1 protein homolog 1	[more]
AT1G75750.2	1.1e-19	59.42	GAST1 protein homolog 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 86..145 e-value: 1.7E-21 score: 76.1
None	No IPR available	PANTHER	PTHR23201:SF20	GIBBERELLIN-REGULATED PROTEIN 9	coord: 56..145
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 56..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0060541.1	Cmc03g0060541.1	mRNA