Cmc02g0055611 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0055611
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	DNA mismatch repair protein MSH2
Location	CMiso1.1chr02: 22299757 .. 22307360 (-)
RNA-Seq Expression	Cmc02g0055611
Synteny	Cmc02g0055611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAGCCGGGAGCGTACTTCCGAACGCGCGAGTAGTCTCAGTTTCCCGCCACTACCATCGGCACTCAACCGAATGTAAAACTCATCGCCAAGCTTTTCAGGTTCCAAGGATTTTTCATTAAGGAAAAGGGCAAAGGAGAAGGAAAAAAGGGGAAGAAAAGCCATAATCGTAAGCTTCAAAGCGAATGGATGACAACGTTGATGAGCGAAGCAAACTTCCCGAGCTCAAACTTGGTACACTCTACATAATCATTATTTTTCTTTTTTCTGTTTCTCTATTTGCACATTGGGTTTTCCAGTTTTTTTTTTTTTTTTTTTTCTTTTTCTTTTTAATCCATTTGGTTGAAAATGATGACAGATGCTAAGCAGGCTCAAGGGTTTCTAGCGTTCTTCAAAACCCTACCCCCTGTAAGTTCATTTTGCAAGTTGGTTTCGCACTATCAGAGCTGAAATTGGTGTTATTTGTTGTTGTTACTGGACTTAAGTCCCTAGCGACATGGGATAGAAGGACATTAACTGGATGCTTGATTATTTATACTAGAACAAGCTTATTCTTGTAATATTTCGGACTGTCAGAATTATTTAGAAACTCCTTTAGACGAGGCAATGGAATGTGATTTATTTTAATTTCATTTTTGTGCTGCAGGACTCAAGAGCTGTTCGATTTTTTGATCGTCGGGTTAGTTATTCAATCTTCATTAGGCCATCACTTGGTATTGTGTGAATGAAATATATTCGGTTGGCTTTTCTTTCTGCTTATCATCTATGTGAAGCAATTTGCGTGTTATCAAACTGAAATGTCATTTCTTCGTATATATCCTTAAGAAGCTGGAATTGGATATGTTTTCGTTCACAAAACACATGCATATGTTATTTATCTTATTTTGTTTTTTCTGGTGGGATGAGATGAAGAGGCTCTTTCGTTTTAGTTTCCAGTTAATCAGTATTCTTGATTTAAATAATTCCTGCGTGGAATAGATTCCTTGGCTATCTTGAGTTTCATCAGATTCTCTCATTTCTAAGGATTGTAGTCTTGAGTTTCATTAGATTCTCTCATTTCTAAGGATCGTAGTCTTTTATCACAAGAAAATAGTATCCTTTTTGTTTAAGAAATAATGATCATACAGGATTACTATACTGCCCATAGCGATAATGCAGTTTTCATTGCAAAGACCTATTACCGTACTACGACTGCTTTGCGGCAACTGGGCAATGCATCTGAATCCCTTTCTAGTGTGAGTGTTAGCAAAAATATGTTCGAATCCATTGCTCGAGATCTTCTTTTGGAAAGAACAGACCATACACTGGAGCTTTATGAGGGTAGTGGTTCGAATTGGAGATTGATCAAAAGTGGATCACCTGGCAATATTGGAAGTTTTGAAGATGTTTTGTTTGCAAATAATGAAATGCAGGATAGTCCTGCTATTGTGGCACTGTTTCCATACTTCAGAGATAATGGGTGCATTGTTGGACTAGGCTATGTTGATTTAACGAAAAGAGCGATGGGGATGGCAGAATTTCTTGACGATAGCCATTTTACAAACGTGGAGTCAGCTTTGGTTGGTCTTGGTTGTAAGGAATGCCTTCTGCCTCTAGAAAGTGGAAAGTCTGGTGATATAAAACCTTTACATAATGTATTGACAAAGTGCGGCGTGATGCTAACAGAGAGGAAGAAATCAGAATTTAAAATGAGAGACTTGGTGCAGGATCTTTCGAGGCTCGTCAAAGGTTCTGTTGAACCTGTTCGAGATTTGGTATCTGGATTTGAATTTGCACCTGCTGCCTTAGGAGCACTGCTGGCGTATGCAGAATTACTGGCAGATGAAAGCAATTATGGAAACTATAACATCCAGAAGTACAATCTTGATAGCTACATGAGGCTAGACTCTGCTGCCATTAGAGCATTAAACGTCCTAGAGAGCAAAACCGATGCAAACAAAAACTTCAGTTTGTTTGGTCTTATGAATAGAACCTGTACTGCTGGAATGGGTAAAAGATTGCTTCATATGTGGTTAAAACAGCCTCTGTTAGATGTCAAAGAAATTAGTTCCAGACTGGATCTTGTTCAAGCGTTTGTGGAGGACACTGCTCTCTGCCAAGATTTGAGACAGCATCTCAAACGAATCTCAGATATTGAACGATTGACGCATTATCTTGAGAAGAGAAGAGCTGGATTACAGCACATCGTTAAACTTTATCAGGTATAAGTTTAAATGAACTGCTGAAATTCGTTTTAATTGAAACGATTCTTAAAGAATGGTTTGGATAATGACTAATGACTAATGACTAATGATATGCTAATTGAACACCGATGCATTGATATCTGTAAATATACCCCTTTAGCTAAATTATTTACGTTTTTTTACTCTATTTATAAAGAAGTAAAATAGACAAGTAAAGACGAAGAGAACATTTATATAAAAGCAAAAAAATTGATTGTCTTCTCTTCATTTTTATTTGGGTTTAGGGTTAAATCTTGACACTGGGTTTCCACACACACACACACACACATATCTTGGCACTGGTTGAATCAAGGTTCTTGTACTATCAATATTATGAATAAATTGCTATCGGGACTTGGTTTTCATTGCAAGATTTATGTTTTTGTGGTAAGTGGTATTTTATGTCCTTATTACTATGATATTTAAACTTTCATTTTTATAATGCAGTCAAGTATAAGGCTTCCATTCATTAAAAATGCCTTGGAGAACTACGAAGGACAATTTTCCTCGCTGATCAAGGAAAAGTACTTGGAATTTCTAGAGACCTGTACTGACAATGATCACCTGAACAAGTTCAATAATCTCGTGGAAACTGCTATTGATCTTGATCAGCTTGAGAATGGAGAATATATGATTTCATCTAGTTATGATGCTACTCTTTCCAAATTGAAGAATGTGCAAGAATCAATAGAGCAGCAAATACAGGACTTGCATAGGCAAGTTGCTAATGATCTTGATCTTCCAGTTGACAAGGCTTTGAAGTTAGACAAAGGTACACAATTTGGACATGTTTTTAGAATTACTAAGAAAGAAGAACCAAAAGTAAGAAAAAAGCTCTCCACCCACTTCATTGTTCTTGAAACCCGAAAAGATGGAGTGAAGTTTACAAATACCAAACTTAAAAAGTTGGGTGACCAGTATCAGAAAATAGTCGAGGAGTACAAAAGTTGCCAGAAAGATTTGGTTCATCGAGTAATTGAAACTGCTTCATCCTTCAATGAGGTGGATTTTCTGTCTATGATGTATCTATTGTTCATTAATCATTAGCACTTTAATTGGACTTAAAGAACTTTGTGTATTTGTAGGTATTCAAACCTTTGGCCGAGTTGCTCTCTGAATTGGATGTTTTACTTGGTTTTGCTGATTTGGCCTCTAGCTGTCCCACTCCTTATACTAGACCAGACATCACTTCATCGGTATTCCTTTTTTTCTGTTGGTTATCTTAAGCCCCAATAGATAATGTATCTCAATTAAAAGTAGCACTTAACTATTGTATCTCATTAAAAATTGCAATTGCTCAAACATTAACTTGTTTGTGTCCATCTGCAACAGGATGAGGGAAATATTATATTGGAAGGAAGTAGGCATCCTTGTGTGGAGGCTCAAGACTGGGTTAATTTCATACCAAATGATTGTAAACTAGTGAGTAGCTTGTTTGGATAATCAAGAATAAGCTAATTCTATTCTCATTTGTTGTTATTATGTTTTAGATGTGAAATATCTGATTACTCTAAACTCTTCTTTCTCTCGTAAATAGGTAAGGGGTAAAAGTTGGTTCCAGATCATTACTGGGCCTAACATGGGTGGAAAATCTACATTTATCCGGCAGGTGTTATGTTAATTACATTCACCATTATTTTATTTTAAAATATTTTTAAACCTTTTGGTGGTCTAATAGCCTGGAGCTGTGACTTATTCTTCCAAACTCAGCAATTCTTCCAAATTCATCTTATGCTGAGTTTGGATGATTAAGTATCACAGGTGCTTGATATTAGCTTGCTGTTACTGTTACACCATGTATTCACTCTGAACAATGGAACTACTTTTTGGCGTCACATAAATCATCTGAACCAGTTTTTTTGTGTGTTTCAAAGGTAGGAGTGAACATTCTAATGGCACAAGTAGGTTGTTTTGTTCCCTGTGACAAAGCTAGCATTTCTGTTCGTGACTGCATTTTTGCCCGCGTAGGTGCAGGTGACTGTCAAGTGAGTTGTCAAAACACACTCGTTTCTTTTGTAACATCACTTCACTAAATACTACATTTTCATCAACCATCAGATCAACGTTTCTTCAAACATATCATGGTTACTTTCCATTAAGTAGTTAAAGGAGATTGGTTCTCAGTGCGTCCTTCACTTCACTGGAGAGCTTTCTTCATGCTAGAACACTGACTAGAACTTATGCCTAGTTTCTTACATCTATCCATATGGACAAGAGGGGGAAGAAGATTCACCGGCTCTCCTAAACTTTTGATCAATCTGTGATATGTTTTTCATGTCATCAAATGATCTTTTTTCCTTATTGTTGTAATCGTATTTCTGCCTAATTTGCATGTTTCATCAACTAATAAAAACTCGTTCTACATATAAAAAGAAGAAGAAGAAATTGTATGTTTACAATCAACTTTGTAATTGATGGGGAACCATTTTCAGTCTTTTTCTGTAGAAGCATTTGCTCGACAGACAAAATTATATTCTACCAGTTGTTTCCTTTGTTCTGGAACTCTAAGAATGTTTACTTTACCATTCTAGCTTCGTGGAGTTTCTACCTTTATGCAAGAGATGCTTGAAACTGCATCTATACTGAAGGGAGCTACAGAGAAATCTTTGATAATCATTGATGAATTGGGCCGTGGGACATCCACTTATGATGGATTTGGTTCGTTTCATTCTTGACTCTTTAGTTTCCTCCTGATATGTTTGCATTATAGAGTTTCCATTGGTTATTGCACAAACTTCACGCGCATCCTTAATTCTTATTTCTTGTCCCCCCTTTTTGAAGAATATCCAAATGAGTTGTTAATGTTTATGGCTGGAAACTCTATTAAAAAGCAGACTAACCGAGTCTCCAACATTCCTTGAACTTTTTTATATATGATGCTAATGATTGTTTTTGTTTAAATTAATTAAAGCATGTTGGTGAAGAACTTAAGGAGATCAGTTTATACAATAATCTTCATTTCAACTATTCTACTTCACCTGATGAAAATTGTTGTACAGTTCAAATGGGACTCTTTATGGTGTGCTGATTTTCGCTTATGAACATTGATTCCTTTCTATCTTTACTTAACCTGCTGAAAATTTCAATACATCTTAATTGATACTTTCTTATTACATGACAATCAACACCTAAAATTTTATGCTTGGAGCACGCAAGGCACTGCCTTTTTTCCTGTTTTTAAATGAAATAGTTGGATTTTATTTAAATAGCTCTGTATTGAATCTTATAATCAGGTCTAGCATGGGCCATTTGTGAACATCTTGTTGAAGTTATTAAAGCACCCACTTTGTTTGCAACCCACTTCCATGAACTTACTGCACTAGCTCATGGGAATACTGATCTTGATTCCCATGGAAAGCAAATGGTCGGTGTGGCAAATTTTCATGTCAGTGCACACATAGACTCATCAAATCACAAGTTGACAATGCTATACAAGGTAAATGTTTGCTTGGAATATCTCTTTTTCTTGTATTCTATATTCTTCTCTCTGTCTGACTCTTAAAGTAGATGGGTTTACCAAGGACATCACAATTCACAATGCTTATTTTTTTACTATTTCTTTAGGATTCTGTAGTTTGGTCAAAAGCTTTGTGAAAAACAGTTTAATATAACCATGTAGTTTGAATTTTGAAAGACACTACAGAAGGGCAGTGGGGGTGTCATTTGAATAAATTCTGTTGGATTAATATTAACCTGTACGGTATCTGTAATATGTTGATCTGGAGTCATTTGATCAATGAGAGTGAAAGTAGAGCTAAAGCCTTGAGTGCTGTTGACACATGTTCTTGAGCCTTTAATAGCAAAGGAGGATACCAAAGTCGTTGTCTTCTAAAACATATTCTAAGAACAGTGTGGATTTACAACTTGTGAATTTACCCTTGGTATTTTACCCAGGATTTCTTTTACCGGTCTTAGTTAAAATTGGATGCAGTGAGTTCATTGTTTTGCCCCAATTTCTTGGTGTTGTAAGTTCTTTTGTGTTACTGAGCTTCATTTGTTCCTTCGTTTTTTTGTCTTGTGCAGGTTGAACCCGGAGCTTGTGATCAAAGCTTTGGGATTCATGTAGCAGAATTTGCTAATTTTCCTTCTAGTGTCGTGGCACTTGCCAGAGAAAAGGCTGCTGAACTGGAAGATTTCTCCACCGATACAACTGCTCCAAACACTAATGGGAAAGAGGTATACAATCTTTAGTCTTACATTTCGAACTAAAACAATTGATTCCATCCTTATCTACTACAATTTATGGGAGAATGATCCAGAAATTCAAATAAGAACAACATATCTTACCTTCTTTGTCTATTAAGTCACGTGTTTCCATTTCTTTTTGAAATTCTTGTAACACCCTGCTAAAAGGATGGATGTAATTTTTACAAACCTTAAGGCTGAAAAAGTCATCAACAAGCTTTGAAACCTAAACTGCTATTTCTCCAGAATTTAATTGGAATTCCTTTCTTACCAAATAAACTGAATGCAAGTGATCTTAACTATTTTAGAATCATTTCCAAAATATGCCCTTAGAGTAATGCTCATATTTGATTTGTCTGTGCTGATTCTCTTTTTCTTTTTAAATTCAACAACATATGAAGATTTGAAGCTCCAGTTTTTTTAATTAAGGGTAGATCCTTAAATCAATTCAGCTATTGCTATGCCCAAATTGGCTTACTGTTTCTTTTTCTTTCTTTTGCCCTAATAGACTTATGAGTGCATGCTTATACACATGCGTGTAGGCACTCAAGTCATGTTTTATATGTCATTGCTCATCATTATATTACCTTTTGGATTTGAATACACATTATATACACAGATACCATCAAAGAGAAAACGTGAGTTCAGTTCAGATGACATGTCCAAAGGCGTAGCACGGGCTCGCCAGTTCCTAGAGGAGTTTTCTAATCTGCCCTTGGATAAAATGGATCTGAAGGAAGCTCTACAACAAGTGAGTCAATTACGAGATGGTTTGAAGAAGGATGCCGTGGACTCTAATTGGCTCCAACAATTCCTTTGAGGTATCATTCTTGTCTTGTGGCCTTTGTACAGCTTTTGTTAAGGCTTAAAGGAGATGATTTTGAGAGTCTTTTCCCTCACAATTTTGGATGTACATAACCCCACAAATACTCTTGCTAGCTTCAGTTTTGGGTATCCTCCCTCACAATTTTGGTTCTTTTGGTGGAGAGGGGAAAGGCTAATTATGTATCAAAGCCCTGGAGAATATGGAATCTGTGGACTACTTGTTAAATCTTATGTCAGGTGCCTGATTTTCATGCTTTCATATGTTCATTGATAAATAGTTTATTAGGGTGTATTTATTAACTTTTCACCTCTAGTAATAGAGGTTATGCCAATATCAATCGGTCAAGTTCATTTTGACTATTTTGAATACAA

mRNA sequence

TTTGAGCCGGGAGCGTACTTCCGAACGCGCGAGTAGTCTCAGTTTCCCGCCACTACCATCGGCACTCAACCGAATGTAAAACTCATCGCCAAGCTTTTCAGGTTCCAAGGATTTTTCATTAAGGAAAAGGGCAAAGGAGAAGGAAAAAAGGGGAAGAAAAGCCATAATCGTAAGCTTCAAAGCGAATGGATGACAACGTTGATGAGCGAAGCAAACTTCCCGAGCTCAAACTTGATGCTAAGCAGGCTCAAGGGTTTCTAGCGTTCTTCAAAACCCTACCCCCTGACTCAAGAGCTGTTCGATTTTTTGATCGTCGGGATTACTATACTGCCCATAGCGATAATGCAGTTTTCATTGCAAAGACCTATTACCGTACTACGACTGCTTTGCGGCAACTGGGCAATGCATCTGAATCCCTTTCTAGTGTGAGTGTTAGCAAAAATATGTTCGAATCCATTGCTCGAGATCTTCTTTTGGAAAGAACAGACCATACACTGGAGCTTTATGAGGGTAGTGGTTCGAATTGGAGATTGATCAAAAGTGGATCACCTGGCAATATTGGAAGTTTTGAAGATGTTTTGTTTGCAAATAATGAAATGCAGGATAGTCCTGCTATTGTGGCACTGTTTCCATACTTCAGAGATAATGGGTGCATTGTTGGACTAGGCTATGTTGATTTAACGAAAAGAGCGATGGGGATGGCAGAATTTCTTGACGATAGCCATTTTACAAACGTGGAGTCAGCTTTGGTTGGTCTTGGTTGTAAGGAATGCCTTCTGCCTCTAGAAAGTGGAAAGTCTGGTGATATAAAACCTTTACATAATGTATTGACAAAGTGCGGCGTGATGCTAACAGAGAGGAAGAAATCAGAATTTAAAATGAGAGACTTGGTGCAGGATCTTTCGAGGCTCGTCAAAGGTTCTGTTGAACCTGTTCGAGATTTGGTATCTGGATTTGAATTTGCACCTGCTGCCTTAGGAGCACTGCTGGCGTATGCAGAATTACTGGCAGATGAAAGCAATTATGGAAACTATAACATCCAGAAGTACAATCTTGATAGCTACATGAGGCTAGACTCTGCTGCCATTAGAGCATTAAACGTCCTAGAGAGCAAAACCGATGCAAACAAAAACTTCAGTTTGTTTGGTCTTATGAATAGAACCTGTACTGCTGGAATGGGTAAAAGATTGCTTCATATGTGGTTAAAACAGCCTCTGTTAGATGTCAAAGAAATTAGTTCCAGACTGGATCTTGTTCAAGCGTTTGTGGAGGACACTGCTCTCTGCCAAGATTTGAGACAGCATCTCAAACGAATCTCAGATATTGAACGATTGACGCATTATCTTGAGAAGAGAAGAGCTGGATTACAGCACATCGTTAAACTTTATCAGTCAAGTATAAGGCTTCCATTCATTAAAAATGCCTTGGAGAACTACGAAGGACAATTTTCCTCGCTGATCAAGGAAAAGTACTTGGAATTTCTAGAGACCTGTACTGACAATGATCACCTGAACAAGTTCAATAATCTCGTGGAAACTGCTATTGATCTTGATCAGCTTGAGAATGGAGAATATATGATTTCATCTAGTTATGATGCTACTCTTTCCAAATTGAAGAATGTGCAAGAATCAATAGAGCAGCAAATACAGGACTTGCATAGGCAAGTTGCTAATGATCTTGATCTTCCAGTTGACAAGGCTTTGAAGTTAGACAAAGGTACACAATTTGGACATGTTTTTAGAATTACTAAGAAAGAAGAACCAAAAGTAAGAAAAAAGCTCTCCACCCACTTCATTGTTCTTGAAACCCGAAAAGATGGAGTGAAGTTTACAAATACCAAACTTAAAAAGTTGGGTGACCAGTATCAGAAAATAGTCGAGGAGTACAAAAGTTGCCAGAAAGATTTGGTTCATCGAGTAATTGAAACTGCTTCATCCTTCAATGAGGTATTCAAACCTTTGGCCGAGTTGCTCTCTGAATTGGATGTTTTACTTGGTTTTGCTGATTTGGCCTCTAGCTGTCCCACTCCTTATACTAGACCAGACATCACTTCATCGGATGAGGGAAATATTATATTGGAAGGAAGTAGGCATCCTTGTGTGGAGGCTCAAGACTGGGTTAATTTCATACCAAATGATTGTAAACTAGTAAGGGGTAAAAGTTGGTTCCAGATCATTACTGGGCCTAACATGGGTGGAAAATCTACATTTATCCGGCAGGTAGGAGTGAACATTCTAATGGCACAAGTAGGTTGTTTTGTTCCCTGTGACAAAGCTAGCATTTCTGTTCGTGACTGCATTTTTGCCCGCGTAGGTGCAGGTGACTGTCAACTTCGTGGAGTTTCTACCTTTATGCAAGAGATGCTTGAAACTGCATCTATACTGAAGGGAGCTACAGAGAAATCTTTGATAATCATTGATGAATTGGGCCGTGGGACATCCACTTATGATGGATTTGGTCTAGCATGGGCCATTTGTGAACATCTTGTTGAAGTTATTAAAGCACCCACTTTGTTTGCAACCCACTTCCATGAACTTACTGCACTAGCTCATGGGAATACTGATCTTGATTCCCATGGAAAGCAAATGGTCGGTGTGGCAAATTTTCATGTCAGTGCACACATAGACTCATCAAATCACAAGTTGACAATGCTATACAAGGTTGAACCCGGAGCTTGTGATCAAAGCTTTGGGATTCATGTAGCAGAATTTGCTAATTTTCCTTCTAGTGTCGTGGCACTTGCCAGAGAAAAGGCTGCTGAACTGGAAGATTTCTCCACCGATACAACTGCTCCAAACACTAATGGGAAAGAGATACCATCAAAGAGAAAACGTGAGTTCAGTTCAGATGACATGTCCAAAGGCGTAGCACGGGCTCGCCAGTTCCTAGAGGAGTTTTCTAATCTGCCCTTGGATAAAATGGATCTGAAGGAAGCTCTACAACAAGTGAGTCAATTACGAGATGGTTTGAAGAAGGATGCCGTGGACTCTAATTGGCTCCAACAATTCCTTTGAGGTATCATTCTTGTCTTGTGGCCTTTGTACAGCTTTTGTTAAGGCTTAAAGGAGATGATTTTGAGAGTCTTTTCCCTCACAATTTTGGATGTACATAACCCCACAAATACTCTTGCTAGCTTCAGTTTTGGGTATCCTCCCTCACAATTTTGGTTCTTTTGGTGGAGAGGGGAAAGGCTAATTATGTATCAAAGCCCTGGAGAATATGGAATCTGTGGACTACTTGTTAAATCTTATGTCAGGTGCCTGATTTTCATGCTTTCATATGTTCATTGATAAATAGTTTATTAGGGTGTATTTATTAACTTTTCACCTCTAGTAATAGAGGTTATGCCAATATCAATCGGTCAAGTTCATTTTGACTATTTTGAATACAA

Coding sequence (CDS)

ATGGATGACAACGTTGATGAGCGAAGCAAACTTCCCGAGCTCAAACTTGATGCTAAGCAGGCTCAAGGGTTTCTAGCGTTCTTCAAAACCCTACCCCCTGACTCAAGAGCTGTTCGATTTTTTGATCGTCGGGATTACTATACTGCCCATAGCGATAATGCAGTTTTCATTGCAAAGACCTATTACCGTACTACGACTGCTTTGCGGCAACTGGGCAATGCATCTGAATCCCTTTCTAGTGTGAGTGTTAGCAAAAATATGTTCGAATCCATTGCTCGAGATCTTCTTTTGGAAAGAACAGACCATACACTGGAGCTTTATGAGGGTAGTGGTTCGAATTGGAGATTGATCAAAAGTGGATCACCTGGCAATATTGGAAGTTTTGAAGATGTTTTGTTTGCAAATAATGAAATGCAGGATAGTCCTGCTATTGTGGCACTGTTTCCATACTTCAGAGATAATGGGTGCATTGTTGGACTAGGCTATGTTGATTTAACGAAAAGAGCGATGGGGATGGCAGAATTTCTTGACGATAGCCATTTTACAAACGTGGAGTCAGCTTTGGTTGGTCTTGGTTGTAAGGAATGCCTTCTGCCTCTAGAAAGTGGAAAGTCTGGTGATATAAAACCTTTACATAATGTATTGACAAAGTGCGGCGTGATGCTAACAGAGAGGAAGAAATCAGAATTTAAAATGAGAGACTTGGTGCAGGATCTTTCGAGGCTCGTCAAAGGTTCTGTTGAACCTGTTCGAGATTTGGTATCTGGATTTGAATTTGCACCTGCTGCCTTAGGAGCACTGCTGGCGTATGCAGAATTACTGGCAGATGAAAGCAATTATGGAAACTATAACATCCAGAAGTACAATCTTGATAGCTACATGAGGCTAGACTCTGCTGCCATTAGAGCATTAAACGTCCTAGAGAGCAAAACCGATGCAAACAAAAACTTCAGTTTGTTTGGTCTTATGAATAGAACCTGTACTGCTGGAATGGGTAAAAGATTGCTTCATATGTGGTTAAAACAGCCTCTGTTAGATGTCAAAGAAATTAGTTCCAGACTGGATCTTGTTCAAGCGTTTGTGGAGGACACTGCTCTCTGCCAAGATTTGAGACAGCATCTCAAACGAATCTCAGATATTGAACGATTGACGCATTATCTTGAGAAGAGAAGAGCTGGATTACAGCACATCGTTAAACTTTATCAGTCAAGTATAAGGCTTCCATTCATTAAAAATGCCTTGGAGAACTACGAAGGACAATTTTCCTCGCTGATCAAGGAAAAGTACTTGGAATTTCTAGAGACCTGTACTGACAATGATCACCTGAACAAGTTCAATAATCTCGTGGAAACTGCTATTGATCTTGATCAGCTTGAGAATGGAGAATATATGATTTCATCTAGTTATGATGCTACTCTTTCCAAATTGAAGAATGTGCAAGAATCAATAGAGCAGCAAATACAGGACTTGCATAGGCAAGTTGCTAATGATCTTGATCTTCCAGTTGACAAGGCTTTGAAGTTAGACAAAGGTACACAATTTGGACATGTTTTTAGAATTACTAAGAAAGAAGAACCAAAAGTAAGAAAAAAGCTCTCCACCCACTTCATTGTTCTTGAAACCCGAAAAGATGGAGTGAAGTTTACAAATACCAAACTTAAAAAGTTGGGTGACCAGTATCAGAAAATAGTCGAGGAGTACAAAAGTTGCCAGAAAGATTTGGTTCATCGAGTAATTGAAACTGCTTCATCCTTCAATGAGGTATTCAAACCTTTGGCCGAGTTGCTCTCTGAATTGGATGTTTTACTTGGTTTTGCTGATTTGGCCTCTAGCTGTCCCACTCCTTATACTAGACCAGACATCACTTCATCGGATGAGGGAAATATTATATTGGAAGGAAGTAGGCATCCTTGTGTGGAGGCTCAAGACTGGGTTAATTTCATACCAAATGATTGTAAACTAGTAAGGGGTAAAAGTTGGTTCCAGATCATTACTGGGCCTAACATGGGTGGAAAATCTACATTTATCCGGCAGGTAGGAGTGAACATTCTAATGGCACAAGTAGGTTGTTTTGTTCCCTGTGACAAAGCTAGCATTTCTGTTCGTGACTGCATTTTTGCCCGCGTAGGTGCAGGTGACTGTCAACTTCGTGGAGTTTCTACCTTTATGCAAGAGATGCTTGAAACTGCATCTATACTGAAGGGAGCTACAGAGAAATCTTTGATAATCATTGATGAATTGGGCCGTGGGACATCCACTTATGATGGATTTGGTCTAGCATGGGCCATTTGTGAACATCTTGTTGAAGTTATTAAAGCACCCACTTTGTTTGCAACCCACTTCCATGAACTTACTGCACTAGCTCATGGGAATACTGATCTTGATTCCCATGGAAAGCAAATGGTCGGTGTGGCAAATTTTCATGTCAGTGCACACATAGACTCATCAAATCACAAGTTGACAATGCTATACAAGGTTGAACCCGGAGCTTGTGATCAAAGCTTTGGGATTCATGTAGCAGAATTTGCTAATTTTCCTTCTAGTGTCGTGGCACTTGCCAGAGAAAAGGCTGCTGAACTGGAAGATTTCTCCACCGATACAACTGCTCCAAACACTAATGGGAAAGAGATACCATCAAAGAGAAAACGTGAGTTCAGTTCAGATGACATGTCCAAAGGCGTAGCACGGGCTCGCCAGTTCCTAGAGGAGTTTTCTAATCTGCCCTTGGATAAAATGGATCTGAAGGAAGCTCTACAACAAGTGAGTCAATTACGAGATGGTTTGAAGAAGGATGCCGTGGACTCTAATTGGCTCCAACAATTCCTTTGA

Protein sequence

MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKTYYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSGSPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSHFTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLSRLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAAIRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAFVEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQFSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQFLEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL

Homology

[Close]

BLAST of Cmc02g0055611 vs. NCBI nr
Match: XP_008453367.1 (PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Cucumis melo] >KAA0058051.1 DNA mismatch repair protein MSH2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1866.3 bits (4833), Expect = 0.0e+00
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. NCBI nr
Match: TYK28397.1 (DNA mismatch repair protein MSH2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1863.2 bits (4825), Expect = 0.0e+00
Identity = 940/942 (99.79%), Postives = 941/942 (99.89%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MDDNVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MDDNVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKR MGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. NCBI nr
Match: XP_011648756.1 (DNA mismatch repair protein MSH2 [Cucumis sativus] >KGN63799.1 hypothetical protein Csa_013630 [Cucumis sativus])

HSP 1 Score: 1833.9 bits (4749), Expect = 0.0e+00
Identity = 922/942 (97.88%), Postives = 933/942 (99.04%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           M DNVDE++KLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MGDNVDEQTKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASE+LSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKR MGMAEF+DDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFIDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVG+GCKECLLPLESGKSGDIKPLH+VLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGIGCKECLLPLESGKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RL+KGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLIKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETA+DLDQLENGEYMI+SSYD TLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAVDLDQLENGEYMIASSYDDTLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVF+PLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFRPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSS+EGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQM GVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMAGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFS DTTA  TNGKEIP KRKREFSSDDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSIDTTASTTNGKEIPLKRKREFSSDDMSKGVERARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. NCBI nr
Match: XP_038890004.1 (DNA mismatch repair protein MSH2 [Benincasa hispida])

HSP 1 Score: 1795.4 bits (4649), Expect = 0.0e+00
Identity = 904/942 (95.97%), Postives = 920/942 (97.66%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MD+NVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAH DNAVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHGDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASE+LSSVSVSKNMFESI RDLLLER DH LELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESITRDLLLERMDHILELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFR+NGC+VGLGYVDLTKR MGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRENGCMVGLGYVDLTKRVMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLESGK GDIKPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKFGDIKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           +RALNVLE KTDANKNFSLFGLMNRTCT GMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 MRALNVLERKTDANKNFSLFGLMNRTCTVGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTAL QDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIR+PFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRIPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLE  TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD  LSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDRGLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           E+IEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ETIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQK+LVHRVIETASSFNEVF+PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRP+ITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPNITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDL+ HGKQMVGV NFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQMVGVENFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFS+DTT   T GKEIP KRKREF SDDMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSSDTTTSATTGKEIPLKRKREFGSDDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. NCBI nr
Match: XP_023516636.1 (DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1773.1 bits (4591), Expect = 0.0e+00
Identity = 893/942 (94.80%), Postives = 917/942 (97.35%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MD+NVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT H D+AVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SE+LSSVSVSKNMFESIARDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVAL P FR+NGCIVGL YVDLTKR MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPL+SGK GD+KPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           +RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTAL QDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKY+E LE  TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD  LSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYK+ QK+LVHRVIETASSFNEVF+PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDL+ HGKQ+VGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTD+T   T GKEIPSKRKREF S+DMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. ExPASy Swiss-Prot
Match: O24617 (DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV=1)

HSP 1 Score: 1427.5 bits (3694), Expect = 0.0e+00
Identity = 694/942 (73.67%), Postives = 826/942 (87.69%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           M+ N +E++KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYTAH +N+VFIAKT
Sbjct: 1   MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YY TTTALRQLG+ S +LSSVS+S+NMFE+IARDLLLER DHT+ELYEGSGSNWRL+K+G
Sbjct: 61  YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQD+P +V++FP F D  C++G+ YVDLT+R +G+AEFLDDS 
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTN+ES+L+ LG KEC+ P ESGKS + K L++ L +C VM+TERKK EFK RDL  DL 
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKG++EPVRDLVSGF+ A  ALGALL+++ELL++E NYGN+ I++Y++  +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           +RALNV+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VE+  L QDLRQHLKRISD+ERL   LE+RR GLQHI+KLYQS+IRLPFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           F+SLI E+YL+ LE  +D DHL KF +LVE ++DLDQLENGEYMISSSYD  L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           E +EQQI +LH++ A +LDL VDKALKLDK  QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQ +V++Y+SCQK+LV RV+ET +SF+EVF+ LA LLSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLL FADLA+SCPTPY RP+ITSSD G+I+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV+V +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALA  N+++  +    VGVANFHVSAHID+ + KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFP SVVALAREKAAELEDFS  +     N +E   ++ RE   D++S+G  RA +F
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSSMI--INNEESGKRKSREDDPDEVSRGAERAHKF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           L+EF+ +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 LKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937

[Close]

BLAST of Cmc02g0055611 vs. ExPASy Swiss-Prot
Match: Q9XGC9 (DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1)

HSP 1 Score: 1302.3 bits (3369), Expect = 0.0e+00
Identity = 652/940 (69.36%), Postives = 771/940 (82.02%), Query Frame = 0


Query: 2   DDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKTY 61
           DD   E  KLPE KLDA+QAQGF++FFK LP D RAVR FDRRDYYTAH +NA FIA+TY
Sbjct: 4   DDFTPEGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIARTY 63

Query: 62  YRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSGS 121
           Y T +ALRQLG++S+ + S SVSK MFE+IAR++LLERTD TLELYEGSGSNWRL KSG+
Sbjct: 64  YHTMSALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGT 123

Query: 122 PGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSHF 181
           PGNIGSFED+LFANN+M+DSP IVALFP  R++   VGL ++D+T R +G+AEF +DS F
Sbjct: 124 PGNIGSFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRF 183

Query: 182 TNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLSR 241
           TNVESALV LGCKECLLP +  KS D+ PL +V++ C V+LTE+KK++FK RDL QDL R
Sbjct: 184 TNVESALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGR 243

Query: 242 LVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAAI 301
           +++GSVEPVRDL+S F++A   LGALL+YAELLAD++NYGNY I+KYNL+ YMRLDSAA+
Sbjct: 244 IIRGSVEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAV 303

Query: 302 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAFV 361
           RALN+ E KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDV EI++RLD+VQAFV
Sbjct: 304 RALNIAEGKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFV 363

Query: 362 EDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQF 421
           ED  L Q LRQ LKRISDI+RLTH L K+ A LQ +VKLYQS  R+P+IK  L+ Y GQF
Sbjct: 364 EDPELRQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQF 423

Query: 422 SSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQE 481
           S+LI+ K+LE LE     +   +F++LVETAIDL QLENGEY IS  Y + L  LK+   
Sbjct: 424 STLIRSKFLEPLEEWMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELS 483

Query: 482 SIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLET 541
            +E  I +LH   A+DLDL VDK LKL+KG+  GHVFR++KKEE KVRKKL+  ++++ET
Sbjct: 484 VVENHINNLHVDTASDLDLSVDKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIET 543

Query: 542 RKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELDV 601
           RKDGVKFTN+KLK L DQYQ +  EY SCQK +V  V+  + +F+EVF+  A +LSELDV
Sbjct: 544 RKDGVKFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDV 603

Query: 602 LLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWF 661
           L  FADLA+SCP PY RPDIT+SDEG+I+L GSRHPC+EAQD VNFIPNDC LVRGKSWF
Sbjct: 604 LQSFADLATSCPVPYVRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWF 663

Query: 662 QIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVST 721
           QIITGPNMGGKSTFIRQVGVN+LMAQVG FVPCD+ASISVRDCIFARVGAGDCQL GVST
Sbjct: 664 QIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVST 723

Query: 722 FMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHF 781
           FMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHL+EV +APTLFATHF
Sbjct: 724 FMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHF 783

Query: 782 HELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAE 841
           HELTALAH N D   H    +GVAN+HV AHID  + KLTMLYKVEPGACDQSFGIHVAE
Sbjct: 784 HELTALAHRNDDEHQHISD-IGVANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAE 843

Query: 842 FANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQFL 901
           FANFP +VVALA+ KAAELEDFST  T  +    E+ SKRKR FS DD+++G ARAR FL
Sbjct: 844 FANFPEAVVALAKSKAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFL 903

Query: 902 EEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQF 942
           EEF+ LP+D+MD  + L+  ++++  L+KDA D+ WLQQF
Sbjct: 904 EEFAALPMDEMDGSKILEMATKMKADLQKDAADNPWLQQF 941

[Close]

BLAST of Cmc02g0055611 vs. ExPASy Swiss-Prot
Match: Q5XXB5 (DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 5.3e-205
Identity = 396/928 (42.67%), Postives = 584/928 (62.93%), Query Frame = 0


Query: 14  LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHSDNAVFIAKTYYRTTTALRQLG 73
           L+L++    GF+ FF+++P   +  VR FDR D+YTAH ++A+  A+  ++T   ++ +G
Sbjct: 9   LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 74  NA-SESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSN-------WRLIKSGSPGN 133
            A +++L SV +SK  FES  +DLLL R  + +E+Y+    N       W L    SPGN
Sbjct: 69  PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 128

Query: 134 IGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSHFTNV 193
           +  FED+LF NN+M  S  +V +     D    VG+GYVD T+R +G+ EF D+  F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188

Query: 194 ESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
           E+ L+ +G KEC+LP     +GD+  L  ++ + G+++TERKK++F  +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 248

Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 313
           G   E +   V      + A ++L A++ + ELL+D+SN+G + +  ++   YM+LD AA
Sbjct: 249 GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308

Query: 314 IRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQA 373
           +RALN+ + S  D   + SL  L+N+ C    G+RL++ W+KQPL+D   I  RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368

Query: 374 FVEDTALCQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYE 433
           FVED  L Q L++  L+R  D+ RL    +++ A LQ   +LYQ   +LP +  ALE +E
Sbjct: 369 FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE 428

Query: 434 GQFSSLIKEKYLEFLETCTD-NDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLK 493
           G+   L+      F+   TD     +KF  ++ET +D+DQ+EN E+++  S+D  LS+L+
Sbjct: 429 GKHQKLL---LAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELR 488

Query: 494 NVQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 553
            +   +E+++Q      A DL L   K +KLD  TQFG+ FR+T KEE  +R   + +F 
Sbjct: 489 EIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFS 548

Query: 554 VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLS 613
            ++ +K+GVKFTN+KL  L ++Y K   EY+  Q  +V  ++  +S + E  + L ++L+
Sbjct: 549 TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA 608

Query: 614 ELDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG 673
           +LD ++ FA +++  P PY RP I    +G IIL+ SRH CVE QD + FIPND    + 
Sbjct: 609 QLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKD 668

Query: 674 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLR 733
           K  F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 669 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 728

Query: 734 GVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLF 793
           GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++   I A  +F
Sbjct: 729 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF 788

Query: 794 ATHFHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGI 853
           ATHFHELTALA+          Q+  V N HV+A   ++   LTMLY+V+ G CDQSFGI
Sbjct: 789 ATHFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGI 848

Query: 854 HVAEFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARA 913
           HVAE ANFP  V+  A++KA ELE+F        + G ++    K+ +   +  +G    
Sbjct: 849 HVAELANFPKHVIECAKQKALELEEFQ---YIGESQGYDMEPAAKKCYL--EREQGEKII 908

Query: 914 RQFLEEFSNLPLDKMDLKEALQQVSQLR 926
           ++FL +   +P  +M  +    ++ QL+
Sbjct: 909 QEFLSKVKQMPFTEMSEENITIKLKQLK 911

[Close]

BLAST of Cmc02g0055611 vs. ExPASy Swiss-Prot
Match: Q3MHE4 (DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 1.2e-204
Identity = 397/927 (42.83%), Postives = 583/927 (62.89%), Query Frame = 0


Query: 14  LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHSDNAVFIAKTYYRTTTALRQLG 73
           L+LD+    GF+ FF+ +P   +  VR FDR D+YTAH ++A+  A+  ++T   ++ +G
Sbjct: 9   LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68

Query: 74  NA-SESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSN-------WRLIKSGSPGN 133
            A +++L SV +SK  FES  +DLLL R  + +E+Y+    N       W L    SPGN
Sbjct: 69  PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 128

Query: 134 IGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSHFTNV 193
           +  FED+LF NN+M  S  +V +     D    VG+GYVD T+R +G+ EF D+  F+N+
Sbjct: 129 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 188

Query: 194 ESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
           E+ L+ +G KEC++P     +GD+  L  V+ + G+++TERK+++F  +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVMP-GGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248

Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 313
           G   E V   V      + A ++L A++ + ELL+D+SN+G + +  ++   YM+LD AA
Sbjct: 249 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 308

Query: 314 IRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQA 373
           +RALN+ + S  D + + SL  L+N+ C    G+RL++ W+KQPL+D   I  RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 368

Query: 374 FVEDTALCQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYE 433
           FVED  L Q+L++  L+R  D+ RL    +++ A LQ   +LYQ   +LP +  ALE YE
Sbjct: 369 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 428

Query: 434 GQFSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKN 493
           G+  +L    ++  L     +   +KF  ++ET +D+DQ+EN E+++  S+D  LS+L+ 
Sbjct: 429 GKHQALFLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 488

Query: 494 VQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIV 553
           + + +E+++Q      A DL L   K +KLD  TQFG+ FR+T KEE  +R   + +F  
Sbjct: 489 IMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFST 548

Query: 554 LETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSE 613
           ++ +K+GVKFTN+KL  L ++Y K   EY+  Q  +V  ++  +S + E  + L ++L++
Sbjct: 549 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQ 608

Query: 614 LDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGK 673
           LD ++ FA ++ + P PY RP I     G I L+ SRH CVE QD V FIPND    + K
Sbjct: 609 LDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 668

Query: 674 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRG 733
             F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 669 QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKG 728

Query: 734 VSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFA 793
           VSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++   I A  +FA
Sbjct: 729 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 788

Query: 794 THFHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIH 853
           THFHELTALA+          Q+  V N HV+A   ++   LTMLY+V+ G CDQSFGIH
Sbjct: 789 THFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIH 848

Query: 854 VAEFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARAR 913
           VAE ANFP  V+  A++KA ELE+F         +  E  +KR       +  +G    +
Sbjct: 849 VAELANFPRHVIECAKQKALELEEFQNIGKPQECDEMEPAAKR----CYLEREQGEKIIQ 908

Query: 914 QFLEEFSNLPLDKMDLKEALQQVSQLR 926
           +FL +   +P  +M  +   +++ QL+
Sbjct: 909 EFLSKVKQVPFTEMSEESITRKLKQLK 912

[Close]

BLAST of Cmc02g0055611 vs. ExPASy Swiss-Prot
Match: P43247 (DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 1.5e-204
Identity = 395/927 (42.61%), Postives = 582/927 (62.78%), Query Frame = 0


Query: 14  LKLDAKQAQGFLAFFKTLP-PDSRAVRFFDRRDYYTAHSDNAVFIAKTYYRTTTALRQLG 73
           L+L+     GF+ FF+ +P   S  VR FDR D+YTAH ++A+  A+  ++T   ++ +G
Sbjct: 9   LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68

Query: 74  NA-SESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSN-------WRLIKSGSPGN 133
            A S++L SV +SK  FES  +DLLL R  + +E+Y+    N       W L    SPGN
Sbjct: 69  PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 128

Query: 134 IGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSHFTNV 193
           +  FED+LF NN+M  S  ++ +     D    VG+GYVD T+R +G+ EF ++  F+N+
Sbjct: 129 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 188

Query: 194 ESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLSRLVK 253
           E+ L+ +G KEC+LP     +GD+  L  V+ + G+++TERK+++F  +D+ QDL+RL+K
Sbjct: 189 EALLIQIGPKECVLP-GGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 248

Query: 254 GSV-EPVRDLV---SGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 313
           G   E +          + A ++L A++ + ELL+D+SN+G + +  ++   YM+LD AA
Sbjct: 249 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 308

Query: 314 IRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQA 373
           +RALN+ + S  D   + SL  L+N+ C    G+RL++ W+KQPL+D   I  RL+LV+A
Sbjct: 309 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 368

Query: 374 FVEDTALCQDLRQH-LKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYE 433
           FVED+ L Q L++  L+R  D+ RL    +++ A LQ   +LYQ   +LP +  ALE YE
Sbjct: 369 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 428

Query: 434 GQFSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKN 493
           G+  +L+   ++  L     +   +KF  ++ET +D+DQ+EN E+++  S+D  LS+L+ 
Sbjct: 429 GRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 488

Query: 494 VQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIV 553
           V + +E+++Q      A  L L   K +KLD   QFG+ FR+T KEE  +R   + +F  
Sbjct: 489 VMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 548

Query: 554 LETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSE 613
           ++ +K+GVKFTN++L  L ++Y K   EY+  Q  +V  ++  +S + E  + L ++L+ 
Sbjct: 549 VDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAH 608

Query: 614 LDVLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGK 673
           LD ++ FA ++++ P PY RP I    +G IIL+ SRH CVE QD V FIPND    + K
Sbjct: 609 LDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDK 668

Query: 674 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRG 733
             F IITGPNMGGKST+IRQ GV +LMAQ+GCFVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 669 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 728

Query: 734 VSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFA 793
           VSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI +++   I A  +FA
Sbjct: 729 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFA 788

Query: 794 THFHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIH 853
           THFHELTALA+          Q+  V N HV+A   ++   LTMLY+V+ G CDQSFGIH
Sbjct: 789 THFHELTALAN----------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIH 848

Query: 854 VAEFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARAR 913
           VAE ANFP  V+A A++KA ELE+F    T+   +  E  +KR+      +  +G     
Sbjct: 849 VAELANFPRHVIACAKQKALELEEFQNIGTSLGCDEAEPAAKRR----CLEREQGEKIIL 908

Query: 914 QFLEEFSNLPLDKMDLKEALQQVSQLR 926
           +FL +   +P   M  +    ++ QL+
Sbjct: 909 EFLSKVKQVPFTAMSEESISAKLKQLK 912

[Close]

BLAST of Cmc02g0055611 vs. ExPASy TrEMBL
Match: A0A5A7UX35 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003570 PE=3 SV=1)

HSP 1 Score: 1866.3 bits (4833), Expect = 0.0e+00
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. ExPASy TrEMBL
Match: A0A1S3BX85 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494106 PE=3 SV=1)

HSP 1 Score: 1866.3 bits (4833), Expect = 0.0e+00
Identity = 942/942 (100.00%), Postives = 942/942 (100.00%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. ExPASy TrEMBL
Match: A0A5D3DX26 (DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00250 PE=3 SV=1)

HSP 1 Score: 1863.2 bits (4825), Expect = 0.0e+00
Identity = 940/942 (99.79%), Postives = 941/942 (99.89%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MDDNVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MDDNVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKR MGMAEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. ExPASy TrEMBL
Match: A0A0A0LS02 (DNA_MISMATCH_REPAIR_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G020900 PE=3 SV=1)

HSP 1 Score: 1833.9 bits (4749), Expect = 0.0e+00
Identity = 922/942 (97.88%), Postives = 933/942 (99.04%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           M DNVDE++KLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT
Sbjct: 1   MGDNVDEQTKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGNASE+LSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNASEALSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKR MGMAEF+DDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFIDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVG+GCKECLLPLESGKSGDIKPLH+VLTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGIGCKECLLPLESGKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RL+KGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLIKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF
Sbjct: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKYLEFLETCTDNDHLNKFNNLVETA+DLDQLENGEYMI+SSYD TLSKLKNVQ
Sbjct: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAVDLDQLENGEYMIASSYDDTLSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVF+PLAELLSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFRPLAELLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSS+EGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDLDSHGKQM GVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLDSHGKQMAGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFS DTTA  TNGKEIP KRKREFSSDDMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSIDTTASTTNGKEIPLKRKREFSSDDMSKGVERARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL
Sbjct: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. ExPASy TrEMBL
Match: A0A6J1E222 (DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 PE=3 SV=1)

HSP 1 Score: 1768.1 bits (4578), Expect = 0.0e+00
Identity = 890/942 (94.48%), Postives = 915/942 (97.13%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           MD+NVDE+SKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYT H D+AVFIAKT
Sbjct: 1   MDENVDEQSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTVHGDSAVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YYRTTTALRQLGN SE+LSSVSVSKNMFESIARDLLLER DHTLELYEGSGSNWRLIKSG
Sbjct: 61  YYRTTTALRQLGNVSEALSSVSVSKNMFESIARDLLLERMDHTLELYEGSGSNWRLIKSG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQDSPAIVAL P FR+NGCIVGL YVDLTKR MG+AEFLDDSH
Sbjct: 121 SPGNIGSFEDVLFANNEMQDSPAIVALLPNFRENGCIVGLAYVDLTKRLMGLAEFLDDSH 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTNVESALVGLGCKECLLPL+SGK GD+KPLH+ LTKCGVMLTERKKSEFKMRDLVQDLS
Sbjct: 181 FTNVESALVGLGCKECLLPLDSGKFGDLKPLHDALTKCGVMLTERKKSEFKMRDLVQDLS 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKGSVEPVRD+VSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA
Sbjct: 241 RLVKGSVEPVRDMVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           +RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEI+SRLDLVQAF
Sbjct: 301 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDLVQAF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VEDTAL QDLRQHLKRISDIERLT YLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ
Sbjct: 361 VEDTALRQDLRQHLKRISDIERLTQYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           FSSLIKEKY+E LE  TDNDHLNKFNNLVETA+DLDQLENGEYMISSSYD  LSKLKNVQ
Sbjct: 421 FSSLIKEKYMECLEIWTDNDHLNKFNNLVETAVDLDQLENGEYMISSSYDPALSKLKNVQ 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           ESIEQQIQDLHRQVANDLDL VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE
Sbjct: 481 ESIEQQIQDLHRQVANDLDLAVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQKIVEEYK+ QK+LVHRVIETASSFNEVF+PLAE+LSELD
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKNFQKELVHRVIETASSFNEVFRPLAEMLSELD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRG+SW
Sbjct: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGESW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
Sbjct: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALAHGNTDL+ HGKQ+VGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAHGNTDLEPHGKQIVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFPSSVVALAREKAAELEDFSTD+T   T GKEIPSKRKREF S+DMSKGV RARQF
Sbjct: 841 EFANFPSSVVALAREKAAELEDFSTDSTTSATTGKEIPSKRKREFGSEDMSKGVGRARQF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           LEEF+NLPLDKMDLKEALQQVSQLRDGLKKDA +SNWLQQFL
Sbjct: 901 LEEFANLPLDKMDLKEALQQVSQLRDGLKKDAANSNWLQQFL 942

[Close]

BLAST of Cmc02g0055611 vs. TAIR 10
Match: AT3G18524.1 (MUTS homolog 2 )

HSP 1 Score: 1427.5 bits (3694), Expect = 0.0e+00
Identity = 694/942 (73.67%), Postives = 826/942 (87.69%), Query Frame = 0


Query: 1   MDDNVDERSKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKT 60
           M+ N +E++KLPELKLDAKQAQGFL+F+KTLP D+RAVRFFDR+DYYTAH +N+VFIAKT
Sbjct: 1   MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT 60

Query: 61  YYRTTTALRQLGNASESLSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSG 120
           YY TTTALRQLG+ S +LSSVS+S+NMFE+IARDLLLER DHT+ELYEGSGSNWRL+K+G
Sbjct: 61  YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG 120

Query: 121 SPGNIGSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRAMGMAEFLDDSH 180
           SPGNIGSFEDVLFANNEMQD+P +V++FP F D  C++G+ YVDLT+R +G+AEFLDDS 
Sbjct: 121 SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR 180

Query: 181 FTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLTKCGVMLTERKKSEFKMRDLVQDLS 240
           FTN+ES+L+ LG KEC+ P ESGKS + K L++ L +C VM+TERKK EFK RDL  DL 
Sbjct: 181 FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK 240

Query: 241 RLVKGSVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAA 300
           RLVKG++EPVRDLVSGF+ A  ALGALL+++ELL++E NYGN+ I++Y++  +MRLDSAA
Sbjct: 241 RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA 300

Query: 301 IRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF 360
           +RALNV+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+ EI +RLD+VQ F
Sbjct: 301 MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF 360

Query: 361 VEDTALCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQ 420
           VE+  L QDLRQHLKRISD+ERL   LE+RR GLQHI+KLYQS+IRLPFIK A++ Y G+
Sbjct: 361 VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE 420

Query: 421 FSSLIKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMISSSYDATLSKLKNVQ 480
           F+SLI E+YL+ LE  +D DHL KF +LVE ++DLDQLENGEYMISSSYD  L+ LK+ +
Sbjct: 421 FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK 480

Query: 481 ESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLE 540
           E +EQQI +LH++ A +LDL VDKALKLDK  QFGHVFRITKKEEPK+RKKL+T FIVLE
Sbjct: 481 ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE 540

Query: 541 TRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELD 600
           TRKDGVKFTNTKLKKLGDQYQ +V++Y+SCQK+LV RV+ET +SF+EVF+ LA LLSE+D
Sbjct: 541 TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD 600

Query: 601 VLLGFADLASSCPTPYTRPDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW 660
           VLL FADLA+SCPTPY RP+ITSSD G+I+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSW
Sbjct: 601 VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW 660

Query: 661 FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS 720
           FQI+TGPNMGGKSTFIRQVGV +LMAQVG FVPCDKASIS+RDCIFARVGAGDCQLRGVS
Sbjct: 661 FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS 720

Query: 721 TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH 780
           TFMQEMLETASILKGA++KSLIIIDELGRGTSTYDGFGLAWAICEHLV+V +APTLFATH
Sbjct: 721 TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH 780

Query: 781 FHELTALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVA 840
           FHELTALA  N+++  +    VGVANFHVSAHID+ + KLTMLYKVEPGACDQSFGIHVA
Sbjct: 781 FHELTALAQANSEVSGN---TVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVA 840

Query: 841 EFANFPSSVVALAREKAAELEDFSTDTTAPNTNGKEIPSKRKREFSSDDMSKGVARARQF 900
           EFANFP SVVALAREKAAELEDFS  +     N +E   ++ RE   D++S+G  RA +F
Sbjct: 841 EFANFPESVVALAREKAAELEDFSPSSMI--INNEESGKRKSREDDPDEVSRGAERAHKF 900

Query: 901 LEEFSNLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 943
           L+EF+ +PLDKM+LK++LQ+V +++D L+KDA D +WL+QFL
Sbjct: 901 LKEFAAIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937

[Close]

BLAST of Cmc02g0055611 vs. TAIR 10
Match: AT3G24495.1 (MUTS homolog 7 )

HSP 1 Score: 213.8 bits (543), Expect = 6.1e-55
Identity = 195/737 (26.46%), Postives = 311/737 (42.20%), Query Frame = 0


Query: 157  IVGLGYVDLTKRAMGMAEFLDDSHFTNVESALVGLGCKECLLPLESGKSGDIKPLHNVLT 216
            + G  +VD       +    DD+    + + L+ +  KE L     G S + +      T
Sbjct: 406  VYGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVLYD-SKGLSREAQKALRKYT 465

Query: 217  KCGVMLTERKKSEFKMRDL-------VQDLSRLVKGSVEPVRDLVSGF---EFAPAALGA 276
              G    +       M D        + + +   KGS E     V G    + A +ALG 
Sbjct: 466  LTGSTAVQLAPVPQVMGDTDAAGVRNIIESNGYFKGSSESWNCAVDGLNECDVALSALGE 525

Query: 277  LLAYAELLADESNYGNYNIQKYNL-DSYMRLDSAAIRALNVLESKTDANKNFSLFGLMNR 336
            L+ +   L  E    + +I  Y +    +R+D   +  L +  +  D   + +L+  ++ 
Sbjct: 526  LINHLSRLKLEDVLKHGDIFPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTLYKYLD- 585

Query: 337  TCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAFVEDTALCQDLRQHLKRISDIERLTH 396
             C +  GKRLL  W+  PL DV+ I+ RLD+V+ F  ++   Q   Q+L ++ D+ERL  
Sbjct: 586  NCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQITGQYLHKLPDLERL-- 645

Query: 397  YLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQFSSLIKEKYLEFLETCTDNDHLNKF 456
                                 L  IK+++ +      +L+ +K L+          +  F
Sbjct: 646  ---------------------LGRIKSSVRSSASVLPALLGKKVLK--------QRVKAF 705

Query: 457  NNLVE---TAID-LDQLENGEYMISSSYDATLSKLKNVQESIEQQIQDLHRQVANDLDLP 516
              +V+   + ID L  L+    M+S  Y      +   +  +E  +     + A D D P
Sbjct: 706  GQIVKGFRSGIDLLLALQKESNMMSLLYKLCKLPILVGKSGLELFLSQF--EAAIDSDFP 765

Query: 517  VDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDGVKFTNTKLKKLGDQYQ 576
                                                                     Q Q
Sbjct: 766  -------------------------------------------------------NYQNQ 825

Query: 577  KIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLSELDVLLGFADLAS----SCPTPYT 636
             + +E       L+   IE A+ ++EV       +S LDVL  FA  AS    S   P  
Sbjct: 826  DVTDENAETLTILIELFIERATQWSEVI----HTISCLDVLRSFAIAASLSAGSMARPVI 885

Query: 637  RPDITSSDEGN------IILEGSRHPCVEAQDWVNFIPNDCKLVRGK-------SWFQII 696
             P+  ++D+        + ++G  HP   A D    +PND  L   +           ++
Sbjct: 886  FPESEATDQNQKTKGPILKIQGLWHPFAVAADGQLPVPNDILLGEARRSSGSIHPRSLLL 945

Query: 697  TGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQ 756
            TGPNMGGKST +R   + ++ AQ+GC+VPC+   IS+ D IF R+GA D  + G STF+ 
Sbjct: 946  TGPNMGGKSTLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTFLV 1005

Query: 757  EMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHEL 816
            E  ETAS+L+ AT+ SL+I+DELGRGTST+DG+ +A+++  HLVE ++   LFATH+H L
Sbjct: 1006 ECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPL 1046

Query: 817  TALAHGNTDLDSHGKQMVGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFAN 862
            T     +  + S  K M               +  L  LY++  GAC +S+G+ VA  A 
Sbjct: 1066 TKEFASHPRVTS--KHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESYGLQVALMAG 1046

[Close]

BLAST of Cmc02g0055611 vs. TAIR 10
Match: AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )

HSP 1 Score: 204.5 bits (519), Expect = 3.7e-52
Identity = 177/631 (28.05%), Postives = 291/631 (46.12%), Query Frame = 0


Query: 280  YGNYNIQKYNLDSYMRLDSAAIRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMW 339
            Y   + +  + ++ M L +  ++ L V+++ +D +++ SLF  MN T T   G RLL  W
Sbjct: 406  YQGASFRSLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTV-YGSRLLRHW 465

Query: 340  LKQPLLDVKEISSRLDLV----------------QAFVEDTA-----------LCQDLRQ 399
            +  PL D   IS+RLD V                   VE+ +           +   +  
Sbjct: 466  VTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLT 525

Query: 400  HLKRISDIER-LTHYLEKRRAGLQHI-----VKLYQSSIRLPFIKNALENYEGQFS---S 459
             + R SDI+R +T    +     + I     + L    I+   IK   E    Q +   S
Sbjct: 526  AMSRSSDIQRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRS 585

Query: 460  LIKEKYLEFLETCTDNDHLNKFNNLV--ETAIDLDQLENGEYMISSSYDATLSKLKN--- 519
             +  K +  + +    D+  K  + +  E A+  D L+    + SS     L++ +    
Sbjct: 586  TLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDLLD--ILITSSDQFPELAEARQAVL 645

Query: 520  -VQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFI 579
             ++E ++  I    +++A              +  +F  V  IT   E  V  K+  +++
Sbjct: 646  VIREKLDSSIASFRKKLA-------------IRNLEFLQVSGITHLIELPVDSKVPMNWV 705

Query: 580  VLETRKDGVKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFKPLAELLS 639
             + + K  +++   ++    D+     E      +      +++ S +   FK   + L+
Sbjct: 706  KVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALA 765

Query: 640  ELDVLLGFADLASSCPTPYTRPDITSSDEG-NIILEGSRHPCVEAQDWVNFIPNDCKLVR 699
             LD L   + L+ +    Y RP+     E   I ++  RHP +E     NF+PND  L  
Sbjct: 766  ALDCLHSLSTLSRN--KNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHA 825

Query: 700  GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 759
               + QIITGPNMGGKS +IRQV +  +MAQVG FVP   A + V D +F R+GA D   
Sbjct: 826  EGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQ 885

Query: 760  RGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTL 819
             G STF++E+ E + I++  + +SL+I+DELGRGTST+DG  +A+A  +HL+   +   L
Sbjct: 886  HGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVL 945

Query: 820  FATHFHELTALAHGNTDLDSHGKQMVGVANFHVS-----AHIDSSNH-KLTMLYKVEPGA 862
            F TH+ E+  +++G             V  +HVS         S +H  +T LYK+  G 
Sbjct: 946  FVTHYPEIAEISNGFPG---------SVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGL 1005

[Close]

BLAST of Cmc02g0055611 vs. TAIR 10
Match: AT4G02070.1 (MUTS homolog 6 )

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-51
Identity = 182/644 (28.26%), Postives = 298/644 (46.27%), Query Frame = 0


Query: 260  APAALGALLAY-AELLADES--NYGNYNIQKY------NLDSYMRLDSAAIRALNVLESK 319
            A +ALG  + Y  +   DES   +  +    Y      N   +M LD+AA+  L + E+ 
Sbjct: 653  ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 712

Query: 320  TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF-VEDTALCQD 379
             +   + +L+  +N+ C    GKRLL  WL +PL + + I  R D V     E+     +
Sbjct: 713  RNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLE 772

Query: 380  LRQHLKRISDIERLTHYL-----EKRRAGLQHIVKLYQSSIR---LPFIK--NALENYEG 439
             R+ L R+ D+ERL   +        R G +  V LY+ + +     FI      E    
Sbjct: 773  FRKSLSRLPDMERLIARMFSSIEASGRNGDK--VVLYEDTAKKQVQEFISTLRGCETMAE 832

Query: 440  QFSSL-------IKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMI-----SS 499
              SSL          + L  L       +++      + A D  +  N   +I       
Sbjct: 833  ACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADE 892

Query: 500  SYDATLSKLKNVQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 559
             YD     ++  + S+++ +++  R++  D  +     + + K             E P+
Sbjct: 893  EYDCACKTVEEFESSLKKHLKE-QRKLLGDASI---NYVTVGKDEYL--------LEVPE 952

Query: 560  VRKKLSTHFIVLETRKDGV-KFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFN 619
                   H   L + K GV ++    +KKL  +  +   E +S  K +  R+I       
Sbjct: 953  SLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQ 1012

Query: 620  EVFKPLAELLSELDVLLGFADLASSCPTPYTRPDI---TSSDEGNIILEGSRHPCVEAQD 679
            E ++ L    +ELDVL+  A  + S      RP I   TS    ++   G  HP +    
Sbjct: 1013 EKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDS 1072

Query: 680  W--VNFIPNDCKLVRG-KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASIS 739
                +F+PN+ K+    K+ F ++TGPNMGGKST +RQV + +++AQ+G  VP +   +S
Sbjct: 1073 LGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVS 1132

Query: 740  VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLA 799
              D I  R+GA D  + G STF+ E+ ETA +L  AT  SL+++DELGRGT+T DG  +A
Sbjct: 1133 PVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIA 1192

Query: 800  WAICEHLVEVIKAPTLFATHFHELTALAHGNTDLDSHGKQMVGVANFHVSAHID---SSN 859
             ++ EH +E ++    F+TH+H L      + D  ++ K    V+  H++  I       
Sbjct: 1193 ESVLEHFIEKVQCRGFFSTHYHRL------SVDYQTNPK----VSLCHMACQIGEGIGGV 1252

Query: 860  HKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELE 862
             ++T LY++ PGAC +S+G++VA  A  P  V+  A  K+ E E
Sbjct: 1253 EEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFE 1271

[Close]

BLAST of Cmc02g0055611 vs. TAIR 10
Match: AT4G02070.2 (MUTS homolog 6 )

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-51
Identity = 182/644 (28.26%), Postives = 298/644 (46.27%), Query Frame = 0


Query: 260  APAALGALLAY-AELLADES--NYGNYNIQKY------NLDSYMRLDSAAIRALNVLESK 319
            A +ALG  + Y  +   DES   +  +    Y      N   +M LD+AA+  L + E+ 
Sbjct: 650  ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 709

Query: 320  TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAF-VEDTALCQD 379
             +   + +L+  +N+ C    GKRLL  WL +PL + + I  R D V     E+     +
Sbjct: 710  RNGGYSGTLYAQLNQ-CITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLE 769

Query: 380  LRQHLKRISDIERLTHYL-----EKRRAGLQHIVKLYQSSIR---LPFIK--NALENYEG 439
             R+ L R+ D+ERL   +        R G +  V LY+ + +     FI      E    
Sbjct: 770  FRKSLSRLPDMERLIARMFSSIEASGRNGDK--VVLYEDTAKKQVQEFISTLRGCETMAE 829

Query: 440  QFSSL-------IKEKYLEFLETCTDNDHLNKFNNLVETAIDLDQLENGEYMI-----SS 499
              SSL          + L  L       +++      + A D  +  N   +I       
Sbjct: 830  ACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADE 889

Query: 500  SYDATLSKLKNVQESIEQQIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 559
             YD     ++  + S+++ +++  R++  D  +     + + K             E P+
Sbjct: 890  EYDCACKTVEEFESSLKKHLKE-QRKLLGDASI---NYVTVGKDEYL--------LEVPE 949

Query: 560  VRKKLSTHFIVLETRKDGV-KFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFN 619
                   H   L + K GV ++    +KKL  +  +   E +S  K +  R+I       
Sbjct: 950  SLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQ 1009

Query: 620  EVFKPLAELLSELDVLLGFADLASSCPTPYTRPDI---TSSDEGNIILEGSRHPCVEAQD 679
            E ++ L    +ELDVL+  A  + S      RP I   TS    ++   G  HP +    
Sbjct: 1010 EKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDS 1069

Query: 680  W--VNFIPNDCKLVRG-KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASIS 739
                +F+PN+ K+    K+ F ++TGPNMGGKST +RQV + +++AQ+G  VP +   +S
Sbjct: 1070 LGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVS 1129

Query: 740  VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLA 799
              D I  R+GA D  + G STF+ E+ ETA +L  AT  SL+++DELGRGT+T DG  +A
Sbjct: 1130 PVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIA 1189

Query: 800  WAICEHLVEVIKAPTLFATHFHELTALAHGNTDLDSHGKQMVGVANFHVSAHID---SSN 859
             ++ EH +E ++    F+TH+H L      + D  ++ K    V+  H++  I       
Sbjct: 1190 ESVLEHFIEKVQCRGFFSTHYHRL------SVDYQTNPK----VSLCHMACQIGEGIGGV 1249

Query: 860  HKLTMLYKVEPGACDQSFGIHVAEFANFPSSVVALAREKAAELE 862
             ++T LY++ PGAC +S+G++VA  A  P  V+  A  K+ E E
Sbjct: 1250 EEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFE 1268

The following BLAST results are available for this feature:

BLAST of Cmc02g0055611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453367.1	0.0e+00	100.00	PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Cucumis melo] >KAA005805...	[more]
TYK28397.1	0.0e+00	99.79	DNA mismatch repair protein MSH2 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011648756.1	0.0e+00	97.88	DNA mismatch repair protein MSH2 [Cucumis sativus] >KGN63799.1 hypothetical prot...	[more]
XP_038890004.1	0.0e+00	95.97	DNA mismatch repair protein MSH2 [Benincasa hispida]	[more]
XP_023516636.1	0.0e+00	94.80	DNA mismatch repair protein MSH2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc02g0055611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24617	0.0e+00	73.67	DNA mismatch repair protein MSH2 OS=Arabidopsis thaliana OX=3702 GN=MSH2 PE=1 SV...	[more]
Q9XGC9	0.0e+00	69.36	DNA mismatch repair protein MSH2 OS=Zea mays OX=4577 GN=MUS1 PE=3 SV=1	[more]
Q5XXB5	5.3e-205	42.67	DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV...	[more]
Q3MHE4	1.2e-204	42.83	DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1	[more]
P43247	1.5e-204	42.61	DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1	[more]

BLAST of Cmc02g0055611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UX35	0.0e+00	100.00	DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BX85	0.0e+00	100.00	DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]
A0A5D3DX26	0.0e+00	99.79	DNA mismatch repair protein MSH2 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LS02	0.0e+00	97.88	DNA_MISMATCH_REPAIR_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A6J1E222	0.0e+00	94.48	DNA mismatch repair protein MSH2 OS=Cucurbita moschata OX=3662 GN=LOC111430121 P...	[more]

BLAST of Cmc02g0055611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18524.1	0.0e+00	73.67	MUTS homolog 2	[more]
AT3G24495.1	6.1e-55	26.46	MUTS homolog 7	[more]
AT4G25540.1	3.7e-52	28.05	homolog of DNA mismatch repair protein MSH3	[more]
AT4G02070.1	1.1e-51	28.26	MUTS homolog 6	[more]
AT4G02070.2	1.1e-51	28.26	MUTS homolog 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 473..493
None	No IPR available	COILS	Coil	Coil	coord: 553..573
None	No IPR available	COILS	Coil	Coil	coord: 911..931
None	No IPR available	GENE3D	1.10.1420.10		coord: 294..522 e-value: 3.6E-57 score: 196.2 coord: 523..616 e-value: 4.9E-9 score: 38.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 865..890
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 876..890
None	No IPR available	CDD	cd03285	ABC_MSH2_euk	coord: 630..861 e-value: 2.33714E-149 score: 438.734
IPR007696	DNA mismatch repair protein MutS, core	SMART	SM00533	DNAend	coord: 314..642 e-value: 2.5E-103 score: 359.3
IPR007696	DNA mismatch repair protein MutS, core	PFAM	PF05192	MutS_III	coord: 300..606 e-value: 3.8E-33 score: 116.9
IPR000432	DNA mismatch repair protein MutS, C-terminal	SMART	SM00534	mutATP5	coord: 659..858 e-value: 8.9E-119 score: 410.6
IPR000432	DNA mismatch repair protein MutS, C-terminal	PFAM	PF00488	MutS_V	coord: 662..861 e-value: 4.3E-81 score: 271.4
IPR000432	DNA mismatch repair protein MutS, C-terminal	PROSITE	PS00486	DNA_MISMATCH_REPAIR_2	coord: 740..756
IPR016151	DNA mismatch repair protein MutS, N-terminal	GENE3D	3.40.1170.10	DNA repair protein MutS, domain I	coord: 7..121 e-value: 8.5E-33 score: 114.9
IPR036678	MutS, connector domain superfamily	GENE3D	3.30.420.110	MutS, connector domain	coord: 122..291 e-value: 1.3E-46 score: 160.4
IPR036678	MutS, connector domain superfamily	SUPERFAMILY	53150	DNA repair protein MutS, domain II	coord: 144..309
IPR011184	DNA mismatch repair Msh2-type	PIRSF	PIRSF005813	MSH2	coord: 6..942 e-value: 0.0 score: 1246.6
IPR007861	DNA mismatch repair protein MutS, clamp	PFAM	PF05190	MutS_IV	coord: 469..565 e-value: 1.0E-18 score: 67.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 617..939 e-value: 3.8E-101 score: 340.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 616..862
IPR007695	DNA mismatch repair protein MutS-like, N-terminal	PFAM	PF01624	MutS_I	coord: 23..128 e-value: 2.7E-13 score: 50.2
IPR007860	DNA mismatch repair protein MutS, connector domain	PFAM	PF05188	MutS_II	coord: 152..283 e-value: 6.6E-17 score: 62.1
IPR045076	DNA mismatch repair MutS family	PANTHER	PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	coord: 24..924
IPR032642	DNA mismatch repair protein Msh2	PANTHER	PTHR11361:SF35	DNA MISMATCH REPAIR PROTEIN MSH2	coord: 24..924
IPR036187	DNA mismatch repair protein MutS, core domain superfamily	SUPERFAMILY	48334	DNA repair protein MutS, domain III	coord: 297..611

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0055611.1	Cmc02g0055611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006298	mismatch repair
biological_process	GO:0006312	mitotic recombination
cellular_component	GO:0032301	MutSalpha complex
cellular_component	GO:0032300	mismatch repair complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140664	ATP-dependent DNA damage sensor activity
molecular_function	GO:0030983	mismatched DNA binding
molecular_function	GO:0003677	DNA binding