Cmc02g0053851 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0053851
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 21186108 .. 21187831 (-)
RNA-Seq ExpressionCmc02g0053851
SyntenyCmc02g0053851
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGAATGCATAAAAAGCTCCCTCTATATAACGCAGCAAACCTATCTCTTTCCATCCCAAGATAACCTTATCTTTATTTGAGCAGATAAAGTTAGGAAATGAGATCCTCACAATTTATTTTCTTTTGCCTTCTCTTTACTTTCTTCTATCTTCGTTCAATGGATCTTTTGCATTCTCCACCTCGACTTTTCACCTCCGAAGGAAGACCTGCAAGAAAGTACCTTGGTACATCATTTTCCAACTATCCCAAATCCGAATATCACGAGGTATGCTACTTCTTTGTTTATTTTCTTTATATATTTATTTATTTCTGAATCTTTCAAGTACTTTTGACAATGGATTCCACCACCCTAAACATGCACTTTTGAGATTCCTTTATTTGTGGTCATGAATATGCCAAAATGCAGGTTCATGAAGACGAGTTCAATAGACCGTCTCCAAAAGATATGTCCTCCAACACACCTGAACATGAAGCAAGTATCAACAGCTTGGGGGAACTTATATACCACATTGACTATCATGGAGTGACAACACATCCGAATCCAACACCAAAACATCCATAGCCATAGGAAACATATCAACTTCTAAGATGAAATGAATTATTCATACATGTACTGCACTTCAAATACTCACTTTTGTTTTACAATCTATCAAATGCTAATTTTTTTCATGCTACAATTATATACAAGGTGTAACCTTCCCCCCAAAATCGACACCTAGTAGCAACAGGCTCCTTACCCAGAGAACCATTGCAGATAAGTCATGGTTGAGCGCCTTGAGCTTGCAACTTGCCAAAATATATGTGATTCTGTGAACATGAACCTGAATTGCTTGAAATAGGAAATGTCGTTGGGAGAGAACCAGAGACATTAATCACTCGTAGTTCAATGCAACGAAATCATTCCATTCGTATATTGACTTCTGACCTTTCTAAACCTCTTGAGCAACTTTTGGTAGCACTCCACAGCATTCTTAAATCTTACTTCCCTACAAAATCTAGATTTTACCTCCACAAATGTAGTTCCTATCTGTTCTCTATGATTAACACAAGTAGATAACAGATCTCTAATACCAATTGAAGGCATGGTCCATTTATCATCTTTGATGCTTTCTTTTCCATCTACGTTGAGAAGTCTGAGCCATCTCATGCGATGAAAGGGGTCTTCGTCTTTCTCAACTGAAATTTTTAGAGCAGCAAGCACTTCCGAGAATTTTGACTCACTACTGATTTTATCTAACAATCTACTGAAAGTAGTCTTCTGGATCAGGCCAAGCCTGTCATTAGTTTCTGAGGGCAAAGAACATGCTGCTACCAAGCAAGCCTTTCGAAAGTTATGATCAGAGACACTAATTAACCAAATTGCAAAGTGCAGTAGTTGTACAGACATAGTTCCAAACAAAGTATCACATTGCTTTGGGTTATGACTCCAATTCCAAGAATAGACTGCAGTATGAACAAATCCTTCCCACCTGAAGTAGGATTAGAAGGGTCAGAACAAAGTAAATAAATGATAAATTAGACTAGTCAATTCACTCCAATTTTTTGGGGCTTTTATGTTTCAAAAAAAAATTATCCGACTCACAAAATAGAGACCTCAAACAATTCAATAAATAAAAAAAGCTGAGAGATTTTGATGTTCATTGAAGTAGTGGTCTACAAGACAACAGGCGTCTTATTTTATCCTTGGTTTAAAATACAATCATTCTACCAACCTAAGCCAGCT

mRNA sequence

TGAGAATGCATAAAAAGCTCCCTCTATATAACGCAGCAAACCTATCTCTTTCCATCCCAAGATAACCTTATCTTTATTTGAGCAGATAAAGTTAGGAAATGAGATCCTCACAATTTATTTTCTTTTGCCTTCTCTTTACTTTCTTCTATCTTCGTTCAATGGATCTTTTGCATTCTCCACCTCGACTTTTCACCTCCGAAGGAAGACCTGCAAGAAAGTACCTTGGTACATCATTTTCCAACTATCCCAAATCCGAATATCACGAGGTTCATGAAGACGAGTTCAATAGACCGTCTCCAAAAGATATGTCCTCCAACACACCTGAACATGAAGCAAGTATCAACAGCTTGGGGGAACTTATATACCACATTGACTATCATGGAGTGACAACACATCCGAATCCAACACCAAAACATCCATAGCCATAGGAAACATATCAACTTCTAAGATGAAATGAATTATTCATACATGTACTGCACTTCAAATACTCACTTTTGTTTTACAATCTATCAAATGCTAATTTTTTTCATGCTACAATTATATACAAGGTGTAACCTTCCCCCCAAAATCGACACCTAGTAGCAACAGGCTCCTTACCCAGAGAACCATTGCAGATAAGTCATGGTTGAGCGCCTTGAGCTTGCAACTTGCCAAAATATATGTGATTCTGTGAACATGAACCTGAATTGCTTGAAATAGGAAATGTCGTTGGGAGAGAACCAGAGACATTAATCACTCGTAGTTCAATGCAACGAAATCATTCCATTCGTATATTGACTTCTGACCTTTCTAAACCTCTTGAGCAACTTTTGGTAGCACTCCACAGCATTCTTAAATCTTACTTCCCTACAAAATCTAGATTTTACCTCCACAAATGTAGTTCCTATCTGTTCTCTATGATTAACACAAGTAGATAACAGATCTCTAATACCAATTGAAGGCATGGTCCATTTATCATCTTTGATGCTTTCTTTTCCATCTACGTTGAGAAGTCTGAGCCATCTCATGCGATGAAAGGGGTCTTCGTCTTTCTCAACTGAAATTTTTAGAGCAGCAAGCACTTCCGAGAATTTTGACTCACTACTGATTTTATCTAACAATCTACTGAAAGTAGTCTTCTGGATCAGGCCAAGCCTGTCATTAGTTTCTGAGGGCAAAGAACATGCTGCTACCAAGCAAGCCTTTCGAAAGTTATGATCAGAGACACTAATTAACCAAATTGCAAAGTGCAGTAGTTGTACAGACATAGTTCCAAACAAAGTATCACATTGCTTTGGGTTATGACTCCAATTCCAAGAATAGACTGCAGTATGAACAAATCCTTCCCACCTGAAGTAGGATTAGAAGGGTCAGAACAAAGTAAATAAATGATAAATTAGACTAGTCAATTCACTCCAATTTTTTGGGGCTTTTATGTTTCAAAAAAAAATTATCCGACTCACAAAATAGAGACCTCAAACAATTCAATAAATAAAAAAAGCTGAGAGATTTTGATGTTCATTGAAGTAGTGGTCTACAAGACAACAGGCGTCTTATTTTATCCTTGGTTTAAAATACAATCATTCTACCAACCTAAGCCAGCT

Coding sequence (CDS)

ATGAGATCCTCACAATTTATTTTCTTTTGCCTTCTCTTTACTTTCTTCTATCTTCGTTCAATGGATCTTTTGCATTCTCCACCTCGACTTTTCACCTCCGAAGGAAGACCTGCAAGAAAGTACCTTGGTACATCATTTTCCAACTATCCCAAATCCGAATATCACGAGGTTCATGAAGACGAGTTCAATAGACCGTCTCCAAAAGATATGTCCTCCAACACACCTGAACATGAAGCAAGTATCAACAGCTTGGGGGAACTTATATACCACATTGACTATCATGGAGTGACAACACATCCGAATCCAACACCAAAACATCCATAG

Protein sequence

MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP
Homology
BLAST of Cmc02g0053851 vs. NCBI nr
Match: KGN65505.1 (hypothetical protein Csa_019778 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-44
Identity = 94/107 (87.85%), Postives = 96/107 (89.72%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHED 60
           MRSS FIFFCLLFTFFYLRSMDLLHSPP LFTSEGR ARKYLGTSFS       HEVHED
Sbjct: 1   MRSSHFIFFCLLFTFFYLRSMDLLHSPPPLFTSEGRQARKYLGTSFS-------HEVHED 60

Query: 61  EFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           EFNRPSPKD SSNTPE+EASINSLGEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  EFNRPSPKDTSSNTPEYEASINSLGELVYHIDYHGVTTHPNPTPKHP 100

BLAST of Cmc02g0053851 vs. NCBI nr
Match: KAA0058191.1 (uncharacterized protein E6C27_scaffold274G005110 [Cucumis melo var. makuwa] >TYK28554.1 uncharacterized protein E5676_scaffold629G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 5.7e-44
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 21  MDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEAS 80
           MDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEAS
Sbjct: 1   MDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEAS 60

Query: 81  INSLGELIYHIDYHGVTTHPNPTPKHP 108
           INSLGELIYHIDYHGVTTHPNPTPKHP
Sbjct: 61  INSLGELIYHIDYHGVTTHPNPTPKHP 87

BLAST of Cmc02g0053851 vs. NCBI nr
Match: XP_022921360.1 (uncharacterized protein LOC111429652 [Cucurbita moschata] >KAG7023353.1 hypothetical protein SDJN02_14378, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-32
Identity = 78/109 (71.56%), Postives = 88/109 (80.73%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEY--HEVH 60
           M SS F+FF LLF  FYL S+  L SPP    S GRPARKYLG+SFSN P+SE+   EVH
Sbjct: 1   MGSSHFLFFFLLFNLFYLLSVHRLQSPP---PSTGRPARKYLGSSFSN-PESEFLKVEVH 60

Query: 61  EDEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           EDEFNRPS KD+SSN PE+EASI+ +GEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  EDEFNRPSAKDISSNIPEYEASIDRMGELVYHIDYHGVTTHPNPTPKHP 105

BLAST of Cmc02g0053851 vs. NCBI nr
Match: KAG6589671.1 (hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-31
Identity = 77/109 (70.64%), Postives = 88/109 (80.73%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEY--HEVH 60
           M SS F+FF LLF  FYL S+  L SPP    S GRPARKYLG+SFSN P+SE+   +VH
Sbjct: 1   MGSSHFLFFFLLFNLFYLLSVHRLQSPP---PSTGRPARKYLGSSFSN-PESEFLKVKVH 60

Query: 61  EDEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           EDEFNRPS KD+SSN PE+EASI+ +GEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  EDEFNRPSAKDISSNIPEYEASIDRMGELVYHIDYHGVTTHPNPTPKHP 105

BLAST of Cmc02g0053851 vs. NCBI nr
Match: XP_023515382.1 (uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEY--HEVH 60
           M SS F+FF LLF  FYL S+  L SPP      GRPARKYLG+SFSN P+SE+   EVH
Sbjct: 1   MGSSHFLFFFLLFNLFYLLSVHRLQSPP---PYTGRPARKYLGSSFSN-PESEFLKVEVH 60

Query: 61  EDEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           +DEFNRPS KD+SSN PE+EASI+ +GEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  KDEFNRPSAKDISSNIPEYEASIDRMGELVYHIDYHGVTTHPNPTPKHP 105

BLAST of Cmc02g0053851 vs. ExPASy TrEMBL
Match: A0A0A0LUD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G427550 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.2e-45
Identity = 94/107 (87.85%), Postives = 96/107 (89.72%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHED 60
           MRSS FIFFCLLFTFFYLRSMDLLHSPP LFTSEGR ARKYLGTSFS       HEVHED
Sbjct: 1   MRSSHFIFFCLLFTFFYLRSMDLLHSPPPLFTSEGRQARKYLGTSFS-------HEVHED 60

Query: 61  EFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           EFNRPSPKD SSNTPE+EASINSLGEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  EFNRPSPKDTSSNTPEYEASINSLGELVYHIDYHGVTTHPNPTPKHP 100

BLAST of Cmc02g0053851 vs. ExPASy TrEMBL
Match: A0A5D3DYI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002010 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.8e-44
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 21  MDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEAS 80
           MDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEAS
Sbjct: 1   MDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEVHEDEFNRPSPKDMSSNTPEHEAS 60

Query: 81  INSLGELIYHIDYHGVTTHPNPTPKHP 108
           INSLGELIYHIDYHGVTTHPNPTPKHP
Sbjct: 61  INSLGELIYHIDYHGVTTHPNPTPKHP 87

BLAST of Cmc02g0053851 vs. ExPASy TrEMBL
Match: A0A6J1E5F1 (uncharacterized protein LOC111429652 OS=Cucurbita moschata OX=3662 GN=LOC111429652 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 78/109 (71.56%), Postives = 88/109 (80.73%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEY--HEVH 60
           M SS F+FF LLF  FYL S+  L SPP    S GRPARKYLG+SFSN P+SE+   EVH
Sbjct: 1   MGSSHFLFFFLLFNLFYLLSVHRLQSPP---PSTGRPARKYLGSSFSN-PESEFLKVEVH 60

Query: 61  EDEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           EDEFNRPS KD+SSN PE+EASI+ +GEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  EDEFNRPSAKDISSNIPEYEASIDRMGELVYHIDYHGVTTHPNPTPKHP 105

BLAST of Cmc02g0053851 vs. ExPASy TrEMBL
Match: A0A6J1JGL7 (uncharacterized protein LOC111484929 OS=Cucurbita maxima OX=3661 GN=LOC111484929 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 76/109 (69.72%), Postives = 86/109 (78.90%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYLRSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEY--HEVH 60
           M SS F+FF LLF  FYL S+  L SPP    S GRPARKYLG+ FSN P+SE+   EVH
Sbjct: 1   MGSSHFLFFFLLFNLFYLLSVHRLQSPP---LSTGRPARKYLGSLFSN-PESEFLKVEVH 60

Query: 61  EDEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
           EDE NRPS KD+SSN PE+EASI+ +GEL+YHIDYHGVTTHPNPTPKHP
Sbjct: 61  EDELNRPSAKDISSNIPEYEASIDRMGELVYHIDYHGVTTHPNPTPKHP 105

BLAST of Cmc02g0053851 vs. ExPASy TrEMBL
Match: A0A438CZ59 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_103994 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.0e-11
Identity = 50/111 (45.05%), Postives = 63/111 (56.76%), Query Frame = 0

Query: 1   MRSSQFIFFCLLFTFFYL---RSMDLLHSPPRLFTSEGRPARKYLGTSFSNYPKSEYHEV 60
           M+SS+ +  CLL T FYL    S     S   L    GR   + L  SFSN  K+EY E+
Sbjct: 3   MKSSRILLLCLLTTAFYLLHQHSSIASTSSSSLNFLPGRRHVRELSMSFSN-RKNEYQEI 62

Query: 61  HE-DEFNRPSPKDMSSNTPEHEASINSLGELIYHIDYHGVTTHPNPTPKHP 108
            + D+  +PS     S   EH +S  +L E++YHIDYHGV THP PTPKHP
Sbjct: 63  QDVDDEMKPSTMQEDSIAVEHRSSSENLEEIVYHIDYHGVMTHPTPTPKHP 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65505.11.5e-4487.85hypothetical protein Csa_019778 [Cucumis sativus][more]
KAA0058191.15.7e-44100.00uncharacterized protein E6C27_scaffold274G005110 [Cucumis melo var. makuwa] >TYK... [more]
XP_022921360.18.5e-3271.56uncharacterized protein LOC111429652 [Cucurbita moschata] >KAG7023353.1 hypothet... [more]
KAG6589671.12.5e-3170.64hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023515382.11.2e-3069.72uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LUD67.2e-4587.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G427550 PE=4 SV=1[more]
A0A5D3DYI52.8e-44100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1E5F14.1e-3271.56uncharacterized protein LOC111429652 OS=Cucurbita moschata OX=3662 GN=LOC1114296... [more]
A0A6J1JGL71.0e-3069.72uncharacterized protein LOC111484929 OS=Cucurbita maxima OX=3661 GN=LOC111484929... [more]
A0A438CZ594.0e-1145.05Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_103994 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0053851.1Cmc02g0053851.1mRNA