Cmc02g0053081 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0053081
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr02: 20523958 .. 20525385 (-)
RNA-Seq ExpressionCmc02g0053081
SyntenyCmc02g0053081
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCGTTCAATGATGTGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAATACCTTTCGAGTTATGGAGAGAACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGTCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTTATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACTTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCATGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGACGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAATAG

mRNA sequence

ATGGTTCGTTCAATGATGTGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAATACCTTTCGAGTTATGGAGAGAACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGTCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTTATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACTTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCATGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGACGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAATAG

Coding sequence (CDS)

ATGGTTCGTTCAATGATGTGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAATACCTTTCGAGTTATGGAGAGAACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGTCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTTATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACTTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCATGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGACGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAATAG

Protein sequence

MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
Homology
[Close]
BLAST of Cmc02g0053081 vs. NCBI nr
Match: KAA0058278.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 961.1 bits (2483), Expect = 3.6e-276
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA
Sbjct: 361 MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 420

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 421 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 480

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE
Sbjct: 481 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 540

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK
Sbjct: 541 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 600

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
Sbjct: 601 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 660

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 661 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 720

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE
Sbjct: 721 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 780

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
Sbjct: 781 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 835

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BLAST of Cmc02g0053081 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 936.4 bits (2419), Expect = 9.6e-269
Identity = 466/475 (98.11%), Postives = 466/475 (98.11%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPA
Sbjct: 521 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 641 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 701 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Sbjct: 761 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 820

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 881 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Sbjct: 941 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

[Close]
BLAST of Cmc02g0053081 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 936.4 bits (2419), Expect = 9.6e-269
Identity = 466/475 (98.11%), Postives = 466/475 (98.11%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPA
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 515 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 574

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 575 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 634

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Sbjct: 635 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 694

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 695 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 754

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 755 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 814

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Sbjct: 815 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

[Close]
BLAST of Cmc02g0053081 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 928.7 bits (2399), Expect = 2.0e-266
Identity = 461/475 (97.05%), Postives = 464/475 (97.68%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPA
Sbjct: 521 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 641 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 701 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Sbjct: 761 WIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEI 820

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 881 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Sbjct: 941 EGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

[Close]
BLAST of Cmc02g0053081 vs. NCBI nr
Match: TYK15984.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 924.5 bits (2388), Expect = 3.8e-265
Identity = 459/475 (96.63%), Postives = 463/475 (97.47%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MV SMM YAQLPSSFWGYAVETAVHILNNVPSKSVS+IPFELWR RKPSLSHFRIWGCPA
Sbjct: 131 MVHSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSKIPFELWRGRKPSLSHFRIWGCPA 190

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 191 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 250

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 251 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 310

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 311 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 370

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Sbjct: 371 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 430

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 431 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 490

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 491 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 550

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY  QNSKK LLPF+HG HLS+E
Sbjct: 551 EAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKDLLPFKHGFHLSEE 605

[Close]
BLAST of Cmc02g0053081 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.7e-90
Identity = 193/504 (38.29%), Postives = 298/504 (59.13%), Query Frame = 0 

Query: 2    VRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCP- 61
            VRSM+  A+LP SFWG AV+TA +++N  PS  ++ EIP  +W  ++ S SH +++GC  
Sbjct: 596  VRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRA 655

Query: 62   -AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHM----R 121
             AHV      KL+ +S  C F+GY  E  G   +DP + +V  S +  F E +       
Sbjct: 656  FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADM 715

Query: 122  NHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQ-------------------SHP 181
            + K ++ ++ +  T  ST   +     S  DE +  G+                    HP
Sbjct: 716  SEKVKNGIIPNFVTIPSTS-NNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHP 775

Query: 182  SQSLRMS---RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM 241
            +Q        RRS R   +  RY   +   V+I DD   +P S K+ ++  +K+Q +KAM
Sbjct: 776  TQGEEQHQPLRRSERPRVESRRY--PSTEYVLISDD--REPESLKEVLSHPEKNQLMKAM 835

Query: 242  DLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVD 301
              EMES+  N  ++LV+L +G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D
Sbjct: 836  QEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGID 895

Query: 302  YEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQE 361
            ++E FS V  + SIR +LS+A   D E+ Q+DVKTAFL+ +LEE I+M QPEGF   G++
Sbjct: 896  FDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKK 955

Query: 362  QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVD 421
              VCKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVD
Sbjct: 956  HMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVD 1015

Query: 422  DILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 476
            D+L++G D G +  +K  L+  F MKDL  AQ +LG++I+R+R ++ L LSQ  YI+++L
Sbjct: 1016 DMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVL 1075

[Close]
BLAST of Cmc02g0053081 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 219.5 bits (558), Expect = 7.9e-56
Identity = 157/564 (27.84%), Postives = 268/564 (47.52%), Query Frame = 0 

Query: 3    RSMMCYAQLPSSFWGYAVETAVHILNNVPSKSV---SEIPFELWRERKPSLSHFRIWGCP 62
            R+M+  A+L  SFWG AV TA +++N +PS+++   S+ P+E+W  +KP L H R++G  
Sbjct: 597  RTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGAT 656

Query: 63   AHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFD------------------------- 122
             +V + N + K + +S    FVGY  E  G   +D                         
Sbjct: 657  VYVHIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAV 716

Query: 123  ------------------PQENRVFVST----------NATFLEEDHMRNHK----PRSK 182
                              P ++R  + T          N  FL++     +K       K
Sbjct: 717  KFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRK 776

Query: 183  LVLSEATDESTR----------------VVDEVGPSSRVDETTTS-GQSHPSQSLR---- 242
            ++ +E  +ES                   ++E     R D    S G  +P++S      
Sbjct: 777  IIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETA 836

Query: 243  -------------------MSRRSGRVVSQPNRYLGLTE---TQVVIPDDGV--EDPLSY 302
                               ++RRS R+ ++P       +    +VV+    +  + P S+
Sbjct: 837  EHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSF 896

Query: 303  KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTF 362
             +     DK  W +A++ E+ +   N+ W +    E    +  +W++  K +  G    +
Sbjct: 897  DEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRY 956

Query: 363  KARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEE 422
            KARLVA+G+TQ+  +DYEETF+ VA + S R +LS+   Y+ ++ QMDVKTAFLN  L+E
Sbjct: 957  KARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKE 1016

Query: 423  SIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY- 459
             I+M  P+G         VCKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y 
Sbjct: 1017 EIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYI 1076

[Close]
BLAST of Cmc02g0053081 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.5e-51
Identity = 158/597 (26.47%), Postives = 244/597 (40.87%), Query Frame = 0 

Query: 4    SMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHV 63
            +++ +A +P ++W YA   AV+++N +P+  +  E PF+      P+    R++GC  + 
Sbjct: 638  TLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYP 697

Query: 64   LVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE---------- 123
             +   N  KL+ +SR C F+GY       L    Q +R+++S +  F E           
Sbjct: 698  WLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLAT 757

Query: 124  -DHMRNHKPRSKLVLSEATDESTR------------------------------------ 183
               ++  +  S  V S  T   TR                                    
Sbjct: 758  LSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNL 817

Query: 184  ---------------VVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQ------- 243
                              + GP      T T  Q+H SQ+   +  +    SQ       
Sbjct: 818  DSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLST 877

Query: 244  ----------PNRYLGLTETQVVIPDDGVEDPLSYKQAMND------------------- 303
                      P      + T    P   +  P    Q +N+                   
Sbjct: 878  PAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGI 937

Query: 304  -------------------------VDKDQWVKAMDLEMESMYFNSVWELVDLLEG-VKP 363
                                     +  ++W  AM  E+ +   N  W+LV      V  
Sbjct: 938  IKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTI 997

Query: 364  IGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFY 423
            +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY ETFS V    SIRI+L +A   
Sbjct: 998  VGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDR 1057

Query: 424  DYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRF 474
             + I Q+DV  AFL   L + ++MSQP GFI + +   VCKL +++YGLKQA R+W +  
Sbjct: 1058 SWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVEL 1117

[Close]
BLAST of Cmc02g0053081 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.0e-48
Identity = 153/593 (25.80%), Postives = 255/593 (43.00%), Query Frame = 0 

Query: 4    SMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHV 63
            +++ +A +P ++W YA   AV+++N +P+  +  + PF+    + P+    +++GC  + 
Sbjct: 617  TLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYP 676

Query: 64   LVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE---------- 123
             +   N  KLE +S+ C F+GY       L       R++ S +  F E           
Sbjct: 677  WLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFG 736

Query: 124  ------------DHMRNHK--PRSKLVL------------------SEATDESTRVVDEV 183
                         +  +H   P + LVL                  S +   +T+V    
Sbjct: 737  VSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSN 796

Query: 184  GPSSRVDETTTSGQSHPSQS----------LRMSRRSGRVVSQPN--------------- 243
             PSS +   ++S  + PS +           + S  +  +++ PN               
Sbjct: 797  LPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPL 856

Query: 244  -------RYLGLTETQVVIPD--------------------------------------- 303
                    ++    T +  P+                                       
Sbjct: 857  PQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRA 916

Query: 304  -DGVEDP---LSY----------KQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLLE 363
             DG+  P    SY          + A+  +  D+W +AM  E+ +   N  W+LV     
Sbjct: 917  KDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPP 976

Query: 364  GVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSI 423
             V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY ETFS V    SIRI+L +
Sbjct: 977  SVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGV 1036

Query: 424  ATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSW 466
            A    + I Q+DV  AFL   L + ++MSQP GF+ + +   VC+L ++IYGLKQA R+W
Sbjct: 1037 AVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAW 1096

[Close]
BLAST of Cmc02g0053081 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 6.1e-16
Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = 0 

Query: 303 MDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 362
           MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 363 YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEA 422
            GF ++  E  +Y +       ++ +YVDD+L+          VK  L   + MKDL + 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 423 QYVLGIQIIRDRKNKTLALSQATYIDK 450
              LG+  I    N  + LS   YI K
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAK 146

[Close]
BLAST of Cmc02g0053081 vs. ExPASy TrEMBL
Match: A0A5A7USZ2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006070 PE=4 SV=1)

HSP 1 Score: 961.1 bits (2483), Expect = 1.8e-276
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA
Sbjct: 361 MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 420

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 421 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 480

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE
Sbjct: 481 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 540

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK
Sbjct: 541 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 600

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
Sbjct: 601 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 660

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 661 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 720

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE
Sbjct: 721 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 780

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
Sbjct: 781 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 835

[Close]
BLAST of Cmc02g0053081 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 4.6e-269
Identity = 466/475 (98.11%), Postives = 466/475 (98.11%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPA
Sbjct: 521 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 641 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 701 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Sbjct: 761 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 820

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 881 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Sbjct: 941 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

[Close]
BLAST of Cmc02g0053081 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 4.6e-269
Identity = 466/475 (98.11%), Postives = 466/475 (98.11%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPA
Sbjct: 395 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 454

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 455 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 514

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 515 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 574

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 575 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 634

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Sbjct: 635 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 694

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 695 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 754

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 755 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 814

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Sbjct: 815 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

[Close]
BLAST of Cmc02g0053081 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 9.7e-267
Identity = 461/475 (97.05%), Postives = 464/475 (97.68%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPA
Sbjct: 521 MVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPA 580

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 581 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRS 640

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 641 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 700

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 701 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 760

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Sbjct: 761 WIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEI 820

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 821 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 880

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 881 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 940

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Sbjct: 941 EGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

[Close]
BLAST of Cmc02g0053081 vs. ExPASy TrEMBL
Match: A0A5D3CYF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001110 PE=4 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 1.8e-265
Identity = 459/475 (96.63%), Postives = 463/475 (97.47%), Query Frame = 0 

Query: 1   MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPA 60
           MV SMM YAQLPSSFWGYAVETAVHILNNVPSKSVS+IPFELWR RKPSLSHFRIWGCPA
Sbjct: 131 MVHSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSKIPFELWRGRKPSLSHFRIWGCPA 190

Query: 61  HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 120
           HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS
Sbjct: 191 HVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRS 250

Query: 121 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTE 180
           KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTE
Sbjct: 251 KLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTE 310

Query: 181 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCK 240
           TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCK
Sbjct: 311 TQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCK 370

Query: 241 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI 300
           WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Sbjct: 371 WIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEI 430

Query: 301 WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 360
           WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Sbjct: 431 WQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI 490

Query: 361 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLE 420
           KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDL 
Sbjct: 491 KSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLG 550

Query: 421 EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE 476
           EAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY  QNSKK LLPF+HG HLS+E
Sbjct: 551 EAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKDLLPFKHGFHLSEE 605

[Close]
BLAST of Cmc02g0053081 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 195.7 bits (496), Expect = 8.6e-50
Identity = 106/287 (36.93%), Postives = 165/287 (57.49%), Query Frame = 0 

Query: 191 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSA 250
           ++P +Y +A   +    W  AMD E+ +M     WE+  L    KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 251 GKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 310
           G ++ +KARLVAKGYTQ+EG+D+ ETFS V  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 311 NDNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 370
           N +L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 371 QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVL 430
           Q+  +   + KI       +++YVDDI++  N+   + ++K+ L + F+++DL   +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 431 GIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLS 474
           G++I R      + + Q  Y   LL        K   +P    V  S
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS 365

[Close]
BLAST of Cmc02g0053081 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-13
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0 

Query: 161 MSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 220
           M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++ 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60

Query: 221 FNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHV 280
            N  W LV        +GCKW++K K  S G +   KARLVAKG+ Q EG+ + ET+S V
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 281 AMLKSIRILLSIA 294
               +IR +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]
BLAST of Cmc02g0053081 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09
Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 2  VRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPA 61
          VRSM+C   LP +F   A  TAVHI+N  PS +++  +P E+W +  P+ S+ R +GC A
Sbjct: 9  VRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRFGCVA 68

Query: 62 HVLVTNPKKLEPRSR 76
          ++   +  KL+PR++
Sbjct: 69 YI-HCDEGKLKPRAK 82

[Close]
BLAST of Cmc02g0053081 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 1.1e-04
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 385 FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQA 444
           +L+LYVDDILL G+    L  +   L++ F MKDL    Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 445 TYIDKLL 452
            Y +++L
Sbjct: 62  KYAEQIL 66

The following BLAST results are available for this feature:
BLAST of Cmc02g0053081 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058278.13.6e-276100.00gag/pol protein [Cucumis melo var. makuwa][more]
KAA0025945.19.6e-26998.11gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0059226.19.6e-26998.11gag/pol protein [Cucumis melo var. makuwa][more]
KAA0035907.12.0e-26697.05gag/pol protein [Cucumis melo var. makuwa][more]
TYK15984.13.8e-26596.63gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc02g0053081 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109781.7e-9038.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041467.9e-5627.84Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW24.5e-5126.47Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT946.0e-4825.80Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P256006.1e-1634.01Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of Cmc02g0053081 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7USZ21.8e-276100.00Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G0060... [more]
A0A5A7TZD04.6e-26998.11Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7UYE84.6e-26998.11Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
A0A5A7T2V99.7e-26797.05Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
A0A5D3CYF41.8e-26596.63Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00111... [more]
BLAST of Cmc02g0053081 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.18.6e-5036.93cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.12.9e-1334.59Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00710.11.5e-0940.00Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
ATMG00810.11.1e-0443.28DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 222..459
e-value: 1.3E-69
score: 234.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..166
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 191..460
coord: 2..168
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 222..435

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0053081.1Cmc02g0053081.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding