Cmc02g0050111 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGTGTATGGTTCTAAGGATCTGATCCTTACTAGAAACACTGACTCTGATTTTCAATCTAATAAAAATGCTAGAAAGTCTACGTCGGGATCAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGTATAAAACAATCCTGTATTGCTGACTCCATTATGGAAGCTGAATATGTAGCAGCCTGTGAAGCAGCAAAGGAAAAAGTATGGCTTAAAAAGTTCTTAATAGATTTGGAAATTATTCAAAATATGCATCTGCCAATCACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAATTAGAAATCATAAATGAGGAAAGCACATTGAACAAAAGTACCATCTTATCCGAGAAATCGTACATCGAGGAGATGTTACAGTAA ATGTTTGTGTATGGTTCTAAGGATCTGATCCTTACTAGAAACACTGACTCTGATTTTCAATCTAATAAAAATGCTAGAAAGTCTACGTCGGGATCAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGTATAAAACAATCCTGTATTGCTGACTCCATTATGGAAGCTGAATATGTAGCAGCCTGTGAAGCAGCAAAGGAAAAAGTATGGCTTAAAAAGTTCTTAATAGATTTGGAAATTATTCAAAATATGCATCTGCCAATCACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAATTAGAAATCATAAATGAGGAAAGCACATTGAACAAAAGTACCATCTTATCCGAGAAATCGTACATCGAGGAGATGTTACAGTAA ATGTTTGTGTATGGTTCTAAGGATCTGATCCTTACTAGAAACACTGACTCTGATTTTCAATCTAATAAAAATGCTAGAAAGTCTACGTCGGGATCAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGTATAAAACAATCCTGTATTGCTGACTCCATTATGGAAGCTGAATATGTAGCAGCCTGTGAAGCAGCAAAGGAAAAAGTATGGCTTAAAAAGTTCTTAATAGATTTGGAAATTATTCAAAATATGCATCTGCCAATCACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAATTAGAAATCATAAATGAGGAAAGCACATTGAACAAAAGTACCATCTTATCCGAGAAATCGTACATCGAGGAGATGTTACAGTAA MFVYGSKDLILTRNTDSDFQSNKNARKSTSGSVFTLNGGAVVWRSIKQSCIADSIMEAEYVAACEAAKEKVWLKKFLIDLEIIQNMHLPITLYCDNSGAVANSRELEIINEESTLNKSTILSEKSYIEEMLQ Homology
BLAST of Cmc02g0050111 vs. NCBI nr
Match: KAA0047751.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK02385.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 202.6 bits (514), Expect = 2.1e-48 Identity = 107/131 (81.68%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Cmc02g0050111 vs. NCBI nr
Match: KAA0067886.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.6 bits (475), Expect = 7.0e-44 Identity = 100/132 (75.76%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Cmc02g0050111 vs. NCBI nr
Match: TYK04328.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.6 bits (475), Expect = 7.0e-44 Identity = 100/132 (75.76%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Cmc02g0050111 vs. NCBI nr
Match: KAA0047414.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK14089.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 185.7 bits (470), Expect = 2.7e-43 Identity = 93/105 (88.57%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of Cmc02g0050111 vs. NCBI nr
Match: KAA0054391.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43 Identity = 97/132 (73.48%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.4e-16 Identity = 43/101 (42.57%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08 Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07 Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy TrEMBL
Match: A0A5D3BT79 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00890 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.0e-48 Identity = 107/131 (81.68%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy TrEMBL
Match: A0A5D3BZ86 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00650 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.4e-44 Identity = 100/132 (75.76%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy TrEMBL
Match: A0A5A7VMU7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00400 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.4e-44 Identity = 100/132 (75.76%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy TrEMBL
Match: A0A5D3CV18 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00790 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43 Identity = 93/105 (88.57%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of Cmc02g0050111 vs. ExPASy TrEMBL
Match: A0A5A7ULH5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001340 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43 Identity = 97/132 (73.48%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of Cmc02g0050111 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 62.0 bits (149), Expect = 4.1e-10 Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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