Cmc02g0049681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0049681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr02: 15367171 .. 15369277 (-)
RNA-Seq Expression	Cmc02g0049681
Synteny	Cmc02g0049681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCATCCTCATGAACACACTAAACTTGAACCCCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCTAATAGACTTCGTATATCTTGCCATGTCATTTTTTGGGAGCACACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCCATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTAAGTCCACTCCTGATAGTGAGCTTAATCACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCCATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGCTTGATCAATCTGTACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACACCCCTCCTCGTCGTTCTACTCGGGTAAGGAAATCTCCTATTCATCTCCAAGATTATCGCTGTTTTTCTACTATTGTTTCCCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAGGACGCACGCTTGGGACTATGTTAATTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCAAAGAATATGGTATTGACTATGAAGAAACATTTGCTCATGTGGCTCGGATGACGTCTGTACGTAGTTTACTGGTTGTTGTTGCTGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTCAAAAATGCTTTCCTCAATGGGACTCTTTTTGAAGAAGTCTATATGAAGCCACCCCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTCTATGGTCTCAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGGTATTGTTCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCATAGACCATATTCGATCTCCAACACTACCTTGGTCAACATTTTTAAATGAAAGACCTTAGGTCTCTCGGCGCTCGGACGGGTATCTATTGTCCCAAGCTAAATATGCCTCTGATCTCTTAACTCGCTCAGGAATTACTGACTCTAACACAGCTTCAACGTCGTTAAATCCCAATGTTCATTTGACTCCTTATGATGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTCGCTGGCAGTCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGTCGTACTACGTATCCTTCGCTATGTCAAGGAAACTTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGCGATTCTCTCATTTCTCGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGTTGATGCTACTGCTGAACTTCTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCTCAGCAGGGTCCCACTCTCCTTCATTGTGACAATCGTAGTGTCATCCAAATTGCCCACAATGACGTTTTCCATGAGCGTACAAAGCACATAGAAAATGATTGTCACTTCATCCGTCATCATCTCTTGAGCCACACACTTCTTTTGCAATCTGTCTCCACCACTGAGCAACCAGTCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGTTGACAGCTACTCTACCACCTTGA

mRNA sequence

ATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCATCCTCATGAACACACTAAACTTGAACCCCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCTAATAGACTTCGTATATCTTGCCATGTCATTTTTTGGGAGCACACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCCATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTAAGTCCACTCCTGATAGTGAGCTTAATCACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCCATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGCTTGATCAATCTGTACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACACCCCTCCTCGTCGTTCTACTCGGGTAAGGAAATCTCCTATTCATCTCCAAGATTATCGCTGTTTTTCTACTATTGTTTCCCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAGGACGCACGCTTGGGACTATGTTAATTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCAAAGAATATGGTATTGACTATGAAGAAACATTTGCTCATGTGGCTCGGATGACGTCTGTACGTAGTTTACTGGTTGTTGTTGCTGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTCAAAAATGCTTTCCTCAATGGGACTCTTTTTGAAGAAGTCTATATGAAGCCACCCCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTCTATGGTCTCAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGATGTCAGTCTGTATCGGCAACTCGCTGGCAGTCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGTCGTACTACGTATCCTTCGCTATGTCAAGGAAACTTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGCGATTCTCTCATTTCTCGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGTTGATGCTACTGCTGAACTTCTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCTCAGCAGGGTCCCACTCTCCTTCATTGTGACAATCGTAGTGTCATCCAAATTGCCCACAATGACGTTTTCCATGAGCGTACAAAGCACATAGAAAATGATTGTCACTTCATCCGTCATCATCTCTTGAGCCACACACTTCTTTTGCAATCTGTCTCCACCACTGAGCAACCAGTCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGTTGACAGCTACTCTACCACCTTGA

Coding sequence (CDS)

ATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCATCCTCATGAACACACTAAACTTGAACCCCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCTAATAGACTTCGTATATCTTGCCATGTCATTTTTTGGGAGCACACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCCATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTAAGTCCACTCCTGATAGTGAGCTTAATCACTATGTTCTCTCGTTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCTCCATCTTTCTTCACTGACACATCTATTGATCTTTTTCCTCTCTCTGAGTCCACTCCTGATAATGAGCTTGATCAATCTGTACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACACCCCTCCTCGTCGTTCTACTCGGGTAAGGAAATCTCCTATTCATCTCCAAGATTATCGCTGTTTTTCTACTATTGTTTCCCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAGGACGCACGCTTGGGACTATGTTAATTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGCGTTATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCAAAGAATATGGTATTGACTATGAAGAAACATTTGCTCATGTGGCTCGGATGACGTCTGTACGTAGTTTACTGGTTGTTGTTGCTGCCAAGCAGTGGCCTCTTCTTCAAATGGATGTCAAAAATGCTTTCCTCAATGGGACTCTTTTTGAAGAAGTCTATATGAAGCCACCCCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTCTATGGTCTCAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACTCGTCACACACCCCAGGATGTCAGTCTGTATCGGCAACTCGCTGGCAGTCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCACTTTACTGTCGTACTACGTATCCTTCGCTATGTCAAGGAAACTTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGCGATTCTCTCATTTCTCGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGTTGATGCTACTGCTGAACTTCTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCTCAGCAGGGTCCCACTCTCCTTCATTGTGACAATCGTAGTGTCATCCAAATTGCCCACAATGACGTTTTCCATGAGCGTACAAAGCACATAGAAAATGATTGTCACTTCATCCGTCATCATCTCTTGAGCCACACACTTCTTTTGCAATCTGTCTCCACCACTGAGCAACCAGTCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCAAGTTGACAGCTACTCTACCACCTTGA

Protein sequence

MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVYLAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQDVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQPVDIFTKALPSTRFNQIRTKLKLTATLPP

Homology

[Close]

BLAST of Cmc02g0049681 vs. NCBI nr
Match: KAA0046784.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 612/628 (97.45%), Postives = 612/628 (97.45%), Query Frame = 0


Query: 1    MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY 60
            MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY
Sbjct: 381  MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY 440

Query: 61   LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 120
            LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA
Sbjct: 441  LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 500

Query: 121  SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST 180
            SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST
Sbjct: 501  SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST 560

Query: 181  RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP 240
            RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP
Sbjct: 561  RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP 620

Query: 241  GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 300
            GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV
Sbjct: 621  GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 680

Query: 301  VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 360
            VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA
Sbjct: 681  VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 740

Query: 361  TFSSTITQLGFTSSPHDTALFTRHTPQ---------------DVSLYRQLAGSLIYLTVT 420
            TFSSTITQLGFTSSPHDTALFTRHTPQ               DVSLYRQLAGSLIYLTVT
Sbjct: 741  TFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITDVSLYRQLAGSLIYLTVT 800

Query: 421  RPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWA 480
            RPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWA
Sbjct: 801  RPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWA 860

Query: 481  GDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADM 540
            GDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADM
Sbjct: 861  GDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADM 920

Query: 541  GVPQQGPTLLHCDNRSVIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQP 600
            GVPQQGPTLLHCDNRS IQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQP
Sbjct: 921  GVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQP 980

Query: 601  VDIFTKALPSTRFNQIRTKLKLTATLPP 614
            VDIFTKALPSTRFNQIRTKLKLTATLPP
Sbjct: 981  VDIFTKALPSTRFNQIRTKLKLTATLPP 1008

[Close]

BLAST of Cmc02g0049681 vs. NCBI nr
Match: TYK29663.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 566/631 (89.70%), Postives = 576/631 (91.28%), Query Frame = 0


Query: 1   MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY 60
           MVLLLTIPTLKSLVVL+LFSCILMNTLNLN VPASAVFLAMAQNIKVFVVGI FLIDFVY
Sbjct: 205 MVLLLTIPTLKSLVVLILFSCILMNTLNLNLVPASAVFLAMAQNIKVFVVGILFLIDFVY 264

Query: 61  LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 120
           LAMS FGSTLCSLVYP STPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA
Sbjct: 265 LAMSLFGSTLCSLVYPLSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 324

Query: 121 SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST 180
           SFSSP SFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPP RST
Sbjct: 325 SFSSPSSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPHRST 384

Query: 181 RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP 240
           RVR+ PIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+ H WDYV+LPP
Sbjct: 385 RVREPPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPP 444

Query: 241 GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 300
           GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VARMTSVRSLL V
Sbjct: 445 GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAV 504

Query: 301 VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 360
            AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA
Sbjct: 505 AAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 564

Query: 361 TFSSTITQLGFTSSPHDTALFTRHTPQDVSLYRQLAGSLIYLTVTRPDIAYA-----VHI 420
           TFSSTITQLGFTSSPHDTALFTRHTPQ + L       +I   +T  + A       VH+
Sbjct: 565 TFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGITDSNTASTSLDPNVHL 624

Query: 421 VS-------------QFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDA 480
            S             QFMAAPRTIHF  VLRILRYVKETLGHGLQFSSQSSLVLSGYSDA
Sbjct: 625 TSYDGVPLEDVSLYRQFMAAPRTIHFIAVLRILRYVKETLGHGLQFSSQSSLVLSGYSDA 684

Query: 481 DWAGDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLL 540
           DWAGDPTDRRSTTGYCFYLGDSLIS RSKKQSVVSRSSTESEYRALVDATAELLWLRWLL
Sbjct: 685 DWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALVDATAELLWLRWLL 744

Query: 541 ADMGVPQQGPTLLHCDNRSVIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTT 600
           ADMGVPQQGPTLLHCDNRS IQIAHNDVFHERTKHIENDCHFIRHHLLSHTL LQSVSTT
Sbjct: 745 ADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLFLQSVSTT 804

Query: 601 EQPVDIFTKALPSTRFNQIRTKLKLTATLPP 614
           EQP DIFTKALPSTRFNQIRTKLKLTATLPP
Sbjct: 805 EQPADIFTKALPSTRFNQIRTKLKLTATLPP 835

[Close]

BLAST of Cmc02g0049681 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 914.4 bits (2362), Expect = 5.0e-262
Identity = 478/602 (79.40%), Postives = 484/602 (80.40%), Query Frame = 0


Query: 110  TMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPD 169
            TMFSRLSSFHASFSSP SFFTDTSIDLFPLSESTP NEL QS PTSATSDQSSISDGNPD
Sbjct: 733  TMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPD 792

Query: 170  PPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALER 229
            PPPD PPRRSTRVR+ PIHLQDY CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+
Sbjct: 793  PPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEK 852

Query: 230  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 289
             H WDYV+LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VA
Sbjct: 853  MHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVA 912

Query: 290  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALY 349
            RMTSVRSLL V AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALY
Sbjct: 913  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 972

Query: 350  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ---------------------- 409
            GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ                      
Sbjct: 973  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAI 1032

Query: 410  ------------------------------------------------------------ 469
                                                                        
Sbjct: 1033 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTP 1092

Query: 470  ----------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 529
                            +VSLYRQL GSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT V
Sbjct: 1093 LDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAV 1152

Query: 530  LRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSK 589
            LRILRYVK TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLIS RSK
Sbjct: 1153 LRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1212

Query: 590  KQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVF 614
            KQSVVSRSSTESEYRAL DATAELLWLRWLLADMGVPQQGPTLLHCDNRS IQIAHNDVF
Sbjct: 1213 KQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVF 1272

[Close]

BLAST of Cmc02g0049681 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 914.4 bits (2362), Expect = 5.0e-262
Identity = 478/602 (79.40%), Postives = 484/602 (80.40%), Query Frame = 0


Query: 110  TMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPD 169
            TMFSRLSSFHASFSSP SFFTDTSIDLFPLSESTP NEL QS PTSATSDQSSISDGNPD
Sbjct: 733  TMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPD 792

Query: 170  PPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALER 229
            PPPD PPRRSTRVR+ PIHLQDY CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+
Sbjct: 793  PPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEK 852

Query: 230  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 289
             H WDYV+LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VA
Sbjct: 853  MHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVA 912

Query: 290  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALY 349
            RMTSVRSLL V AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALY
Sbjct: 913  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 972

Query: 350  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ---------------------- 409
            GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ                      
Sbjct: 973  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAI 1032

Query: 410  ------------------------------------------------------------ 469
                                                                        
Sbjct: 1033 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTP 1092

Query: 470  ----------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 529
                            +VSLYRQL GSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT V
Sbjct: 1093 LDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAV 1152

Query: 530  LRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSK 589
            LRILRYVK TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLIS RSK
Sbjct: 1153 LRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1212

Query: 590  KQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVF 614
            KQSVVSRSSTESEYRAL DATAELLWLRWLLADMGVPQQGPTLLHCDNRS IQIAHNDVF
Sbjct: 1213 KQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVF 1272

[Close]

BLAST of Cmc02g0049681 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 912.9 bits (2358), Expect = 1.5e-261
Identity = 477/602 (79.24%), Postives = 484/602 (80.40%), Query Frame = 0


Query: 110  TMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPD 169
            TMFSRLSSFHASFSSP SFFTDTSIDLFPLSESTP NEL QS PTSATSDQSSISDGNPD
Sbjct: 733  TMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPD 792

Query: 170  PPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALER 229
            PPPD PPRRSTRVR+ PIHLQDY CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+
Sbjct: 793  PPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEK 852

Query: 230  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 289
             H WDYV+LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VA
Sbjct: 853  MHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVA 912

Query: 290  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALY 349
            RMTSVRSLL V AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALY
Sbjct: 913  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 972

Query: 350  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ---------------------- 409
            GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ                      
Sbjct: 973  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAI 1032

Query: 410  ------------------------------------------------------------ 469
                                                                        
Sbjct: 1033 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTP 1092

Query: 470  ----------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 529
                            +VSLYRQL GSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT V
Sbjct: 1093 LDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAV 1152

Query: 530  LRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSK 589
            LRILRYVK TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLIS RSK
Sbjct: 1153 LRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1212

Query: 590  KQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVF 614
            KQSVVSRSSTESEYRAL DATAELLWLRWLLADMGVPQQGPTLLHCDNRS IQIAHNDVF
Sbjct: 1213 KQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVF 1272

[Close]

BLAST of Cmc02g0049681 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-83
Identity = 203/579 (35.06%), Postives = 277/579 (47.84%), Query Frame = 0


Query: 151  SVPTSATSDQSSISDGNPDPPPDTPPRRSTRVR-KSPIHL---------------QDYRC 210
            S   S  +  SS S   P  PP  P     +V  ++P++                Q Y  
Sbjct: 870  STSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSY 929

Query: 211  FSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPPGKRPI-GCKWIYKI 270
             +++ +  EP +  +A  D  W++AM  E+ A    H WD V  PP    I GC+WI+  
Sbjct: 930  ATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 989

Query: 271  KTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVVVAAKQWPLLQMDV 330
            K +SDG++ RYKARLVAKGY++  G+DY ETF+ V + TS+R +L V   + WP+ Q+DV
Sbjct: 990  KFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1049

Query: 331  KNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGF 390
             NAFL GTL +EVYM  PPG      P  VC LR+A+YGLKQAPRAW+    + +  +GF
Sbjct: 1050 NNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGF 1109

Query: 391  TSSPHDTALFT---------------------------RHT------------------- 450
             +S  DT+LF                            +HT                   
Sbjct: 1110 VNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYF 1169

Query: 451  --------PQDVSL--------------------------------------------YR 510
                    PQ + L                                            YR
Sbjct: 1170 LGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYR 1229

Query: 511  QLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSS 570
             + GSL YL  TRPD++YAV+ +SQ+M  P   H+  + R+LRY+  T  HG+     ++
Sbjct: 1230 GIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT 1289

Query: 571  LVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATA 613
            L L  YSDADWAGD  D  ST GY  YLG   IS  SKKQ  V RSSTE+EYR++ + ++
Sbjct: 1290 LSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSS 1349

[Close]

BLAST of Cmc02g0049681 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.3e-83
Identity = 216/614 (35.18%), Postives = 287/614 (46.74%), Query Frame = 0


Query: 119  HASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNP------DPPP 178
            H+S ++  +  T+ S      S STP  +   S P+  TS  SS +   P       PPP
Sbjct: 853  HSSQNTSQNNPTNESPSQLAQSLSTP-AQSSSSSPSPTTSASSSSTSPTPPSILIHPPPP 912

Query: 179  DTPPRRSTRVRKSPIHLQDYRC----------FSTIVSLI---EPTSYQEASTDPLWQKA 238
                  +        H    R           +S  VSL    EP +  +A  D  W+ A
Sbjct: 913  LAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNA 972

Query: 239  MNDELQALERTHAWDYVNLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSKEYG 298
            M  E+ A    H WD V  PP    I GC+WI+  K +SDG++ RYKARLVAKGY++  G
Sbjct: 973  MGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPG 1032

Query: 299  IDYEETFAHVARMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPG--TSS 358
            +DY ETF+ V + TS+R +L V   + WP+ Q+DV NAFL GTL ++VYM  PPG     
Sbjct: 1033 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKD 1092

Query: 359  PPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRH------------ 418
             P+ VC LR+ALYGLKQAPRAW+    + +  +GF +S  DT+LF               
Sbjct: 1093 RPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYV 1152

Query: 419  ------------------------------------------------------------ 478
                                                                        
Sbjct: 1153 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLA 1212

Query: 479  -----------TPQ---------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQ 538
                       TP                D + YR + GSL YL  TRPDI+YAV+ +SQ
Sbjct: 1213 RTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQ 1272

Query: 539  FMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYC 598
            FM  P   H   + RILRY+  T  HG+     ++L L  YSDADWAGD  D  ST GY 
Sbjct: 1273 FMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYI 1332

Query: 599  FYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCD 613
             YLG   IS  SKKQ  V RSSTE+EYR++ + ++E+ W+  LL ++G+    P +++CD
Sbjct: 1333 VYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCD 1392

[Close]

BLAST of Cmc02g0049681 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 262.7 bits (670), Expect = 1.0e-68
Identity = 172/547 (31.44%), Postives = 262/547 (47.90%), Query Frame = 0


Query: 177  RRSTRVRKSP-------------IHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDE 236
            RRS R++  P             + L  +  F+ + +  +   Y++  +   W++A+N E
Sbjct: 856  RRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSS--WEEAINTE 915

Query: 237  LQALERTHAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEE 296
            L A +  + W     P  K  +  +W++ +K +  G   RYKARLVA+G++++Y IDYEE
Sbjct: 916  LNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEE 975

Query: 297  TFAHVARMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCL 356
            TFA VAR++S R +L +V      + QMDVK AFLNGTL EE+YM+ P G S     VC 
Sbjct: 976  TFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCK 1035

Query: 357  LRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALF---------------------- 416
            L +A+YGLKQA R WF  F   + +  F +S  D  ++                      
Sbjct: 1036 LNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVI 1095

Query: 417  --------------------------------TRHTPQDVSLY----------------- 476
                                             R   Q+  +Y                 
Sbjct: 1096 ATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNME 1155

Query: 477  ----------------------------RQLAGSLIYLTV-TRPDIAYAVHIVSQFMAAP 536
                                        R L G L+Y+ + TRPD+  AV+I+S++ +  
Sbjct: 1156 NCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKN 1215

Query: 537  RTIHFTVVLRILRYVKETLGHGLQFSSQSSL--VLSGYSDADWAGDPTDRRSTTGYCFYL 596
             +  +  + R+LRY+K T+   L F    +    + GY D+DWAG   DR+STTGY F +
Sbjct: 1216 NSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKM 1275

Query: 597  GD-SLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNR 608
             D +LI   +K+Q+ V+ SSTE+EY AL +A  E LWL++LL  + +  + P  ++ DN+
Sbjct: 1276 FDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQ 1335

[Close]

BLAST of Cmc02g0049681 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-66
Identity = 190/599 (31.72%), Postives = 281/599 (46.91%), Query Frame = 0


Query: 126  PSFFTDTSIDLFPLS-ESTPDNELDQ-SVPTSATSDQSSISDGNPDPPPDT-------PP 185
            P+F T  S    P S EST D   +Q   P         + +G  +    T       P 
Sbjct: 725  PNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 784

Query: 186  RRSTRVRKSPIHLQDYRCFSTIVSLI----EPTSYQEASTDP---LWQKAMNDELQALER 245
            RRS R R     ++  R  ST   LI    EP S +E  + P      KAM +E+++L++
Sbjct: 785  RRSERPR-----VESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQK 844

Query: 246  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 305
               +  V LP GKRP+ CKW++K+K   D  + RYKARLV KG+ ++ GID++E F+ V 
Sbjct: 845  NGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVV 904

Query: 306  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRA 365
            +MTS+R++L + A+    + Q+DVK AFL+G L EE+YM+ P G   +   H VC L ++
Sbjct: 905  KMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKS 964

Query: 366  LYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRH----------------------- 425
            LYGLKQAPR W+  F S +    +  +  D  ++ +                        
Sbjct: 965  LYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDK 1024

Query: 426  ------------------------------------------------------------ 485
                                                                        
Sbjct: 1025 GLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAK 1084

Query: 486  ---TPQDVSL---------------------YRQLAGSLIYLTV-TRPDIAYAVHIVSQF 545
               TP    L                     Y    GSL+Y  V TRPDIA+AV +VS+F
Sbjct: 1085 PVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRF 1144

Query: 546  MAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 599
            +  P   H+  V  ILRY++ T G  L F   S  +L GY+DAD AGD  +R+S+TGY F
Sbjct: 1145 LENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLF 1204

[Close]

BLAST of Cmc02g0049681 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.6e-29
Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 388 DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQ 447
           D S +R + G+L YLT+TRPDI+YAV+IV Q M  P    F ++ R+LRYVK T+ HGL 
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 448 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRA 507
               S L +  + D+DWAG  + RRSTTG+C +LG ++IS  +K+Q  VSRSSTE+EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 508 LVDATAELLW 518
           L    AEL W
Sbjct: 216 LALTAAELTW 225

[Close]

BLAST of Cmc02g0049681 vs. ExPASy TrEMBL
Match: A0A5A7TUN2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00740 PE=4 SV=1)

HSP 1 Score: 1181.8 bits (3056), Expect = 0.0e+00
Identity = 612/628 (97.45%), Postives = 612/628 (97.45%), Query Frame = 0


Query: 1    MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY 60
            MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY
Sbjct: 381  MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY 440

Query: 61   LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 120
            LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA
Sbjct: 441  LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 500

Query: 121  SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST 180
            SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST
Sbjct: 501  SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST 560

Query: 181  RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP 240
            RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP
Sbjct: 561  RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP 620

Query: 241  GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 300
            GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV
Sbjct: 621  GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 680

Query: 301  VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 360
            VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA
Sbjct: 681  VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 740

Query: 361  TFSSTITQLGFTSSPHDTALFTRHTPQ---------------DVSLYRQLAGSLIYLTVT 420
            TFSSTITQLGFTSSPHDTALFTRHTPQ               DVSLYRQLAGSLIYLTVT
Sbjct: 741  TFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITDVSLYRQLAGSLIYLTVT 800

Query: 421  RPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWA 480
            RPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWA
Sbjct: 801  RPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDADWA 860

Query: 481  GDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADM 540
            GDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADM
Sbjct: 861  GDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLLADM 920

Query: 541  GVPQQGPTLLHCDNRSVIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQP 600
            GVPQQGPTLLHCDNRS IQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQP
Sbjct: 921  GVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTTEQP 980

Query: 601  VDIFTKALPSTRFNQIRTKLKLTATLPP 614
            VDIFTKALPSTRFNQIRTKLKLTATLPP
Sbjct: 981  VDIFTKALPSTRFNQIRTKLKLTATLPP 1008

[Close]

BLAST of Cmc02g0049681 vs. ExPASy TrEMBL
Match: A0A5D3E0Q6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00050 PE=4 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 566/631 (89.70%), Postives = 576/631 (91.28%), Query Frame = 0


Query: 1   MVLLLTIPTLKSLVVLVLFSCILMNTLNLNPVPASAVFLAMAQNIKVFVVGIPFLIDFVY 60
           MVLLLTIPTLKSLVVL+LFSCILMNTLNLN VPASAVFLAMAQNIKVFVVGI FLIDFVY
Sbjct: 205 MVLLLTIPTLKSLVVLILFSCILMNTLNLNLVPASAVFLAMAQNIKVFVVGILFLIDFVY 264

Query: 61  LAMSFFGSTLCSLVYPPSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 120
           LAMS FGSTLCSLVYP STPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA
Sbjct: 265 LAMSLFGSTLCSLVYPLSTPPSLVLHLSSLTHLLIFFLSLSPLLIVSLITMFSRLSSFHA 324

Query: 121 SFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPRRST 180
           SFSSP SFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPP RST
Sbjct: 325 SFSSPSSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPDPPPDTPPHRST 384

Query: 181 RVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPP 240
           RVR+ PIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+ H WDYV+LPP
Sbjct: 385 RVREPPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPP 444

Query: 241 GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 300
           GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VARMTSVRSLL V
Sbjct: 445 GKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAV 504

Query: 301 VAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 360
            AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA
Sbjct: 505 AAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFA 564

Query: 361 TFSSTITQLGFTSSPHDTALFTRHTPQDVSLYRQLAGSLIYLTVTRPDIAYA-----VHI 420
           TFSSTITQLGFTSSPHDTALFTRHTPQ + L       +I   +T  + A       VH+
Sbjct: 565 TFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGITDSNTASTSLDPNVHL 624

Query: 421 VS-------------QFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGYSDA 480
            S             QFMAAPRTIHF  VLRILRYVKETLGHGLQFSSQSSLVLSGYSDA
Sbjct: 625 TSYDGVPLEDVSLYRQFMAAPRTIHFIAVLRILRYVKETLGHGLQFSSQSSLVLSGYSDA 684

Query: 481 DWAGDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRALVDATAELLWLRWLL 540
           DWAGDPTDRRSTTGYCFYLGDSLIS RSKKQSVVSRSSTESEYRALVDATAELLWLRWLL
Sbjct: 685 DWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALVDATAELLWLRWLL 744

Query: 541 ADMGVPQQGPTLLHCDNRSVIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSVSTT 600
           ADMGVPQQGPTLLHCDNRS IQIAHNDVFHERTKHIENDCHFIRHHLLSHTL LQSVSTT
Sbjct: 745 ADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLFLQSVSTT 804

Query: 601 EQPVDIFTKALPSTRFNQIRTKLKLTATLPP 614
           EQP DIFTKALPSTRFNQIRTKLKLTATLPP
Sbjct: 805 EQPADIFTKALPSTRFNQIRTKLKLTATLPP 835

[Close]

BLAST of Cmc02g0049681 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 914.4 bits (2362), Expect = 2.4e-262
Identity = 478/602 (79.40%), Postives = 484/602 (80.40%), Query Frame = 0


Query: 110  TMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPD 169
            TMFSRLSSFHASFSSP SFFTDTSIDLFPLSESTP NEL QS PTSATSDQSSISDGNPD
Sbjct: 733  TMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPD 792

Query: 170  PPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALER 229
            PPPD PPRRSTRVR+ PIHLQDY CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+
Sbjct: 793  PPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEK 852

Query: 230  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 289
             H WDYV+LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VA
Sbjct: 853  MHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVA 912

Query: 290  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALY 349
            RMTSVRSLL V AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALY
Sbjct: 913  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 972

Query: 350  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ---------------------- 409
            GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ                      
Sbjct: 973  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAI 1032

Query: 410  ------------------------------------------------------------ 469
                                                                        
Sbjct: 1033 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTP 1092

Query: 470  ----------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 529
                            +VSLYRQL GSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT V
Sbjct: 1093 LDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAV 1152

Query: 530  LRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSK 589
            LRILRYVK TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLIS RSK
Sbjct: 1153 LRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1212

Query: 590  KQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVF 614
            KQSVVSRSSTESEYRAL DATAELLWLRWLLADMGVPQQGPTLLHCDNRS IQIAHNDVF
Sbjct: 1213 KQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVF 1272

[Close]

BLAST of Cmc02g0049681 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 914.4 bits (2362), Expect = 2.4e-262
Identity = 478/602 (79.40%), Postives = 484/602 (80.40%), Query Frame = 0


Query: 110  TMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPD 169
            TMFSRLSSFHASFSSP SFFTDTSIDLFPLSESTP NEL QS PTSATSDQSSISDGNPD
Sbjct: 733  TMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPD 792

Query: 170  PPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALER 229
            PPPD PPRRSTRVR+ PIHLQDY CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+
Sbjct: 793  PPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEK 852

Query: 230  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 289
             H WDYV+LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VA
Sbjct: 853  MHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVA 912

Query: 290  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALY 349
            RMTSVRSLL V AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALY
Sbjct: 913  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 972

Query: 350  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ---------------------- 409
            GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ                      
Sbjct: 973  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAI 1032

Query: 410  ------------------------------------------------------------ 469
                                                                        
Sbjct: 1033 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTP 1092

Query: 470  ----------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 529
                            +VSLYRQL GSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT V
Sbjct: 1093 LDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAV 1152

Query: 530  LRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSK 589
            LRILRYVK TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLIS RSK
Sbjct: 1153 LRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1212

Query: 590  KQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVF 614
            KQSVVSRSSTESEYRAL DATAELLWLRWLLADMGVPQQGPTLLHCDNRS IQIAHNDVF
Sbjct: 1213 KQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVF 1272

[Close]

BLAST of Cmc02g0049681 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 912.9 bits (2358), Expect = 7.1e-262
Identity = 477/602 (79.24%), Postives = 484/602 (80.40%), Query Frame = 0


Query: 110  TMFSRLSSFHASFSSPPSFFTDTSIDLFPLSESTPDNELDQSVPTSATSDQSSISDGNPD 169
            TMFSRLSSFHASFSSP SFFTDTSIDLFPLSESTP NEL QS PTSATSDQSSISDGNPD
Sbjct: 733  TMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPD 792

Query: 170  PPPDTPPRRSTRVRKSPIHLQDYRCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALER 229
            PPPD PPRRSTRVR+ PIHLQDY CFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALE+
Sbjct: 793  PPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEK 852

Query: 230  THAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVA 289
             H WDYV+LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYS+EYGIDYEETFA VA
Sbjct: 853  MHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVA 912

Query: 290  RMTSVRSLLVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALY 349
            RMTSVRSLL V AAKQWPLLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALY
Sbjct: 913  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 972

Query: 350  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ---------------------- 409
            GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQ                      
Sbjct: 973  GLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAI 1032

Query: 410  ------------------------------------------------------------ 469
                                                                        
Sbjct: 1033 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTP 1092

Query: 470  ----------------DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 529
                            +VSLYRQL GSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT V
Sbjct: 1093 LDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAV 1152

Query: 530  LRILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSK 589
            LRILRYVK TLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLIS RSK
Sbjct: 1153 LRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1212

Query: 590  KQSVVSRSSTESEYRALVDATAELLWLRWLLADMGVPQQGPTLLHCDNRSVIQIAHNDVF 614
            KQSVVSRSSTESEYRAL DATAELLWLRWLLADMGVPQQGPTLLHCDNRS IQIAHNDVF
Sbjct: 1213 KQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVF 1272

[Close]

BLAST of Cmc02g0049681 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 354.0 bits (907), Expect = 2.4e-97
Identity = 222/580 (38.28%), Postives = 295/580 (50.86%), Query Frame = 0


Query: 149 DQSVPTSATS----DQSSISDGNPDPPPDTPPRRSTRVRKSPIHLQDYRCFST------- 208
           D    TS++S      ++I +  P+P   T  RR+    + P +LQDY C S        
Sbjct: 4   DADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRT----RKPAYLQDYYCHSVASLTIHD 63

Query: 209 --------------------IVSLIEPTSYQEASTDPLWQKAMNDELQALERTHAWDYVN 268
                               I    EP++Y EA    +W  AM+DE+ A+E TH W+   
Sbjct: 64  ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICT 123

Query: 269 LPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSL 328
           LPP K+PIGCKW+YKIK +SDGTIERYKARLVAKGY+++ GID+ ETF+ V ++TSV+ +
Sbjct: 124 LPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLI 183

Query: 329 LVVVAAKQWPLLQMDVKNAFLNGTLFEEVYMKPPP------GTSSPPHKVCLLRRALYGL 388
           L + A   + L Q+D+ NAFLNG L EE+YMK PP      G S PP+ VC L++++YGL
Sbjct: 184 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 243

Query: 389 KQAPRAWFATFSSTITQLGFTSSPHDTALFTRHT-------------------------- 448
           KQA R WF  FS T+   GF  S  D   F + T                          
Sbjct: 244 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 303

Query: 449 ---------------------------------------------------------PQD 508
                                                                    P D
Sbjct: 304 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 363

Query: 509 VSL---------------YRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLR 568
            S+               YR+L G L+YL +TR DI++AV+ +SQF  APR  H   V++
Sbjct: 364 PSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMK 423

Query: 569 ILRYVKETLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSKKQ 594
           IL Y+K T+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLIS +SKKQ
Sbjct: 424 ILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQ 483

[Close]

BLAST of Cmc02g0049681 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-30
Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 388 DVSLYRQLAGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQ 447
           D S +R + G+L YLT+TRPDI+YAV+IV Q M  P    F ++ R+LRYVK T+ HGL 
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 448 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISRRSKKQSVVSRSSTESEYRA 507
               S L +  + D+DWAG  + RRSTTG+C +LG ++IS  +K+Q  VSRSSTE+EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 508 LVDATAELLW 518
           L    AEL W
Sbjct: 216 LALTAAELTW 225

[Close]

BLAST of Cmc02g0049681 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 98.6 bits (244), Expect = 1.9e-20
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 203 EPTSYQEASTDPLWQKAMNDELQALERTHAWDYVNLPPGKRPIGCKWIYKIKTHSDGTIE 262
           EP S   A  DP W +AM +EL AL R   W  V  P  +  +GCKW++K K HSDGT++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 263 RYKARLVAKGYSKEYGIDYEETFAHVARMTSVRSLLVV 301
           R KARLVAKG+ +E GI + ET++ V R  ++R++L V
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124

[Close]

BLAST of Cmc02g0049681 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-16
Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 400 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYVKETLGHGLQFSSQSSLVLSGY 459
           +YLT+TRPD+ +AV+ +SQF +A RT     V ++L YVK T+G GL +S+ S L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 460 SDADWAGDPTDRRSTTGYC 479
           +D+DWA  P  RRS TG+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc02g0049681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046784.1	0.0e+00	97.45	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK29663.1	0.0e+00	89.70	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0037745.1	5.0e-262	79.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	5.0e-262	79.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	1.5e-261	79.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc02g0049681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	2.0e-83	35.06	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.3e-83	35.18	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.0e-68	31.44	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	2.2e-66	31.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	3.6e-29	52.31	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc02g0049681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUN2	0.0e+00	97.45	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3E0Q6	0.0e+00	89.70	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VIT8	2.4e-262	79.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	2.4e-262	79.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	7.1e-262	79.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc02g0049681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.4e-97	38.28	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.6e-30	52.31	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.9e-20	47.96	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	2.1e-16	49.37	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 232..385 e-value: 8.3E-46 score: 156.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..167
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 186..383
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 458..595 e-value: 1.51013E-72 score: 227.351
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 231..563

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0049681.1	Cmc02g0049681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding