Cmc02g0049061 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0049061
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr02: 14676373 .. 14677968 (+)
RNA-Seq ExpressionCmc02g0049061
SyntenyCmc02g0049061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTCGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTAAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACGGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTTCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACACAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAGCAAATGTAG

mRNA sequence

ATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTCGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTAAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACGGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTTCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACACAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAGCAAATGTAG

Coding sequence (CDS)

ATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTATCAGCCAACCATGCAAATATAGACTGTTATGGCAAGGAAGTCGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTAAAGAAGAAGGATGGGTCAATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATCCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATCTGATGAACAGGGTGTTTAAGGAGTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAAGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACCCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACGGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTTCTGATGCAGCAGGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGATCATAAGAGCCTGAAGTACTTCTTCACACAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGTAAGCAAATGTAG

Protein sequence

MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKQM
Homology
[Close]
BLAST of Cmc02g0049061 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.2e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 418 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 477

Query: 61  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 478 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 537

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 538 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 597

Query: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 598 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 657

Query: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 658 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 717

Query: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 718 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 777

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 778 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 837

Query: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
           GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 838 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 897

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 898 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 946

[Close]
BLAST of Cmc02g0049061 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.2e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 1082 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 1141

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 1142 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 1201

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 1202 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1261

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 1262 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1321

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1322 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1381

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1382 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1441

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 1442 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1501

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 1502 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1561

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 1562 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1610

[Close]
BLAST of Cmc02g0049061 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.2e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 837  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 896

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 897  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 956

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 957  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1005

[Close]
BLAST of Cmc02g0049061 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.2e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 828  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 887

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 888  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 947

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 948  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1007

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 1008 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1067

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1068 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1127

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1128 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1187

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 1188 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1247

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 1248 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1307

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 1308 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1356

[Close]
BLAST of Cmc02g0049061 vs. NCBI nr
Match: TYK28368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.2e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 816  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 875

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 876  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 935

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 936  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 995

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 996  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1055

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1056 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1115

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1116 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1175

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 1176 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1235

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 1236 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1295

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 1296 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1344

[Close]
BLAST of Cmc02g0049061 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.1e-85
Identity = 157/402 (39.05%), Postives = 249/402 (61.94%), Query Frame = 0 

Query: 135 YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELN 194
           Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 195 KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFV 254
           ++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    + KTAF +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 255 VMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN 314
            M FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH + L  V E L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 315 KLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYY 374
            L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +  P+   EI++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 375 RRFVEDFSRIASPLTQLTRKGTPF-VWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIY 434
           R+F+ +F+ IA P+T+  +K       +P  + +F++LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 435 SDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 494
           +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 495 IYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKQ 531
           I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK+
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKE 614

[Close]
BLAST of Cmc02g0049061 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.5e-82
Identity = 153/409 (37.41%), Postives = 241/409 (58.92%), Query Frame = 0 

Query: 128 APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLC 187
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 188 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSR 247
           IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 248 YGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 307
            GHYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 308 LETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSF 367
              L    L  +  KCEF  ++  FLGH+V+ +G+  +P K++A+ ++  P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 368 LGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACERSFQELKQKLVTAPVLTVPDG 427
           LGL GYYR+F+ +++ IA P+T   +K T           +F++LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 428 SGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHY 487
              FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

Query: 488 LYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKQ 531
           L G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK+
Sbjct: 565 LLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKE 613

[Close]
BLAST of Cmc02g0049061 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.9e-81
Identity = 178/552 (32.25%), Postives = 294/552 (53.26%), Query Frame = 0 

Query: 3   DVTLLVL-DMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVI 62
           D+T  VL ++  FD I+G D L    A +D     ++  P  +     R +  + +  ++
Sbjct: 19  DITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITPGIKIPLLARAS--INVNPLL 78

Query: 63  SAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAI 122
           +A         GT  IL S++                E+P +F   L G+     V+ A+
Sbjct: 79  AAEH-----PDGTQEILNSLLG---------------EFPRIFEPPLSGM----SVETAV 138

Query: 123 ELEPGT---APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK--- 182
           + E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK   
Sbjct: 139 KAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKP 198

Query: 183 --DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGD 242
             +   R+ +D++ LN VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +++ D
Sbjct: 199 NGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESD 258

Query: 243 IPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEA 302
           IPKTAF +  G YEF+ + FGL NAPA+F  +++ + +E +     V+IDDI+++S+   
Sbjct: 259 IPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYD 318

Query: 303 EHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRP 362
            H ++L  VL +L    L     K  F   +V FLG++V+++G+  DP K+ A++    P
Sbjct: 319 THWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPP 378

Query: 363 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTR-----------KGTPFVWSPACERS 422
           ++V E++ FLG+  YYR+F++D++++A PLT LTR              P        +S
Sbjct: 379 TSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQS 438

Query: 423 FQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKIHE 482
           F +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E
Sbjct: 439 FNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTE 498

Query: 483 QNYPTHDLELAAVVFALKIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVK 530
           +NY T + E+ A++++L   R YLYG   I++YTDH+ L +    +  N + +RW   ++
Sbjct: 499 ENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIE 544

[Close]
BLAST of Cmc02g0049061 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 3.7e-78
Identity = 170/484 (35.12%), Postives = 267/484 (55.17%), Query Frame = 0 

Query: 65   KASKLLSQGTWGILASVVDVREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 124
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 125  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 184
            +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606  DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 185  FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 244
             V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 666  LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 245  DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSK 304
              D  KTAF +  G YE+ VM FGL NAP+ F   M   F++    FV V++DDILI+S+
Sbjct: 726  PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 305  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 364
            +  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 786  SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 365  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKL 424
              P TV + + FLG+  YYRRF+ + S+IA P+       +   W+   +++ ++LK  L
Sbjct: 846  PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIEKLKAAL 905

Query: 425  VTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYPTH 484
              +PVL   +   N+ + +DASK G+G VL +         VV Y S+ L+  ++NYP  
Sbjct: 906  CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 965

Query: 485  DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEIL 529
            +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + 
Sbjct: 966  ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 1023

[Close]
BLAST of Cmc02g0049061 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 293.5 bits (750), Expect = 4.8e-78
Identity = 170/484 (35.12%), Postives = 266/484 (54.96%), Query Frame = 0 

Query: 65  KASKLLSQGTWGILASVVDVREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 124
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 125 EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 184
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 185 FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 244
            V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 245 DGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSK 304
             D  KTAF +  G YE+ VM FGL NAP+ F   M   F++    FV V++DDILI+S+
Sbjct: 700 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 305 TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW 364
           +  EH +HL  VLE L+   L  K  KC+F   +  FLG+ +  + ++    K  A+ ++
Sbjct: 760 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 365 TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKL 424
             P TV + + FLG+  YYRRF+ + S+IA P+       +   W+   +++  +LK  L
Sbjct: 820 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIDKLKDAL 879

Query: 425 VTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYPTH 484
             +PVL   +   N+ + +DASK G+G VL +         VV Y S+ L+  ++NYP  
Sbjct: 880 CNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAG 939

Query: 485 DLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEIL 529
           +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + 
Sbjct: 940 ELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLE 997

[Close]
BLAST of Cmc02g0049061 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 3.9e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 837  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 896

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 897  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 956

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 957  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1005

[Close]
BLAST of Cmc02g0049061 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 3.9e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 837  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 896

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 897  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 956

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 957  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1005

[Close]
BLAST of Cmc02g0049061 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 3.9e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 837  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 896

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 897  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 956

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 957  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1005

[Close]
BLAST of Cmc02g0049061 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 3.9e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 477  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 536

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 537  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 596

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 597  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 656

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 657  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 716

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 717  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 776

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 777  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 836

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 837  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 896

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 897  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 956

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 957  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1005

[Close]
BLAST of Cmc02g0049061 vs. ExPASy TrEMBL
Match: A0A5D3DY07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00520 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 3.9e-310
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 

Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 828  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 887

Query: 61   ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA
Sbjct: 888  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 947

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 948  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1007

Query: 181  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR
Sbjct: 1008 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1067

Query: 241  SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1068 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKEFLDSFVIVFIDDILIYSKTEAEHEEHLH 1127

Query: 301  QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
Sbjct: 1128 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1187

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD
Sbjct: 1188 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1247

Query: 421  GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480
            GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH
Sbjct: 1248 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1307

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 530
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Sbjct: 1308 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK 1356

[Close]
BLAST of Cmc02g0049061 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 7.4e-26
Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 0 

Query: 298 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPST 357
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 358 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPV 417
            +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 418 LTVPD 421
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:
BLAST of Cmc02g0049061 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0031437.18.2e-310100.00pol protein [Cucumis melo var. makuwa][more]
KAA0033825.18.2e-310100.00pol protein [Cucumis melo var. makuwa][more]
KAA0025848.18.2e-310100.00pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v... [more]
TYK28422.18.2e-310100.00pol protein [Cucumis melo var. makuwa][more]
TYK28368.18.2e-310100.00pol protein [Cucumis melo var. makuwa][more]
BLAST of Cmc02g0049061 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043233.1e-8539.05Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208255.5e-8237.41Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P97.9e-8132.25Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Q7LHG53.7e-7835.12Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q993154.8e-7835.12Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc02g0049061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CQB53.9e-310100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
A0A5A7UBS13.9e-310100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13... [more]
A0A5A7TEQ23.9e-310100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19... [more]
A0A5A7TSL03.9e-310100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19... [more]
A0A5D3DY073.9e-310100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold62... [more]
BLAST of Cmc02g0049061 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.17.4e-2643.20DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 118..257
e-value: 9.3E-95
score: 317.9
NoneNo IPR availablePFAMPF08284RVP_2coord: 4..42
e-value: 1.2E-12
score: 47.8
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 6..530
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 6..530
NoneNo IPR availableCDDcd01647RT_LTRcoord: 156..332
e-value: 1.5077E-98
score: 293.733
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 426..531
e-value: 6.52016E-52
score: 170.751
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 1..49
e-value: 3.5E-8
score: 35.3
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 197..332
e-value: 9.3E-95
score: 317.9
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 342..433
e-value: 3.7E-32
score: 112.2
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 423..519
e-value: 5.2E-34
score: 116.7
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 172..331
e-value: 3.8E-28
score: 98.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 153..332
score: 10.536036
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 96..525

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0049061.1Cmc02g0049061.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:1901800 positive regulation of proteasomal protein catabolic process
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0000502 proteasome complex
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0036402 proteasome-activating activity
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008194 UDP-glycosyltransferase activity
molecular_function GO:0008270 zinc ion binding