Cmc02g0048721 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0048721
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr02: 14316244 .. 14317791 (-)
RNA-Seq Expression	Cmc02g0048721
Synteny	Cmc02g0048721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGATACAGACCTTCAAAGTTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTAACTATGAGGAAACTTTTTTCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGTCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAAAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAAAAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGAACGATATCCTCCTCATTGGAAATGATGTGGGATACCTTATTGATGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGTACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAATGCTAGCACTGTCTCAAGCAATCTATATTGACAAAATGTTGGTTCGATATTCGATGTAGAACTCTAAGAAGGGTTTATTACCTTTCAGACATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTAAGGATATGAGACGTACTCCTTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGTACTAGGCCAGACATTTGTTATGCAGTGAGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGTGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTATGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTAAAGCAGCAAAAGAAACAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTTTTCCAAACATGAACTTGCCCATCATTTTATATTTTGATAATAGTGGGACGGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACTAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACTGTTCAAGTGGGAGATGTGTAATGGGTATGATGATGCCCTAG

mRNA sequence

ATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGATACAGACCTTCAAAGTTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTAACTATGAGGAAACTTTTTTCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGTCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAAAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAAAAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGAACGATATCCTCCTCATTGGAAATGATGTGGGATACCTTATTGATGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGAACTCTAAGAAGGGTTTATTACCTTTCAGACATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTAAGGATATGAGACGTACTCCTTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGTACTAGGCCAGACATTTGTTATGCAGTGAGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGTGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTATGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTAAAGCAGCAAAAGAAACAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTTTTCCAAACATGAACTTGCCCATCATTTTATATTTTGATAATAGTGGGACGGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACTAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACTGTTCAAGTGGGAGATGTGTAATGGGTATGATGATGCCCTAG

Coding sequence (CDS)

ATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGATACAGACCTTCAAAGTTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTAACTATGAGGAAACTTTTTTCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGTCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAAAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAAAAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGAACGATATCCTCCTCATTGGAAATGATGTGGGATACCTTATTGATGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGAACTCTAAGAAGGGTTTATTACCTTTCAGACATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTAAGGATATGAGACGTACTCCTTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGTACTAGGCCAGACATTTGTTATGCAGTGAGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGTGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTATGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTAAAGCAGCAAAAGAAACAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTTTTCCAAACATGAACTTGCCCATCATTTTATATTTTGATAATAGTGGGACGGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACTAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACTGTTCAAGTGGGAGATGTGTAATGGGTATGATGATGCCCTAG

Protein sequence

MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILLIGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYCSSGRCVMGMMMP

Homology

[Close]

BLAST of Cmc02g0048721 vs. NCBI nr
Match: KAA0050103.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 936.8 bits (2420), Expect = 7.4e-269
Identity = 458/462 (99.13%), Postives = 458/462 (99.13%), Query Frame = 0


Query: 5   MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEE 64
           MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEE
Sbjct: 1   MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEE 60

Query: 65  TFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKV 124
           TFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKV
Sbjct: 61  TFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKV 120

Query: 125 CKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILL 184
           CKLNRSIYGLKKASRSWNIRFD AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILL
Sbjct: 121 CKLNRSIYGLKKASRSWNIRFDIAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILL 180

Query: 185 IGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTP 244
           IGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTP
Sbjct: 181 IGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTP 240

Query: 245 YASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGA 304
           YASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGA
Sbjct: 241 YASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGA 300

Query: 305 KDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKA 364
           KDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKA
Sbjct: 301 KDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKA 360

Query: 365 AKETVWLRKFLHDLEVFPNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIV 424
           AKETVWLRKFLHDLE  PNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIV
Sbjct: 361 AKETVWLRKFLHDLEFVPNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIV 420

Query: 425 QRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMY 467
           QRGDVIVTKIASEHNI DPFTKTLTAKVFEGHLESLGLRDMY
Sbjct: 421 QRGDVIVTKIASEHNITDPFTKTLTAKVFEGHLESLGLRDMY 462

[Close]

BLAST of Cmc02g0048721 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 888.6 bits (2295), Expect = 2.3e-254
Identity = 443/502 (88.25%), Postives = 451/502 (89.84%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK+QTFK RLVAKGYTQREGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 791

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ
Sbjct: 792  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
            +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------------------------ 240
            DILLIGNDVGYL DVKAWLAAQFQMKDLGE                              
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  ------NSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDIC 300
                  NSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRR PYASAVGSLMY MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSR 360
            YAV IVSRYQSNPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 1091

Query: 361  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNM 420
            KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC+AAKE VWLRKFLHDLEV PNM
Sbjct: 1092 KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1151

Query: 421  NLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 467
            NLPI LY DNSG VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

[Close]

BLAST of Cmc02g0048721 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 888.6 bits (2295), Expect = 2.3e-254
Identity = 443/502 (88.25%), Postives = 451/502 (89.84%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK+QTFK RLVAKGYTQREGV
Sbjct: 606  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 665

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ
Sbjct: 666  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 725

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
            +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 726  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 785

Query: 181  DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------------------------ 240
            DILLIGNDVGYL DVKAWLAAQFQMKDLGE                              
Sbjct: 786  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 845

Query: 241  ------NSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDIC 300
                  NSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRR PYASAVGSLMY MLCTRPDIC
Sbjct: 846  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 905

Query: 301  YAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSR 360
            YAV IVSRYQSNPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSR
Sbjct: 906  YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 965

Query: 361  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNM 420
            KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC+AAKE VWLRKFLHDLEV PNM
Sbjct: 966  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1025

Query: 421  NLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 467
            NLPI LY DNSG VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF
Sbjct: 1026 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1085

[Close]

BLAST of Cmc02g0048721 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 874.8 bits (2259), Expect = 3.5e-250
Identity = 437/502 (87.05%), Postives = 448/502 (89.24%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK+QTFK RLVAKGYT++EGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGV 791

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF  VAMLKSIRILLSI  FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ
Sbjct: 792  DYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
            +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------------------------ 240
            DILLIGNDVGYL DVKAWLAAQFQMKDLGE                              
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  ------NSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDIC 300
                  NSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRR PYASAVGSLMY MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSR 360
            YAV IVSRYQSNPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYT+ DFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSR 1091

Query: 361  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNM 420
            KSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC+AAKE VWL+KFLHDLEV PNM
Sbjct: 1092 KSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNM 1151

Query: 421  NLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 467
            NLPI LY DNSG VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

[Close]

BLAST of Cmc02g0048721 vs. NCBI nr
Match: KAA0034955.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK21310.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 854.0 bits (2205), Expect = 6.3e-244
Identity = 423/478 (88.49%), Postives = 438/478 (91.63%), Query Frame = 0


Query: 1   MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
           MDLEMESMYFN VWE+VDLPEGVKPIGCKWIYKRKRDSAGK+QTFK R VAKGYTQREGV
Sbjct: 1   MDLEMESMYFNLVWEIVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARFVAKGYTQREGV 60

Query: 61  NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
           +YEETF PVAMLKSIRILLSI TFYDYEIW+MDVKTAFLN NLEESIFMSQ EGFITQGQ
Sbjct: 61  DYEETFSPVAMLKSIRILLSIATFYDYEIWKMDVKTAFLNDNLEESIFMSQHEGFITQGQ 120

Query: 121 KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
           +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 121 EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 180

Query: 181 DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------NSKKGLLPFRHGVHLSKE 240
           DILLIGNDVGYL D+KAWLAAQFQMKDLGE            +SKK LLPFRHGVHLSKE
Sbjct: 181 DILLIGNDVGYLTDIKAWLAAQFQMKDLGETQYVLGIQIIRDHSKKDLLPFRHGVHLSKE 240

Query: 241 QCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKII 300
           QCPKTPQEV++MRR  Y SAVGSLMY MLCTRPDICYAV IVSRYQSNPGLDHWTVVKII
Sbjct: 241 QCPKTPQEVENMRRISYGSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTVVKII 300

Query: 301 LKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 360
           LKYLRRTRDYMLVYGAKDLILTGYT   FQTDKDSRKSTS SVF LNGGAVVWRSIKQGC
Sbjct: 301 LKYLRRTRDYMLVYGAKDLILTGYT--HFQTDKDSRKSTSRSVFILNGGAVVWRSIKQGC 360

Query: 361 IADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNLPIILYFDNSGTVANSKEPRSHK 420
           IADSTMEAEYVAAC+AAKE VWLRKFLHDLEV  NMNLP+ LY DNSG +ANSKEPRSHK
Sbjct: 361 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVLNMNLPMTLYCDNSGAIANSKEPRSHK 420

Query: 421 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMY 467
           RGKHIERKYH+IREIVQRGD IVTKIASEHNIADPFTKTLT  VFEGHLESLGLRDMY
Sbjct: 421 RGKHIERKYHMIREIVQRGDAIVTKIASEHNIADPFTKTLTTNVFEGHLESLGLRDMY 476

[Close]

BLAST of Cmc02g0048721 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 8.3e-114
Identity = 212/499 (42.48%), Postives = 304/499 (60.92%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            M  EMES+  N  ++LV+LP+G +P+ CKW++K K+D   K+  +K RLV KG+ Q++G+
Sbjct: 830  MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +++E F PV  + SIR +LS+    D E+ Q+DVKTAFL+G+LEE I+M QPEGF   G+
Sbjct: 890  DFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK 949

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYV 180
            K  VCKLN+S+YGLK+A R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYV
Sbjct: 950  KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYV 1009

Query: 181  NDILLIGNDVGYLIDVKAWLAAQFQMKDLG------------------------------ 240
            +D+L++G D G +  +K  L+  F MKDLG                              
Sbjct: 1010 DDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERV 1069

Query: 241  ------ENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDI 300
                  +N+K    P    + LSK+ CP T +E  +M + PY+SAVGSLMY M+CTRPDI
Sbjct: 1070 LERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDI 1129

Query: 301  CYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDS 360
             +AV +VSR+  NPG +HW  VK IL+YLR T    L +G  D IL GYTD D   D D+
Sbjct: 1130 AHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDN 1189

Query: 361  RKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPN 420
            RKS++G +FT +GGA+ W+S  Q C+A ST EAEY+AA +  KE +WL++FL +L +   
Sbjct: 1190 RKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK 1249

Query: 421  MNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADP 463
                 ++Y D+   +  SK    H R KHI+ +YH IRE+V    + V KI++  N AD 
Sbjct: 1250 ---EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADM 1309

[Close]

BLAST of Cmc02g0048721 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 295.0 bits (754), Expect = 1.5e-78
Identity = 173/495 (34.95%), Postives = 271/495 (54.75%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            ++ E+ +   N+ W +   PE    +  +W++  K +  G    +K RLVA+G+TQ+  +
Sbjct: 910  INTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQI 969

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF PVA + S R +LS+V  Y+ ++ QMDVKTAFLNG L+E I+M  P+G      
Sbjct: 970  DYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCN 1029

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLY 180
               VCKLN++IYGLK+A+R W   F+ A+K   F  +  + C+Y   K N  +  +++LY
Sbjct: 1030 SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLY 1089

Query: 181  VNDILLIGNDVGYLIDVKAWLAAQFQMKDLGE---------NSKKGLLPFRHGVHLSK-- 240
            V+D+++   D+  + + K +L  +F+M DL E           ++  +      ++ K  
Sbjct: 1090 VDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKIL 1149

Query: 241  -----EQC--PKTPQEVK---------DMRRTPYASAVGSLMYVMLCTRPDICYAVRIVS 300
                 E C    TP   K         +   TP  S +G LMY+MLCTRPD+  AV I+S
Sbjct: 1150 SKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1209

Query: 301  RYQSNPGLDHWTVVKIILKYLRRTRDYMLVYG---AKDLILTGYTDYDFQTDKDSRKSTS 360
            RY S    + W  +K +L+YL+ T D  L++    A +  + GY D D+   +  RKST+
Sbjct: 1210 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1269

Query: 361  GSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNLP 420
            G +F + +   + W + +Q  +A S+ EAEY+A  +A +E +WL+  L  + +   +  P
Sbjct: 1270 GYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENP 1329

Query: 421  IILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKT 463
            I +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ   + +  I +E+ +AD FTK 
Sbjct: 1330 IKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKP 1389

[Close]

BLAST of Cmc02g0048721 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.0e-71
Identity = 164/496 (33.06%), Postives = 250/496 (50.40%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREG 60
            M  E+ +   N  W+LV   P  V  +GC+WI+ +K +S G +  +K RLVAKGY QR G
Sbjct: 955  MGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPG 1014

Query: 61   VNYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQG 120
            ++Y ETF PV    SIRI+L +     + I Q+DV  AFL G L + ++MSQP GF+ + 
Sbjct: 1015 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKD 1074

Query: 121  QKQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV 180
            +   VC+L ++IYGLK+A R+W +   T + + GF  ++ +  ++       + ++++YV
Sbjct: 1075 RPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYV 1134

Query: 181  NDILLIGNDVGYLIDVKAWLAAQFQMKD-------LGENSKKGLLPFRHGVHLSKEQ--- 240
            +DIL+ GND   L      L+ +F +K+       LG  +K+       G+HLS+ +   
Sbjct: 1135 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKR----VPQGLHLSQRRYTL 1194

Query: 241  --------------------CPKTP--QEVKDMRRTPYASAVGSLMYVMLCTRPDICYAV 300
                                 PK       K    T Y   VGSL Y+   TRPD+ YAV
Sbjct: 1195 DLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAF-TRPDLSYAV 1254

Query: 301  RIVSRYQSNPGLDHWTVVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKS 360
              +S+Y   P  DHW  +K +L+YL  T D+ + +     L L  Y+D D+  D D   S
Sbjct: 1255 NRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVS 1314

Query: 361  TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNL 420
            T+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   ++ 
Sbjct: 1315 TNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSH 1374

Query: 421  PIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTK 463
            P ++Y DN G       P  H R KHI   YH IR  VQ G + V  +++   +AD  TK
Sbjct: 1375 PPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTK 1434

[Close]

BLAST of Cmc02g0048721 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.3e-70
Identity = 165/496 (33.27%), Postives = 249/496 (50.20%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREG 60
            M  E+ +   N  W+LV  P   V  +GC+WI+ +K +S G +  +K RLVAKGY QR G
Sbjct: 972  MGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPG 1031

Query: 61   VNYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQG 120
            ++Y ETF PV    SIRI+L +     + I Q+DV  AFL G L + ++MSQP GFI + 
Sbjct: 1032 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKD 1091

Query: 121  QKQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV 180
            +   VCKL +++YGLK+A R+W +     + + GF  +V +  ++       + ++++YV
Sbjct: 1092 RPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYV 1151

Query: 181  NDILLIGNDVGYLIDVKAWLAAQFQMKD-------LGENSKKGLLPFRHGVHLSKEQ--- 240
            +DIL+ GND   L +    L+ +F +KD       LG  +K+       G+HLS+ +   
Sbjct: 1152 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKR----VPTGLHLSQRRYIL 1211

Query: 241  ---------------CPKTPQE-------VKDMRRTPYASAVGSLMYVMLCTRPDICYAV 300
                            P  P          K    T Y   VGSL Y+   TRPDI YAV
Sbjct: 1212 DLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAF-TRPDISYAV 1271

Query: 301  RIVSRYQSNPGLDHWTVVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRKS 360
              +S++   P  +H   +K IL+YL  T ++ + +     L L  Y+D D+  DKD   S
Sbjct: 1272 NRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVS 1331

Query: 361  TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNL 420
            T+G +  L    + W S KQ  +  S+ EAEY +    + E  W+   L +L +   +  
Sbjct: 1332 TNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTR 1391

Query: 421  PIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTK 463
            P ++Y DN G       P  H R KHI   YH IR  VQ G + V  +++   +AD  TK
Sbjct: 1392 PPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTK 1451

[Close]

BLAST of Cmc02g0048721 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 6.3e-29
Identity = 96/309 (31.07%), Postives = 137/309 (44.34%), Query Frame = 0


Query: 92  MDVKTAFLNGNLEESIFMSQPEGFITQGQKQKVCKLNRSIYGLKKASRSWNIRFDTAIKS 151
           MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLK+A   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 152 YGFDQNVDEPCVYKKINKGKVAFLVLYVNDILLIGNDVGYLIDVKAWLAAQFQMKDLGE- 211
            GF ++  E  +Y +       ++ +YV+D+L+          VK  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 212 ---------NSKKGLLPFRHGVHLSK------------EQCP---------KTPQEVKDM 271
                     S  G +      +++K             Q P          T   +KD+
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 272 RRTPYASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYML 331
             TPY S VG L++     RPDI Y V ++SR+   P   H    + +L+YL  TR   L
Sbjct: 181 --TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCL 240

Query: 332 VY-GAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADSTMEAEY 368
            Y     L LT Y D       D   ST G V  L G  V W S K +G I   + EAEY
Sbjct: 241 KYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEY 300

[Close]

BLAST of Cmc02g0048721 vs. ExPASy TrEMBL
Match: A0A5A7U2H0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001170 PE=4 SV=1)

HSP 1 Score: 936.8 bits (2420), Expect = 3.6e-269
Identity = 458/462 (99.13%), Postives = 458/462 (99.13%), Query Frame = 0


Query: 5   MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEE 64
           MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEE
Sbjct: 1   MESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGVNYEE 60

Query: 65  TFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKV 124
           TFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKV
Sbjct: 61  TFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQKQKV 120

Query: 125 CKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILL 184
           CKLNRSIYGLKKASRSWNIRFD AIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILL
Sbjct: 121 CKLNRSIYGLKKASRSWNIRFDIAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVNDILL 180

Query: 185 IGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTP 244
           IGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTP
Sbjct: 181 IGNDVGYLIDVKAWLAAQFQMKDLGENSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTP 240

Query: 245 YASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGA 304
           YASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGA
Sbjct: 241 YASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGA 300

Query: 305 KDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKA 364
           KDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKA
Sbjct: 301 KDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKA 360

Query: 365 AKETVWLRKFLHDLEVFPNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIV 424
           AKETVWLRKFLHDLE  PNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIV
Sbjct: 361 AKETVWLRKFLHDLEFVPNMNLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIV 420

Query: 425 QRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMY 467
           QRGDVIVTKIASEHNI DPFTKTLTAKVFEGHLESLGLRDMY
Sbjct: 421 QRGDVIVTKIASEHNITDPFTKTLTAKVFEGHLESLGLRDMY 462

[Close]

BLAST of Cmc02g0048721 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 888.6 bits (2295), Expect = 1.1e-254
Identity = 443/502 (88.25%), Postives = 451/502 (89.84%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK+QTFK RLVAKGYTQREGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 791

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ
Sbjct: 792  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
            +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------------------------ 240
            DILLIGNDVGYL DVKAWLAAQFQMKDLGE                              
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  ------NSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDIC 300
                  NSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRR PYASAVGSLMY MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSR 360
            YAV IVSRYQSNPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 1091

Query: 361  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNM 420
            KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC+AAKE VWLRKFLHDLEV PNM
Sbjct: 1092 KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1151

Query: 421  NLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 467
            NLPI LY DNSG VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

[Close]

BLAST of Cmc02g0048721 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 888.6 bits (2295), Expect = 1.1e-254
Identity = 443/502 (88.25%), Postives = 451/502 (89.84%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK+QTFK RLVAKGYTQREGV
Sbjct: 606  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 665

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF PVAMLKSIRILLSI TFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ
Sbjct: 666  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 725

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
            +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 726  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 785

Query: 181  DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------------------------ 240
            DILLIGNDVGYL DVKAWLAAQFQMKDLGE                              
Sbjct: 786  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 845

Query: 241  ------NSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDIC 300
                  NSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRR PYASAVGSLMY MLCTRPDIC
Sbjct: 846  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 905

Query: 301  YAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSR 360
            YAV IVSRYQSNPGLDHWT VKI+LKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSR
Sbjct: 906  YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 965

Query: 361  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNM 420
            KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC+AAKE VWLRKFLHDLEV PNM
Sbjct: 966  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1025

Query: 421  NLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 467
            NLPI LY DNSG VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF
Sbjct: 1026 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1085

[Close]

BLAST of Cmc02g0048721 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.7e-250
Identity = 437/502 (87.05%), Postives = 448/502 (89.24%), Query Frame = 0


Query: 1    MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
            MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGK+QTFK RLVAKGYT++EGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGV 791

Query: 61   NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
            +YEETF  VAMLKSIRILLSI  FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ
Sbjct: 792  DYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
            +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------------------------ 240
            DILLIGNDVGYL DVKAWLAAQFQMKDLGE                              
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  ------NSKKGLLPFRHGVHLSKEQCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDIC 300
                  NSKKGLLPFRHGVHLSKEQ PKTPQEV+DMRR PYASAVGSLMY MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YAVRIVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSR 360
            YAV IVSRYQSNPGLDHWT VKIILKYLRRTRDYMLVYGAKDLILTGYT+ DFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSR 1091

Query: 361  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNM 420
            KSTS SVFTLNGGAVVWRSIKQGCIADSTMEAEYVAAC+AAKE VWL+KFLHDLEV PNM
Sbjct: 1092 KSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNM 1151

Query: 421  NLPIILYFDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 467
            NLPI LY DNSG VANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

[Close]

BLAST of Cmc02g0048721 vs. ExPASy TrEMBL
Match: A0A5A7T0G5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00190 PE=4 SV=1)

HSP 1 Score: 854.0 bits (2205), Expect = 3.1e-244
Identity = 423/478 (88.49%), Postives = 438/478 (91.63%), Query Frame = 0


Query: 1   MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
           MDLEMESMYFN VWE+VDLPEGVKPIGCKWIYKRKRDSAGK+QTFK R VAKGYTQREGV
Sbjct: 1   MDLEMESMYFNLVWEIVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARFVAKGYTQREGV 60

Query: 61  NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 120
           +YEETF PVAMLKSIRILLSI TFYDYEIW+MDVKTAFLN NLEESIFMSQ EGFITQGQ
Sbjct: 61  DYEETFSPVAMLKSIRILLSIATFYDYEIWKMDVKTAFLNDNLEESIFMSQHEGFITQGQ 120

Query: 121 KQKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVN 180
           +QKVCKLNRSIYGLK+ASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYV+
Sbjct: 121 EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 180

Query: 181 DILLIGNDVGYLIDVKAWLAAQFQMKDLGE------------NSKKGLLPFRHGVHLSKE 240
           DILLIGNDVGYL D+KAWLAAQFQMKDLGE            +SKK LLPFRHGVHLSKE
Sbjct: 181 DILLIGNDVGYLTDIKAWLAAQFQMKDLGETQYVLGIQIIRDHSKKDLLPFRHGVHLSKE 240

Query: 241 QCPKTPQEVKDMRRTPYASAVGSLMYVMLCTRPDICYAVRIVSRYQSNPGLDHWTVVKII 300
           QCPKTPQEV++MRR  Y SAVGSLMY MLCTRPDICYAV IVSRYQSNPGLDHWTVVKII
Sbjct: 241 QCPKTPQEVENMRRISYGSAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTVVKII 300

Query: 301 LKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 360
           LKYLRRTRDYMLVYGAKDLILTGYT   FQTDKDSRKSTS SVF LNGGAVVWRSIKQGC
Sbjct: 301 LKYLRRTRDYMLVYGAKDLILTGYT--HFQTDKDSRKSTSRSVFILNGGAVVWRSIKQGC 360

Query: 361 IADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNLPIILYFDNSGTVANSKEPRSHK 420
           IADSTMEAEYVAAC+AAKE VWLRKFLHDLEV  NMNLP+ LY DNSG +ANSKEPRSHK
Sbjct: 361 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVLNMNLPMTLYCDNSGAIANSKEPRSHK 420

Query: 421 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMY 467
           RGKHIERKYH+IREIVQRGD IVTKIASEHNIADPFTKTLT  VFEGHLESLGLRDMY
Sbjct: 421 RGKHIERKYHMIREIVQRGDAIVTKIASEHNIADPFTKTLTTNVFEGHLESLGLRDMY 476

[Close]

BLAST of Cmc02g0048721 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 261.9 bits (668), Expect = 9.9e-70
Identity = 156/455 (34.29%), Postives = 248/455 (54.51%), Query Frame = 0


Query: 1   MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
           MD E+ +M     WE+  LP   KPIGCKW+YK K +S G I+ +K RLVAKGYTQ+EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  NYEETFFPVAMLKSIRILLSIVTFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT-QG 120
           ++ ETF PV  L S++++L+I   Y++ + Q+D+  AFLNG+L+E I+M  P G+   QG
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221

Query: 121 QK---QKVCKLNRSIYGLKKASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLV 180
                  VC L +SIYGLK+ASR W ++F   +  +GF Q+  +   + KI       ++
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281

Query: 181 LYVNDILLIGNDVGYLIDVKAWLAAQFQMKDLG----------ENSKKG--LLPFRHGVH 240
           +YV+DI++  N+   + ++K+ L + F+++DLG            S  G  +   ++ + 
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALD 341

Query: 241 LSKE---------QCPKTPQEVKD-------MRRTPYASAVGSLMYVMLCTRPDICYAVR 300
           L  E           P  P            +    Y   +G LMY+ + TR DI +AV 
Sbjct: 342 LLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVN 401

Query: 301 IVSRYQSNPGLDHWTVVKIILKYLRRTRDYMLVYGAK-DLILTGYTDYDFQTDKDSRKST 360
            +S++   P L H   V  IL Y++ T    L Y ++ ++ L  ++D  FQ+ KD+R+ST
Sbjct: 402 KLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRST 461

Query: 361 SGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVWLRKFLHDLEVFPNMNLP 420
           +G    L    + W+S KQ  ++ S+ EAEY A   A  E +WL +F  +L++   ++ P
Sbjct: 462 NGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKP 521

Query: 421 IILYFDNSGTVANSKEPRSHKRGKHIERKYHLIRE 423
            +L+ DN+  +  +     H+R KHIE   H +RE
Sbjct: 522 TLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc02g0048721 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-13
Identity = 66/225 (29.33%), Postives = 108/225 (48.00%), Query Frame = 0


Query: 174 FLVLYVNDILLIGNDVGYLIDVKAWLAAQFQMKDLGE-NSKKGLLPFRH--GVHLSKEQC 233
           +L+LYV+DILL G+    L  +   L++ F MKDLG  +   G+    H  G+ LS+ + 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 234 PK---------------TPQEVK-----DMRRTP----YASAVGSLMYVMLCTRPDICYA 293
            +               TP  +K        + P    + S VG+L Y+ L TRPDI YA
Sbjct: 62  AEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTL-TRPDISYA 121

Query: 294 VRIVSRYQSNPGLDHWTVVKIILKYLRRTRDY-MLVYGAKDLILTGYTDYDFQTDKDSRK 353
           V IV +    P L  + ++K +L+Y++ T  + + ++    L +  + D D+     +R+
Sbjct: 122 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 181

Query: 354 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACKAAKETVW 371
           ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc02g0048721 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-12
Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 1   MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKIQTFKVRLVAKGYTQREGV 60
           M  E++++  N  W LV  P     +GCKW++K K  S G +   K RLVAKG+ Q EG+
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  NYEETFFPVAMLKSIRILLSI 82
            + ET+ PV    +IR +L++
Sbjct: 104 YFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:

BLAST of Cmc02g0048721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050103.1	7.4e-269	99.13	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	2.3e-254	88.25	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	2.3e-254	88.25	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	3.5e-250	87.05	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0034955.1	6.3e-244	88.49	gag/pol protein [Cucumis melo var. makuwa] >TYK21310.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc02g0048721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	8.3e-114	42.48	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.5e-78	34.95	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.0e-71	33.06	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.3e-70	33.27	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	6.3e-29	31.07	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc02g0048721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2H0	3.6e-269	99.13	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0011...	[more]
A0A5A7TZD0	1.1e-254	88.25	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	1.1e-254	88.25	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	1.7e-250	87.05	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7T0G5	3.1e-244	88.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G001...	[more]

BLAST of Cmc02g0048721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	9.9e-70	34.29	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.9e-13	29.33	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.9e-12	39.51	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 11..213 e-value: 2.0E-62 score: 211.0
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..318
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 310..451 e-value: 1.52006E-62 score: 198.076
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 11..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0048721.1	Cmc02g0048721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding