Cmc02g0047741 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0047741
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 13285280 .. 13287321 (+)
RNA-Seq Expression	Cmc02g0047741
Synteny	Cmc02g0047741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGATCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAGACAACATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTCTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGATGGTTTTTGCTTTAAAAATATGGAGGCATTATTTATATGGTGAAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCAATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAAACCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGTCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGTAG

mRNA sequence

ATGCTTGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGATCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAGACAACATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGTGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGATGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCAATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAAACCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGTCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGTAG

Coding sequence (CDS)

ATGCTTGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTGCAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGATCGGGATACCATCAGCTGAGGATTAAGGATGGGGATGTACCGAAGACAACATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGTGTGTCTTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCGTGTGAGGATAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGATGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCAATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAAACCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGGTGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGAGGGGTTCTCCATATCCTCTGATGGTGGACTTGTGTTTGAGAGACGCCTCTGTGTGTCGTCAGATAGTGCGATTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGTAG

Protein sequence

MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNSVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPR

Homology

[Close]

BLAST of Cmc02g0047741 vs. NCBI nr
Match: KAA0040188.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 596/680 (87.65%), Postives = 598/680 (87.94%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL
Sbjct: 579  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 638

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 639  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 698

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 699  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 758

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIV
Sbjct: 759  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 818

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFMDLMN                                           
Sbjct: 819  MSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNK 878

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 879  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 938

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 939  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 998

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAM-----------------IF 480
            ASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+                 IF
Sbjct: 999  ASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIF 1058

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1059 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1118

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
             A LHRDLERAEIAVSVGA+TMQL QLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1119 HAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1178

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
            GFSISSDGGLVFERRLCV SDSAIK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1179 GFSISSDGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMK 1238

[Close]

BLAST of Cmc02g0047741 vs. NCBI nr
Match: KAA0053368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 592/680 (87.06%), Postives = 596/680 (87.65%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRK VTFNPPSMASFKFKGGGSRSLPQVISAIRASKL 
Sbjct: 642  MLDFDVILGMDWLAANHASIDCSRKGVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLF 701

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 702  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 761

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 762  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 821

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIV
Sbjct: 822  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 881

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFM+LMN                                           
Sbjct: 882  MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 941

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 942  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1001

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 1002 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 1061

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMIF----------------- 480
            ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAA++F                 
Sbjct: 1062 ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 1121

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1122 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1181

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
            QA LHRDLERAEIAVSVGAVTMQL QLTVQ TLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1182 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1241

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
            GFSISSDGGL FERRLCV SDS IKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1242 GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1301

[Close]

BLAST of Cmc02g0047741 vs. NCBI nr
Match: KAA0036553.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 588/657 (89.50%), Postives = 593/657 (90.26%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 341 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 400

Query: 61  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP TVPI
Sbjct: 401 SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPDTVPI 460

Query: 121 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 461 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 520

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
           VTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIV
Sbjct: 521 VTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 580

Query: 241 MSFGLTNAPAVFMDLMNS---------------------------------VSFLGHVVS 300
           MSFGLTNAPAVFMDLMN                                  VSFLGHVVS
Sbjct: 581 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVSFLGHVVS 640

Query: 301 KAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 360
           KAGVSVDPAKIEAVTGWTRPSTVSE RSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF
Sbjct: 641 KAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPF 700

Query: 361 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ 420
           VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ
Sbjct: 701 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ 760

Query: 421 LKSHEQNYPTHDLELAAM-----------------IFTDHKSLKYFFTQKELNMRQRRWL 480
           LKSHEQNYPTHDLELAA+                 IFTDHKSLKYFFTQKELNMRQRRWL
Sbjct: 761 LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL 820

Query: 481 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAQLHRDLERAEIAVSVGAVTMQ 540
           ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ
Sbjct: 821 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ 880

Query: 541 LNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVSSDSA 600
           L QLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCV SDSA
Sbjct: 881 LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSA 940

Query: 601 IKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPR 608
           +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF SRCLVCQQVKAPR
Sbjct: 941 VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPR 997

[Close]

BLAST of Cmc02g0047741 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 591/680 (86.91%), Postives = 596/680 (87.65%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 488  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 547

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 548  SQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 607

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 608  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 667

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRSRYGHYEFIV
Sbjct: 668  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 727

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFMDLMN                                           
Sbjct: 728  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNK 787

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 788  LYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 847

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 848  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 907

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAM-----------------IF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+                 IF
Sbjct: 908  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 967

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 968  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1027

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
            QA LHRDLERAEIAVSVGAVTMQL QLTVQPTLRQRII AQSNDPYLVEKRGLAE GQA 
Sbjct: 1028 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAV 1087

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
             FS+SSDGGL+FERRLCV SDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1088 EFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1147

[Close]

BLAST of Cmc02g0047741 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1142.9 bits (2955), Expect = 0.0e+00
Identity = 589/680 (86.62%), Postives = 595/680 (87.50%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRSRYGHYEFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFMDLMN                                           
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAM-----------------IF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+                 IF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
            QA LHRDLERAEIAVSVGAVTMQL QLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
             FS+SSDGGL+FERRLCV SDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1308 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1367

[Close]

BLAST of Cmc02g0047741 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.9e-62
Identity = 139/411 (33.82%), Postives = 212/411 (51.58%), Query Frame = 0


Query: 125 YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELN 184
           Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 185 KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFI 244
           ++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    V KT F +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 245 VMSFGLTNAPAVFMDLMNSV---------------------------------------- 304
            M FGL NAPA F   MN +                                        
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 305 ----------------SFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYY 364
                           +FLGHV++  G+  +P KIEA+  +  P+   E+++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 365 RRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY 424
           R+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 425 SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMIF--------------- 457
           +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+++               
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

[Close]

BLAST of Cmc02g0047741 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.2e-62
Identity = 143/465 (30.75%), Postives = 227/465 (48.82%), Query Frame = 0


Query: 89  DYPDVFPEELPGLPPHREVEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDK 148
           ++P +F   L G+     VE A++ E  T    PI    Y        E++ Q+ ELL  
Sbjct: 94  EFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 153

Query: 149 GFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 208
           G IRPS SP+ +P+  V KK     +   R+ +D++ LN VT+ + YP+P I+     L 
Sbjct: 154 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 213

Query: 209 GATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMN--- 268
            A  F+ +DL SG+HQ+ +K+ D+PKT F +  G YEF+ + FGL NAPA+F  +++   
Sbjct: 214 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDIL 273

Query: 269 -----------------------------------------------------SVSFLGH 328
                                                                 V FLG+
Sbjct: 274 REHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGY 333

Query: 329 VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR-- 388
           +V+  G+  DP K+ A++    P++V E++ FLG+  YYR+F+++++++A PLT LTR  
Sbjct: 334 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGL 393

Query: 389 ---------KGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 448
                       P    +    SF +LK  L ++ +L  P  +  F + +DAS   +G V
Sbjct: 394 YANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAV 453

Query: 449 LMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAMI------------------FTDHK 457
           L Q    + + +AY SR L   E+NY T + E+ A+I                  +TDH+
Sbjct: 454 LSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQ 513

[Close]

BLAST of Cmc02g0047741 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-61
Identity = 157/589 (26.66%), Postives = 272/589 (46.18%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNS----------------- 275
            +R++ GD  K  FR   G +E++VM +G++ APA F   +N+                 
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 ---------------------------------------VSFLGHVVSKAGVSVDPAKIE 335
                                                  V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELAAM-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELV 515
           Y   D E+ A+                   I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 516 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAQLHRDLERAEIAVSVGAVTMQLNQ 575
           +D++ EI Y PG AN +ADALSR       ++     + +D E   I          +NQ
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 576 LTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVSSDSAIK 602
           +++    + +++   +ND  L+      +    E   +  DG L+  + ++ + +D+ + 
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL-KDGLLINSKDQILLPNDTQLT 930

[Close]

BLAST of Cmc02g0047741 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-61
Identity = 157/589 (26.66%), Postives = 272/589 (46.18%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNS----------------- 275
            +R++ GD  K  FR   G +E++VM +G++ APA F   +N+                 
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 ---------------------------------------VSFLGHVVSKAGVSVDPAKIE 335
                                                  V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELAAM-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELV 515
           Y   D E+ A+                   I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 516 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAQLHRDLERAEIAVSVGAVTMQLNQ 575
           +D++ EI Y PG AN +ADALSR       ++     + +D E   I          +NQ
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 576 LTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVSSDSAIK 602
           +++    + +++   +ND  L+      +    E   +  DG L+  + ++ + +D+ + 
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL-KDGLLINSKDQILLPNDTQLT 930

[Close]

BLAST of Cmc02g0047741 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-61
Identity = 157/589 (26.66%), Postives = 272/589 (46.18%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNS----------------- 275
            +R++ GD  K  FR   G +E++VM +G++ APA F   +N+                 
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 ---------------------------------------VSFLGHVVSKAGVSVDPAKIE 335
                                                  V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELAAM-------------------IFTDHKSLKYFFTQKE--LNMRQRRWLELV 515
           Y   D E+ A+                   I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 516 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAQLHRDLERAEIAVSVGAVTMQLNQ 575
           +D++ EI Y PG AN +ADALSR       ++     + +D E   I          +NQ
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 576 LTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFER-RLCVSSDSAIK 602
           +++    + +++   +ND  L+      +    E   +  DG L+  + ++ + +D+ + 
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQL-KDGLLINSKDQILLPNDTQLT 930

[Close]

BLAST of Cmc02g0047741 vs. ExPASy TrEMBL
Match: A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 596/680 (87.65%), Postives = 598/680 (87.94%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL
Sbjct: 579  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 638

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 639  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 698

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 699  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 758

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIV
Sbjct: 759  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 818

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFMDLMN                                           
Sbjct: 819  MSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNK 878

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 879  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 938

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 939  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 998

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAM-----------------IF 480
            ASKKGLG VLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+                 IF
Sbjct: 999  ASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIF 1058

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1059 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1118

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
             A LHRDLERAEIAVSVGA+TMQL QLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1119 HAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1178

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
            GFSISSDGGLVFERRLCV SDSAIK ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1179 GFSISSDGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMK 1238

[Close]

BLAST of Cmc02g0047741 vs. ExPASy TrEMBL
Match: A0A5A7UE75 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00240 PE=4 SV=1)

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 592/680 (87.06%), Postives = 596/680 (87.65%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRK VTFNPPSMASFKFKGGGSRSLPQVISAIRASKL 
Sbjct: 642  MLDFDVILGMDWLAANHASIDCSRKGVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLF 701

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 702  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 761

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 762  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 821

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIV
Sbjct: 822  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 881

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFM+LMN                                           
Sbjct: 882  MSFGLTNAPAVFMNLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 941

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 942  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1001

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAP+LTVPDGSGSFVIYSD
Sbjct: 1002 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 1061

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAMIF----------------- 480
            ASKKGLGCVLMQQ KVVAYASRQLKSHEQNYPTHDLELAA++F                 
Sbjct: 1062 ASKKGLGCVLMQQCKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIS 1121

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1122 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1181

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
            QA LHRDLERAEIAVSVGAVTMQL QLTVQ TLRQRIIGAQSNDPYLVEKRGLAEAGQAE
Sbjct: 1182 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQSTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 1241

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
            GFSISSDGGL FERRLCV SDS IKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1242 GFSISSDGGLAFERRLCVPSDSVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1301

[Close]

BLAST of Cmc02g0047741 vs. ExPASy TrEMBL
Match: A0A5A7T0Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00570 PE=4 SV=1)

HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 588/657 (89.50%), Postives = 593/657 (90.26%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 341 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 400

Query: 61  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP TVPI
Sbjct: 401 SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPDTVPI 460

Query: 121 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 461 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 520

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
           VTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRIKDGDVPKT FRSRYGHYEFIV
Sbjct: 521 VTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 580

Query: 241 MSFGLTNAPAVFMDLMNS---------------------------------VSFLGHVVS 300
           MSFGLTNAPAVFMDLMN                                  VSFLGHVVS
Sbjct: 581 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVSFLGHVVS 640

Query: 301 KAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 360
           KAGVSVDPAKIEAVTGWTRPSTVSE RSFLGLAGYYRRFVENFS IATPLTQLTRKGAPF
Sbjct: 641 KAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIATPLTQLTRKGAPF 700

Query: 361 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ 420
           VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ
Sbjct: 701 VWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQ 760

Query: 421 LKSHEQNYPTHDLELAAM-----------------IFTDHKSLKYFFTQKELNMRQRRWL 480
           LKSHEQNYPTHDLELAA+                 IFTDHKSLKYFFTQKELNMRQRRWL
Sbjct: 761 LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL 820

Query: 481 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAQLHRDLERAEIAVSVGAVTMQ 540
           ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQA LHRDLERAEIAVSVGAVTMQ
Sbjct: 821 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQ 880

Query: 541 LNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGGLVFERRLCVSSDSA 600
           L QLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FS+SSDGGL+FERRLCV SDSA
Sbjct: 881 LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSA 940

Query: 601 IKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPR 608
           +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF SRCLVCQQVKAPR
Sbjct: 941 VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCLVCQQVKAPR 997

[Close]

BLAST of Cmc02g0047741 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 591/680 (86.91%), Postives = 596/680 (87.65%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 488  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 547

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREVDVSLS EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 548  SQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 607

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 608  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 667

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRSRYGHYEFIV
Sbjct: 668  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 727

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFMDLMN                                           
Sbjct: 728  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNK 787

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 788  LYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 847

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 848  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 907

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAM-----------------IF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+                 IF
Sbjct: 908  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 967

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 968  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1027

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
            QA LHRDLERAEIAVSVGAVTMQL QLTVQPTLRQRII AQSNDPYLVEKRGLAE GQA 
Sbjct: 1028 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAV 1087

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
             FS+SSDGGL+FERRLCV SDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1088 EFSLSSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1147

[Close]

BLAST of Cmc02g0047741 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1142.9 bits (2955), Expect = 0.0e+00
Identity = 589/680 (86.62%), Postives = 595/680 (87.50%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRSRYGHYEFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNAPAVFMDLMN------------------------------------------- 300
            MSFGLTNAPAVFMDLMN                                           
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  -------------SVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
                          VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAM-----------------IF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+                 IF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 541  QAQLHRDLERAEIAVSVGAVTMQLNQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAE 600
            QA LHRDLERAEIAVSVGAVTMQL QLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 601  GFSISSDGGLVFERRLCVSSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 608
             FS+SSDGGL+FERRLCV SDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK
Sbjct: 1308 EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1367

[Close]

BLAST of Cmc02g0047741 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 3.7e-21
Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 259 VSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATP 318
           +++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  P
Sbjct: 30  IAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRP 89

Query: 319 LTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 361
           LT+L +K +   W++    +F+ LK  + T PVL +PD    FV
Sbjct: 90  LTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc02g0047741 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040188.1	0.0e+00	87.65	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053368.1	0.0e+00	87.06	pol protein [Cucumis melo var. makuwa]	[more]
KAA0036553.1	0.0e+00	89.50	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	0.0e+00	86.91	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01613.1	0.0e+00	86.62	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0047741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	1.9e-62	33.82	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	7.2e-62	30.75	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	1.2e-61	26.66	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-61	26.66	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-61	26.66	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0047741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TB42	0.0e+00	87.65	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11...	[more]
A0A5A7UE75	0.0e+00	87.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold42...	[more]
A0A5A7T0Y9	0.0e+00	89.50	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]
A0A5A7T190	0.0e+00	86.91	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5D3BPI1	0.0e+00	86.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]

BLAST of Cmc02g0047741 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.7e-21	46.15	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..38 e-value: 3.4E-6 score: 28.7
None	No IPR available	PFAM	PF08284	RVP_2	coord: 2..31 e-value: 9.3E-9 score: 35.2
None	No IPR available	GENE3D	1.10.340.70		coord: 515..604 e-value: 1.9E-17 score: 65.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 108..247 e-value: 1.4E-65 score: 222.5
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..229
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 1..229 coord: 261..463
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 261..463
None	No IPR available	CDD	cd01647	RT_LTR	coord: 146..274 e-value: 2.44312E-60 score: 196.662
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 360..458 e-value: 6.28152E-45 score: 153.417
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 329..419 e-value: 1.2E-25 score: 89.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 162..260 e-value: 1.0E-10 score: 41.5
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 549..605 e-value: 2.9E-17 score: 62.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 276..366 e-value: 6.5E-31 score: 108.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..262 e-value: 1.4E-65 score: 222.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 86..442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0047741.1	Cmc02g0047741.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding