Cmc02g0047451 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0047451
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description50S ribosomal protein L35
LocationCMiso1.1chr02: 13025404 .. 13027716 (+)
RNA-Seq ExpressionCmc02g0047451
SyntenyCmc02g0047451
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAATAAAATCGCTTCACTTTATCCAAAGAGCAGGCCAAGTCTGAGGCTCGTAGAGATTGGTAAGAAGAAGAAGAAGAAGAAAGTCGAGACGCTTCGAAACTTCAGAAGCTATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTCAACAAGGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCTATCTCACATTTCTCCCACTTCTCAAATTCATACTCCTTTTACTGTCTTCGCTGCTAAAGGCTACAAAATGAAAACACACAAGGTCTCTCCACCACTCTCTCTTCTCTATATTTTTGTATGGTTTAATTCTGGTTGGATTCTGATTAATTTGAAGCTAATTTCAGTCTTCTAGATAGTTTGAACATGTTTGATTGTTTATTGTAAATGAATTTGTATTATGATTCGAGAATGGCATGTTGAATTTTAAATACCCTTTAAATTACCCAATTCTAGACGCTTACTGAATGAACTAATATCATCATGAATTGTTGAACAATACGAGTCTGTCTTCTCTGTTTTTTTCTGGGATTTTTCCCTTTTTATTTTGATTTTATTGTTTTGTCTTACTGTTTAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTCTCCAAACTGGTATGTCTTCTTAATTTATTTTTATGTTCATTATTCTGTATTTGTTATGCGGCATTTCTAAACTTAGGTCCTTGAGTTTTTCTGGGAAAGGTTTTATATAAATGGTCAAAACTTAGCCAATGTAGCCACTATTTTCAATCCCTATGATTCTTCTATAAGCGATCTACCAATTTCCCTCTCTTGAATGCAAGTTATCAAAGTAGTTCAGTGAAGAATCTTACCGAAGTTGGAATGTACTTCATCATTTGATTCAATGATTTCAATCCCGATCATATTGTCAGCTAATGACCTGCATTCCAACTCAATTAACTTTGTTTTGGAAGTATGATTTAATTTGAAGTTTATTTATCGGTTGTCATGGTTTGTTCAGACAATAATCCCCAGAGCTATGTCGATGGTGATCTTGAAGATGTTCACATAGATCATTTAGGAAACAAGTTTTGTTTCGTTTTGATATTCTTAAGTGCCCAAGACCTTATCCAGGAACCCCAAGCGCAAGAAAATATAGCTTCAACATACCTTTGGTTTTGGATCTTCAAAATTTTGTACACTAGCTAGTGTTGATTGGTTTTTTATTGGTTGCTTCTGACTCAGAAATGGATAACCAATGCAAGGGGGGATATTAAGGATACAATTTTCTTCAGACCTTGAACATTTTGGAGTAAGGGGTTCAAGAGACAAGATGACTTTTTTCCTATCACTTTCTCAGTTGATTTCTTGTAGTTGGAATGATGTCTTAGTCTGTAAAGCAGTTCCATGTGGCCTTTTGTTCAAATCTGATTCCATCTTGATTGTTACTGTCTGGTTTAGTCTTCTGATTTTCCCTGAGCACATAGACATTTTCTGTTTCTATCACGTAGCATATAGTTAGTAAACTCTTAGATCAACAGAATACATCACCTAGGAATTCCTTTTACCAACGATATTCACACATAAGATTCTGATACAAACACAAACTTCCTTGATATACAATGATCTGAGCGTTTTATCCAGCCTCATCAATTGACAATGCAAAATGAAGGTAAGAAGTCTGACGAGGAAAATGATTTCCGTCATTTGTTTTGTTGAATGATGATCGCTGGAAAATTCTCATGCAGTTATTCTATCTCTAGTTCTGTTACTCAGTGTTTTCTTGATTGGTTTATGTCTTAACACAGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAGGTGAATAGGCAGGCCCAGTAGAAGTGATCTTGGGATCTTGCCTGTACTTAACTTCATTTTGTAACCAAATGATTTTCAATTTTCCAGAACTCATCAAAGGGCAAAGTTTGATTGCTTAAAAATATTATTTGTTCTATTTATTCCCTCAGTTGATAATGGTACCTACAACCTTCTTTCAGTTCCTTTCCTCTATTGTTGGCTACAAAATGCAGCTTATTTCTTCTGTAAATTATGAGTACCTTAGAGGGTTCTTTTGCCCATATGGAAAATATCTGGTTTGTTTGCTTAGTTTTATCT

mRNA sequence

TGAAATAAAATCGCTTCACTTTATCCAAAGAGCAGGCCAAGTCTGAGGCTCGTAGAGATTGGTAAGAAGAAGAAGAAGAAGAAAGTCGAGACGCTTCGAAACTTCAGAAGCTATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTCAACAAGGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCTATCTCACATTTCTCCCACTTCTCAAATTCATACTCCTTTTACTGTCTTCGCTGCTAAAGGCTACAAAATGAAAACACACAAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTCTCCAAACTGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAGGTGAATAGGCAGGCCCAGTAGAAGTGATCTTGGGATCTTGCCTGTACTTAACTTCATTTTGTAACCAAATGATTTTCAATTTTCCAGAACTCATCAAAGGGCAAAGTTTGATTGCTTAAAAATATTATTTGTTCTATTTATTCCCTCAGTTGATAATGGTACCTACAACCTTCTTTCAGTTCCTTTCCTCTATTGTTGGCTACAAAATGCAGCTTATTTCTTCTGTAAATTATGAGTACCTTAGAGGGTTCTTTTGCCCATATGGAAAATATCTGGTTTGTTTGCTTAGTTTTATCT

Coding sequence (CDS)

ATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTCAACAAGGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCTATCTCACATTTCTCCCACTTCTCAAATTCATACTCCTTTTACTGTCTTCGCTGCTAAAGGCTACAAAATGAAAACACACAAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCATTTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTCTCCAAACTGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAGGTGAATAGGCAGGCCCAGTAG

Protein sequence

MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKLSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Homology
[Close]
BLAST of Cmc02g0047451 vs. NCBI nr
Match: XP_008443834.1 (PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 5.7e-74
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK 
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKP 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR
Sbjct: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Sbjct: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 151

[Close]
BLAST of Cmc02g0047451 vs. NCBI nr
Match: KAA0035109.1 (50S ribosomal protein L35 [Cucumis melo var. makuwa] >TYJ95970.1 50S ribosomal protein L35 [Cucumis melo var. makuwa])

HSP 1 Score: 278.9 bits (712), Expect = 2.6e-71
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR
Sbjct: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLK 146
           LRLSKLHPVSRSDYDNVIGALPYLK
Sbjct: 121 LRLSKLHPVSRSDYDNVIGALPYLK 145

[Close]
BLAST of Cmc02g0047451 vs. NCBI nr
Match: XP_004146668.1 (50S ribosomal protein L35, chloroplastic [Cucumis sativus] >KGN65186.1 hypothetical protein Csa_019888 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVSFGLRFSPLCSRPSFRVSHTSVG+AS NKVNSLKLSSSHNISGFG N LQK 
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGIASVNKVNSLKLSSSHNISGFGFNSLQKP 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPTSQI TPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLL KKNAKRR
Sbjct: 61  SHISPTSQIRTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLCKKNAKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           LRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Sbjct: 121 LRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ 151

[Close]
BLAST of Cmc02g0047451 vs. NCBI nr
Match: XP_038878434.1 (50S ribosomal protein L35, chloroplastic [Benincasa hispida])

HSP 1 Score: 261.5 bits (667), Expect = 4.4e-66
Identity = 138/151 (91.39%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVS GLRFSPL SRPS RVSH+SVGLASFNK NSLKLSSS+NISGFG+ FLQK 
Sbjct: 1   MASASMAVSCGLRFSPLYSRPSVRVSHSSVGLASFNKGNSLKLSSSNNISGFGVTFLQKP 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPT QIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKN KRR
Sbjct: 61  SHISPTPQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Sbjct: 121 LRLSKMHPVSRSDYDNVIGALPYLKVNRQAK 151

[Close]
BLAST of Cmc02g0047451 vs. NCBI nr
Match: XP_022135558.1 (50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 244.2 bits (622), Expect = 7.2e-61
Identity = 130/152 (85.53%), Postives = 137/152 (90.13%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQK 60
           MASAS  VSFGLRFSPLCSRPS RVSH SV LA SFNKVNSL+L SS NISGFG+  LQK
Sbjct: 1   MASASTTVSFGLRFSPLCSRPSVRVSHGSVRLASSFNKVNSLRLGSSPNISGFGVALLQK 60

Query: 61  LSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKR 120
             HI+PTSQ+HTP TV AAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKN KR
Sbjct: 61  SFHIAPTSQVHTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKR 120

Query: 121 RLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           +LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Sbjct: 121 KLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK 152

[Close]
BLAST of Cmc02g0047451 vs. ExPASy Swiss-Prot
Match: Q8VZ55 (50S ribosomal protein L35, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL35 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.8e-34
Identity = 96/152 (63.16%), Postives = 108/152 (71.05%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK 60
           MAS SMA S  + F       S +VS  +SV  A+        LSSSH+ISG       K
Sbjct: 1   MASLSMA-SVNVSFCHPLRSSSPKVSLRSSVHFAT-------SLSSSHSISGLRAVLPLK 60

Query: 61  LSHI-SPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAK 120
           +S + SP SQ    FTVFA KGYKMKTHKASAKRFRVTGRGKIVRRR+GKQHLL KKN K
Sbjct: 61  ISTVASPNSQKLHSFTVFAHKGYKMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 120

Query: 121 RRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA 151
           R+LRLSK+  V+RSDYDNVIGALPYLKVNR+A
Sbjct: 121 RKLRLSKMTEVNRSDYDNVIGALPYLKVNRKA 144

[Close]
BLAST of Cmc02g0047451 vs. ExPASy Swiss-Prot
Match: P23326 (50S ribosomal protein L35, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL35 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = 0 

Query: 1   MASASMAVSF---GLRFSPLCSRPSFRVSHT-SVGLASFNK--VNSLKLSSSHNISGFGL 60
           MASA+  +SF    L  SP    PS R S    + L  FNK   ++L LSSS +IS   +
Sbjct: 3   MASATATLSFKTPSLSLSP----PSTRCSAAQGISLTHFNKQLKSTLNLSSSSSISSSKV 62

Query: 61  NFL----QKLSHISPTSQIHTP-FTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQ 120
             +    +++S +  +    +P FTVFAAKGYKMKTHKASAKRFRVTG+GKIVRRRAGKQ
Sbjct: 63  QPIVLKNKRISTVDSSVSTSSPSFTVFAAKGYKMKTHKASAKRFRVTGKGKIVRRRAGKQ 122

Query: 121 HLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQ 150
           HLL KKN KR+ RLSKL  V RSDYDNVIGALPYLKVNR+
Sbjct: 123 HLLAKKNTKRKNRLSKLIQVDRSDYDNVIGALPYLKVNRK 158

[Close]
BLAST of Cmc02g0047451 vs. ExPASy Swiss-Prot
Match: Q31NR1 (50S ribosomal protein L35 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmI PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 82  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGAL 141
           K+KT KA+AKRFR++G GK +RR+A K HLL  KNA RR RLS+   V  +D + V   L
Sbjct: 3   KLKTRKAAAKRFRISGNGKAIRRKAFKNHLLQHKNATRRRRLSQPEVVHETDQERVKLML 62

Query: 142 PY 144
           PY
Sbjct: 63  PY 64

[Close]
BLAST of Cmc02g0047451 vs. ExPASy Swiss-Prot
Match: Q5N5F4 (50S ribosomal protein L35 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmI PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0 

Query: 82  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGAL 141
           K+KT KA+AKRFR++G GK +RR+A K HLL  KNA RR RLS+   V  +D + V   L
Sbjct: 3   KLKTRKAAAKRFRISGNGKAIRRKAFKNHLLQHKNATRRRRLSQPEVVHETDQERVKLML 62

Query: 142 PY 144
           PY
Sbjct: 63  PY 64

[Close]
BLAST of Cmc02g0047451 vs. ExPASy Swiss-Prot
Match: Q8YRL9 (50S ribosomal protein L35 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rpmI PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.7e-09
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 82  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGAL 141
           K+KT KA+AKRFR TG GKIVRR+A K HLL  K   ++ + SK+  V+  D +NV   L
Sbjct: 3   KLKTRKAAAKRFRATGTGKIVRRKAFKNHLLEHKTTNKKRQFSKMAIVNERDEENVRLML 62

Query: 142 PYL 145
           PYL
Sbjct: 63  PYL 65

[Close]
BLAST of Cmc02g0047451 vs. ExPASy TrEMBL
Match: A0A1S3B9R8 (50S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103487333 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK 
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKP 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR
Sbjct: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Sbjct: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 151

[Close]
BLAST of Cmc02g0047451 vs. ExPASy TrEMBL
Match: A0A5D3B7R7 (50S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00400 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR
Sbjct: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLK 146
           LRLSKLHPVSRSDYDNVIGALPYLK
Sbjct: 121 LRLSKLHPVSRSDYDNVIGALPYLK 145

[Close]
BLAST of Cmc02g0047451 vs. ExPASy TrEMBL
Match: A0A0A0LYX0 (50S ribosomal protein L35 OS=Cucumis sativus OX=3659 GN=Csa_1G257920 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASASMAVSFGLRFSPLCSRPSFRVSHTSVG+AS NKVNSLKLSSSHNISGFG N LQK 
Sbjct: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGIASVNKVNSLKLSSSHNISGFGFNSLQKP 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
           SHISPTSQI TPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLL KKNAKRR
Sbjct: 61  SHISPTSQIRTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLCKKNAKRR 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           LRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Sbjct: 121 LRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ 151

[Close]
BLAST of Cmc02g0047451 vs. ExPASy TrEMBL
Match: A0A6J1C550 (50S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111007484 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.5e-61
Identity = 130/152 (85.53%), Postives = 137/152 (90.13%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQK 60
           MASAS  VSFGLRFSPLCSRPS RVSH SV LA SFNKVNSL+L SS NISGFG+  LQK
Sbjct: 1   MASASTTVSFGLRFSPLCSRPSVRVSHGSVRLASSFNKVNSLRLGSSPNISGFGVALLQK 60

Query: 61  LSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKR 120
             HI+PTSQ+HTP TV AAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKN KR
Sbjct: 61  SFHIAPTSQVHTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKR 120

Query: 121 RLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           +LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Sbjct: 121 KLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK 152

[Close]
BLAST of Cmc02g0047451 vs. ExPASy TrEMBL
Match: A0A6J1JDG6 (50S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111485794 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 124/151 (82.12%), Postives = 134/151 (88.74%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKL 60
           MASAS +VSFGLRFSPLCSR S RVS  SV L S NK  SL+LSSSHN+S FG+  LQK 
Sbjct: 1   MASASASVSFGLRFSPLCSRSSVRVSRISVRLPSSNKAYSLRLSSSHNVSSFGVALLQKP 60

Query: 61  SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRR 120
            HI+P+S+IHTPFTV AAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKN KR+
Sbjct: 61  FHIAPSSRIHTPFTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRK 120

Query: 121 LRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ 152
           LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Sbjct: 121 LRLSKMHPVSRSDYDNVIGALPYLKVNRQAK 151

[Close]
BLAST of Cmc02g0047451 vs. TAIR 10
Match: AT2G24090.1 (Ribosomal protein L35 )

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-35
Identity = 96/152 (63.16%), Postives = 108/152 (71.05%), Query Frame = 0 

Query: 1   MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK 60
           MAS SMA S  + F       S +VS  +SV  A+        LSSSH+ISG       K
Sbjct: 1   MASLSMA-SVNVSFCHPLRSSSPKVSLRSSVHFAT-------SLSSSHSISGLRAVLPLK 60

Query: 61  LSHI-SPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAK 120
           +S + SP SQ    FTVFA KGYKMKTHKASAKRFRVTGRGKIVRRR+GKQHLL KKN K
Sbjct: 61  ISTVASPNSQKLHSFTVFAHKGYKMKTHKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNK 120

Query: 121 RRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA 151
           R+LRLSK+  V+RSDYDNVIGALPYLKVNR+A
Sbjct: 121 RKLRLSKMTEVNRSDYDNVIGALPYLKVNRKA 144

The following BLAST results are available for this feature:
BLAST of Cmc02g0047451 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443834.15.7e-7499.34PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo][more]
KAA0035109.12.6e-71100.0050S ribosomal protein L35 [Cucumis melo var. makuwa] >TYJ95970.1 50S ribosomal p... [more]
XP_004146668.12.5e-6994.7050S ribosomal protein L35, chloroplastic [Cucumis sativus] >KGN65186.1 hypotheti... [more]
XP_038878434.14.4e-6691.3950S ribosomal protein L35, chloroplastic [Benincasa hispida][more]
XP_022135558.17.2e-6185.5350S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia][more]
BLAST of Cmc02g0047451 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZ557.8e-3463.1650S ribosomal protein L35, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3... [more]
P233261.1e-3258.7550S ribosomal protein L35, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL35 P... [more]
Q31NR13.9e-0954.8450S ribosomal protein L35 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80... [more]
Q5N5F43.9e-0954.8450S ribosomal protein L35 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S... [more]
Q8YRL98.7e-0953.9750S ribosomal protein L35 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576... [more]
BLAST of Cmc02g0047451 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B9R82.8e-7499.3450S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103487333 PE=3 SV=1[more]
A0A5D3B7R71.3e-71100.0050S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0LYX01.2e-6994.7050S ribosomal protein L35 OS=Cucumis sativus OX=3659 GN=Csa_1G257920 PE=3 SV=1[more]
A0A6J1C5503.5e-6185.5350S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111007484 PE=3 SV... [more]
A0A6J1JDG61.2e-5882.1250S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111485794 PE=3 SV=1[more]
BLAST of Cmc02g0047451 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24090.15.6e-3563.16Ribosomal protein L35 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001706Ribosomal protein L35, non-mitochondrialPRINTSPR00064RIBOSOMALL35coord: 100..114
score: 48.25
coord: 82..99
score: 61.11
coord: 115..133
score: 32.08
IPR001706Ribosomal protein L35, non-mitochondrialTIGRFAMTIGR00001TIGR00001coord: 81..143
e-value: 2.0E-22
score: 77.3
IPR001706Ribosomal protein L35, non-mitochondrialPANTHERPTHR3334354S RIBOSOMAL PROTEIN BL35Mcoord: 1..150
IPR001706Ribosomal protein L35, non-mitochondrialHAMAPMF_00514Ribosomal_L35coord: 80..143
score: 15.318585
IPR037229Ribosomal protein L35 superfamilyGENE3D4.10.410.60coord: 82..144
e-value: 3.3E-19
score: 71.2
IPR037229Ribosomal protein L35 superfamilySUPERFAMILY143034L35p-likecoord: 81..143
IPR021137Ribosomal protein L35PFAMPF01632Ribosomal_L35pcoord: 81..137
e-value: 8.7E-19
score: 67.8
NoneNo IPR availablePANTHERPTHR33343:SF350S RIBOSOMAL PROTEIN L35coord: 1..150
IPR018265Ribosomal protein L35, conserved sitePROSITEPS00936RIBOSOMAL_L35coord: 84..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0047451.1Cmc02g0047451.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome